BLASTX nr result
ID: Rehmannia22_contig00027885
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00027885
(464 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea] 84 2e-14
gb|EMJ08780.1| hypothetical protein PRUPE_ppa018489mg, partial [... 84 3e-14
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 81 1e-13
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo... 77 2e-12
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1... 75 7e-12
gb|AAC28197.1| contains similarity to reverse transcriptases [Ar... 75 1e-11
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi... 74 2e-11
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] 74 3e-11
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana] 74 3e-11
gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japo... 73 4e-11
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ... 73 4e-11
gb|EMJ15800.1| hypothetical protein PRUPE_ppa022684mg [Prunus pe... 72 6e-11
gb|AAX95129.1| retrotransposon protein, putative, unclassified [... 72 8e-11
gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japo... 72 8e-11
gb|ABA91837.2| retrotransposon protein, putative, unclassified [... 72 8e-11
gb|AAD22286.1| putative non-LTR retroelement reverse transcripta... 72 8e-11
gb|EMJ25902.1| hypothetical protein PRUPE_ppa025398mg, partial [... 71 2e-10
emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group] 71 2e-10
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta... 71 2e-10
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 71 2e-10
>gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]
Length = 381
Score = 84.0 bits (206), Expect = 2e-14
Identities = 50/139 (35%), Positives = 69/139 (49%)
Frame = -1
Query: 464 IIDHAWNIPVRGTPMFQVSSGIKNCRMTLLNWSKGYRTNSAKTINMCKGRMKVMRHDGGS 285
+I WN + G + VS I+ CR + W K TNSAK I + H
Sbjct: 57 VIIDGWNSTIPGQHV-SVSDRIRKCRHAISQWKKAKNTNSAKRIKALTALIDEA-HSDPL 114
Query: 284 RNWAEWNSLKVILSKAYNDEECFWKQKARISWLKEGDKNSKFFHACTLQRRCNNCIDNLL 105
+E ++L+ L +AY DEE FW+ K+RI WL GD+N +FFHA T RR N I ++
Sbjct: 115 CPLSEIHNLRKELLQAYKDEEAFWRNKSRIQWLTYGDRNIRFFHASTKNRRAKNKILSIQ 174
Query: 104 SSDGVPCLSPKAIEAEVSR 48
++ G K I E R
Sbjct: 175 NNLGEEVFGNKEISKEALR 193
>gb|EMJ08780.1| hypothetical protein PRUPE_ppa018489mg, partial [Prunus persica]
Length = 1146
Score = 83.6 bits (205), Expect = 3e-14
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 5/141 (3%)
Frame = -1
Query: 464 IIDHAWNIPVRGTPMFQVSSGIKNCRMTLLNWSKGYRTNSAKTINMCKGRMKVMRHDGGS 285
II W + G +S+ + CR L WSK N+ IN+ + ++
Sbjct: 163 IIQRGWKNDIVGDSFAALSANLGVCREELQKWSKEKFPNNLSRINLLMKSLSNLQSGPLE 222
Query: 284 RNW-----AEWNSLKVILSKAYNDEECFWKQKARISWLKEGDKNSKFFHACTLQRRCNNC 120
N+ A W+ + V+ S+ EE +WKQ++R++WL GD N+KFFH TLQRR N
Sbjct: 223 ENYRHQESAIWDEMSVLWSR----EETYWKQRSRLNWLSAGDANTKFFHTTTLQRRQRNK 278
Query: 119 IDNLLSSDGVPCLSPKAIEAE 57
I+ LL S+G +AI E
Sbjct: 279 IETLLKSEGNCISGDQAIREE 299
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 81.3 bits (199), Expect = 1e-13
Identities = 47/124 (37%), Positives = 61/124 (49%)
Frame = -1
Query: 461 IDHAWNIPVRGTPMFQVSSGIKNCRMTLLNWSKGYRTNSAKTINMCKGRMKVMRHDGGSR 282
I WN+ G Q + NCR + W K +TI K + V + D R
Sbjct: 40 ISQGWNLD-SGFREGQFVEKLTNCRRAISKWRKSLIPFGRQTIEDLKAELDVAQRDD-DR 97
Query: 281 NWAEWNSLKVILSKAYNDEECFWKQKARISWLKEGDKNSKFFHACTLQRRCNNCIDNLLS 102
+ E L + L +AY DEE +W QK+R W+K GD NSKFFHA T QRR N I L
Sbjct: 98 SREEITELTLRLKEAYRDEEQYWYQKSRSLWMKLGDNNSKFFHALTKQRRARNRITGLHD 157
Query: 101 SDGV 90
+G+
Sbjct: 158 ENGI 161
>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
Length = 1494
Score = 77.0 bits (188), Expect = 2e-12
Identities = 39/112 (34%), Positives = 64/112 (57%)
Frame = -1
Query: 380 LLNWSKGYRTNSAKTINMCKGRMKVMRHDGGSRNWAEWNSLKVILSKAYNDEECFWKQKA 201
L WS+ N K+I C+ ++ MR G + + + LK+ L + + EE +WKQ++
Sbjct: 533 LKRWSRDKIGNIKKSIERCRRELEEMRMRGREDSEPDVHRLKIFLQELLHREEIWWKQRS 592
Query: 200 RISWLKEGDKNSKFFHACTLQRRCNNCIDNLLSSDGVPCLSPKAIEAEVSRN 45
RI+WLKEGD+N+++FH R N I L SDG+ C + + E++R+
Sbjct: 593 RITWLKEGDRNTRYFHLKASWRARKNLIKKLRRSDGMMCSKEEEL-GEIARS 643
>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
Arabidopsis thaliana retrotransposon Ta11-1
gi|976278|gb|AAA75254.1| reverse transcriptase
[Arabidopsis thaliana]
Length = 1333
Score = 75.5 bits (184), Expect = 7e-12
Identities = 45/124 (36%), Positives = 61/124 (49%)
Frame = -1
Query: 461 IDHAWNIPVRGTPMFQVSSGIKNCRMTLLNWSKGYRTNSAKTINMCKGRMKVMRHDGGSR 282
I AWN R + V +K+CR L W K NS+ I + +++ + G R
Sbjct: 258 IVQAWNGSQRNENLL-VLDKLKHCRSALSRWKKENNINSSTRITQARAALELEQSSGFPR 316
Query: 281 NWAEWNSLKVILSKAYNDEECFWKQKARISWLKEGDKNSKFFHACTLQRRCNNCIDNLLS 102
+ SLK L KA +DEE FW QK+R W+ GDKN+ FFHA R ID L
Sbjct: 317 ADLVF-SLKNDLCKANHDEEVFWSQKSRAKWMHSGDKNTSFFHASVKDNRGKQHIDQLCD 375
Query: 101 SDGV 90
+G+
Sbjct: 376 VNGL 379
>gb|AAC28197.1| contains similarity to reverse transcriptases [Arabidopsis
thaliana] gi|7267156|emb|CAB77868.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 1077
Score = 74.7 bits (182), Expect = 1e-11
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Frame = -1
Query: 434 RGTPMFQVSSGIKNCRMTLLNWSKGYRTNSAKTINMCKGRMK-VMRHDGGSRNWAEWNSL 258
+ P +V + CR LLNWSK + NS K I + +++ + D +++ + +
Sbjct: 240 KSNPSAKVDYRLHLCRAALLNWSKEHHLNSQKEILSLRVQLEEALTDDAATQDSVDLLNQ 299
Query: 257 KVILSKAYNDEECFWKQKARISWLKEGDKNSKFFHACTLQRRCNNCIDNLLSSDGVPCLS 78
++L AY EE FWKQ++R WL GDKNS FFHA T RR N I + +S G
Sbjct: 300 NLLL--AYRKEETFWKQRSRNLWLALGDKNSCFFHAATNSRRAINTISVIENSAGTSVYE 357
Query: 77 PKAIEAEVS 51
I +S
Sbjct: 358 DSEIIETIS 366
>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 73.9 bits (180), Expect = 2e-11
Identities = 43/140 (30%), Positives = 75/140 (53%)
Frame = -1
Query: 464 IIDHAWNIPVRGTPMFQVSSGIKNCRMTLLNWSKGYRTNSAKTINMCKGRMKVMRHDGGS 285
+I AW + + + ++ +K L++WSK N K I + ++ +R+ G
Sbjct: 213 VIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKDKIGNVRKKIKDLREKLGELRNIGLL 272
Query: 284 RNWAEWNSLKVILSKAYNDEECFWKQKARISWLKEGDKNSKFFHACTLQRRCNNCIDNLL 105
E +S+K L + + EE +WKQ++RI+WLKEGD N+++FH R N I L
Sbjct: 273 DTDNEVHSVKKELEEMLHREEIWWKQRSRITWLKEGDLNTRYFHLKASWRAKKNKIKKLK 332
Query: 104 SSDGVPCLSPKAIEAEVSRN 45
+DG ++ K ++ E+SR+
Sbjct: 333 KNDGSTTMNKKEMK-EISRS 351
>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
Length = 1270
Score = 73.6 bits (179), Expect = 3e-11
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Frame = -1
Query: 461 IDHAWNIPVRGTPMFQVSSGIKNCRMTLLNWSKGYRTNSAKTINMCKGRMKVMRHDGGSR 282
I W+ GT + V+ ++ CR +L +W K NS IN + ++ + S
Sbjct: 219 IIRTWSRGKHGTNI-SVADRLRACRKSLSSWKKQNNLNSLDKINQLEAALEKEQ----SL 273
Query: 281 NWAEWNSLKVI---LSKAYNDEECFWKQKARISWLKEGDKNSKFFHACTLQRRCNNCIDN 111
W + + V+ L+KAY +EE +WKQK+R WL+ G++NSK+FHA Q R I+
Sbjct: 274 VWPIFQRVSVLKKDLAKAYREEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEK 333
Query: 110 LLSSDG 93
L +G
Sbjct: 334 LKDVNG 339
>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
Length = 1254
Score = 73.6 bits (179), Expect = 3e-11
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Frame = -1
Query: 461 IDHAWNIPVRGTPMFQVSSGIKNCRMTLLNWSKGYRTNSAKTINMCKGRMKVMRHDGGSR 282
I W+ GT + V+ ++ CR +L +W K NS IN + ++ + S
Sbjct: 222 IIRTWSRGKHGTNI-SVADRLRACRKSLSSWKKQNNLNSLDKINQLEAALEKEQ----SL 276
Query: 281 NWAEWNSLKVI---LSKAYNDEECFWKQKARISWLKEGDKNSKFFHACTLQRRCNNCIDN 111
W + + V+ L+KAY +EE +WKQK+R WL+ G++NSK+FHA Q R I+
Sbjct: 277 VWPIFQRVSVLKKDLAKAYREEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEK 336
Query: 110 LLSSDG 93
L +G
Sbjct: 337 LKDVNG 342
>gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japonica Group]
Length = 1076
Score = 72.8 bits (177), Expect = 4e-11
Identities = 42/140 (30%), Positives = 75/140 (53%)
Frame = -1
Query: 464 IIDHAWNIPVRGTPMFQVSSGIKNCRMTLLNWSKGYRTNSAKTINMCKGRMKVMRHDGGS 285
+I AW + + + ++ +K L++WSK N K I + ++ +R+ G
Sbjct: 19 VIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKDKIGNVRKKIKDLREKLGELRNIGLL 78
Query: 284 RNWAEWNSLKVILSKAYNDEECFWKQKARISWLKEGDKNSKFFHACTLQRRCNNCIDNLL 105
E +S+K L + + EE +WKQ++RI+WLKEGD N+++FH R N I L
Sbjct: 79 DTDNEVHSVKKELEEMLHREEIWWKQRSRITWLKEGDLNTRYFHLKASWRAKKNKIKKLK 138
Query: 104 SSDGVPCLSPKAIEAEVSRN 45
+DG ++ K ++ E++R+
Sbjct: 139 KNDGSTTMNKKEMK-EINRS 157
>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 72.8 bits (177), Expect = 4e-11
Identities = 42/140 (30%), Positives = 75/140 (53%)
Frame = -1
Query: 464 IIDHAWNIPVRGTPMFQVSSGIKNCRMTLLNWSKGYRTNSAKTINMCKGRMKVMRHDGGS 285
+I AW + + + ++ +K L++WSK N K I + ++ +R+ G
Sbjct: 238 VIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKDKIGNVRKKIKDLREKLGELRNIGLL 297
Query: 284 RNWAEWNSLKVILSKAYNDEECFWKQKARISWLKEGDKNSKFFHACTLQRRCNNCIDNLL 105
E +S+K L + + EE +WKQ++RI+WLKEGD N+++FH R N I L
Sbjct: 298 DTDNEVHSVKKELEEMLHREEIWWKQRSRITWLKEGDLNTRYFHLKASWRAKKNKIKKLK 357
Query: 104 SSDGVPCLSPKAIEAEVSRN 45
+DG ++ K ++ E++R+
Sbjct: 358 KNDGSTTMNKKEMK-EINRS 376
>gb|EMJ15800.1| hypothetical protein PRUPE_ppa022684mg [Prunus persica]
Length = 696
Score = 72.4 bits (176), Expect = 6e-11
Identities = 41/125 (32%), Positives = 70/125 (56%)
Frame = -1
Query: 464 IIDHAWNIPVRGTPMFQVSSGIKNCRMTLLNWSKGYRTNSAKTINMCKGRMKVMRHDGGS 285
+++ AWN+ + + + +S ++NC+ L WS N+ K I+ ++ ++
Sbjct: 352 VVNLAWNMRSGVSGISRWNSCLRNCKRDLKKWSTIRFPNNHKLIHQLMQVLETAQNQSPP 411
Query: 284 RNWAEWNSLKVILSKAYNDEECFWKQKARISWLKEGDKNSKFFHACTLQRRCNNCIDNLL 105
AE ++ LS+A+N+EE +WKQ+ I+WLK GD +S+FFH T QRR N + L
Sbjct: 412 CLEAE-KTICDHLSEAWNNEEAYWKQRPHINWLKGGDADSRFFHLSTTQRRRKNRVLRLE 470
Query: 104 SSDGV 90
+GV
Sbjct: 471 DDNGV 475
>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|62733115|gb|AAX95232.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 1324
Score = 72.0 bits (175), Expect = 8e-11
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Frame = -1
Query: 464 IIDHAWNIPVRGTPMFQVSSGIKNCRMTLLNWSKGYRTNSAKTINMCKGRMKVMRHDGGS 285
I+++AW + V G +V I+ L +WSK + + K I K ++ R S
Sbjct: 709 IVENAWKLSV-GPRGGKVMDAIREVAANLWDWSKNFLGDLEKRIKKAKQALEAHRRSPIS 767
Query: 284 RNWAEWNS-LKVILSKAYNDEECFWKQKARISWLKEGDKNSKFFHACTLQRRCNNCIDNL 108
+ A + LK L K E +W+Q+A WL++GD+N+KFFH C +R+ N I L
Sbjct: 768 SSTASREAVLKYRLDKLEEQRELYWRQRANQHWLEKGDRNTKFFHECASERKKRNKIKKL 827
Query: 107 LSSDG 93
DG
Sbjct: 828 RRDDG 832
>gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japonica Group]
Length = 825
Score = 72.0 bits (175), Expect = 8e-11
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Frame = -1
Query: 464 IIDHAWNIPVRGTPMFQVSSGIKNCRMTLLNWSKGYRTNSAKTINMCKGRMKVMRHDGGS 285
I+++AW + V G +V I+ L +WSK + + K I K ++ R S
Sbjct: 210 IVENAWKLSV-GPRGGKVMDAIREVAANLWDWSKNFLGDLEKRIKKAKQALEAHRRSPIS 268
Query: 284 RNWAEWNS-LKVILSKAYNDEECFWKQKARISWLKEGDKNSKFFHACTLQRRCNNCIDNL 108
+ A + LK L K E +W+Q+A WL++GD+N+KFFH C +R+ N I L
Sbjct: 269 SSTASREAVLKYRLDKLEEQRELYWRQRANQHWLEKGDRNTKFFHECASERKKRNKIKKL 328
Query: 107 LSSDG 93
DG
Sbjct: 329 RRDDG 333
>gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1301
Score = 72.0 bits (175), Expect = 8e-11
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Frame = -1
Query: 464 IIDHAWNIPVRGTPMFQVSSGIKNCRMTLLNWSKGYRTNSAKTINMCKGRMKVMRHDGGS 285
I+++AW + V G +V I+ L +WSK + + K I K ++ R S
Sbjct: 686 IVENAWKLSV-GPRGGKVMDAIREVAANLWDWSKNFLGDLEKRIKKAKQALEAHRRSPIS 744
Query: 284 RNWAEWNS-LKVILSKAYNDEECFWKQKARISWLKEGDKNSKFFHACTLQRRCNNCIDNL 108
+ A + LK L K E +W+Q+A WL++GD+N+KFFH C +R+ N I L
Sbjct: 745 SSTASREAVLKYRLDKLEEQRELYWRQRANQHWLEKGDRNTKFFHECASERKKRNKIKKL 804
Query: 107 LSSDG 93
DG
Sbjct: 805 RRDDG 809
>gb|AAD22286.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1311
Score = 72.0 bits (175), Expect = 8e-11
Identities = 47/134 (35%), Positives = 66/134 (49%)
Frame = -1
Query: 452 AWNIPVRGTPMFQVSSGIKNCRMTLLNWSKGYRTNSAKTINMCKGRMKVMRHDGGSRNWA 273
+WN + T V I CR +++ WSK + NS I + +++ S
Sbjct: 574 SWNSNLSAT----VDHRIFACRSSIILWSKQHHLNSQVEIFTLREQLEDEISSNSSPQ-E 628
Query: 272 EWNSLKVILSKAYNDEECFWKQKARISWLKEGDKNSKFFHACTLQRRCNNCIDNLLSSDG 93
E +S+ L AY E+ FWKQ++R WL GDKNS FFHA T RR N I + SS G
Sbjct: 629 EIDSINTRLLSAYQREKAFWKQRSRNLWLALGDKNSGFFHAATKNRRAINNIAVIESSAG 688
Query: 92 VPCLSPKAIEAEVS 51
+P I + +S
Sbjct: 689 LPVYEEDEIVSAIS 702
>gb|EMJ25902.1| hypothetical protein PRUPE_ppa025398mg, partial [Prunus persica]
Length = 320
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = -1
Query: 464 IIDHAWNIPVRGTPMFQVSSGIKNCRMTLLNWSKGYRTNSAKTINMCKGRMKVMRHDGGS 285
II +AWN GT M+QV IK R+ L+ W + + I + ++ V+ S
Sbjct: 12 IIANAWNTSFTGTLMYQVCEKIKTTRIQLMQWQRSMFGTTKAEIQRVRSQLDVVWRQPNS 71
Query: 284 RNW-AEWNSLKVILSKAYNDEECFWKQKARISWLKEGDKNSK 162
N A ++ L L + EE FWKQ++++SWLKEGD+N++
Sbjct: 72 ENTTATYHLLMSQLDSLLSREEAFWKQRSKVSWLKEGDRNTR 113
>emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group]
Length = 1205
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/95 (36%), Positives = 54/95 (56%)
Frame = -1
Query: 380 LLNWSKGYRTNSAKTINMCKGRMKVMRHDGGSRNWAEWNSLKVILSKAYNDEECFWKQKA 201
L WS+ N K+I C+ ++ MR G + + + LK+ L + + EE +WKQ++
Sbjct: 311 LKRWSRDKIGNIKKSIERCRRELEEMRMRGREDSEPDVHRLKIFLQELLHREEIWWKQRS 370
Query: 200 RISWLKEGDKNSKFFHACTLQRRCNNCIDNLLSSD 96
RI+WLKEGD+N+++FH R N I L SD
Sbjct: 371 RITWLKEGDRNTRYFHLKASWRARKNLIKKLRRSD 405
>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1138
Score = 70.9 bits (172), Expect = 2e-10
Identities = 41/110 (37%), Positives = 56/110 (50%)
Frame = -1
Query: 461 IDHAWNIPVRGTPMFQVSSGIKNCRMTLLNWSKGYRTNSAKTINMCKGRMKVMRHDGGSR 282
I AWN R M QV +K CR L W + +NS I+ + +++ + G R
Sbjct: 222 IQQAWNGNQRVGGM-QVLERLKKCRSALSRWKQENNSNSLTCISQARAALELEQSSGFPR 280
Query: 281 NWAEWNSLKVILSKAYNDEECFWKQKARISWLKEGDKNSKFFHACTLQRR 132
+ + +LK L KA DEE FW QK+R W+ GDKN+ FFHA R
Sbjct: 281 SKVVF-TLKNDLCKANQDEETFWSQKSRAKWMHGGDKNTSFFHASVKDNR 329
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Frame = -1
Query: 401 IKNCRMTLLNWSKGYRTNSAKTINMCKGRMKVMRHDGGSR----NWAEWNSLKVILSKAY 234
I +CR + W + + +SA I + ++ D ++ + E LK LS+ Y
Sbjct: 275 IASCRREISKWKRVSKPSSAVRIQELQFKL-----DAATKQIPFDRRELARLKKELSQEY 329
Query: 233 NDEECFWKQKARISWLKEGDKNSKFFHACTLQRRCNNCIDNLLSSDG 93
N+EE FW++K+RI W++ GD+N+K+FHA T RR N I L+ +G
Sbjct: 330 NNEEQFWQEKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEG 376