BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00027721
         (490 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004229547.1| PREDICTED: pentatricopeptide repeat-containi...   126   3e-27
ref|XP_006359126.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27
ref|XP_002310674.2| hypothetical protein POPTR_0007s08080g [Popu...   116   4e-24
ref|XP_002332913.1| predicted protein [Populus trichocarpa]           112   7e-23
ref|XP_003599152.1| Pentatricopeptide repeat-containing protein ...   110   2e-22
ref|XP_003540076.2| PREDICTED: pentatricopeptide repeat-containi...   109   4e-22
ref|XP_002513375.1| pentatricopeptide repeat-containing protein,...   106   4e-21
gb|EOY14016.1| Tetratricopeptide repeat-like superfamily protein...   105   8e-21
ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arab...   101   9e-20
gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]              99   6e-19
ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containi...    96   4e-18
emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]    96   4e-18
gb|EPS65427.1| hypothetical protein M569_09347, partial [Genlise...    87   3e-15
ref|XP_006853435.1| hypothetical protein AMTR_s00032p00176600 [A...    70   4e-10
ref|XP_002516589.1| pentatricopeptide repeat-containing protein,...    69   8e-10
ref|XP_006836657.1| hypothetical protein AMTR_s00088p00046850 [A...    67   3e-09
gb|EOY09326.1| Mitochondrial RNAediting factor 1 [Theobroma cacao]     66   4e-09
ref|XP_006844123.1| hypothetical protein AMTR_s00006p00257020 [A...    66   5e-09
ref|XP_004301443.1| PREDICTED: putative pentatricopeptide repeat...    65   7e-09
gb|EXB53136.1| hypothetical protein L484_006956 [Morus notabilis]      64   2e-08

>ref|XP_004229547.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Solanum lycopersicum]
          Length = 1038

 Score =  126 bits (317), Expect = 3e-27
 Identities = 58/97 (59%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
 Frame = +3

Query: 159 QCRED-PKDNILQCIINNPHPELSGFPQKGFSQINKEVVGKAVHAMCIKDWTHLSIFHTN 335
           QCR+  P     Q + ++P PE+SGF QKGFS I +++VG+AVHA+C+K+  HLSIFH N
Sbjct: 38  QCRQQQPISRPFQSLQDHPEPEISGFHQKGFSNITQDIVGRAVHAVCLKEEPHLSIFHYN 97

Query: 336 TLIHMYSKFGNIRYAKQVFDRMPDRNAASWNNMISGY 446
           TLI++YSKFG I  A+ VFD MP+RN ASWNNM+SGY
Sbjct: 98  TLINVYSKFGRIEVARHVFDGMPERNLASWNNMVSGY 134



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/58 (43%), Positives = 34/58 (58%)
 Frame = +3

Query: 273 GKAVHAMCIKDWTHLSIFHTNTLIHMYSKFGNIRYAKQVFDRMPDRNAASWNNMISGY 446
           GK +HA+ I    H ++   N L+ MY K G +  AK VF +MPDR   +WN +I GY
Sbjct: 482 GKIIHALVIAHGLHDNLIVGNALVTMYGKCGMMWEAKMVFQKMPDRELVTWNALIGGY 539


>ref|XP_006359126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Solanum tuberosum]
          Length = 1038

 Score =  125 bits (315), Expect = 4e-27
 Identities = 58/97 (59%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
 Frame = +3

Query: 159 QCRED-PKDNILQCIINNPHPELSGFPQKGFSQINKEVVGKAVHAMCIKDWTHLSIFHTN 335
           QCR+  P +   Q + ++P PE+SGF QKGFS I +++VG+AVHA+C+K+  HLSIFH N
Sbjct: 38  QCRQQQPINRPFQSLQDHPEPEISGFHQKGFSNITQDIVGRAVHAVCLKEEPHLSIFHYN 97

Query: 336 TLIHMYSKFGNIRYAKQVFDRMPDRNAASWNNMISGY 446
           TLI+M SKFG I  A+ VFD MP+RN+ASWNNM+SGY
Sbjct: 98  TLINMNSKFGRIEAARHVFDSMPERNSASWNNMVSGY 134



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/58 (43%), Positives = 34/58 (58%)
 Frame = +3

Query: 273 GKAVHAMCIKDWTHLSIFHTNTLIHMYSKFGNIRYAKQVFDRMPDRNAASWNNMISGY 446
           GK +HA+ I    H ++   N L+ MY K G +  AK VF +MPDR   +WN +I GY
Sbjct: 482 GKTIHALVIAHGLHDNLIVGNALVTMYGKCGMMWEAKMVFQKMPDRELVTWNALIGGY 539


>ref|XP_002310674.2| hypothetical protein POPTR_0007s08080g [Populus trichocarpa]
           gi|550334392|gb|EEE91124.2| hypothetical protein
           POPTR_0007s08080g [Populus trichocarpa]
          Length = 999

 Score =  116 bits (290), Expect = 4e-24
 Identities = 50/83 (60%), Positives = 72/83 (86%)
 Frame = +3

Query: 198 IINNPHPELSGFPQKGFSQINKEVVGKAVHAMCIKDWTHLSIFHTNTLIHMYSKFGNIRY 377
           ++N+P+PE+S F QKGFSQI KEV GKA+HA+CIK   +L++F++NTLI+MYSKFG+I +
Sbjct: 13  LLNHPNPEISCFYQKGFSQITKEVTGKALHALCIKGLVNLTVFYSNTLINMYSKFGHIGF 72

Query: 378 AKQVFDRMPDRNAASWNNMISGY 446
           ++ +FD+M +RN ASWNNM+SG+
Sbjct: 73  SRYLFDKMSERNDASWNNMMSGF 95


>ref|XP_002332913.1| predicted protein [Populus trichocarpa]
          Length = 253

 Score =  112 bits (279), Expect = 7e-23
 Identities = 49/83 (59%), Positives = 71/83 (85%)
 Frame = +3

Query: 198 IINNPHPELSGFPQKGFSQINKEVVGKAVHAMCIKDWTHLSIFHTNTLIHMYSKFGNIRY 377
           ++N+P+PE+S F QKGFSQI KEV GKA+HA+ IK   +L++F++NTLI+MYSKFG+I +
Sbjct: 13  LLNHPNPEISCFYQKGFSQITKEVTGKALHALFIKGLVNLTVFYSNTLINMYSKFGHIGF 72

Query: 378 AKQVFDRMPDRNAASWNNMISGY 446
           ++ +FD+M +RN ASWNNM+SG+
Sbjct: 73  SRYLFDKMSERNDASWNNMMSGF 95


>ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355488200|gb|AES69403.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  110 bits (275), Expect = 2e-22
 Identities = 50/83 (60%), Positives = 69/83 (83%)
 Frame = +3

Query: 198 IINNPHPELSGFPQKGFSQINKEVVGKAVHAMCIKDWTHLSIFHTNTLIHMYSKFGNIRY 377
           I N+ +P++S F QKGFS+I++  VGKA+HA+C+KD    + F+TNTL++MYSKFG+I+Y
Sbjct: 141 IRNHSNPQVSRFLQKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKY 200

Query: 378 AKQVFDRMPDRNAASWNNMISGY 446
           A+ VFD+M DRN ASWNNMISG+
Sbjct: 201 AQHVFDKMYDRNDASWNNMISGF 223


>ref|XP_003540076.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 1044

 Score =  109 bits (272), Expect = 4e-22
 Identities = 48/80 (60%), Positives = 63/80 (78%)
 Frame = +3

Query: 207 NPHPELSGFPQKGFSQINKEVVGKAVHAMCIKDWTHLSIFHTNTLIHMYSKFGNIRYAKQ 386
           +P+P++S FPQKGFS I   +VGKA+HA C+K   HL  F  NTLI MYSKFG+I +A+ 
Sbjct: 64  HPNPQVSCFPQKGFSIITDFIVGKALHAFCVKGVIHLGTFQANTLISMYSKFGSIEHAQH 123

Query: 387 VFDRMPDRNAASWNNMISGY 446
           VFD+MP+RN ASWNN++SG+
Sbjct: 124 VFDKMPERNEASWNNLMSGF 143


>ref|XP_002513375.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547283|gb|EEF48778.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 922

 Score =  106 bits (264), Expect = 4e-21
 Identities = 49/81 (60%), Positives = 63/81 (77%)
 Frame = +3

Query: 204 NNPHPELSGFPQKGFSQINKEVVGKAVHAMCIKDWTHLSIFHTNTLIHMYSKFGNIRYAK 383
           N+P+PE+S F QKGFSQI KE  GKA+HA+CIK   +L +F+ NTLI+MYSKFG I  A+
Sbjct: 209 NHPNPEISCFYQKGFSQITKEAPGKALHALCIKGLANLGVFYNNTLINMYSKFGYICLAR 268

Query: 384 QVFDRMPDRNAASWNNMISGY 446
            VFD M ++N ASWN++IS Y
Sbjct: 269 YVFDEMSEKNEASWNHIISAY 289


>gb|EOY14016.1| Tetratricopeptide repeat-like superfamily protein isoform 1
           [Theobroma cacao]
          Length = 1196

 Score =  105 bits (261), Expect = 8e-21
 Identities = 50/92 (54%), Positives = 67/92 (72%)
 Frame = +3

Query: 168 EDPKDNILQCIINNPHPELSGFPQKGFSQINKEVVGKAVHAMCIKDWTHLSIFHTNTLIH 347
           E P ++    + N+P+PE+S F QKGFSQI +E  GKA+HA+CI+    LS+F TNTLI+
Sbjct: 200 EKPGNHATISLSNHPNPEISCFYQKGFSQITRETTGKALHALCIEGLVPLSVFLTNTLIN 259

Query: 348 MYSKFGNIRYAKQVFDRMPDRNAASWNNMISG 443
           MYSKFG I YA+ +FD +  RN ASWN ++SG
Sbjct: 260 MYSKFGLIDYARYLFDHLSVRNTASWNTIMSG 291


>ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata] gi|297338751|gb|EFH69168.1| hypothetical protein
           ARALYDRAFT_889039 [Arabidopsis lyrata subsp. lyrata]
          Length = 1038

 Score =  101 bits (252), Expect = 9e-20
 Identities = 44/77 (57%), Positives = 59/77 (76%)
 Frame = +3

Query: 213 HPELSGFPQKGFSQINKEVVGKAVHAMCIKDWTHLSIFHTNTLIHMYSKFGNIRYAKQVF 392
           +PELS F Q GFSQI +E  G+A+HA+C+K    LS+ HTNTLI+MY+KFG ++ A+ +F
Sbjct: 57  NPELSCFDQTGFSQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLF 116

Query: 393 DRMPDRNAASWNNMISG 443
           D+MP RN  SWN M+SG
Sbjct: 117 DKMPVRNEVSWNTMMSG 133


>gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 45/80 (56%), Positives = 59/80 (73%)
 Frame = +3

Query: 204 NNPHPELSGFPQKGFSQINKEVVGKAVHAMCIKDWTHLSIFHTNTLIHMYSKFGNIRYAK 383
           N+ +PE+S F Q GFSQI  E  G+AVHA+C+K    LS+ HTNTLI+MY+KFG ++ A+
Sbjct: 68  NHWNPEISCFDQIGFSQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPAR 127

Query: 384 QVFDRMPDRNAASWNNMISG 443
            +FD MP RN  SWN M+SG
Sbjct: 128 HLFDIMPVRNEVSWNTMMSG 147


>ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 1724

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 44/72 (61%), Positives = 54/72 (75%)
 Frame = +3

Query: 231 FPQKGFSQINKEVVGKAVHAMCIKDWTHLSIFHTNTLIHMYSKFGNIRYAKQVFDRMPDR 410
           FP KGFS+I  ++ GKA+HA CI    +L IF TNTLI+MYSKFGNI +A+ VFD M  R
Sbjct: 749 FPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHR 808

Query: 411 NAASWNNMISGY 446
           N ASW+ M+SGY
Sbjct: 809 NEASWSTMLSGY 820


>emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 44/72 (61%), Positives = 54/72 (75%)
 Frame = +3

Query: 231 FPQKGFSQINKEVVGKAVHAMCIKDWTHLSIFHTNTLIHMYSKFGNIRYAKQVFDRMPDR 410
           FP KGFS+I  ++ GKA+HA CI    +L IF TNTLI+MYSKFGNI +A+ VFD M  R
Sbjct: 99  FPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHR 158

Query: 411 NAASWNNMISGY 446
           N ASW+ M+SGY
Sbjct: 159 NEASWSTMLSGY 170


>gb|EPS65427.1| hypothetical protein M569_09347, partial [Genlisea aurea]
          Length = 831

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 39/54 (72%), Positives = 43/54 (79%)
 Frame = +3

Query: 285 HAMCIKDWTHLSIFHTNTLIHMYSKFGNIRYAKQVFDRMPDRNAASWNNMISGY 446
           H M +K+   LS+FH NTLI MYS FGNI YA+QVFD MPDRN ASWNNMISGY
Sbjct: 1   HGMFLKEPYRLSVFHANTLIKMYSGFGNIEYARQVFDEMPDRNGASWNNMISGY 54


>ref|XP_006853435.1| hypothetical protein AMTR_s00032p00176600 [Amborella trichopoda]
           gi|548857088|gb|ERN14902.1| hypothetical protein
           AMTR_s00032p00176600 [Amborella trichopoda]
          Length = 711

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 34/70 (48%), Positives = 45/70 (64%)
 Frame = +3

Query: 237 QKGFSQINKEVVGKAVHAMCIKDWTHLSIFHTNTLIHMYSKFGNIRYAKQVFDRMPDRNA 416
           ++GFS+I+    GKA+H + ++    LS+F  NTLI MY+KFG    A  V   MP RN 
Sbjct: 7   RRGFSEISTLNHGKAIHGVSMRKSFKLSLFQNNTLISMYAKFGKFEEAYHVLRAMPVRNE 66

Query: 417 ASWNNMISGY 446
           ASWN +ISGY
Sbjct: 67  ASWNTIISGY 76


>ref|XP_002516589.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544409|gb|EEF45930.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 367

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
 Frame = +3

Query: 240 KGFSQINKEVVGKAVHAMCIKDWTHLSIFHTNTLIHMYSKFGNIRYAKQVFDRMPDRNAA 419
           K  S +N+  +G  +HA C K    + I   N+++ MYSK G I+ A  +FD MP RN  
Sbjct: 18  KASSMLNRPYIGMQIHANCTKSGNDIVIVVANSIVDMYSKCGRIKEAACMFDFMPVRNLI 77

Query: 420 SWNNMISGYE---FPDSSAIIGRE 482
           SWN+MISGY    F + + ++ RE
Sbjct: 78  SWNSMISGYSIAGFGEKAVVLFRE 101


>ref|XP_006836657.1| hypothetical protein AMTR_s00088p00046850 [Amborella trichopoda]
           gi|548839217|gb|ERM99510.1| hypothetical protein
           AMTR_s00088p00046850 [Amborella trichopoda]
          Length = 378

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
 Frame = +3

Query: 180 DNILQCIINNPHPELSGFPQ--KGFSQINKEVVGKAVHAMCIKDWTHLSIFHTNTLIHMY 353
           +  LQC I+ P P      Q     S ++   +G+ VHA  +     ++ F  N L+ MY
Sbjct: 40  EEALQCFIDMPKPCARAHVQALNACSSLSNPWLGRQVHARLVHGLAPMNPFVLNALLGMY 99

Query: 354 SKFGNIRYAKQVFDRMPDRNAASWNNMISGY 446
           +K G I+ A+Q+FD MP RN  SWN MI+ Y
Sbjct: 100 AKCGGIKAARQIFDEMPQRNVVSWNAMIAAY 130


>gb|EOY09326.1| Mitochondrial RNAediting factor 1 [Theobroma cacao]
          Length = 595

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
 Frame = +3

Query: 192 QCIINNPHPELSGFPQ--KGFSQINKEVVGKAVHAMCIKDWTHLSIFHTNTLIHMYSKFG 365
           + ++NN  P+   FP   K  + + +  +G+++H + +K    + +F  ++L+ MY K G
Sbjct: 113 EMLVNNIKPDDHIFPSATKSCATLGRFDLGQSIHCLILKTGYDMDVFVASSLVDMYGKCG 172

Query: 366 NIRYAKQVFDRMPDRNAASWNNMISGY 446
            I  A++VFD MP+RN  SW  MI GY
Sbjct: 173 KINVARKVFDEMPERNVVSWTGMIYGY 199


>ref|XP_006844123.1| hypothetical protein AMTR_s00006p00257020 [Amborella trichopoda]
           gi|548846522|gb|ERN05798.1| hypothetical protein
           AMTR_s00006p00257020 [Amborella trichopoda]
          Length = 965

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 28/58 (48%), Positives = 41/58 (70%)
 Frame = +3

Query: 273 GKAVHAMCIKDWTHLSIFHTNTLIHMYSKFGNIRYAKQVFDRMPDRNAASWNNMISGY 446
           GK +H + +K   +   F TN LI++Y+K  N+ YA++VFDRMP +N  SWN+MI+GY
Sbjct: 442 GKKLHCLILKTVENTDTFVTNNLINLYAKSWNLSYARRVFDRMPHKNLISWNSMITGY 499


>ref|XP_004301443.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Fragaria vesca subsp. vesca]
          Length = 590

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 27/69 (39%), Positives = 45/69 (65%)
 Frame = +3

Query: 240 KGFSQINKEVVGKAVHAMCIKDWTHLSIFHTNTLIHMYSKFGNIRYAKQVFDRMPDRNAA 419
           K  + +N+  VG+++H + +K   H+ +F  ++++ MY+K G I  A+ +FD MP RN  
Sbjct: 126 KSCAILNRIDVGQSIHCLALKTGYHVDVFVASSVVDMYAKCGQISNARNMFDEMPHRNVV 185

Query: 420 SWNNMISGY 446
           SW+ MISGY
Sbjct: 186 SWSGMISGY 194


>gb|EXB53136.1| hypothetical protein L484_006956 [Morus notabilis]
          Length = 616

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 30/83 (36%), Positives = 51/83 (61%)
 Frame = +3

Query: 240 KGFSQINKEVVGKAVHAMCIKDWTHLSIFHTNTLIHMYSKFGNIRYAKQVFDRMPDRNAA 419
           K  + + +   GK VH + IK   +  +F  ++++ M++K G IR A++VFD+MP+RN  
Sbjct: 152 KSIAILGRIDAGKCVHGLVIKTGFNSDVFVGSSMVDMFAKCGEIRDARKVFDKMPERNVV 211

Query: 420 SWNNMISGYEFPDSSAIIGREEK 488
           SW+ MISGY       ++G +E+
Sbjct: 212 SWSGMISGY------VLLGEDEE 228