BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00027086
         (1304 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       499   e-138
emb|CBI17549.3| unnamed protein product [Vitis vinifera]              421   e-115
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   412   e-112
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati...   407   e-111
gb|EOX91149.1| Transcription regulators,zinc ion binding, putati...   407   e-111
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo...   407   e-111
gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]          393   e-107
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr...   390   e-106
ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citr...   390   e-106
ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III s...   385   e-104
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s...   385   e-104
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s...   382   e-103
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu...   378   e-102
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   378   e-102
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s...   375   e-101
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor...   375   e-101
gb|ABU45189.1| unknown [Capsicum frutescens]                          366   1e-98
ref|XP_006363147.1| PREDICTED: DNA-directed RNA polymerase III s...   358   2e-96
ref|XP_004232385.1| PREDICTED: uncharacterized protein LOC101252...   357   6e-96
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   355   2e-95

>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  499 bits (1284), Expect = e-138
 Identities = 252/428 (58%), Positives = 306/428 (71%), Gaps = 16/428 (3%)
 Frame = -1

Query: 1238 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1059
            IDVY TP +DP T+LYVLQYPLRPLWRPYELD+ CEEVRVK  SAEVE+DLAVDVDSKNY
Sbjct: 111  IDVYLTPSIDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNY 170

Query: 1058 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 879
            DS ADPRV M KQ LT+ WKPP  +G+AVGVL GNKL+LNPIH VVQLRPS+QH +   S
Sbjct: 171  DSDADPRVSMTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESS 230

Query: 878  KRKTVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTAR 699
            KR+T  SSN+ D  K EE               + EQ KD+ EDW+PL YH   SD++  
Sbjct: 231  KRRTTASSNLEDNTKGEEVTTGSLKKQGKPSGPVIEQNKDTREDWIPLNYHGARSDISMS 290

Query: 698  YLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTWLLE 519
            Y++KM   + S I FSM+ D Y+N+LCPG  + +  S GPS R LL+LPL ERFRTWLL+
Sbjct: 291  YVRKMVEHDSSHIQFSMNHD-YVNTLCPGTSNENNGSNGPS-RVLLSLPLEERFRTWLLQ 348

Query: 518  GPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGTDQGIEVLARDYVL 339
            GPP+HRF+ALKHLAPD SVE++L VL  HA+LVQGLW+PKSSL+YG DQGI+ LARDYVL
Sbjct: 349  GPPIHRFDALKHLAPDASVEDILAVLSQHAQLVQGLWIPKSSLLYGKDQGIDALARDYVL 408

Query: 338  LLFSKKAIIKKSQLPTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKSNPSVVK 159
            LLFS+  II  SQLP +  L  AM DVL+ +A ER +  DWK +E PD +F+K NP +V+
Sbjct: 409  LLFSRTPIINNSQLPQQQKLNRAMRDVLDTVAFERVSLNDWKFKEPPDMTFIKLNPKIVR 468

Query: 158  KQEEEWERLENRIKDHVCGGRNRPGMRSN----TTNNPAT*KSSSNLA------------ 27
            +QE+ WERLE  I + + G +NRP  +++    TTNNPAT KS S  A            
Sbjct: 469  EQEQTWERLEKLITEKIFGDKNRPATKNSSRPLTTNNPATSKSLSKHASNSLNAGVPRRP 528

Query: 26   MAEEVREA 3
            M+EE REA
Sbjct: 529  MSEETREA 536


>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  421 bits (1082), Expect = e-115
 Identities = 218/396 (55%), Positives = 274/396 (69%), Gaps = 6/396 (1%)
 Frame = -1

Query: 1238 IDVYFTPF-VDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKN 1062
            IDV+FTP   D  T++YVLQYPLRP WRPYEL E C+EVRVKP SAEVE+DL++DVDSKN
Sbjct: 106  IDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKN 165

Query: 1061 YDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRE 882
            YD  A    +MKKQ L+  WKPP  +G+ VGVL GNKL+LNPIH VVQLRPS+++L S  
Sbjct: 166  YDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGG 225

Query: 881  SKRKTVGSSNVNDTVK----SEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGS 714
            +KRK   + + N  VK    +EE               + EQ  D+ E WVPLKYHS+ S
Sbjct: 226  AKRKNNVTGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLKYHSSES 285

Query: 713  DLTARYLQKMKAQEGSQISFSMSSDDYLNSLCP-GAYSGSFSSKGPSIRFLLTLPLRERF 537
            D +ARYLQKM A++ S I F MS  +Y+NSLCP G  +    SKG S RFLL++PL ERF
Sbjct: 286  DFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERF 345

Query: 536  RTWLLEGPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGTDQGIEVL 357
            +T L EGPP+HRF+ALKH APD SVE+VLGVL  HA LVQGLWVPKSSL++   QG+  L
Sbjct: 346  KTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPL 405

Query: 356  ARDYVLLLFSKKAIIKKSQLPTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKS 177
            ARDY+LLLFSK  +I  SQ+    +L  A+   L++LAVER +F+DWK +E  D SF+K 
Sbjct: 406  ARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKL 465

Query: 176  NPSVVKKQEEEWERLENRIKDHVCGGRNRPGMRSNT 69
            +P +V++Q   WE LE +I D + GG  R  +  N+
Sbjct: 466  HPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNS 501


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
            vinifera]
          Length = 672

 Score =  412 bits (1059), Expect = e-112
 Identities = 216/394 (54%), Positives = 273/394 (69%), Gaps = 4/394 (1%)
 Frame = -1

Query: 1238 IDVYFTPF-VDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKN 1062
            IDV+FTP   D  T++YVLQYPLRP WRPYEL E C+EVRVKP SAEVE+DL++DVDSKN
Sbjct: 106  IDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKN 165

Query: 1061 YDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRE 882
            YD  A    +MKKQ L+  WKPP  +G+ VGVL GNKL+LNPIH VVQLRPS+++L S  
Sbjct: 166  YDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGG 225

Query: 881  SKRKTVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDS--EEDWVPLKYHSTGSDL 708
            +KRK   + + N  VK E   E              E++  S  ++ WVPLKYHS+ SD 
Sbjct: 226  AKRKNNVTGDTNSAVKLEVSNE--------------EESVGSLKKQSWVPLKYHSSESDF 271

Query: 707  TARYLQKMKAQEGSQISFSMSSDDYLNSLCP-GAYSGSFSSKGPSIRFLLTLPLRERFRT 531
            +ARYLQKM A++ S I F MS  +Y+NSLCP G  +    SKG S RFLL++PL ERF+T
Sbjct: 272  SARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKT 331

Query: 530  WLLEGPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGTDQGIEVLAR 351
             L EGPP+HRF+ALKH APD SVE+VLGVL  HA LVQGLWVPKSSL++   QG+  LAR
Sbjct: 332  LLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLAR 391

Query: 350  DYVLLLFSKKAIIKKSQLPTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKSNP 171
            DY+LLLFSK  +I  SQ+    +L  A+   L++LAVER +F+DWK +E  D SF+K +P
Sbjct: 392  DYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHP 451

Query: 170  SVVKKQEEEWERLENRIKDHVCGGRNRPGMRSNT 69
             +V++Q   WE LE +I D + GG  R  +  N+
Sbjct: 452  DIVREQRRVWESLEKQITDIIHGGGRRGPVTKNS 485


>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
            [Theobroma cacao]
          Length = 736

 Score =  407 bits (1045), Expect = e-111
 Identities = 220/431 (51%), Positives = 281/431 (65%), Gaps = 19/431 (4%)
 Frame = -1

Query: 1238 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1059
            IDV+FTP +D  T+LYVLQYPLRP WRPYELDE CEEVRVKP S EVE+DLAVDVDS NY
Sbjct: 125  IDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNY 184

Query: 1058 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 879
            DS    R++M KQ L++ W PP  +G+AVGVL G+KL+LNPIH VVQLRPS+ HL+   S
Sbjct: 185  DSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVS 244

Query: 878  KRKTVGSSNVNDTVKSEEPQE----XXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSD 711
            KRK   +++   TVK EEP +                  EQ  D +E WVPLKYHS+ +D
Sbjct: 245  KRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKND 304

Query: 710  LTARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRT 531
             +A+YLQ+M A+E  +I F+MS  DY++SLCPGA S +  ++GPS R LL++PL ER + 
Sbjct: 305  FSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGA-SNNNKAQGPSRRLLLSIPLEERLKK 363

Query: 530  WLLEGPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGTDQGIEVLAR 351
             L EGPP HRF+ALKH APD S+E++  VLQ HA LVQGLWVPKSSL++  D   + LAR
Sbjct: 364  LLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDP-YKSLAR 422

Query: 350  DYVLLLFSKKAIIKKSQL-PTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKSN 174
            DYVLLLFSK  II  +Q+    P+    +   L +LA+ER +FKDWKL+E  D  F K  
Sbjct: 423  DYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLY 482

Query: 173  PSVVKKQEEEWERLENRIKDHVCGG------RNRPG--------MRSNTTNNPAT*KSSS 36
            P +VK QE+ W   E+ + +H+C G      R +PG        M S+           +
Sbjct: 483  PDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQA 542

Query: 35   NLAMAEEVREA 3
               M++E REA
Sbjct: 543  GRTMSDETREA 553


>gb|EOX91149.1| Transcription regulators,zinc ion binding, putative isoform 2
            [Theobroma cacao]
          Length = 588

 Score =  407 bits (1045), Expect = e-111
 Identities = 220/431 (51%), Positives = 281/431 (65%), Gaps = 19/431 (4%)
 Frame = -1

Query: 1238 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1059
            IDV+FTP +D  T+LYVLQYPLRP WRPYELDE CEEVRVKP S EVE+DLAVDVDS NY
Sbjct: 28   IDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNY 87

Query: 1058 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 879
            DS    R++M KQ L++ W PP  +G+AVGVL G+KL+LNPIH VVQLRPS+ HL+   S
Sbjct: 88   DSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVS 147

Query: 878  KRKTVGSSNVNDTVKSEEPQE----XXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSD 711
            KRK   +++   TVK EEP +                  EQ  D +E WVPLKYHS+ +D
Sbjct: 148  KRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKND 207

Query: 710  LTARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRT 531
             +A+YLQ+M A+E  +I F+MS  DY++SLCPGA S +  ++GPS R LL++PL ER + 
Sbjct: 208  FSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGA-SNNNKAQGPSRRLLLSIPLEERLKK 266

Query: 530  WLLEGPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGTDQGIEVLAR 351
             L EGPP HRF+ALKH APD S+E++  VLQ HA LVQGLWVPKSSL++  D   + LAR
Sbjct: 267  LLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDP-YKSLAR 325

Query: 350  DYVLLLFSKKAIIKKSQL-PTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKSN 174
            DYVLLLFSK  II  +Q+    P+    +   L +LA+ER +FKDWKL+E  D  F K  
Sbjct: 326  DYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLY 385

Query: 173  PSVVKKQEEEWERLENRIKDHVCGG------RNRPG--------MRSNTTNNPAT*KSSS 36
            P +VK QE+ W   E+ + +H+C G      R +PG        M S+           +
Sbjct: 386  PDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQA 445

Query: 35   NLAMAEEVREA 3
               M++E REA
Sbjct: 446  GRTMSDETREA 456


>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  407 bits (1045), Expect = e-111
 Identities = 220/431 (51%), Positives = 281/431 (65%), Gaps = 19/431 (4%)
 Frame = -1

Query: 1238 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1059
            IDV+FTP +D  T+LYVLQYPLRP WRPYELDE CEEVRVKP S EVE+DLAVDVDS NY
Sbjct: 125  IDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNY 184

Query: 1058 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 879
            DS    R++M KQ L++ W PP  +G+AVGVL G+KL+LNPIH VVQLRPS+ HL+   S
Sbjct: 185  DSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVS 244

Query: 878  KRKTVGSSNVNDTVKSEEPQE----XXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSD 711
            KRK   +++   TVK EEP +                  EQ  D +E WVPLKYHS+ +D
Sbjct: 245  KRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKND 304

Query: 710  LTARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRT 531
             +A+YLQ+M A+E  +I F+MS  DY++SLCPGA S +  ++GPS R LL++PL ER + 
Sbjct: 305  FSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGA-SNNNKAQGPSRRLLLSIPLEERLKK 363

Query: 530  WLLEGPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGTDQGIEVLAR 351
             L EGPP HRF+ALKH APD S+E++  VLQ HA LVQGLWVPKSSL++  D   + LAR
Sbjct: 364  LLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDP-YKSLAR 422

Query: 350  DYVLLLFSKKAIIKKSQL-PTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKSN 174
            DYVLLLFSK  II  +Q+    P+    +   L +LA+ER +FKDWKL+E  D  F K  
Sbjct: 423  DYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLY 482

Query: 173  PSVVKKQEEEWERLENRIKDHVCGG------RNRPG--------MRSNTTNNPAT*KSSS 36
            P +VK QE+ W   E+ + +H+C G      R +PG        M S+           +
Sbjct: 483  PDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQA 542

Query: 35   NLAMAEEVREA 3
               M++E REA
Sbjct: 543  GRTMSDETREA 553


>gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]
          Length = 666

 Score =  393 bits (1010), Expect = e-107
 Identities = 220/436 (50%), Positives = 282/436 (64%), Gaps = 24/436 (5%)
 Frame = -1

Query: 1238 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1059
            ID+YFTP +DP T+LYVLQ P+RP+WRPYEL+E C+EVR++PT+A++E+DLA+D DSKN+
Sbjct: 100  IDMYFTPSLDPNTQLYVLQSPMRPVWRPYELEERCKEVRLRPTTAQMEVDLAIDFDSKNF 159

Query: 1058 DSGADPRVQMKKQILTALW--KPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESR 885
            D  +    +M+KQ ++  W   P   SG+AVGVL G+KL+LNPIHTVVQLRPS QHL+  
Sbjct: 160  DRDSIYAEKMEKQTVSTSWIPVPTGTSGYAVGVLIGDKLHLNPIHTVVQLRPSKQHLKES 219

Query: 884  ESKRKTVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLT 705
            E K K + +SN   TV++EE +E           K P   KD EE WV LKYH   S+++
Sbjct: 220  ELK-KNIATSNDEKTVENEEIKENKPVAPSKKQNKPPGNDKDIEEHWVHLKYHGARSEIS 278

Query: 704  ARYLQKMKAQEGSQISFSMSSD----------DYLNSLCPGAYSGSFSSKGPSIRFLLTL 555
            ARYLQ+M  +EGS I FSMS            DYL +LCPG  + +   K   IR +  L
Sbjct: 279  ARYLQRMAMEEGSPIPFSMSLAFFSVNLIHRVDYLRTLCPGRPNDTDKYKDLRIR-VSQL 337

Query: 554  PLRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGTD 375
            PL ERFRTWL EGPP+HRF ALKHLA D  VEE+L VLQ +A++VQGLWVPKSSLVYG +
Sbjct: 338  PLDERFRTWLHEGPPIHRFGALKHLALDNPVEEILEVLQRYAQVVQGLWVPKSSLVYGRN 397

Query: 374  QGIEVLARDYVLLLFSKKAIIKKSQLPTRPTLANAMIDVLNVLAVEREAFKDWKLRELPD 195
             G EVLARD+VL  FSK   IK+S    +P    A    L +LAVER    DWKL+E PD
Sbjct: 398  DGHEVLARDFVLFEFSKSPFIKQSVFDRKPEFFKAATPALKLLAVERPDLNDWKLKEHPD 457

Query: 194  FSFVKSNPSVVKKQEEEWERLENRIKDHVCGGRNRPGMRSNTTNNPA------------T 51
              F      +VK+Q+  WERL  +I   + GGRNRP M++   +NP+            T
Sbjct: 458  KEFENLYGDLVKEQQVTWERLGKQIYGLLAGGRNRPTMKN--PSNPSAGIPALPSGGKPT 515

Query: 50   *KSSSNLAMAEEVREA 3
             +S +  +M+E  REA
Sbjct: 516  PRSVTRTSMSERTREA 531


>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
            gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC5-like [Citrus sinensis]
            gi|557527707|gb|ESR38957.1| hypothetical protein
            CICLE_v10025048mg [Citrus clementina]
          Length = 690

 Score =  390 bits (1001), Expect = e-106
 Identities = 199/396 (50%), Positives = 268/396 (67%), Gaps = 1/396 (0%)
 Frame = -1

Query: 1238 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1059
            IDV+FTP +D  ++LYV+QYPLRPLWRPYELDE CEEVRVKP+++EVE+DL++DVDS N+
Sbjct: 117  IDVFFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNW 176

Query: 1058 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 879
            DS    R+ M KQ L+  W PP  +G+A+GVL GNKL+LNPIH VVQLR S+  L+S  S
Sbjct: 177  DSEKASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKSGGS 236

Query: 878  KRKTVGSSNVNDTVK-SEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTA 702
            KRK   +S +   ++ S + +               EQ  + EE WVPLKYH + SD +A
Sbjct: 237  KRKNNVASEIPVKLEDSNQDKSVGSSKKQNKRMGSIEQRSNEEECWVPLKYHGSKSDFSA 296

Query: 701  RYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTWLL 522
            RYLQ+M  +E S I F+M+  DY++SLCPGA S +  SKGPS RFLL++PL ERF+  L 
Sbjct: 297  RYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMPLEERFKKLLC 356

Query: 521  EGPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGTDQGIEVLARDYV 342
            EG P+ RF+ L H AP+++VE+V+GVL  +  LVQGLW P+S L++  D+ ++ LARDYV
Sbjct: 357  EGEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLFNNDK-MKCLARDYV 415

Query: 341  LLLFSKKAIIKKSQLPTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKSNPSVV 162
            LL FSK +++K   L   P L + +   LN+ AVER  FKDWK R+  D SF+K +P++V
Sbjct: 416  LLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQTDLSFIKEHPNIV 475

Query: 161  KKQEEEWERLENRIKDHVCGGRNRPGMRSNTTNNPA 54
             KQE+ W   E +I D +    N+ G   +T  N A
Sbjct: 476  IKQEQVWAAAEKQITDVI----NKLGKSGSTLRNDA 507


>ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
            gi|557527706|gb|ESR38956.1| hypothetical protein
            CICLE_v10025048mg [Citrus clementina]
          Length = 637

 Score =  390 bits (1001), Expect = e-106
 Identities = 199/396 (50%), Positives = 268/396 (67%), Gaps = 1/396 (0%)
 Frame = -1

Query: 1238 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1059
            IDV+FTP +D  ++LYV+QYPLRPLWRPYELDE CEEVRVKP+++EVE+DL++DVDS N+
Sbjct: 117  IDVFFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNW 176

Query: 1058 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 879
            DS    R+ M KQ L+  W PP  +G+A+GVL GNKL+LNPIH VVQLR S+  L+S  S
Sbjct: 177  DSEKASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKSGGS 236

Query: 878  KRKTVGSSNVNDTVK-SEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTA 702
            KRK   +S +   ++ S + +               EQ  + EE WVPLKYH + SD +A
Sbjct: 237  KRKNNVASEIPVKLEDSNQDKSVGSSKKQNKRMGSIEQRSNEEECWVPLKYHGSKSDFSA 296

Query: 701  RYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTWLL 522
            RYLQ+M  +E S I F+M+  DY++SLCPGA S +  SKGPS RFLL++PL ERF+  L 
Sbjct: 297  RYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMPLEERFKKLLC 356

Query: 521  EGPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGTDQGIEVLARDYV 342
            EG P+ RF+ L H AP+++VE+V+GVL  +  LVQGLW P+S L++  D+ ++ LARDYV
Sbjct: 357  EGEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLFNNDK-MKCLARDYV 415

Query: 341  LLLFSKKAIIKKSQLPTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKSNPSVV 162
            LL FSK +++K   L   P L + +   LN+ AVER  FKDWK R+  D SF+K +P++V
Sbjct: 416  LLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQTDLSFIKEHPNIV 475

Query: 161  KKQEEEWERLENRIKDHVCGGRNRPGMRSNTTNNPA 54
             KQE+ W   E +I D +    N+ G   +T  N A
Sbjct: 476  IKQEQVWAAAEKQITDVI----NKLGKSGSTLRNDA 507


>ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X4 [Solanum tuberosum]
          Length = 536

 Score =  385 bits (988), Expect = e-104
 Identities = 213/424 (50%), Positives = 277/424 (65%), Gaps = 12/424 (2%)
 Frame = -1

Query: 1238 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1059
            IDV   P  DP T+LYV QYPLR +WRPYEL+E C+EVR++P++AE+E+DLA+D+DSKN+
Sbjct: 98   IDVCINPSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNF 157

Query: 1058 DSGADPRVQMKKQILTALWKP--PHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESR 885
            D  +     +KKQ+L+  W P     SG+AVGVL G+KL+LNP+H VVQLRPS ++L+  
Sbjct: 158  DRDSVHAATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKES 217

Query: 884  ESKRKTVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLT 705
            E K K V ++N   +V++E+ +E           K P   KD  E W+ LKYH   SD++
Sbjct: 218  ELK-KNVTTNNDEKSVENEDVKEKRPMGPSKKQNKPPGIEKDIGEHWLHLKYHGARSDIS 276

Query: 704  ARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTWL 525
            ARYLQKM  +EGS + FSMS  DYLN+  PG  + +   K    R L  LPL ER RTWL
Sbjct: 277  ARYLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEERVRTWL 335

Query: 524  LEGPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGTDQGIEVLARDY 345
            LEGPP+HRF+ALKHLAPD S +E++ VLQ +A+LVQGLWVPKSSLVYGT+ G+EVLAR++
Sbjct: 336  LEGPPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNF 395

Query: 344  VLLLFSKKAIIKKSQLPTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKSNPSV 165
            VL  F+K  +IKKS    RP    A    L  LAVER    DWKL+E PD  F      V
Sbjct: 396  VLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDV 455

Query: 164  VKKQEEEWERLENRIKDHVCGGRNRPGMRSNTTNN---PA-------T*KSSSNLAMAEE 15
            V++++  WE L  +I D + GGRNRP M++    N   PA       T  S    +M+EE
Sbjct: 456  VREKQATWECLGKQINDVLPGGRNRPTMKNPLNPNADIPALPSGDKPTSSSLLRTSMSEE 515

Query: 14   VREA 3
            +REA
Sbjct: 516  IREA 519


>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X1 [Solanum tuberosum]
          Length = 669

 Score =  385 bits (988), Expect = e-104
 Identities = 213/424 (50%), Positives = 277/424 (65%), Gaps = 12/424 (2%)
 Frame = -1

Query: 1238 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1059
            IDV   P  DP T+LYV QYPLR +WRPYEL+E C+EVR++P++AE+E+DLA+D+DSKN+
Sbjct: 98   IDVCINPSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNF 157

Query: 1058 DSGADPRVQMKKQILTALWKP--PHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESR 885
            D  +     +KKQ+L+  W P     SG+AVGVL G+KL+LNP+H VVQLRPS ++L+  
Sbjct: 158  DRDSVHAATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKES 217

Query: 884  ESKRKTVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLT 705
            E K K V ++N   +V++E+ +E           K P   KD  E W+ LKYH   SD++
Sbjct: 218  ELK-KNVTTNNDEKSVENEDVKEKRPMGPSKKQNKPPGIEKDIGEHWLHLKYHGARSDIS 276

Query: 704  ARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTWL 525
            ARYLQKM  +EGS + FSMS  DYLN+  PG  + +   K    R L  LPL ER RTWL
Sbjct: 277  ARYLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEERVRTWL 335

Query: 524  LEGPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGTDQGIEVLARDY 345
            LEGPP+HRF+ALKHLAPD S +E++ VLQ +A+LVQGLWVPKSSLVYGT+ G+EVLAR++
Sbjct: 336  LEGPPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNF 395

Query: 344  VLLLFSKKAIIKKSQLPTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKSNPSV 165
            VL  F+K  +IKKS    RP    A    L  LAVER    DWKL+E PD  F      V
Sbjct: 396  VLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDV 455

Query: 164  VKKQEEEWERLENRIKDHVCGGRNRPGMRSNTTNN---PA-------T*KSSSNLAMAEE 15
            V++++  WE L  +I D + GGRNRP M++    N   PA       T  S    +M+EE
Sbjct: 456  VREKQATWECLGKQINDVLPGGRNRPTMKNPLNPNADIPALPSGDKPTSSSLLRTSMSEE 515

Query: 14   VREA 3
            +REA
Sbjct: 516  IREA 519


>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
            lycopersicum]
          Length = 669

 Score =  382 bits (982), Expect = e-103
 Identities = 208/424 (49%), Positives = 277/424 (65%), Gaps = 12/424 (2%)
 Frame = -1

Query: 1238 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1059
            IDV   P  DP T+LYV QYPL+ +WRPYEL+E C+EVR++P++AE+E+DLA+D+DSKN+
Sbjct: 98   IDVCINPSFDPSTQLYVFQYPLKAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNF 157

Query: 1058 DSGADPRVQMKKQILTALW--KPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESR 885
            D  +     +KKQ+L+  W   P   SG+AVGVL G+KL+LNP+H VVQLRPS ++L+  
Sbjct: 158  DRDSVHAATVKKQMLSTSWIPLPTCTSGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKES 217

Query: 884  ESKRKTVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLT 705
            E K+  + ++N   +V++E+ +E           K P   KD  E W+ LKYH   SD++
Sbjct: 218  ELKKNII-TNNDEKSVENEDVKEKRPVGPSKKQNKSPGIEKDIGEHWLHLKYHGARSDIS 276

Query: 704  ARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTWL 525
            ARYLQKM  +EGS + FSMS  DYLN+ CPG  + +   K    R L  LPL ER R WL
Sbjct: 277  ARYLQKMSMEEGSPVPFSMSPVDYLNAFCPGRPTDTDRLKILRTR-LSQLPLEERVRIWL 335

Query: 524  LEGPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGTDQGIEVLARDY 345
            LEGPP+HRF+AL HLAPD S +E++ VLQ +A+LVQGLWVPKSSLVYGT+ G+EVLAR++
Sbjct: 336  LEGPPIHRFDALMHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNF 395

Query: 344  VLLLFSKKAIIKKSQLPTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKSNPSV 165
            VL  F+K  +IKKS    RP    A    L  LAVER    DWKL+E PD  F      V
Sbjct: 396  VLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDV 455

Query: 164  VKKQEEEWERLENRIKDHVCGGRNRPGMRSNTTNN------PAT*KSSSN----LAMAEE 15
            V++Q+  WE L  +I D + GGR RP M++    N      P+  K +S+     +M+EE
Sbjct: 456  VREQQATWECLGKQINDVLPGGRTRPTMKNPINRNADITALPSGDKPTSSSLLRTSMSEE 515

Query: 14   VREA 3
            +REA
Sbjct: 516  IREA 519


>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
            gi|550334731|gb|EEE90658.2| hypothetical protein
            POPTR_0007s12540g [Populus trichocarpa]
          Length = 667

 Score =  378 bits (971), Expect = e-102
 Identities = 203/418 (48%), Positives = 266/418 (63%), Gaps = 6/418 (1%)
 Frame = -1

Query: 1238 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1059
            IDVY+TP VDP T+LYV+QYPLRP WRPYELDE C+EVRVKP S EVE+DL++D D+KNY
Sbjct: 115  IDVYYTPSVDPNTQLYVMQYPLRPCWRPYELDERCKEVRVKPESTEVEVDLSID-DTKNY 173

Query: 1058 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 879
            D     R+ MKKQ L++ W PP  +G+AVGVL GNKL+LNPIH VVQLRPS+ +L S  S
Sbjct: 174  DPDIASRLNMKKQTLSSSWSPPPATGYAVGVLIGNKLHLNPIHAVVQLRPSMDYLSSGNS 233

Query: 878  KRKTVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIP-EQTKDSEEDWVPLKYHSTGSDLTA 702
            K    G  N      S E +                EQ  D EE W+PLKYH + SDL++
Sbjct: 234  K----GKKNATSGEDSNEGKPLGLPKKQSKQMSSGNEQKPDVEESWIPLKYHGSKSDLSS 289

Query: 701  RYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTWLL 522
            RYLQ M A E S I F+M+  DY++SLCPG  + +    GPS R LL+LPL ER +   L
Sbjct: 290  RYLQNMVAPESSTIEFAMNPYDYMSSLCPGISNNNIKLNGPSRRVLLSLPLEERIKRLFL 349

Query: 521  EGPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGT---DQGIEVLAR 351
            EGPP+HRF AL+HL P++S+E++L VLQ++ +LVQGLWVPK+SL++      + +++ AR
Sbjct: 350  EGPPIHRFAALRHLIPNDSIEDLLIVLQEYGQLVQGLWVPKTSLLFPNPKPTEKVKLAAR 409

Query: 350  DYVLLLFSKKAIIKKSQL--PTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKS 177
            DY+LLLFSK  ++  S+L  P +P +  +    LN+ AVER +FKDWK +E  D  FV+ 
Sbjct: 410  DYILLLFSKSLVVTPSELNVPMKPLILKSF---LNIFAVERPSFKDWKFKENVDTLFVEL 466

Query: 176  NPSVVKKQEEEWERLENRIKDHVCGGRNRPGMRSNTTNNPAT*KSSSNLAMAEEVREA 3
             P +V+KQE+ WE +   I       R    +  N    P          M +E REA
Sbjct: 467  YPDIVRKQEQAWEVMGKNIS--AAFDRAGKSVSKNVITKP-------KKTMTDETREA 515


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 677

 Score =  378 bits (971), Expect = e-102
 Identities = 203/415 (48%), Positives = 267/415 (64%), Gaps = 11/415 (2%)
 Frame = -1

Query: 1238 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1059
            IDV+FTP +D  T+LYV+QYPLRP WRPYELDE CEEVRVKP S EVE+DL +D DS N+
Sbjct: 121  IDVFFTPSIDSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEVDLTID-DSSNW 179

Query: 1058 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 879
            D     +   KKQ L+  + PP ++G+AVGVL GNKL+LNPIH VVQLRPS++H+ S +S
Sbjct: 180  DPAQASKYNFKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVVQLRPSLEHVNSNDS 239

Query: 878  KRKTVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTAR 699
            KRK   S+ +N  VK E+  E                    ++ W+ LKYH + SD ++R
Sbjct: 240  KRKN--SATLNPEVKLEDSNEGKPIG------------SSKKQCWISLKYHGSKSDFSSR 285

Query: 698  YLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTWLLE 519
            YL+KM AQE S + F+M+  DY++SLCP A +    SKGP  RFLL+LPL ER +  +LE
Sbjct: 286  YLEKMIAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLPLAERLKKLILE 345

Query: 518  GPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVY---GTDQGIEVLARD 348
            GPP+ RF+ LKH APD+SVE+VL VLQ++ +LVQGLW PKSSL++    + QGI    RD
Sbjct: 346  GPPVQRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLFPDANSKQGI----RD 401

Query: 347  YVLLLFSKKAIIKKSQLPTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKSNPS 168
            YVLLLFSK  +I  SQ+     +   +   LN+ AVER +FKDWK +E  D +F+K  P 
Sbjct: 402  YVLLLFSKNLVINSSQVNFPVKIKEEIKSFLNLFAVERPSFKDWKFKEHTDTTFIKLYPD 461

Query: 167  VVKKQEEEWERLENRI--------KDHVCGGRNRPGMRSNTTNNPAT*KSSSNLA 27
            +VKKQEE W+  E R+        K  +     +P M  NT  +  + KS   +A
Sbjct: 462  IVKKQEEAWDNTEKRLSKVFDRSGKASMKNAIPKPPMVHNTVKHLDSEKSMPKIA 516


>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X2 [Solanum tuberosum]
          Length = 657

 Score =  375 bits (964), Expect = e-101
 Identities = 208/424 (49%), Positives = 274/424 (64%), Gaps = 12/424 (2%)
 Frame = -1

Query: 1238 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1059
            IDV   P  DP T+LYV QYPLR +WRPYEL+E C+EVR++P++AE+E+DLA+D+DSKN+
Sbjct: 98   IDVCINPSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNF 157

Query: 1058 DSGADPRVQMKKQILTALWKP--PHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESR 885
            D  +     +KKQ+L+  W P     SG+AVGVL G+KL+LNP+H VVQLRPS ++L+  
Sbjct: 158  DRDSVHAATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKES 217

Query: 884  ESKRKTVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLT 705
            E K K V ++N   +V++E+ +E                    ++ W+ LKYH   SD++
Sbjct: 218  ELK-KNVTTNNDEKSVENEDVKEKRPMGP------------SKKQHWLHLKYHGARSDIS 264

Query: 704  ARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTWL 525
            ARYLQKM  +EGS + FSMS  DYLN+  PG  + +   K    R L  LPL ER RTWL
Sbjct: 265  ARYLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEERVRTWL 323

Query: 524  LEGPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGTDQGIEVLARDY 345
            LEGPP+HRF+ALKHLAPD S +E++ VLQ +A+LVQGLWVPKSSLVYGT+ G+EVLAR++
Sbjct: 324  LEGPPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNF 383

Query: 344  VLLLFSKKAIIKKSQLPTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKSNPSV 165
            VL  F+K  +IKKS    RP    A    L  LAVER    DWKL+E PD  F      V
Sbjct: 384  VLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDV 443

Query: 164  VKKQEEEWERLENRIKDHVCGGRNRPGMRSNTTNN---PA-------T*KSSSNLAMAEE 15
            V++++  WE L  +I D + GGRNRP M++    N   PA       T  S    +M+EE
Sbjct: 444  VREKQATWECLGKQINDVLPGGRNRPTMKNPLNPNADIPALPSGDKPTSSSLLRTSMSEE 503

Query: 14   VREA 3
            +REA
Sbjct: 504  IREA 507


>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
          Length = 732

 Score =  375 bits (963), Expect = e-101
 Identities = 203/397 (51%), Positives = 254/397 (63%), Gaps = 7/397 (1%)
 Frame = -1

Query: 1238 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1059
            IDV+F P +D  T+LYVLQYPLRP WRPYELDE CEEVRVKP S+EVE+DL++DVDSKNY
Sbjct: 114  IDVFFNPKIDEGTQLYVLQYPLRPSWRPYELDERCEEVRVKPASSEVEMDLSLDVDSKNY 173

Query: 1058 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 879
            D     R+ M KQ L   W  P  + +AVGVL GNKL+LN IH V+QLRPS++HL S  S
Sbjct: 174  DPDCGDRLNMTKQTLCCSWDQPRATRYAVGVLMGNKLHLNRIHAVMQLRPSLKHLISAGS 233

Query: 878  KRKTVGSSNVNDTVKSEEPQE----XXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSD 711
            K+K     +  DTVK EE                     +Q    EE WVPLKYH + S+
Sbjct: 234  KKKNNVKVDAEDTVKLEESSGKKAIGSSKKQIKQENSSVKQKIADEEGWVPLKYHGSESE 293

Query: 710  LTARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRT 531
             + RYL+KM  QE S + F+MS  DYLNSLCPG+       KGPS R LL+LPL ER ++
Sbjct: 294  SSVRYLRKMAVQESSPLQFTMSPYDYLNSLCPGSCKNGNEPKGPSRRALLSLPLEERIKS 353

Query: 530  WLLEG-PPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGT--DQGIEV 360
             L EG  P+HRF+ LKH APD + +E+L  LQ+HA LVQGLW PKSSL+ GT  + G + 
Sbjct: 354  LLCEGLAPVHRFSVLKHFAPDCTTKEILDALQNHALLVQGLWAPKSSLLLGTSKETGAQR 413

Query: 359  LARDYVLLLFSKKAIIKKSQLPTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVK 180
            +ARDYVLLLF K  +   S L    +L  A+   LN+L VER + KDWK +   D SF+K
Sbjct: 414  IARDYVLLLFWKNPVFSFSSLHFPSSLKTAVNKFLNILGVERPSVKDWKFKGQTDISFIK 473

Query: 179  SNPSVVKKQEEEWERLENRIKDHVCGGRNRPGMRSNT 69
            + P VVKKQEE W  LE  I +    G++  G ++ +
Sbjct: 474  NYPDVVKKQEEVWGDLERDIMNMFGDGKSGRGPKNTS 510


>gb|ABU45189.1| unknown [Capsicum frutescens]
          Length = 629

 Score =  366 bits (940), Expect = 1e-98
 Identities = 196/399 (49%), Positives = 260/399 (65%), Gaps = 11/399 (2%)
 Frame = -1

Query: 1238 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1059
            IDV++TP  DP ++LY  QYPLR +WRPYEL+E C+EVR++ ++ E+E+DLA+D DS N+
Sbjct: 115  IDVWYTPSFDPVSKLYAFQYPLRAVWRPYELEERCQEVRLRASTEEMEVDLAIDFDSNNF 174

Query: 1058 DSGADPRVQMKKQILTALWKP--PHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESR 885
            D  +     MKKQ L+  W P     SG+AVG+L G+KL+LNP+H VVQLRP+ QHL+  
Sbjct: 175  DRDSVHAATMKKQTLSTSWMPLPTCTSGYAVGILIGDKLHLNPVHAVVQLRPARQHLKES 234

Query: 884  ESKRKTVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLT 705
            E K+    +SN   +V++E+ +E           K P   KD  +DW+ LKYH   SD++
Sbjct: 235  ELKKNNT-TSNDEKSVENEDVKEKKPVAPSKMQNKPPGNYKDVGKDWLHLKYHGARSDIS 293

Query: 704  ARYLQKMKAQEGSQISFSMSSD---------DYLNSLCPGAYSGSFSSKGPSIRFLLTLP 552
            AR LQKM  +EGSQ+ FSMS           DYLN+LCPG  + +   K    R L  LP
Sbjct: 294  ARCLQKMAMEEGSQVPFSMSPSFSANLIHRVDYLNALCPGRPADTDKYKNLRTR-LSQLP 352

Query: 551  LRERFRTWLLEGPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGTDQ 372
            L +R +TWLLEGPP+HRF+ALKHLAPD +V+E+L VLQ  A+LVQGLWVPKSSLVYG + 
Sbjct: 353  LEDRVKTWLLEGPPIHRFDALKHLAPDTTVDEILRVLQLSAQLVQGLWVPKSSLVYGKNS 412

Query: 371  GIEVLARDYVLLLFSKKAIIKKSQLPTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDF 192
            GI+VLARD+VL  F+K  +IKKS    RP    A    L  LA+ER    DWKL+E PD 
Sbjct: 413  GIDVLARDFVLYQFTKSTLIKKSAFGRRPEFIKAATQSLKSLAIERPDLNDWKLKEHPDK 472

Query: 191  SFVKSNPSVVKKQEEEWERLENRIKDHVCGGRNRPGMRS 75
             F      VV++Q+  WER+  +I D + G  N+P M++
Sbjct: 473  KFENLYGDVVREQQATWERVGKQINDILPG--NKPIMKN 509


>ref|XP_006363147.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
            tuberosum]
          Length = 486

 Score =  358 bits (920), Expect = 2e-96
 Identities = 191/388 (49%), Positives = 253/388 (65%), Gaps = 1/388 (0%)
 Frame = -1

Query: 1238 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1059
            +DV+ TP  +     YVLQYPLR  WRPY LDE C++VR++P++AE+E+DLA+D DSKN+
Sbjct: 102  VDVWLTPSAN---EFYVLQYPLRSEWRPYGLDEKCQDVRLRPSTAEMEVDLAIDFDSKNF 158

Query: 1058 DSGADPRVQMKKQILTALWKP-PHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRE 882
            D  +     +KKQI++  W P    + FAVG+L G+KL+LNP+H VVQLRPS+QH   +E
Sbjct: 159  DRDSVHAATIKKQIVSTKWVPLSTCADFAVGILIGDKLHLNPVHAVVQLRPSLQH--RKE 216

Query: 881  SKRKTVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTA 702
            S+ K + +SN   +  +E+ +E           K P   KD  E W+ LKYH T SD++A
Sbjct: 217  SELKNLTTSNDEKSCANEDVKEKKPVGPSKKQNKPPGNYKDIGEHWLHLKYHGTRSDISA 276

Query: 701  RYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTWLL 522
            R+LQKM  + GS + FSM   DYLN++CP   +     +    R L   P  ER RTWLL
Sbjct: 277  RHLQKMAIEGGSPVPFSMIPGDYLNAICPARPTDIDRLRNLRTR-LSQKPFEERVRTWLL 335

Query: 521  EGPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGTDQGIEVLARDYV 342
            +GPP+HRF+ALKHLAPD  V+E+L VL+  A+LVQGLWVPKSSLVY T+ G+EVLAR++V
Sbjct: 336  QGPPIHRFDALKHLAPDNPVDEILEVLKSCAQLVQGLWVPKSSLVYDTNNGVEVLARNFV 395

Query: 341  LLLFSKKAIIKKSQLPTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKSNPSVV 162
            L  F+K  +IKKS    RP    A   VL  LAVER    DWKL+ELPD  F      VV
Sbjct: 396  LYEFTKDTLIKKSVFGRRPEFLKAATPVLKSLAVERPDLDDWKLKELPDKKFENLYGDVV 455

Query: 161  KKQEEEWERLENRIKDHVCGGRNRPGMR 78
            ++Q+  WE +  +I D + GGRNRP M+
Sbjct: 456  REQQAIWESMGKQINDIMHGGRNRPTMK 483


>ref|XP_004232385.1| PREDICTED: uncharacterized protein LOC101252245 [Solanum
            lycopersicum]
          Length = 659

 Score =  357 bits (916), Expect = 6e-96
 Identities = 196/423 (46%), Positives = 264/423 (62%), Gaps = 11/423 (2%)
 Frame = -1

Query: 1238 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1059
            +DV+ TP  +     YVLQYPLR  WRPY LDE C++VR++P+SAE+E+DLA+D DSKN+
Sbjct: 102  VDVWLTPSAN---EFYVLQYPLRSEWRPYGLDERCQDVRLRPSSAEMEVDLAIDFDSKNF 158

Query: 1058 DSGADPRVQMKKQILTALWKPPHI-SGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRE 882
            D  +     +KKQI++  W P    + FAVG+  G+K +LNP+H +VQLRPS+QH   +E
Sbjct: 159  DRDSVHAATIKKQIVSTKWVPSSTCADFAVGIFIGDKFHLNPVHAIVQLRPSLQH--RKE 216

Query: 881  SKRKTVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTA 702
            S+ K + +SN   + ++E+ +E           K+P   KD  E W+ LKYH T SD++A
Sbjct: 217  SELKNLTTSNDEKSCENEDVKEKKPVGLSKKQNKLPGNYKDIGEHWLHLKYHGTRSDISA 276

Query: 701  RYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTWLL 522
            R+LQKM  + GS + FSM   DYLN++CP   +     +    R L   P  ER RTWLL
Sbjct: 277  RHLQKMAMEGGSPVPFSMIPSDYLNAICPARPTDIDRLRNLRTR-LSQKPFEERVRTWLL 335

Query: 521  EGPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGTDQGIEVLARDYV 342
            EGPP+HRF+ LKHLAPD  V+E+L VL+  A+LVQGLWV KSSLVY T+ G+EVLAR++V
Sbjct: 336  EGPPIHRFDTLKHLAPDNPVDEILEVLKSCAQLVQGLWVAKSSLVYDTNNGVEVLARNFV 395

Query: 341  LLLFSKKAIIKKSQLPTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKSNPSVV 162
            L  F+K  +IKKS    RP    A   VL  LAVER    DWKL+ELPD  F      VV
Sbjct: 396  LYEFTKSTLIKKSVFGRRPEFLKAATPVLKSLAVERPDLDDWKLKELPDKKFENLYGDVV 455

Query: 161  KKQEEEWERLENRIKDHVCGGRNRPGMR---SNTTNNPAT*KSSS-------NLAMAEEV 12
            ++QE  WE +  +I D + GGRNRP ++   +   N PA   S           +++EE+
Sbjct: 456  REQEAIWESMGKQINDIMHGGRNRPTLKNPLNPKANIPALSSSDKPTPTTFLRTSLSEEI 515

Query: 11   REA 3
            R A
Sbjct: 516  RGA 518


>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit RPC5-like [Cucumis sativus]
          Length = 702

 Score =  355 bits (912), Expect = 2e-95
 Identities = 198/434 (45%), Positives = 264/434 (60%), Gaps = 22/434 (5%)
 Frame = -1

Query: 1238 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1059
            IDV FTP VD  ++LYVLQYPLRP WRPYE +  C+EVRVKP++ EVE+DL VD++S NY
Sbjct: 124  IDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIESNNY 183

Query: 1058 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 879
            D+ AD   QMKKQ LT+ W+PP  + +AVG+L GNKL+LNP+H VVQLRPS +HL S   
Sbjct: 184  DNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNSGGP 243

Query: 878  KRKTVGSSNVNDTVKSEEPQE-----XXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGS 714
            KRK   +   +  VKSEE  +                    +T+D EE W+PLKY+   S
Sbjct: 244  KRK--NNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRD-EECWIPLKYYGLES 300

Query: 713  DLTARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFR 534
            DL+ R+LQ M +Q  S + FSMS  DY++SLCPG  +     KGPS ++LL+L L ER +
Sbjct: 301  DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIK 360

Query: 533  TWLLEGPPLHRFNALKHLAPDESVEEVLGVLQDHARLVQGLWVPKSSLVYGTDQGIEVLA 354
              L EGPP+ RF+ALKH APD   EE +  LQ +A+LVQGLWVPKS  +   D G    A
Sbjct: 361  KLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQD-GSGRCA 419

Query: 353  RDYVLLLFSKKAIIKKSQLPTRPTLANAMIDVLNVLAVEREAFKDWKLRELPDFSFVKSN 174
            RD+VL LFSK  ++  SQ+    +L + +   LN+  VER AFKDWK +E  D  F+ ++
Sbjct: 420  RDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNH 479

Query: 173  PSVVKKQEEEWERLEN--------RIKDHVCGGRNRPG----MRSNTTNNPAT*KSSS-- 36
              + +KQEE W  +E         +   H      +PG    +    +++  T KSS+  
Sbjct: 480  VRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAP 539

Query: 35   ---NLAMAEEVREA 3
                 AM++E REA
Sbjct: 540  LNRKGAMSDETREA 553