BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00027737
         (1772 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621...   271   5e-70
gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers...   269   3e-69
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   267   1e-68
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626...   266   2e-68
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A...   266   2e-68
ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622...   261   9e-67
ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298...   259   3e-66
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...   259   3e-66
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...   259   3e-66
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A...   259   3e-66
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A...   259   3e-66
ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein A...   259   3e-66
gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [...   258   6e-66
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta...   258   8e-66
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   258   8e-66
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   256   2e-65
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   256   2e-65
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...   255   5e-65
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...   255   5e-65
gb|EEC74955.1| hypothetical protein OsI_10942 [Oryza sativa Indi...   253   2e-64

>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
          Length = 2303

 Score =  271 bits (694), Expect = 5e-70
 Identities = 150/406 (36%), Positives = 229/406 (56%), Gaps = 9/406 (2%)
 Frame = -3

Query: 1770 LNRLNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATES 1591
            L+++N+W++K  SS GKEI+IKAV  A+P + MS FKLP GLC+E+   +A+FWWG+ + 
Sbjct: 750  LSKINNWQHKMFSSGGKEILIKAVAQAVPAYAMSVFKLPKGLCEEIQSEIAKFWWGS-KK 808

Query: 1590 DKRKIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFP 1411
            DKR IHW  WD L+ +K  GGLGF+D   FN A+++KQ WR++  PN LVSKVL+ARYF 
Sbjct: 809  DKRGIHWARWDKLSCAKSRGGLGFRDFISFNQAMVAKQGWRLIQFPNSLVSKVLRARYFK 868

Query: 1410 KGSLMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLT- 1234
              S +D   G+N S++WRS +  R V++ G  + I NG +I ++   WI     F+P++ 
Sbjct: 869  SCSFLDAKPGSNPSFIWRSILWGRQVIQKGARWRIGNGSNILVYKDNWIPRPDTFKPISP 928

Query: 1233 -KMPKDQSPFWVSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLWWNFEK 1057
              +P D +   V EL+  D  +WNV  +++ F  ED   I  + +   Q+ D++ W+++K
Sbjct: 929  PTLPIDTT---VGELMD-DENNWNVAKLNQHFMQEDTEAILKIPLPRSQKVDEMMWHYDK 984

Query: 1056 KGAFTVKSAYSEAIKKFRILEGRAECSYTTENLKTMCKRSWNVKTKGKIKHFIWKCFSKC 877
             G ++VKS Y  A+K    L+   E S +  N K   K  W+++   K+K F+W+     
Sbjct: 985  HGEYSVKSGYQIALK----LKAPDEPSNSGSNSKRW-KAVWSMELPEKMKIFMWRAARNL 1039

Query: 876  LPTSDQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIW-------RIAPIKWDGIE 718
            LPT++ L  R C  DPIC  C  E ET  H    C  A+ IW       +I+  +   I 
Sbjct: 1040 LPTAENLWKRKCLKDPICQGCNREVETVRHALLDCKAARKIWYHATSSVQISNAQNQDIL 1099

Query: 717  KYNGSFFEWWGKICDLKKDEMSEFRIQLTTYILWWLWKSRNLWMFQ 580
            ++    +  WGK            + + T    W +W +RN  +F+
Sbjct: 1100 EFIYEVWSTWGKT-----------KAEQTIAFCWAIWFARNKRIFE 1134


>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score =  269 bits (687), Expect = 3e-69
 Identities = 151/421 (35%), Positives = 235/421 (55%), Gaps = 5/421 (1%)
 Frame = -3

Query: 1767 NRLNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATESD 1588
            ++L+ W +K LS  GKEIM+KAV  A+PVF MSCFKLP   C  L   MA FWW A +  
Sbjct: 622  SKLSSWFSKSLSQGGKEIMLKAVAMAMPVFAMSCFKLPKTTCTNLASAMADFWWSANDH- 680

Query: 1587 KRKIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFPK 1408
            +RKIHW SW+ L   K+ GGLGF+D+ +FN AL++KQ WR++  P+ L ++++K+RYFP 
Sbjct: 681  QRKIHWLSWEKLCLPKEHGGLGFRDIGLFNQALLAKQAWRLLQFPDCLFARLIKSRYFPV 740

Query: 1407 GSLMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLTKM 1228
            G  +D DVG+  S+ WRS +  R ++  GL   + NGKSIR+W   W+ D+ L  P  K 
Sbjct: 741  GEFLDSDVGSRPSFGWRSILHGRDLLCRGLVKRVGNGKSIRVWIDYWLDDNGLRAPWIKN 800

Query: 1227 PKDQSPFWVSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLW-WNFEKKG 1051
            P       VS+LI  + + W ++ +++ F  +D  KI+  +       D  W W   K G
Sbjct: 801  PIINVDLLVSDLIDYEKRDWRLDKLEEQFFPDDVVKIR--ENRPVVSLDDFWIWKHNKSG 858

Query: 1050 AFTVKSAYSEAI-KKFRILEGRAECSYTTENLKTMCKRSWNVKTKGKIKHFIWKCFSKCL 874
             ++VK  Y  A  +    +   A    +  +LKT   + W ++T+ KIK F+WK  S  +
Sbjct: 859  DYSVKLGYWLASNQNLGQVAIEAMMQPSLNDLKT---QVWKLQTEPKIKVFLWKVLSGAI 915

Query: 873  PTSDQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWRIAPIKWDGIEKYNGSFFE 694
            P  D L +RG  +D  C  CG E E+ +H+ F CS  + +W ++ I    +    GS + 
Sbjct: 916  PVVDLLSYRGMKLDSRCQTCGCEGESIQHVLFSCSFPRQVWAMSNIHVPLLGFECGSVYA 975

Query: 693  WWGKICDLKKDEMSEFRIQLT---TYILWWLWKSRNLWMFQKSWMTEKAVIVAAVKEWEE 523
                   + +D + ++ ++L     +I+W +WK+RNL+ F+    T    I+   K+ E+
Sbjct: 976  NLYHFL-INRDNL-KWPVELRRSFPWIIWRIWKNRNLFFFEGKRFTVLETILKVRKDVED 1033

Query: 522  F 520
            +
Sbjct: 1034 W 1034


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  267 bits (682), Expect = 1e-68
 Identities = 151/424 (35%), Positives = 231/424 (54%), Gaps = 2/424 (0%)
 Frame = -3

Query: 1767 NRLNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATESD 1588
            +R+N W  KFLS  GKE+MIK+V   LP ++MSCF+LP  +  +L   +A+FWW ++  D
Sbjct: 558  SRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTSAVAKFWW-SSNGD 616

Query: 1587 KRKIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFPK 1408
             R +HW +WD L  SK +GGLGF+++  FN AL++KQLWR++T P+ L +KV K RYF K
Sbjct: 617  SRGMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFAKVFKGRYFRK 676

Query: 1407 GSLMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLTKM 1228
             + +D     + S+ WRS + AR ++  GL   + +G SI +W+ PWI   F  RP    
Sbjct: 677  SNPLDSIKSYSPSYGWRSMISARSLVYKGLIKRVGSGASISVWNDPWIPAQFP-RPAKYG 735

Query: 1227 PKDQSP-FWVSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLWWNFEKKG 1051
                 P   V  LI      WN++++ ++F  ED   I AL I +    D L W+F K G
Sbjct: 736  GSIVDPSLKVKSLIDSRSNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHFTKAG 795

Query: 1050 AFTVKSAYSEAIKKFRILEGRAECSYTTENLKTMCKRSWNVKTKGKIKHFIWKCFSKCLP 871
             +TVKS Y  A  +  + EG    +    +L T+    W V+   K++HF+W+  S C+P
Sbjct: 796  NYTVKSGYHTA--RLDLNEG---TTLIGPDLTTLKAYIWKVQCPPKLRHFLWQILSGCVP 850

Query: 870  TSDQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWRIAPIKW-DGIEKYNGSFFE 694
             S+ L  RG   D  C  CG  +E+  H  F+C  A+ IW ++ I    GI   N  F  
Sbjct: 851  VSENLRKRGILCDKGCVSCGASEESINHTLFQCHPARQIWALSQIPTAPGIFPSNSIF-- 908

Query: 693  WWGKICDLKKDEMSEFRIQLTTYILWWLWKSRNLWMFQKSWMTEKAVIVAAVKEWEEFRD 514
                +  L     S        +I+W++WK+RN  +F+        +++ AVKE + +++
Sbjct: 909  --TNLDHLFWRIPSGVDSAPYPWIIWYIWKARNEKVFENVDKDPMEILLLAVKEAQSWQE 966

Query: 513  IEVK 502
             +V+
Sbjct: 967  AQVE 970


>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
          Length = 1452

 Score =  266 bits (680), Expect = 2e-68
 Identities = 138/400 (34%), Positives = 225/400 (56%), Gaps = 4/400 (1%)
 Frame = -3

Query: 1767 NRLNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATESD 1588
            ++++ W +K  S+ GKEI+IKAV  A+P + MS FKLP GLC+++ + +ARFWWG T+ D
Sbjct: 868  SKISSWHHKLFSAGGKEILIKAVAQAVPAYAMSVFKLPKGLCEDIQKEIARFWWG-TKKD 926

Query: 1587 KRKIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFPK 1408
            K  IHW  WDS++ +K  GGLGF+DL  FN AL++KQ WR++  PN L+++V+KARY+  
Sbjct: 927  KHGIHWARWDSMSKAKRRGGLGFRDLPSFNQALVAKQGWRLVRYPNSLMARVMKARYYKN 986

Query: 1407 GSLMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLTKM 1228
             +  +  VG+N S++WRS +    V++ G+ + I +GK + ++   WI     F+P++  
Sbjct: 987  STFWNAKVGSNPSFIWRSILWGSQVIKKGVRWRIGDGKKVLVYKDKWIPRPATFQPISPK 1046

Query: 1227 PKDQSPFWVSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLWWNFEKKGA 1048
                    V++LI  + K W V+ +++ F  ED   I  + +   +E D++ W+F+KKG 
Sbjct: 1047 TLPHETV-VADLIDSENK-WRVDRLEQHFMKEDIEAILKILLPSGKEEDEVLWHFDKKGE 1104

Query: 1047 FTVKSAYSEAIKKFRILEGRAECSYTTENLKTMCKRSWNVKTKGKIKHFIWKCFSKCLPT 868
            ++VKS Y  A+   +      E S ++  L    K  W +    K+K F+W+     LPT
Sbjct: 1105 YSVKSGYQLALN--QNFPNEPESSNSSSRL---WKIPWMLDLPEKVKIFMWRALKNILPT 1159

Query: 867  SDQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWRIAPIKWDGIEKYNGSFF--- 697
            ++ L  R    +PIC  C  + ET  H+  +C  A+ IW +AP+     + +N  FF   
Sbjct: 1160 AENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQPSKDHNQDFFSAI 1219

Query: 696  -EWWGKICDLKKDEMSEFRIQLTTYILWWLWKSRNLWMFQ 580
             E W +         S    +L     W +W +RN ++F+
Sbjct: 1220 QEMWSR--------SSTAEAELMIVYCWVIWSARNKFIFE 1251


>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 765

 Score =  266 bits (680), Expect = 2e-68
 Identities = 138/400 (34%), Positives = 225/400 (56%), Gaps = 4/400 (1%)
 Frame = -3

Query: 1767 NRLNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATESD 1588
            ++++ W +K  S+ GKEI+IKAV  A+P + MS FKLP GLC+++ + +ARFWWG T+ D
Sbjct: 181  SKISSWHHKLFSAGGKEILIKAVAQAVPAYAMSVFKLPKGLCEDIQKEIARFWWG-TKKD 239

Query: 1587 KRKIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFPK 1408
            K  IHW  WDS++ +K  GGLGF+DL  FN AL++KQ WR++  PN L+++V+KARY+  
Sbjct: 240  KHGIHWARWDSMSKAKRRGGLGFRDLPSFNQALVAKQGWRLVRYPNSLMARVMKARYYKN 299

Query: 1407 GSLMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLTKM 1228
             +  +  VG+N S++WRS +    V++ G+ + I +GK + ++   WI     F+P++  
Sbjct: 300  STFWNAKVGSNPSFIWRSILWGSQVIKKGVRWRIGDGKKVLVYKDKWIPRPATFQPISPK 359

Query: 1227 PKDQSPFWVSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLWWNFEKKGA 1048
                    V++LI  + K W V+ +++ F  ED   I  + +   +E D++ W+F+KKG 
Sbjct: 360  TLPHETV-VADLIDSENK-WRVDRLEQHFMKEDIEAILKILLPSGKEEDEVLWHFDKKGE 417

Query: 1047 FTVKSAYSEAIKKFRILEGRAECSYTTENLKTMCKRSWNVKTKGKIKHFIWKCFSKCLPT 868
            ++VKS Y  A+   +      E S ++  L    K  W +    K+K F+W+     LPT
Sbjct: 418  YSVKSGYQLALN--QNFPNEPESSNSSSRL---WKIPWMLDLPEKVKIFMWRALKNILPT 472

Query: 867  SDQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWRIAPIKWDGIEKYNGSFF--- 697
            ++ L  R    +PIC  C  + ET  H+  +C  A+ IW +AP+     + +N  FF   
Sbjct: 473  AENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQPSKDHNQDFFSAI 532

Query: 696  -EWWGKICDLKKDEMSEFRIQLTTYILWWLWKSRNLWMFQ 580
             E W +         S    +L     W +W +RN ++F+
Sbjct: 533  QEMWSR--------SSTAEAELMIVYCWVIWSARNKFIFE 564


>ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis]
          Length = 1160

 Score =  261 bits (666), Expect = 9e-67
 Identities = 138/422 (32%), Positives = 230/422 (54%), Gaps = 1/422 (0%)
 Frame = -3

Query: 1770 LNRLNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATES 1591
            LN+++ W++KF S  GKE++IKA + A+P F MS FK+P+G+C+++ +++  FWWG++  
Sbjct: 543  LNKISSWQHKFFSCGGKEVLIKAAVQAIPAFAMSVFKIPLGICEDIQRIVGNFWWGSSR- 601

Query: 1590 DKRKIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFP 1411
            ++R IHW  W+ ++ +K +GG+GF+D   FN AL++KQ WR+   P+ LV++VL+ARYF 
Sbjct: 602  ERRSIHWSKWEKMSQAKCKGGMGFRDFASFNQALLAKQGWRIQQCPDSLVARVLQARYFH 661

Query: 1410 KGSLMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLTK 1231
              + ++  +G+N S++WRS +  R ++  G  + I NG+ + I    WI   F F+P+ K
Sbjct: 662  SSNFLNAKIGSNPSYIWRSILWGRQIICGGSRWRIGNGQDVHIHKANWIPKPFTFKPVIK 721

Query: 1230 MPKDQSPFWVSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLWWNFEKKG 1051
             P   S   VSELI  +   W+ E+I K F   DA  I  + +      D+L W+F K G
Sbjct: 722  -PTMPSEALVSELINGE-NCWDEELIYKHFDKMDADVITQIPLPRRLREDELIWHFGKSG 779

Query: 1050 AFTVKSAYSEAIK-KFRILEGRAECSYTTENLKTMCKRSWNVKTKGKIKHFIWKCFSKCL 874
             +TVKS Y  A+K +F  +   +E S    N+       W++    KI+ F+W+     L
Sbjct: 780  QYTVKSGYQRALKIRFPAMPSSSESSKNEWNI------IWSLALPKKIRIFVWRAAKNLL 833

Query: 873  PTSDQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWRIAPIKWDGIEKYNGSFFE 694
            P+++ L  R    +P C +C    E   H    C  A+ +WR++    D I+   G    
Sbjct: 834  PSAENLWKRKIVQEPTCQLCKMGIENVFHALVDCKAAKKVWRLSLFYID-IQAAPGQDIL 892

Query: 693  WWGKICDLKKDEMSEFRIQLTTYILWWLWKSRNLWMFQKSWMTEKAVIVAAVKEWEEFRD 514
                +    K   S   + L   +LW  W +RN W+F+      ++V+  A    E ++ 
Sbjct: 893  ---SLLHGVKRMRSNADVDLFAVMLWAKWNARNQWLFKGKRENPQSVVAKAEAVMEAYKR 949

Query: 513  IE 508
            ++
Sbjct: 950  VQ 951


>ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298860 [Fragaria vesca
            subsp. vesca]
          Length = 1164

 Score =  259 bits (662), Expect = 3e-66
 Identities = 131/417 (31%), Positives = 239/417 (57%), Gaps = 1/417 (0%)
 Frame = -3

Query: 1767 NRLNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATESD 1588
            +++ +WK+K LS+A KE+MIKAV+ ++P ++MS  ++   +C E+ + MA FWWG  +SD
Sbjct: 734  DKMKNWKDKTLSAAKKEVMIKAVVQSVPTYVMSVLEVLKHICNEMHRCMAEFWWG--DSD 791

Query: 1587 K-RKIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFP 1411
            + RKIHW +WD +   K+EGGLGF+++++FN AL++K+ WR++   + LV++ LKA+YFP
Sbjct: 792  RGRKIHWVAWDKMCAPKNEGGLGFRNMELFNQALLAKKGWRIINSLDSLVTRTLKAKYFP 851

Query: 1410 KGSLMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLTK 1231
             G  +  ++G++AS++WRS +K R ++R G+ Y + NG+SI +WH PWI     F+  + 
Sbjct: 852  SGHFLKAEMGSDASYVWRSLLKGRDLLRKGIRYHVGNGESISVWHDPWILRPCTFKTYST 911

Query: 1230 MPKDQSPFWVSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLWWNFEKKG 1051
            + +      V++LI PD + W V+ ++++F  ED  ++ +L   +    D+L W+++K G
Sbjct: 912  VMEGLEDLKVADLIDPDTRVWMVDWLNELF-FEDEVEVISLSFRNPD--DQLIWHYDKHG 968

Query: 1050 AFTVKSAYSEAIKKFRILEGRAECSYTTENLKTMCKRSWNVKTKGKIKHFIWKCFSKCLP 871
             +TV+  Y  A  +  ++  +   +    N     K  W VK + KIK FIW+       
Sbjct: 969  LYTVRRGYYTA--RCALVSQQQASTSAPRNSCDKWKAVWKVKVQPKIKCFIWRLLKDSSS 1026

Query: 870  TSDQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWRIAPIKWDGIEKYNGSFFEW 691
            T   L  R    D  C  C   +ET+ H+F  C     +W  +P+      +   S  +W
Sbjct: 1027 TRSALAHRIALEDQSCLFCRCAQETSMHVFKDCQVIACMWLCSPLGLRARNQEANSKSDW 1086

Query: 690  WGKICDLKKDEMSEFRIQLTTYILWWLWKSRNLWMFQKSWMTEKAVIVAAVKEWEEF 520
            +    ++  + + + ++++   +LW +W  RN  +++++       +  ++K  EE+
Sbjct: 1087 F----EIMMETLQKSQLEVFVMLLWAIWTGRNNILWKEAQFDPAHTVRWSLKLLEEY 1139


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score =  259 bits (662), Expect = 3e-66
 Identities = 140/420 (33%), Positives = 222/420 (52%), Gaps = 4/420 (0%)
 Frame = -3

Query: 1767 NRLNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATESD 1588
            +RL  W  K LS  GKE+++K++  ALPV++MSCFKLP  LC++L  VM  FWW + +  
Sbjct: 773  SRLTGWYAKTLSQGGKEVLLKSIALALPVYVMSCFKLPKNLCQKLTTVMMDFWWNSMQQ- 831

Query: 1587 KRKIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFPK 1408
            KRKIHW SW  L   KD+GG GFKDLQ FN AL++KQ WRV+     L S+V ++RYF  
Sbjct: 832  KRKIHWLSWQRLTLPKDQGGFGFKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSN 891

Query: 1407 GSLMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLTKM 1228
               +    G+  S+ WRS +  R ++  GL   I NG+   +W   W+ D    RPL + 
Sbjct: 892  SDFLSATRGSRPSYAWRSILFGRELLMQGLRTVIGNGQKTFVWTDKWLHDGSNRRPLNRR 951

Query: 1227 PKDQSPFWVSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQ---ERDKLWWNFEK 1057
                    VS+LI P  ++WN+ ++  +F     WK   + +       + D   W    
Sbjct: 952  RFINVDLKVSQLIDPTSRNWNLNMLRDLF----PWKDVEIILKQRPLFFKEDSFCWLHSH 1007

Query: 1056 KGAFTVKSAYSEAIKKFRILEGRAECSYTTENLKTMCKRSWNVKTKGKIKHFIWKCFSKC 877
             G ++VK+ Y    K  ++     + +    ++ ++  + WN+ T  KI+ F+WK     
Sbjct: 1008 NGLYSVKTGYEFLSK--QVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGA 1065

Query: 876  LPTSDQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWRIAPIKWDGIEKYNGSFF 697
            +P  D+L  RG   D  C MC  E ET  HI F+C  A+ +W I  +   G E ++ S +
Sbjct: 1066 IPVEDRLRTRGIRSDDGCLMCDTENETINHILFECPLARQVWAITHLSSAGSE-FSNSVY 1124

Query: 696  EWWGKICDL-KKDEMSEFRIQLTTYILWWLWKSRNLWMFQKSWMTEKAVIVAAVKEWEEF 520
                ++ DL +++++      ++ +ILW+LWK+RN  +F+        ++  A + + E+
Sbjct: 1125 TNMSRLIDLTQQNDLPHHLRFVSPWILWFLWKNRNALLFEGKGSITTTLVDKAYEAYHEW 1184


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X2
            [Citrus sinensis]
          Length = 765

 Score =  259 bits (661), Expect = 3e-66
 Identities = 139/400 (34%), Positives = 225/400 (56%), Gaps = 3/400 (0%)
 Frame = -3

Query: 1770 LNRLNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATES 1591
            +N++++W+  F SS GKEI+IKAV  A+P + MS FKLP+GLC+++ + +A FWWG  + 
Sbjct: 184  INKISNWQANFFSSGGKEILIKAVAQAVPAYAMSVFKLPLGLCEDMQKAIAGFWWGK-KR 242

Query: 1590 DKRKIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFP 1411
            +KR IHW  W+ L  +K  GGLGF+DL  FN AL++KQ WR++  P  LV++V+K +YF 
Sbjct: 243  EKRSIHWSKWERLCQAKKRGGLGFRDLSSFNQALVAKQSWRIIQAPESLVARVMKEKYFR 302

Query: 1410 KGSLMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLT- 1234
                M+  +G+N S++WRS +  R V+R GL + I +GK ++++   W+     F+P++ 
Sbjct: 303  HSCFMEAQIGSNPSYIWRSILWGREVIRKGLRWRIGDGKLVKVYQSGWLPRPETFKPISP 362

Query: 1233 -KMPKDQSPFWVSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLWWNFEK 1057
              +P D +   VS LI  D + W  ++I + F  EDA +I  + +      D++ W+++K
Sbjct: 363  PSLPLDTT---VSVLIDED-QCWRDDVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDK 418

Query: 1056 KGAFTVKSAYSEAIK-KFRILEGRAECSYTTENLKTMCKRSWNVKTKGKIKHFIWKCFSK 880
            KG ++VKS Y  A++ KF     R   S    N        W ++   K+K F+W+  + 
Sbjct: 419  KGNYSVKSGYQLALQMKF---PNRPSSSKEDNN---SWNSIWYLQIPEKVKIFMWRATND 472

Query: 879  CLPTSDQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWRIAPIKWDGIEKYNGSF 700
             LPTS+ L  R     P C  C   +ET  H  F C  ++ IW++   +    E+     
Sbjct: 473  LLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFE----EEVKALK 528

Query: 699  FEWWGKICDLKKDEMSEFRIQLTTYILWWLWKSRNLWMFQ 580
             +    +     D  S+  ++L   + W +W SRNL++FQ
Sbjct: 529  CKDVLSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQ 568


>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
            [Citrus sinensis]
          Length = 968

 Score =  259 bits (661), Expect = 3e-66
 Identities = 139/400 (34%), Positives = 225/400 (56%), Gaps = 3/400 (0%)
 Frame = -3

Query: 1770 LNRLNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATES 1591
            +N++++W+  F SS GKEI+IKAV  A+P + MS FKLP+GLC+++ + +A FWWG  + 
Sbjct: 387  INKISNWQANFFSSGGKEILIKAVAQAVPAYAMSVFKLPLGLCEDMQKAIAGFWWGK-KR 445

Query: 1590 DKRKIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFP 1411
            +KR IHW  W+ L  +K  GGLGF+DL  FN AL++KQ WR++  P  LV++V+K +YF 
Sbjct: 446  EKRSIHWSKWERLCQAKKRGGLGFRDLSSFNQALVAKQSWRIIQAPESLVARVMKEKYFR 505

Query: 1410 KGSLMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLT- 1234
                M+  +G+N S++WRS +  R V+R GL + I +GK ++++   W+     F+P++ 
Sbjct: 506  HSCFMEAQIGSNPSYIWRSILWGREVIRKGLRWRIGDGKLVKVYQSGWLPRPETFKPISP 565

Query: 1233 -KMPKDQSPFWVSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLWWNFEK 1057
              +P D +   VS LI  D + W  ++I + F  EDA +I  + +      D++ W+++K
Sbjct: 566  PSLPLDTT---VSVLIDED-QCWRDDVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDK 621

Query: 1056 KGAFTVKSAYSEAIK-KFRILEGRAECSYTTENLKTMCKRSWNVKTKGKIKHFIWKCFSK 880
            KG ++VKS Y  A++ KF     R   S    N        W ++   K+K F+W+  + 
Sbjct: 622  KGNYSVKSGYQLALQMKF---PNRPSSSKEDNN---SWNSIWYLQIPEKVKIFMWRATND 675

Query: 879  CLPTSDQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWRIAPIKWDGIEKYNGSF 700
             LPTS+ L  R     P C  C   +ET  H  F C  ++ IW++   +    E+     
Sbjct: 676  LLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFE----EEVKALK 731

Query: 699  FEWWGKICDLKKDEMSEFRIQLTTYILWWLWKSRNLWMFQ 580
             +    +     D  S+  ++L   + W +W SRNL++FQ
Sbjct: 732  CKDVLSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQ 771


>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 769

 Score =  259 bits (661), Expect = 3e-66
 Identities = 139/400 (34%), Positives = 225/400 (56%), Gaps = 3/400 (0%)
 Frame = -3

Query: 1770 LNRLNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATES 1591
            +N++++W+  F SS GKEI+IKAV  A+P + MS FKLP+GLC+++ + +A FWWG  + 
Sbjct: 184  INKISNWQANFFSSGGKEILIKAVAQAVPAYAMSVFKLPLGLCEDMQKAIAGFWWGK-KR 242

Query: 1590 DKRKIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFP 1411
            +KR IHW  W+ L  +K  GGLGF+DL  FN AL++KQ WR++  P  LV++V+K +YF 
Sbjct: 243  EKRSIHWSKWERLCQAKKRGGLGFRDLSSFNQALVAKQSWRIIQAPESLVARVMKEKYFR 302

Query: 1410 KGSLMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLT- 1234
                M+  +G+N S++WRS +  R V+R GL + I +GK ++++   W+     F+P++ 
Sbjct: 303  HSCFMEAQIGSNPSYIWRSILWGREVIRKGLRWRIGDGKLVKVYQSGWLPRPETFKPISP 362

Query: 1233 -KMPKDQSPFWVSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLWWNFEK 1057
              +P D +   VS LI  D + W  ++I + F  EDA +I  + +      D++ W+++K
Sbjct: 363  PSLPLDTT---VSVLIDED-QCWRDDVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDK 418

Query: 1056 KGAFTVKSAYSEAIK-KFRILEGRAECSYTTENLKTMCKRSWNVKTKGKIKHFIWKCFSK 880
            KG ++VKS Y  A++ KF     R   S    N        W ++   K+K F+W+  + 
Sbjct: 419  KGNYSVKSGYQLALQMKF---PNRPSSSKEDNN---SWNSIWYLQIPEKVKIFMWRATND 472

Query: 879  CLPTSDQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWRIAPIKWDGIEKYNGSF 700
             LPTS+ L  R     P C  C   +ET  H  F C  ++ IW++   +    E+     
Sbjct: 473  LLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFE----EEVKALK 528

Query: 699  FEWWGKICDLKKDEMSEFRIQLTTYILWWLWKSRNLWMFQ 580
             +    +     D  S+  ++L   + W +W SRNL++FQ
Sbjct: 529  CKDVLSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQ 568


>ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 786

 Score =  259 bits (661), Expect = 3e-66
 Identities = 146/431 (33%), Positives = 231/431 (53%), Gaps = 6/431 (1%)
 Frame = -3

Query: 1764 RLNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATESDK 1585
            +L  WK + LS AGKEI+IK+V  A+P + M+CFK P G+C  +   ++ FWWG+T +  
Sbjct: 214  KLVGWKQRSLSWAGKEILIKSVATAIPAYPMACFKFPKGVCDTINSALSNFWWGSTSTGN 273

Query: 1584 RKIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFPKG 1405
            R IHWKSW+ L  +K+EGGLGF+DL  FN +L++KQ WR++  PN L + VLKARYFP  
Sbjct: 274  R-IHWKSWELLGKTKEEGGLGFRDLHQFNMSLLAKQCWRLVEEPNSLWASVLKARYFPNC 332

Query: 1404 SLMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLT--- 1234
              ++   G  ASW W S ++AR ++  G  + + NGKSI+IWH  WI    +   +    
Sbjct: 333  GFLEATKGYRASWSWASLIEARDLVFQGCCWQVVNGKSIQIWHDSWIPPPSMGGGILIDG 392

Query: 1233 KMPKDQSPFWVSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLWWNFEKK 1054
             +P   SP  V  LI  D  +W ++ +  V   E   +I+ + I ++   D+L W + K 
Sbjct: 393  ALP-PSSPQLVDSLIDWDTHTWRLDGVANVLSREAEDRIRCIPIGEEDGNDRLLWPWSKN 451

Query: 1053 GAFTVKSAYSEAIKKFRILEGRAECSYTTENL-KTMCKRSWNVKTKGKIKHFIWKCFSKC 877
            G+FTVKS Y    ++  +       + T+  + K M +  W + T  K+K F W+     
Sbjct: 452  GSFTVKSGYHWLHQQSSMNASPLVITGTSHRVGKKMWRLLWGMPTLPKVKLFFWQVMGGV 511

Query: 876  LPTSDQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWRIAPIKWDGIEKYNGSFF 697
             P    L  R     P+C +CG E ET EH+   CS    IW  +P+    I+K   +  
Sbjct: 512  GPNFSNLYKRKLTSSPMCPLCGLEDETFEHLLLLCSWVSPIWFGSPMGL-RIDKQQITMV 570

Query: 696  EWW--GKICDLKKDEMSEFRIQLTTYILWWLWKSRNLWMFQKSWMTEKAVIVAAVKEWEE 523
            + W       +   +  EF + +++ I W +WK+R  ++++   ++ ++ +  A+    E
Sbjct: 571  DSWFINSYSSIVGTKQKEFFLTMSSMICWMIWKARCNYLYKGIPVSPQSTLHLAINLAME 630

Query: 522  FRDIEVKGRKL 490
            F  +E K  +L
Sbjct: 631  F--MEAKATQL 639


>gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
          Length = 1060

 Score =  258 bits (659), Expect = 6e-66
 Identities = 146/430 (33%), Positives = 226/430 (52%), Gaps = 14/430 (3%)
 Frame = -3

Query: 1761 LNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATESDKR 1582
            ++ WK K LS AGKEI+IKAVL A+P + MSCF++P GLCKEL  +MARFWW A   DKR
Sbjct: 479  ISGWKEKLLSRAGKEILIKAVLQAIPTYSMSCFRIPKGLCKELNGIMARFWW-AKAKDKR 537

Query: 1581 KIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFPKGS 1402
             IHW  W+ L  SK  GGLGF+DL+ FN AL++KQ WR++  P  LV+++ +ARY P   
Sbjct: 538  GIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVP 597

Query: 1401 LMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLTKMPK 1222
             ++ +VGTN S++WRS    + ++  GL + + +G SI+++   W+     F+ +   P+
Sbjct: 598  FLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGSGVSIQVYTDKWLPAPSCFK-IMSPPQ 656

Query: 1221 DQSPFWVSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLWWNFEKKGAFT 1042
                  V +L    G+ WNV ++  +F  ++   I  + +      D L W++E+ G ++
Sbjct: 657  LPLSTRVCDLFTSSGQ-WNVPLLKDIFWDQEVDAILQIPLASLAGHDCLIWHYERNGMYS 715

Query: 1041 VKSAYSEAIKKFRILEGRAECSYTTENLKTMCKRSWNVKTKGKIKHFIWKCFSKCLPTSD 862
            VKS Y  A  +   + G  E S   +      K+ W +K   KIK F+W+C    LP   
Sbjct: 716  VKSGYRLAGLEKDKMSG--EPSARVDLNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQ 773

Query: 861  QLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWRIAPIKWDGIEKYNGSFFEWWGK 682
             L  R     PIC  C  + E+  H  + C  A+ +WR +                 WG 
Sbjct: 774  ILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKEVWRNSA----------------WGN 817

Query: 681  ICDLKKDEMSEFR-----IQLTT---------YILWWLWKSRNLWMFQKSWMTEKAVIVA 544
            +C++ +  ++ FR     +QL++         Y+ W LW  RN ++F+    T   ++  
Sbjct: 818  VCEVWR--VNSFRELWHALQLSSSGEEQGLFAYLCWGLWNRRNSFIFEGKSETAIQLLSR 875

Query: 543  AVKEWEEFRD 514
              K  +EF D
Sbjct: 876  MTKLAQEFSD 885


>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1138

 Score =  258 bits (658), Expect = 8e-66
 Identities = 142/398 (35%), Positives = 219/398 (55%), Gaps = 3/398 (0%)
 Frame = -3

Query: 1767 NRLNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATESD 1588
            +RL+ W  + LS  GKEI++KAV  A+ V+ MSCFKL    CK L   M+ FWW A E  
Sbjct: 550  SRLSGWFARTLSLGGKEILLKAVAMAMQVYAMSCFKLTKTTCKNLTSAMSDFWWNALEH- 608

Query: 1587 KRKIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFPK 1408
            KRK HW SW+ L  +K+ GGLGF+D++ FN AL++KQ WR++  P+ L ++  K+RYF  
Sbjct: 609  KRKTHWVSWEKLCLAKESGGLGFRDIESFNQALLAKQSWRILQYPSFLFARFFKSRYFDD 668

Query: 1407 GSLMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLTKM 1228
               ++ D+G   S+   S +  R ++  GL   + NGKS+ +W  PWI D     PL + 
Sbjct: 669  EEFLEADLGVRPSYACCSILFGRELLAKGLRKEVGNGKSLNVWMDPWIFDIAPRLPLQRH 728

Query: 1227 PKDQSPFWVSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLW-WNFEKKG 1051
                    V++LI  + + W  ++++++F   D   I   K +     D  W W   K G
Sbjct: 729  FSVNLDLKVNDLINFEDRCWKRDLLEELFYPTDVELI--TKRNPVVNMDDFWVWLHAKTG 786

Query: 1050 AFTVKSAYSEAIKKFRI-LEGRAECSYTTENLKTMCKRSWNVKTKGKIKHFIWKCFSKCL 874
             ++VKS Y  A +  ++ L  +A    +T  LK   ++ W+ K+  KIK F+W+  S  L
Sbjct: 787  EYSVKSGYWLAFQSNKLDLIQQANLLPSTNGLK---EQVWSTKSSPKIKMFLWRILSAAL 843

Query: 873  PTSDQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWRIAPIKWDGIEKYNGSFFE 694
            P +DQ+I RG  IDP C +CG+E E+  H+ F CS A+ +W ++ +        N S F 
Sbjct: 844  PVADQIIRRGMSIDPRCQICGDEGESTNHVLFTCSMARQVWALSGVPTPEFGFQNASIFA 903

Query: 693  WWGKICDLKKDEMSEFRIQLT-TYILWWLWKSRNLWMF 583
                + +LKK  +    ++ +  ++LW LWK+RN   F
Sbjct: 904  NIQFLFELKKMILVPDLVKRSWPWVLWRLWKNRNKLFF 941


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score =  258 bits (658), Expect = 8e-66
 Identities = 137/421 (32%), Positives = 222/421 (52%), Gaps = 8/421 (1%)
 Frame = -3

Query: 1752 WKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATESDKRKIH 1573
            W++ FLS  GKEI++KAV  ALP + MSCFK+P  +C+++  VMA FWW   + + R +H
Sbjct: 779  WQSNFLSPGGKEILLKAVAMALPTYTMSCFKIPKTICQQIESVMAEFWW-KNKKEGRGLH 837

Query: 1572 WKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFPKGSLMD 1393
            WK+W  L+  K  GGLGFK+++ FN AL+ KQLWR++T  + L++KV K+RYF K   ++
Sbjct: 838  WKAWCHLSRPKAVGGLGFKEIEAFNIALLGKQLWRMITEKDSLMAKVFKSRYFSKSDPLN 897

Query: 1392 VDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWI-------KDSFLFRPLT 1234
              +G+  S+ W+S  +A+ +++ G+   I NG++I +W  PWI         +     L 
Sbjct: 898  APLGSRPSFAWKSIYEAQVLIKQGIRAVIGNGETINVWTDPWIGAKPAKAAQAVKRSHLV 957

Query: 1233 KMPKDQSPFWVSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLWWNFEKK 1054
                  S   V +L+ PDG+ WN  ++  +F       I AL+    + RD+  W + + 
Sbjct: 958  SQYAANSIHVVKDLLLPDGRDWNWNLVSLLFPDNTQENILALRPGGKETRDRFTWEYSRS 1017

Query: 1053 GAFTVKSAYSEAIKKFRILEGRAECSYTTENLKTMCKRSWNVKTKGKIKHFIWKCFSKCL 874
            G ++VKS Y    +         E      +L  + ++ W +    KI HF+W+C + CL
Sbjct: 1018 GHYSVKSGYWVMTEIINQRNNPQE--VLQPSLDPIFQQIWKLDVPPKIHHFLWRCVNNCL 1075

Query: 873  PTSDQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWRIAPIKWDGIEKYNGSFFE 694
              +  L +R    +  C  C    ET  H+ FKC  A+L W I+P+      ++  S F 
Sbjct: 1076 SVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAISPLPAPPGGEWAESLFR 1135

Query: 693  WWGKICDLKKDEMSEF-RIQLTTYILWWLWKSRNLWMFQKSWMTEKAVIVAAVKEWEEFR 517
                +  + K +  E     L  +ILW LWK+RN  +F+    T   VI+ A ++ + + 
Sbjct: 1136 NMHHVLSVHKSQPEESDHHALIPWILWRLWKNRNDLVFKGREFTAPQVILKATEDMDAWN 1195

Query: 516  D 514
            +
Sbjct: 1196 N 1196


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  256 bits (655), Expect = 2e-65
 Identities = 135/346 (39%), Positives = 197/346 (56%), Gaps = 7/346 (2%)
 Frame = -3

Query: 1764 RLNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATESDK 1585
            R+  WK K LS AGKEI+IKAV  A+P F M CF+L   LC ++ +++A++WW   E D 
Sbjct: 1031 RIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDN 1090

Query: 1584 RKIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFPKG 1405
             K+HW SW+ L   K+ GGLGF+D+ +FN A+++KQ WR++  P+ L S+VL+A+YFP G
Sbjct: 1091 -KMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLG 1149

Query: 1404 SLMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLTKMP 1225
                    +N S+ WRS  K   V++NG+ + + +G  I IW  PWI   +  +P+T  P
Sbjct: 1150 DCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKPMT--P 1207

Query: 1224 KDQSPFW-VSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLWWNFEKKGA 1048
            +  +    V ELI P   +W+ +++ + F  ED   IK++ +H + E D L W+F+ +G 
Sbjct: 1208 RGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEME-DVLAWHFDARGC 1266

Query: 1047 FTVKSAYSEAIKKFRILEGRAE------CSYTTENLKTMCKRSWNVKTKGKIKHFIWKCF 886
            FTVKSAY    K  R +E RA        S          K+ W +   GKIKHF+W+  
Sbjct: 1267 FTVKSAY----KVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMC 1322

Query: 885  SKCLPTSDQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWR 748
               L     L  RG  +D  C MCG   E A H+FFKC   + +W+
Sbjct: 1323 HNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQ 1368


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  256 bits (655), Expect = 2e-65
 Identities = 147/399 (36%), Positives = 216/399 (54%), Gaps = 9/399 (2%)
 Frame = -3

Query: 1764 RLNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATESDK 1585
            R+  WK K LS AGKEI+IKAV  A+P F M CF+L   LC ++ +++A++WW   E D 
Sbjct: 1004 RIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDN 1063

Query: 1584 RKIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFPKG 1405
             K+HW SW+ L   K+ GGLGF+D+ +FN A+++KQ WR++  P+ L S+VL+A+YFP G
Sbjct: 1064 -KMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLG 1122

Query: 1404 SLMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLTKMP 1225
                    +N S+ WRS  K   V++NG+ + + +G  I IW  PWI   +  +P+T  P
Sbjct: 1123 DCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRMGDGSKINIWADPWIPRGWSRKPMT--P 1180

Query: 1224 KDQSPFW-VSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLWWNFEKKGA 1048
            +  +    V ELI P   +W+ +++ + F  ED   IK++ +H + E D L W+F+ +G 
Sbjct: 1181 RGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEME-DVLAWHFDARGC 1239

Query: 1047 FTVKSAYSEAIKKFRILEGRAE------CSYTTENLKTMCKRSWNVKTKGKIKHFIWKCF 886
            FTVKSAY    K  R +E RA        S          K+ W +   GKIKHF+W+  
Sbjct: 1240 FTVKSAY----KVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMC 1295

Query: 885  SKCLPTSDQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWRIAPIKWDGIEKYNG 706
               L     L  RG  +D  C MCG   E A H+FFKC   + +W+        +E+   
Sbjct: 1296 HNTLALRANLQHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQAL-----NLEELR- 1349

Query: 705  SFFEWWGKICDLKKDEMSEFRIQLTTYI--LWWLWKSRN 595
            S  E      ++ +       I+ T+ I  LW  WK RN
Sbjct: 1350 SMLEQQTSGKNVLQSIYCRPEIERTSAIVCLWQWWKERN 1388


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score =  255 bits (651), Expect = 5e-65
 Identities = 134/346 (38%), Positives = 196/346 (56%), Gaps = 7/346 (2%)
 Frame = -3

Query: 1764 RLNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATESDK 1585
            R+  WK K LS AGKEI+IKAV   +P F M CF+L   LC ++ +++A++WW   E D 
Sbjct: 976  RIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDN 1035

Query: 1584 RKIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFPKG 1405
             K+HW SW+ L   K+ GGLGF+D+ +FN A+++KQ WR++  P+ L S+VL+A+YFP G
Sbjct: 1036 -KMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLG 1094

Query: 1404 SLMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLTKMP 1225
                    +N S+ WRS  K   V++NG+ + + +G  I IW  PWI   +  +P+T  P
Sbjct: 1095 DCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKPMT--P 1152

Query: 1224 KDQSPFW-VSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLWWNFEKKGA 1048
            +  +    V ELI P   +W+ +++ + F  ED   IK++ +H + E D L W+F+ +G 
Sbjct: 1153 RGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEME-DVLAWHFDARGC 1211

Query: 1047 FTVKSAYSEAIKKFRILEGRAE------CSYTTENLKTMCKRSWNVKTKGKIKHFIWKCF 886
            FTVKSAY    K  R +E RA        S          K+ W +   GKIKHF+W+  
Sbjct: 1212 FTVKSAY----KVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMC 1267

Query: 885  SKCLPTSDQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWR 748
               L     L  RG  +D  C MCG   E A H+FFKC   + +W+
Sbjct: 1268 HNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQ 1313


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score =  255 bits (651), Expect = 5e-65
 Identities = 134/346 (38%), Positives = 196/346 (56%), Gaps = 7/346 (2%)
 Frame = -3

Query: 1764 RLNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATESDK 1585
            R+  WK K LS AGKEI+IKAV   +P F M CF+L   LC ++ +++A++WW   E D 
Sbjct: 972  RIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDN 1031

Query: 1584 RKIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFPKG 1405
             K+HW SW+ L   K+ GGLGF+D+ +FN A+++KQ WR++  P+ L S+VL+A+YFP G
Sbjct: 1032 -KMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLG 1090

Query: 1404 SLMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLTKMP 1225
                    +N S+ WRS  K   V++NG+ + + +G  I IW  PWI   +  +P+T  P
Sbjct: 1091 DCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKPMT--P 1148

Query: 1224 KDQSPFW-VSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLWWNFEKKGA 1048
            +  +    V ELI P   +W+ +++ + F  ED   IK++ +H + E D L W+F+ +G 
Sbjct: 1149 RGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEME-DVLAWHFDARGC 1207

Query: 1047 FTVKSAYSEAIKKFRILEGRAE------CSYTTENLKTMCKRSWNVKTKGKIKHFIWKCF 886
            FTVKSAY    K  R +E RA        S          K+ W +   GKIKHF+W+  
Sbjct: 1208 FTVKSAY----KVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMC 1263

Query: 885  SKCLPTSDQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWR 748
               L     L  RG  +D  C MCG   E A H+FFKC   + +W+
Sbjct: 1264 HNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQ 1309


>gb|EEC74955.1| hypothetical protein OsI_10942 [Oryza sativa Indica Group]
          Length = 961

 Score =  253 bits (646), Expect = 2e-64
 Identities = 120/346 (34%), Positives = 199/346 (57%)
 Frame = -3

Query: 1764 RLNDWKNKFLSSAGKEIMIKAVLNALPVFIMSCFKLPVGLCKELGQVMARFWWGATESDK 1585
            RL++W  K LS  GKE++IK+VL ALP ++MS F+LP  LC+E  Q++ +FWWG  +++ 
Sbjct: 515  RLSEWCEKNLSMGGKEVLIKSVLQALPTYVMSVFRLPASLCEEYMQLIRKFWWGEDQNN- 573

Query: 1584 RKIHWKSWDSLAWSKDEGGLGFKDLQVFNDALISKQLWRVMTLPNLLVSKVLKARYFPKG 1405
            RK+HW SW  L   K +GG+GF+DL++FN AL+++Q WR++  P+ L ++VLKA+YFP G
Sbjct: 574  RKVHWISWQQLIKPKGQGGIGFRDLKLFNQALLARQAWRLIQYPSSLCAQVLKAKYFPSG 633

Query: 1404 SLMDVDVGTNASWLWRSWMKARYVMRNGLTYSIANGKSIRIWHVPWIKDSFLFRPLTKMP 1225
             L+D     ++S  W+  M    +++ GL + I++G  ++IW   WI      + + +  
Sbjct: 634  DLIDTAFPVDSSETWKGIMHGLELLKKGLIWRISDGSKVKIWRDNWIPREHNLKVIGRKT 693

Query: 1224 KDQSPFWVSELIQPDGKSWNVEIIDKVFCVEDAWKIKALKIHDDQERDKLWWNFEKKGAF 1045
            + +   WVS+L+ PD + WN E++  +F   DA  I  +++      D + W+++K G F
Sbjct: 694  RSRLK-WVSDLLLPDRQQWNEELVRNMFYPPDAEGILRIQLPHSPGEDIVAWHYDKSGIF 752

Query: 1044 TVKSAYSEAIKKFRILEGRAECSYTTENLKTMCKRSWNVKTKGKIKHFIWKCFSKCLPTS 865
            TV+SAY  A+      +   E S      +T+ K  WN +   K++ F W+    CL T 
Sbjct: 753  TVRSAYKVALDALLRSDNTGESSSAPNGERTLWKNIWNTQVPQKVRIFAWRLARDCLATQ 812

Query: 864  DQLIFRGCCIDPICHMCGEEKETAEHIFFKCSRAQLIWRIAPIKWD 727
             +   R     P+C +CG+ +E   H    C++A+ +     I W+
Sbjct: 813  AKKKRRNIVKSPVCEICGKCEEDGFHATVACTKARALRSEMRIYWN 858