BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00027000
         (1037 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [...    80   2e-18
gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japo...    65   5e-18
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta...    89   5e-18
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    78   7e-18
ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [S...    78   9e-18
gb|EEC71228.1| hypothetical protein OsI_03168 [Oryza sativa Indi...    64   1e-17
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    96   2e-17
ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis ...    95   4e-17
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    94   7e-17
gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japo...    69   7e-17
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    83   3e-16
ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616...    79   4e-16
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ...    62   1e-15
gb|ABF97084.1| retrotransposon protein, putative, unclassified [...    62   1e-15
ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein A...    70   1e-15
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi...    66   1e-15
gb|EMJ25879.1| hypothetical protein PRUPE_ppa025799mg [Prunus pe...    73   1e-15
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ...    65   2e-15
gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japo...    65   2e-15
gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japo...    62   2e-15

>gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
          Length = 1060

 Score = 79.7 bits (195), Expect(2) = 2e-18
 Identities = 53/169 (31%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
 Frame = -3

Query: 720  RCWTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLAHLFFQCNRA 541
            + W L+I  K+K FLWRC  + LP    L  R I  + ICP C  K E++ H  + C  A
Sbjct: 747  KIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAA 806

Query: 540  KTVWK------LAPVWWSNLSGDSFSIKRWWYDVCELDKSSVSQDRIQLSVYILWWLWKT 379
            K VW+      +  VW  N      S +  W+   +L  S   Q    L  Y+ W LW  
Sbjct: 807  KEVWRNSAWGNVCEVWRVN------SFRELWH-ALQLSSSGEEQG---LFAYLCWGLWNR 856

Query: 378  RNIWIFERIFWTEKEIVGRAVCEWLEFK------HATEAEKRNVQQPIQ 250
            RN +IFE    T  +++ R      EF       H     + + Q P+Q
Sbjct: 857  RNSFIFEGKSETAIQLLSRMTKLAQEFSDANNILHTIHGRQSSPQAPLQ 905



 Score = 40.4 bits (93), Expect(2) = 2e-18
 Identities = 22/55 (40%), Positives = 31/55 (56%)
 Frame = -1

Query: 977 VYELFNSERNGWDRDLVFHIFCLEDANHILQIPIVPNGGKDRLTWHLERRGNFTV 813
           V +LF S    W+  L+  IF  ++ + ILQIP+    G D L WH ER G ++V
Sbjct: 663 VCDLFTSSGQ-WNVPLLKDIFWDQEVDAILQIPLASLAGHDCLIWHYERNGMYSV 716


>gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japonica Group]
          Length = 1049

 Score = 65.1 bits (157), Expect(2) = 5e-18
 Identities = 42/116 (36%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
 Frame = -3

Query: 714  WTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLAHLFFQCNRAKT 535
            WT+   GK+   LWR +H+ LPT  QL+RR++P +E C  CG  ++ + H+F  C  A T
Sbjct: 775  WTINAPGKMLIHLWRSVHDCLPTGFQLRRRHVPATEGCIFCG-HDDRIEHVFLVCPFAAT 833

Query: 534  VW-KLAPVWWSNL-SGDSFSIKRWWYDVCELDKSSVSQDRIQLSVYILWWLWKTRN 373
            VW  +   +  NL   +  +I++W +D   L +SS  Q  + L+V  L  +W+ RN
Sbjct: 834  VWDAIKEKFQINLCRRELCNIRQWVFDF--LTRSSHIQKTV-LAV-TLRHIWEARN 885



 Score = 53.5 bits (127), Expect(2) = 5e-18
 Identities = 26/60 (43%), Positives = 38/60 (63%)
 Frame = -1

Query: 992 PDIF*VYELFNSERNGWDRDLVFHIFCLEDANHILQIPIVPNGGKDRLTWHLERRGNFTV 813
           PD   V  L N ERN WD ++V  +F  + A  +LQ+PI  +GG+D ++W  ++RG FTV
Sbjct: 678 PDDVTVDWLMNPERNAWDEEIVKAVFNDDIAREVLQVPISRHGGEDFVSWPHDKRGLFTV 737


>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 773

 Score = 89.0 bits (219), Expect(2) = 5e-18
 Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
 Frame = -3

Query: 714 WTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLAHLFFQCNRAKT 535
           W      K+KHF WR  HN+LPTA  LKRR +   + C  CG   E + HL FQC  +K 
Sbjct: 502 WKQNAPPKIKHFWWRSAHNALPTAGNLKRRRLITDDTCQRCGEASEDVNHLLFQCRVSKE 561

Query: 534 VWKLAPVWWSNLSGDSFSIKRWWYDVCELDKSSVSQDR-IQLSVYILWWLWKTRNIWIFE 358
           +W+ A +      GDS     +  ++  + K + S  + + L  +I W +WK RN  IF 
Sbjct: 562 IWEQAHI--KLCPGDSLMSNSFNQNLESIQKLNQSARKDVSLFPFIGWRIWKMRNDLIFN 619

Query: 357 RIFWTEKEIVGRAVCEWLEFKHATEAEKRNVQQP 256
              W+  + + +A+ +  ++K +    ++  ++P
Sbjct: 620 NKRWSIPDSIQKALIDQQQWKESLNCNEQQQRKP 653



 Score = 29.6 bits (65), Expect(2) = 5e-18
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -1

Query: 944 WDRDLVFHIFCLEDANHILQIPIVPNGGKDRLTWHLERRGNFTV 813
           W+ DL+  +    D  HI  I     G  D +TW     GN++V
Sbjct: 425 WNEDLLCKLIHQNDIPHIRAIRPSITGANDAITWIYTHDGNYSV 468


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 77.8 bits (190), Expect(2) = 7e-18
 Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
 Frame = -3

Query: 714  WTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLAHLFFQCNRAKT 535
            W ++   KL+HFLW+ L   +P ++ L++R I C + C  CG  EE++ H  FQC+ A+ 
Sbjct: 829  WKVQCPPKLRHFLWQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHTLFQCHPARQ 888

Query: 534  VWKLAPVWWSNLSGDSFSI-----KRWWYDVCELDKSSVSQDRIQLSVYILWWLWKTRNI 370
            +W L+ +  +     S SI       +W     +D +           +I+W++WK RN 
Sbjct: 889  IWALSQIPTAPGIFPSNSIFTNLDHLFWRIPSGVDSAPYP--------WIIWYIWKARNE 940

Query: 369  WIFERIFWTEKEIVGRAVCE---WLEFKHATEAEK 274
             +FE +     EI+  AV E   W E +    +E+
Sbjct: 941  KVFENVDKDPMEILLLAVKEAQSWQEAQVELHSER 975



 Score = 40.4 bits (93), Expect(2) = 7e-18
 Identities = 21/55 (38%), Positives = 29/55 (52%)
 Frame = -1

Query: 977 VYELFNSERNGWDRDLVFHIFCLEDANHILQIPIVPNGGKDRLTWHLERRGNFTV 813
           V  L +S  N W+ DL+  +F  ED   I  +PI     +D L WH  + GN+TV
Sbjct: 745 VKSLIDSRSNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHFTKAGNYTV 799


>ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [Sorghum bicolor]
           gi|241920472|gb|EER93616.1| hypothetical protein
           SORBIDRAFT_01g011130 [Sorghum bicolor]
          Length = 463

 Score = 77.8 bits (190), Expect(2) = 9e-18
 Identities = 45/118 (38%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
 Frame = -3

Query: 720 RCWTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLAHLFFQCNRA 541
           R W L    K+KHFLWR LHNS P  D L RR +     CPVC    E   HLFF+C  A
Sbjct: 144 RVWKLSCPNKIKHFLWRFLHNSHPLRDNLIRRGMEIVPRCPVCNQVGEDGGHLFFKCGMA 203

Query: 540 KTVWKLAPVWWSNLSGDSFSIKRWW--YDVCELDKSSVSQDRIQLSVYILWWLWKTRN 373
           + VW+L       LS +   +  ++   DV E    + S+ R  + +  LW+ W  RN
Sbjct: 204 RQVWELL-----GLSTEREVLANFYTPIDVVEFILRA-SESRKLMMIVALWYTWSERN 255



 Score = 40.0 bits (92), Expect(2) = 9e-18
 Identities = 22/55 (40%), Positives = 29/55 (52%)
 Frame = -1

Query: 977 VYELFNSERNGWDRDLVFHIFCLEDANHILQIPIVPNGGKDRLTWHLERRGNFTV 813
           V EL N     WD  LV  IF  EDA  IL +P+   G  + + WH ++ G F+V
Sbjct: 57  VAELINPVTRQWDELLVRDIFWEEDAEVILALPVY-QGRSNMVAWHYDKHGVFSV 110


>gb|EEC71228.1| hypothetical protein OsI_03168 [Oryza sativa Indica Group]
          Length = 995

 Score = 63.9 bits (154), Expect(2) = 1e-17
 Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
 Frame = -3

Query: 714  WTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLAHLFFQCNRAKT 535
            WT+   GK+   LWR +H+ LPT  QL+RR++P +E C  CG  ++ + H+F  C  A T
Sbjct: 721  WTINAPGKMLIHLWRSVHDCLPTGFQLRRRHVPATEGCIFCG-HDDRIEHVFLVCPFAAT 779

Query: 534  VW-KLAPVWWSNL-SGDSFSIKRWWYDVCELDKSSVSQDRIQLSVYILWWLWKTRN 373
            VW  +   +  NL   +  ++++W +D   L +SS  Q  + L+V  L  +W+ RN
Sbjct: 780  VWDAIKEKFQINLCRRELCNMRQWVFDF--LTRSSHIQKTV-LAV-TLRHIWEARN 831



 Score = 53.5 bits (127), Expect(2) = 1e-17
 Identities = 26/60 (43%), Positives = 38/60 (63%)
 Frame = -1

Query: 992 PDIF*VYELFNSERNGWDRDLVFHIFCLEDANHILQIPIVPNGGKDRLTWHLERRGNFTV 813
           PD   V  L N ERN WD ++V  +F  + A  +LQ+PI  +GG+D ++W  ++RG FTV
Sbjct: 624 PDDVTVDWLMNPERNAWDEEIVKAVFNDDIAREVLQVPISRHGGEDFVSWPHDKRGLFTV 683


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 20/257 (7%)
 Frame = -3

Query: 726  RNRCWTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLAHLFFQCN 547
            +   W L+I  K+KHF+WRCL  +L T  QL+ RNIP    C  C   +ET+ H+ F C+
Sbjct: 1385 KQEIWRLKITPKIKHFIWRCLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCS 1444

Query: 546  RAKTVWKLAPVWWSNLSGDSFSIKRWWYDVCELDKSSVSQDRIQ---------LSVYILW 394
             A+ VW+ A     N SG   S +  + D  E +   + Q +           +  +I+W
Sbjct: 1445 YAQVVWRSA-----NFSG---SNRLCFTDNLEENIRLILQGKKNQNLPILNGLMPFWIMW 1496

Query: 393  WLWKTRNIWIF---ERIFWTEKEIVGRAVCEWLEFKHATEAEKRNVQQPIQICTFSSKQS 223
             LWK+RN ++F   +R  W   +   +   EW+E      A   N  Q        SKQ 
Sbjct: 1497 RLWKSRNEYLFQQLDRFPWKVAQKAEQEATEWVETMVNDTAISHNTAQSNDRPLSRSKQW 1556

Query: 222  DFLNELEPTFHVVSGVVQSGCYFGIGGWIKDKDDKLIYAWSSSRNDLHH*VEVHLAGIRQ 43
                E     +  SG VQ   Y   G  ++D + +++++  +     +  ++    G   
Sbjct: 1557 SSPPEGFLKCNFDSGYVQGRDYTSTGWILRDCNGRVLHSGCAKLQQSYSALQAEALGFLH 1616

Query: 42   AM--------CFAFFKG 16
            A+        C+ +F+G
Sbjct: 1617 ALQMVWIRGYCYVWFEG 1633


>ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|3184275|gb|AAC18922.1| putative reverse transcriptase
           [Arabidopsis thaliana] gi|330250513|gb|AEC05607.1| RNase
           H domain-containing protein [Arabidopsis thaliana]
          Length = 365

 Score = 95.1 bits (235), Expect = 4e-17
 Identities = 64/213 (30%), Positives = 101/213 (47%), Gaps = 6/213 (2%)
 Frame = -3

Query: 732 ESRNRCWTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLAHLFFQ 553
           E +   W L +  K+KHFLWRC+  +L T  +L+ RNI    IC  C  +EET+ H+ F 
Sbjct: 32  EVKQAIWKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFN 91

Query: 552 CNRAKTVWKLAPVWWSNLSGDSFSIKRWWYDVCELDKSSV--SQDRIQLSVYILWWLWKT 379
           C   ++VW+ A +   N  G   S +     + +L K+    S DR  L  +I+W LWK+
Sbjct: 92  CPYTQSVWRSANIIIGNQWGPPSSFEDNLNRLIQLSKTQTTNSLDRF-LPFWIMWRLWKS 150

Query: 378 RNIWIFERIFWTEKEIVGRAV---CEWLEFKHATEAEKRNV-QQPIQICTFSSKQSDFLN 211
           RN+++F++   +      + +    EWL     TE    +V   PIQ     S Q +   
Sbjct: 151 RNVFLFQQKCQSPDYEARKGIQDATEWLNANETTENTNVHVATNPIQTSRRDSSQWNPPP 210

Query: 210 ELEPTFHVVSGVVQSGCYFGIGGWIKDKDDKLI 112
           E     +  SG  Q   Y   G  I++ +  ++
Sbjct: 211 EGWVKCNFDSGYTQGSPYTRSGWTIRECNGHIV 243


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 94.4 bits (233), Expect = 7e-17
 Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 1/212 (0%)
 Frame = -3

Query: 714  WTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLAHLFFQCNRAKT 535
            W ++   K KHF W+CL   L T  +L  R+I   ++CP CG +EE++ HL F C  ++ 
Sbjct: 927  WKIKTTRKFKHFEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQ 986

Query: 534  VWKLAPVWWSNLSGDSFSI-KRWWYDVCELDKSSVSQDRIQLSVYILWWLWKTRNIWIFE 358
            +W L+P+  S       S+   + + +    +  +++D +++  +ILW++WK+RN +IFE
Sbjct: 987  IWALSPIPSSEYIFPRNSLFYNFDFLLSRGKEFDIAEDIMEIFPWILWYIWKSRNRFIFE 1046

Query: 357  RIFWTEKEIVGRAVCEWLEFKHATEAEKRNVQQPIQICTFSSKQSDFLNELEPTFHVVSG 178
             +  + + I+  A+ E   +K A   E      P Q+   +   +  + + + ++H+   
Sbjct: 1047 NVIESPQVILDFAIQEANVWKQANSKEVATEYPPPQVVPANLPPTRNVCQFDASWHL--- 1103

Query: 177  VVQSGCYFGIGGWIKDKDDKLIYAWSSSRNDL 82
                    G G  + D+D  L+    S+R  L
Sbjct: 1104 ---KDTLSGHGWVLVDQDIVLLLGLKSARKSL 1132


>gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japonica Group]
          Length = 613

 Score = 68.6 bits (166), Expect(2) = 7e-17
 Identities = 37/116 (31%), Positives = 55/116 (47%)
 Frame = -3

Query: 720 RCWTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLAHLFFQCNRA 541
           + W L    K+KHFLWR  HNSLP    + +R +     CPVC   +E   H FF+C   
Sbjct: 293 KLWRLNHLPKVKHFLWRLAHNSLPLRQNISKRGMEIDTRCPVCLRLDENGGHCFFKCKFV 352

Query: 540 KTVWKLAPVWWSNLSGDSFSIKRWWYDVCELDKSSVSQDRIQLSVYILWWLWKTRN 373
           K  W++             S++    DVC+    ++ +D +  +V +LW  W  RN
Sbjct: 353 KPCWRMLNF---EHIRQELSLQTSTLDVCK-HILNLREDIMLTTVILLWNWWDARN 404



 Score = 46.2 bits (108), Expect(2) = 7e-17
 Identities = 25/55 (45%), Positives = 31/55 (56%)
 Frame = -1

Query: 977 VYELFNSERNGWDRDLVFHIFCLEDANHILQIPIVPNGGKDRLTWHLERRGNFTV 813
           V +L N     WDR+L+  IF  ED  +IL IP V NG  D   WH + RG F+V
Sbjct: 204 VADLINPITGEWDRELIQDIFWEEDVKNILAIP-VHNGYSDVAAWHFDPRGIFSV 257


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 82.8 bits (203), Expect(2) = 3e-16
 Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
 Frame = -3

Query: 720  RCWTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLAHLFFQCNRA 541
            + W  +I  K+K F W+ +HN L     +++R +     CP CG KEET  HL + C+ +
Sbjct: 1053 KIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDES 1112

Query: 540  KTVWKLAP--VWWSNLSGDSFSIKRWWYDVCELDKSSVSQDRIQLSVYILWWLWKTRNIW 367
               W ++P  +   N+   SF I  W   + +  K +   +   L   I W +W  RN W
Sbjct: 1113 SRAWYISPLRIHTGNIEAGSFRI--WVESLLDTHKDT---EWWALFWMICWNIWLGRNKW 1167

Query: 366  IFERIFWTEKEIVGRAVCEWLEFK----HATEAEKRNVQQ 259
            +FE+     +E+V RAV   +EF+    H +  E  N  +
Sbjct: 1168 VFEKKKLAFQEVVERAVRGVMEFEEECAHTSPVETLNTHE 1207



 Score = 29.6 bits (65), Expect(2) = 3e-16
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = -1

Query: 977  VYELFNSERNGWDRDLVFHIFCLEDANHILQIPIVPNGGKDRLTWHLERRGNFTV 813
            V EL +++R  W+ +L+  +F   ++  I +IP+      D+  W + + G FTV
Sbjct: 972  VCELISNDR--WNVELLNTLFQPWESTAIQRIPVALQKKPDQWMWMMSKNGQFTV 1024


>ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616098 [Citrus sinensis]
          Length = 510

 Score = 79.0 bits (193), Expect(2) = 4e-16
 Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
 Frame = -3

Query: 720 RCWTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLAHLFFQCNRA 541
           + W L++  K+KHF+W  + N LPTAD L+R  +    +CP+C   +E +AH    C+ A
Sbjct: 198 KVWKLKVPAKVKHFIWCAVVNVLPTADNLRRCQVEVPSVCPICNAYDEIVAHCLVNCSFA 257

Query: 540 KTVWKLAPVWWSNLSGDSFSIKRWWYDVCELDKSSVSQDRIQLSVYILWWLWKTRN--IW 367
           K+ W L+P+ +    G   +   W   +     S  S D   L+    W LW+ +N  +W
Sbjct: 258 KSCWLLSPIGY---VGGCENFMDWLEGIF----SRYSSDDCDLAAMTCWSLWENKNAKVW 310



 Score = 33.5 bits (75), Expect(2) = 4e-16
 Identities = 19/55 (34%), Positives = 23/55 (41%)
 Frame = -1

Query: 977 VYELFNSERNGWDRDLVFHIFCLEDANHILQIPIVPNGGKDRLTWHLERRGNFTV 813
           V  L    +  WD D++  IF   D   I QIP+      D   W    RG FTV
Sbjct: 123 VNNLMTPGQRNWDLDMLVDIFNDRDQALITQIPLSSRRDDDAWYWSANSRGLFTV 177


>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1185

 Score = 62.0 bits (149), Expect(2) = 1e-15
 Identities = 27/68 (39%), Positives = 35/68 (51%)
 Frame = -3

Query: 714  WTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLAHLFFQCNRAKT 535
            W L I  K+K F WR LH  +P    L  ++I     CPVC    E + H+ F C RAK 
Sbjct: 864  WKLEIPPKIKIFAWRMLHGVIPCKGILADKHIAVQGGCPVCSSGVEDIKHMVFTCRRAKL 923

Query: 534  VWKLAPVW 511
            +WK   +W
Sbjct: 924  IWKQLGIW 931



 Score = 48.9 bits (115), Expect(2) = 1e-15
 Identities = 27/55 (49%), Positives = 32/55 (58%)
 Frame = -1

Query: 977 VYELFNSERNGWDRDLVFHIFCLEDANHILQIPIVPNGGKDRLTWHLERRGNFTV 813
           V EL N    GWD DL+  +F   DAN ILQIPI   G +D + WH  R G F+V
Sbjct: 777 VEELINPVSGGWDEDLIDTLFWPIDANRILQIPI-SAGREDFVAWHHTRSGIFSV 830


>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1184

 Score = 62.0 bits (149), Expect(2) = 1e-15
 Identities = 27/68 (39%), Positives = 35/68 (51%)
 Frame = -3

Query: 714  WTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLAHLFFQCNRAKT 535
            W L I  K+K F WR LH  +P    L  ++I     CPVC    E + H+ F C RAK 
Sbjct: 864  WKLEIPPKIKIFAWRMLHGVIPCKGILADKHIAVQGGCPVCSSGVEDIKHMVFTCRRAKL 923

Query: 534  VWKLAPVW 511
            +WK   +W
Sbjct: 924  IWKQLGIW 931



 Score = 48.9 bits (115), Expect(2) = 1e-15
 Identities = 27/55 (49%), Positives = 32/55 (58%)
 Frame = -1

Query: 977 VYELFNSERNGWDRDLVFHIFCLEDANHILQIPIVPNGGKDRLTWHLERRGNFTV 813
           V EL N    GWD DL+  +F   DAN ILQIPI   G +D + WH  R G F+V
Sbjct: 777 VEELINPVSGGWDEDLIDTLFWPIDANRILQIPI-SAGREDFVAWHHTRSGIFSV 830


>ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 494

 Score = 70.5 bits (171), Expect(2) = 1e-15
 Identities = 39/119 (32%), Positives = 58/119 (48%)
 Frame = -3

Query: 714 WTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLAHLFFQCNRAKT 535
           W L +  K+K F+WR   N LPTA+ L +R I     C  CG + E   H    C  AK 
Sbjct: 212 WKLTLPAKIKIFIWRAAKNLLPTAENLWKRKIVHEAYCKRCGNRVENTLHALITCKAAKK 271

Query: 534 VWKLAPVWWSNLSGDSFSIKRWWYDVCELDKSSVSQDRIQLSVYILWWLWKTRNIWIFE 358
           VW+L+P+        SF        + +L    +S+  +++ + ILW +W  RN  +FE
Sbjct: 272 VWQLSPM------ASSFQEMGNPDILGDLGGKKLSRADMEMLMTILWVIWYDRNKLVFE 324



 Score = 40.4 bits (93), Expect(2) = 1e-15
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = -1

Query: 968 LFNSERNGWDRDLVFHIFCLEDANHILQIPIVPNGGKDRLTWHLERRGNFTV 813
           ++    N W  DL+   F  EDA     IP+     +D + WH ++RG +T+
Sbjct: 130 VYRDNENNWKTDLIQQNFVKEDAKADQSIPLPRRQSEDEVIWHYDKRGKYTM 181


>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score = 65.9 bits (159), Expect(2) = 1e-15
 Identities = 38/125 (30%), Positives = 63/125 (50%)
 Frame = -3

Query: 747  GVKKIESRNRCWTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLA 568
            G +KI SR   W  +++ K+K F+W+   + LPT +  +RR I  +  CPVCG K E   
Sbjct: 927  GERKIWSR--VWNAKVQAKVKIFIWKLAQDKLPTWENKRRRKIEMNGTCPVCGTKGENSY 984

Query: 567  HLFFQCNRAKTVWKLAPVWWSNLSGDSFSIKRWWYDVCELDKSSVSQDRIQLSVYILWWL 388
            H   +C +A+ + +     W     D+F      + +  LD   V++++    +Y+LW  
Sbjct: 985  HATVECTKARALREALRAVWHLPGEDNFLWTGPDWLLILLD--GVNEEQRTHIMYMLWRA 1042

Query: 387  WKTRN 373
            W  RN
Sbjct: 1043 WYLRN 1047



 Score = 44.7 bits (104), Expect(2) = 1e-15
 Identities = 23/55 (41%), Positives = 30/55 (54%)
 Frame = -1

Query: 977  VYELFNSERNGWDRDLVFHIFCLEDANHILQIPIVPNGGKDRLTWHLERRGNFTV 813
            V EL N E   W+  LV H+   EDAN +L+I +  +   D   WH E+ G FTV
Sbjct: 847  VNELINEENRCWNETLVRHVLKEEDANEVLKIRLPNHQMDDFPAWHHEKSGLFTV 901


>gb|EMJ25879.1| hypothetical protein PRUPE_ppa025799mg [Prunus persica]
          Length = 867

 Score = 73.2 bits (178), Expect(2) = 1e-15
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
 Frame = -3

Query: 720  RCWTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLAHLFFQCNRA 541
            + W L++  K+K FLWRC+   LP+   L  R I  S ICP CG K E++ H  + CN +
Sbjct: 698  KLWRLQVLNKIKFFLWRCIWGFLPSRQNLYHRKILNSPICPRCGKKVESINHAIWACNES 757

Query: 540  --KTVWKLAPVWWSNLSGDSFSIKRWWYDVCELDKSSVSQDRIQLSVYILWWLWKTRNIW 367
              +  W++             S K  W  V  +     S++ + L  ++ W +W  RN  
Sbjct: 758  ANRHEWRIT------------SFKELWQSVIVVS----SKEEVDLFAFLCWDIWNDRNNL 801

Query: 366  IFERIFWTEKEIVGRAVCEWLEF 298
            +F+        +  +A+   +EF
Sbjct: 802  LFQGRGLESVSVFNKALAYQIEF 824



 Score = 37.4 bits (85), Expect(2) = 1e-15
 Identities = 20/55 (36%), Positives = 32/55 (58%)
 Frame = -1

Query: 977 VYELFNSERNGWDRDLVFHIFCLEDANHILQIPIVPNGGKDRLTWHLERRGNFTV 813
           V ELFN+    WD++L+   F  ++   ILQIP+     +D+L  H +R G ++V
Sbjct: 614 VCELFNAAGQ-WDKELLKANFWEQEVKAILQIPLASIHREDKLICHYDRSGKYSV 667


>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score = 65.5 bits (158), Expect(2) = 2e-15
 Identities = 38/125 (30%), Positives = 62/125 (49%)
 Frame = -3

Query: 747  GVKKIESRNRCWTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLA 568
            G +KI SR   W  +++ K+K F+W+   + LPT +  +RR I  +  CPVCG K E   
Sbjct: 952  GERKIWSR--VWNAKVQAKVKIFIWKLAQDKLPTWENKRRRKIEMNGTCPVCGTKGENSY 1009

Query: 567  HLFFQCNRAKTVWKLAPVWWSNLSGDSFSIKRWWYDVCELDKSSVSQDRIQLSVYILWWL 388
            H   +C +A+ + +     W     D F      + +  LD   V++++    +Y+LW  
Sbjct: 1010 HATVECTKARALREALRAVWHLPGEDKFLWTGPDWLLILLD--GVNEEQRTHIMYMLWRA 1067

Query: 387  WKTRN 373
            W  RN
Sbjct: 1068 WYLRN 1072



 Score = 44.7 bits (104), Expect(2) = 2e-15
 Identities = 23/55 (41%), Positives = 30/55 (54%)
 Frame = -1

Query: 977  VYELFNSERNGWDRDLVFHIFCLEDANHILQIPIVPNGGKDRLTWHLERRGNFTV 813
            V EL N E   W+  LV H+   EDAN +L+I +  +   D   WH E+ G FTV
Sbjct: 872  VNELINEENRCWNETLVRHVLKEEDANEVLKIRLPNHQMDDFPAWHHEKSGLFTV 926


>gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japonica Group]
          Length = 1076

 Score = 65.5 bits (158), Expect(2) = 2e-15
 Identities = 38/125 (30%), Positives = 62/125 (49%)
 Frame = -3

Query: 747  GVKKIESRNRCWTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLA 568
            G +KI SR   W  +++ K+K F+W+   + LPT +  +RR I  +  CPVCG K E   
Sbjct: 733  GERKIWSR--VWNAKVQAKVKIFIWKLAQDKLPTWENKRRRKIEMNGTCPVCGTKGENSY 790

Query: 567  HLFFQCNRAKTVWKLAPVWWSNLSGDSFSIKRWWYDVCELDKSSVSQDRIQLSVYILWWL 388
            H   +C +A+ + +     W     D F      + +  LD   V++++    +Y+LW  
Sbjct: 791  HATVECTKARALREALRAVWHLPGEDKFLWTGPDWLLILLD--GVNEEQRTHIMYMLWRA 848

Query: 387  WKTRN 373
            W  RN
Sbjct: 849  WYLRN 853



 Score = 44.7 bits (104), Expect(2) = 2e-15
 Identities = 23/55 (41%), Positives = 30/55 (54%)
 Frame = -1

Query: 977 VYELFNSERNGWDRDLVFHIFCLEDANHILQIPIVPNGGKDRLTWHLERRGNFTV 813
           V EL N E   W+  LV H+   EDAN +L+I +  +   D   WH E+ G FTV
Sbjct: 653 VNELINEENRCWNETLVRHVLKEEDANEVLKIRLPNHQMDDFPAWHHEKSGLFTV 707


>gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japonica Group]
          Length = 940

 Score = 62.4 bits (150), Expect(2) = 2e-15
 Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 10/254 (3%)
 Frame = -3

Query: 732  ESRNR---CWTLRIKGKLKHFLWRCLHNSLPTADQLKRRNIPCSEICPVCGFKEETLAHL 562
            ES NR    W +   GK+   LWR +H+ LP+  QL+RR+IP ++ C  C  +++ + H+
Sbjct: 616  ESANRWKELWRINAPGKMLTNLWRIVHDCLPSGFQLRRRHIPATDGCCFCE-RDDRIEHI 674

Query: 561  FFQCNRAKTVWKLAPVWW--SNLSGDSFSIKRWWYDVCELDKSSVSQDRIQLSVYILWWL 388
            F  C  A  +W      +       D  ++K+W +D   L +SS  Q +  L+V  LW +
Sbjct: 675  FLLCPFAVCIWDSIKQHFDLKLCMTDLSNMKQWVFDF--LGRSSNIQ-KTALAV-TLWHI 730

Query: 387  WKTRNIWIFERIFWTEKEIVGR--AVCEWLEFKH---ATEAEKRNVQQPIQICTFSSKQS 223
            W+ RN           ++++ +  A  E +E +H   A +A + +  +P+       + +
Sbjct: 731  WEARNHSRNNPTLANPRQVIQKILAYVEMIE-QHCCCAVQAVRGDALRPVPRWRPPPEGT 789

Query: 222  DFLNELEPTFHVVSGVVQSGCYFGIGGWIKDKDDKLIYAWSSSRNDLHH*VEVHLAGIRQ 43
              +N         + V QS   FG+G   +D     ++A +   +            IR 
Sbjct: 790  ILIN-------TDAAVFQSVNSFGLGFLFRDHSGLCLFAANERHSGCIQPEMAEALAIRC 842

Query: 42   AMCFAFFKGIKKVI 1
            A+  A  +G +K++
Sbjct: 843  ALRTAMEEGHQKIV 856



 Score = 47.8 bits (112), Expect(2) = 2e-15
 Identities = 25/60 (41%), Positives = 34/60 (56%)
 Frame = -1

Query: 992 PDIF*VYELFNSERNGWDRDLVFHIFCLEDANHILQIPIVPNGGKDRLTWHLERRGNFTV 813
           PD   V  L N+    WD D VF  F    A  ILQIP+  +GG+D ++W  ++RG F+V
Sbjct: 528 PDDVTVDFLVNAAIGEWDEDKVFSFFDETTAQQILQIPVSAHGGEDFISWPHDKRGVFSV 587