BLASTX nr result
ID: Rehmannia22_contig00026993
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00026993
(677 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo... 137 2e-30
gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus pe... 136 5e-30
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe... 136 5e-30
gb|EMJ08780.1| hypothetical protein PRUPE_ppa018489mg, partial [... 133 4e-29
gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea] 129 6e-28
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta... 129 8e-28
gb|EMJ04900.1| hypothetical protein PRUPE_ppa020995mg, partial [... 129 1e-27
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] 128 1e-27
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana] 128 1e-27
gb|AAX95129.1| retrotransposon protein, putative, unclassified [... 127 3e-27
gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japo... 127 3e-27
gb|ABA91837.2| retrotransposon protein, putative, unclassified [... 127 3e-27
gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus pe... 127 4e-27
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 127 4e-27
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 126 5e-27
ref|XP_004295858.1| PREDICTED: uncharacterized protein LOC101314... 125 9e-27
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 125 9e-27
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 124 2e-26
gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japo... 124 3e-26
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi... 124 3e-26
>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
Length = 1494
Score = 137 bits (346), Expect = 2e-30
Identities = 71/222 (31%), Positives = 117/222 (52%)
Frame = +3
Query: 12 WCKGKRTNSAKVIQNCKDKLSEVRKNGCSENWDEWGKLRIVLDRAYKEEEGYWSQKARIN 191
W + K N K I+ C+ +L E+R G ++ + +L+I L EE +W Q++RI
Sbjct: 536 WSRDKIGNIKKSIERCRRELEEMRMRGREDSEPDVHRLKIFLQELLHREEIWWKQRSRIT 595
Query: 192 WLK*GDKNSKFFHACTIQRRKGNCIENLIRNNGMVCSSHVEIEKEVESFYHSLFESSNLD 371
WLK GD+N+++FH R + N I+ L R++GM+CS E+ + SF+ L+
Sbjct: 596 WLKEGDRNTRYFHLKASWRARKNLIKKLRRSDGMMCSKEEELGEIARSFFRDLYTKDESL 655
Query: 372 IDLSILDGIPQSISASMNQILTRYVEGDEIRKALFDLSPNKDLGLDGMSPLFFQYSWHII 551
+L+ I+ MN +LT+ +EI ALF + P K G DG FFQ +W ++
Sbjct: 656 NPGELLNMFEPKITDEMNGMLTKPFTDEEISDALFQIGPLKAPGPDGFPARFFQRNWGVL 715
Query: 552 ANKLFLAVKDFFRCGKMLRSVDHTIVTLIPKIKNPSSIAHFR 677
+ V++FF G+ ++ T++ +IPK P + FR
Sbjct: 716 KRDVIEGVREFFETGEWKEGMNDTVIVMIPKTNAPVEMKDFR 757
>gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
Length = 1275
Score = 136 bits (343), Expect = 5e-30
Identities = 70/181 (38%), Positives = 103/181 (56%)
Frame = +3
Query: 135 LDRAYKEEEGYWSQKARINWLK*GDKNSKFFHACTIQRRKGNCIENLIRNNGMVCSSHVE 314
LD + E YW Q++R NWLK GDKN+ +FH RR+ N I+ L +NG +S
Sbjct: 289 LDELLAKNELYWCQRSRENWLKAGDKNTSYFHQKATNRRRRNIIKGLEDSNGCWRTSRQG 348
Query: 315 IEKEVESFYHSLFESSNLDIDLSILDGIPQSISASMNQILTRYVEGDEIRKALFDLSPNK 494
I V ++ LF SS + IL + ++A M Q+L EI+ A+F + P+K
Sbjct: 349 ITSIVIDYFGDLFRSSGSSMMEEILSALEPKVTADMQQVLIADFSYQEIKDAVFQMQPSK 408
Query: 495 DLGLDGMSPLFFQYSWHIIANKLFLAVKDFFRCGKMLRSVDHTIVTLIPKIKNPSSIAHF 674
G DG+ PLF+Q W I+ + + AV+ F + +MLR ++HT VTLIPK+K P ++A
Sbjct: 409 APGPDGLPPLFYQKYWRIVGDDVVAAVRAFLQSNEMLRQLNHTFVTLIPKVKEPRTMAQL 468
Query: 675 R 677
R
Sbjct: 469 R 469
>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
Length = 1755
Score = 136 bits (343), Expect = 5e-30
Identities = 70/181 (38%), Positives = 103/181 (56%)
Frame = +3
Query: 135 LDRAYKEEEGYWSQKARINWLK*GDKNSKFFHACTIQRRKGNCIENLIRNNGMVCSSHVE 314
LD + E YW Q++R NWLK GDKN+ +FH RR+ N I+ L +NG +S
Sbjct: 743 LDELLAKNELYWCQRSRENWLKAGDKNTSYFHQKATNRRRRNIIKGLEDSNGCWRTSRQG 802
Query: 315 IEKEVESFYHSLFESSNLDIDLSILDGIPQSISASMNQILTRYVEGDEIRKALFDLSPNK 494
I V ++ LF SS + IL + ++A M Q+L EI+ A+F + P+K
Sbjct: 803 ITSIVIDYFGDLFRSSGSSMMEEILSALEPKVTADMQQVLIADFSYQEIKDAVFQMQPSK 862
Query: 495 DLGLDGMSPLFFQYSWHIIANKLFLAVKDFFRCGKMLRSVDHTIVTLIPKIKNPSSIAHF 674
G DG+ PLF+Q W I+ + + AV+ F + +MLR ++HT VTLIPK+K P ++A
Sbjct: 863 APGPDGLPPLFYQKYWRIVGDDVVAAVRAFLQSNEMLRQLNHTFVTLIPKVKEPRTMAQL 922
Query: 675 R 677
R
Sbjct: 923 R 923
>gb|EMJ08780.1| hypothetical protein PRUPE_ppa018489mg, partial [Prunus persica]
Length = 1146
Score = 133 bits (335), Expect = 4e-29
Identities = 81/227 (35%), Positives = 117/227 (51%), Gaps = 5/227 (2%)
Frame = +3
Query: 12 WCKGKRTNSAKVIQNCKDKLSEVRKNGCSENWDE-----WGKLRIVLDRAYKEEEGYWSQ 176
W K K N+ I LS ++ EN+ W ++ ++ R EE YW Q
Sbjct: 194 WSKEKFPNNLSRINLLMKSLSNLQSGPLEENYRHQESAIWDEMSVLWSR----EETYWKQ 249
Query: 177 KARINWLK*GDKNSKFFHACTIQRRKGNCIENLIRNNGMVCSSHVEIEKEVESFYHSLFE 356
++R+NWL GD N+KFFH T+QRR+ N IE L+++ G S I +E F+ +LF+
Sbjct: 250 RSRLNWLSAGDANTKFFHTTTLQRRQRNKIETLLKSEGNCISGDQAIREEFGIFFGNLFK 309
Query: 357 SSNLDIDLSILDGIPQSISASMNQILTRYVEGDEIRKALFDLSPNKDLGLDGMSPLFFQY 536
S IL+ + SI+ + N+ LT +E+R A+ L K G DG LF+
Sbjct: 310 SGGPRNWGGILNCVHASITEAQNKRLTDPFSMEEVRTAVKQLGSLKAPGPDGFPGLFYDR 369
Query: 537 SWHIIANKLFLAVKDFFRCGKMLRSVDHTIVTLIPKIKNPSSIAHFR 677
W II N + V DFF L ++HT + LIPKI P+S+ HFR
Sbjct: 370 FWEIIQNFVNNLVTDFFLGNSRLELLNHTHIVLIPKIPKPTSVNHFR 416
>gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]
Length = 381
Score = 129 bits (325), Expect = 6e-28
Identities = 78/222 (35%), Positives = 114/222 (51%)
Frame = +3
Query: 12 WCKGKRTNSAKVIQNCKDKLSEVRKNGCSENWDEWGKLRIVLDRAYKEEEGYWSQKARIN 191
W K K TNSAK I+ + E + E LR L +AYK+EE +W K+RI
Sbjct: 87 WKKAKNTNSAKRIKALTALIDEAHSDPLCP-LSEIHNLRKELLQAYKDEEAFWRNKSRIQ 145
Query: 192 WLK*GDKNSKFFHACTIQRRKGNCIENLIRNNGMVCSSHVEIEKEVESFYHSLFESSNLD 371
WL GD+N +FFHA T RR N I ++ N G + EI KE ++ +F SS
Sbjct: 146 WLTYGDRNIRFFHASTKNRRAKNKILSIQNNLGEEVFGNKEISKEALRYFSEIFTSSLQG 205
Query: 372 IDLSILDGIPQSISASMNQILTRYVEGDEIRKALFDLSPNKDLGLDGMSPLFFQYSWHII 551
L I + +S N L+R V +E+R ++F + + G DG++ F+Q W I+
Sbjct: 206 NIQDSLGNINRVVSDECNAYLSRDVTAEEVRISVFSIGATRAPGPDGLTASFYQTYWDIV 265
Query: 552 ANKLFLAVKDFFRCGKMLRSVDHTIVTLIPKIKNPSSIAHFR 677
+ V+ FF G+ ++HT + LIPKI NP ++ FR
Sbjct: 266 GPAVVEEVRHFFNTGEFYSDLNHTNLCLIPKITNPITMKDFR 307
>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1094
Score = 129 bits (324), Expect = 8e-28
Identities = 74/214 (34%), Positives = 115/214 (53%), Gaps = 6/214 (2%)
Frame = +3
Query: 54 NCKDKLSEVR------KNGCSENWDEWGKLRIVLDRAYKEEEGYWSQKARINWLK*GDKN 215
N K +++++R K+ +W + L+ VL AY+EEE +W K+R W+ GDKN
Sbjct: 21 NAKSRITKLRRELDKEKSATFPSWTQISLLQDVLGDAYREEEDFWRLKSRDKWMVGGDKN 80
Query: 216 SKFFHACTIQRRKGNCIENLIRNNGMVCSSHVEIEKEVESFYHSLFESSNLDIDLSILDG 395
SKFF A R N + L+ NG + + E K +F+ LF SS S+L+G
Sbjct: 81 SKFFQATVKANRVSNSLRFLVDENGNEQTVNREKGKIAVTFFEDLFSSSYPSSMDSVLEG 140
Query: 396 IPQSISASMNQILTRYVEGDEIRKALFDLSPNKDLGLDGMSPLFFQYSWHIIANKLFLAV 575
+ ++ MNQ LT+ V EI KA+F ++ G DG + LFFQ W ++ N++ +
Sbjct: 141 FNKRVTEDMNQDLTKKVNEQEIYKAVFSINAESAPGPDGFTALFFQRQWPLVKNQIISDI 200
Query: 576 KDFFRCGKMLRSVDHTIVTLIPKIKNPSSIAHFR 677
+ FF+ G + +HT + LIPKI P+ +A R
Sbjct: 201 ELFFQTGILPEDWNHTHLCLIPKITKPARMADIR 234
>gb|EMJ04900.1| hypothetical protein PRUPE_ppa020995mg, partial [Prunus persica]
Length = 1367
Score = 129 bits (323), Expect = 1e-27
Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 4/229 (1%)
Frame = +3
Query: 3 LIDWCK---GKRTNSAKVIQNCKDKLSEVRKNGCSENWDEWGK-LRIVLDRAYKEEEGYW 170
L+ W K G N K+ Q +KL E+ S + E L LD + E YW
Sbjct: 554 LLGWSKCNFGHLPNQIKITQ---EKLGELLDAPPSHHTVELRNVLTKQLDSLMAKNEVYW 610
Query: 171 SQKARINWLK*GDKNSKFFHACTIQRRKGNCIENLIRNNGMVCSSHVEIEKEVESFYHSL 350
Q++R WLK GD+NSKFFH RR+ N I L +G ++ + + V +++ L
Sbjct: 611 RQRSRATWLKAGDRNSKFFHYKASSRRRRNTISALEDEHGHWQTTEQGLTQTVVNYFQHL 670
Query: 351 FESSNLDIDLSILDGIPQSISASMNQILTRYVEGDEIRKALFDLSPNKDLGLDGMSPLFF 530
F S+ ++DG+ ++ MNQ L +EI+ ALF + P+K G DG SP F+
Sbjct: 671 FSSTGSSEYTGVVDGVRGRVTEEMNQTLLAEFTPEEIKIALFQMHPSKAPGPDGFSPFFY 730
Query: 531 QYSWHIIANKLFLAVKDFFRCGKMLRSVDHTIVTLIPKIKNPSSIAHFR 677
Q W I+ + AV FF+ GK+L+ ++ T V LIPK+ P ++ R
Sbjct: 731 QKYWQIVGEDVVAAVLHFFKTGKLLKKINFTHVALIPKVHEPKNMMQLR 779
>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
Length = 1270
Score = 128 bits (322), Expect = 1e-27
Identities = 78/246 (31%), Positives = 122/246 (49%), Gaps = 24/246 (9%)
Frame = +3
Query: 12 WCKGKRTNSAKV---IQNCKDKLSEVRKNGCSENWDEWGKLRIVLDR------------- 143
W +GK + V ++ C+ LS +K + D+ +L L++
Sbjct: 223 WSRGKHGTNISVADRLRACRKSLSSWKKQNNLNSLDKINQLEAALEKEQSLVWPIFQRVS 282
Query: 144 --------AYKEEEGYWSQKARINWLK*GDKNSKFFHACTIQRRKGNCIENLIRNNGMVC 299
AY+EEE YW QK+R WL+ G++NSK+FHA Q R+ IE L NG +
Sbjct: 283 VLKKDLAKAYREEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQ 342
Query: 300 SSHVEIEKEVESFYHSLFESSNLDIDLSILDGIPQSISASMNQILTRYVEGDEIRKALFD 479
+S + +++ +LF+SSN G+ +S MN+ L V EI++A+F
Sbjct: 343 TSEAAKGEVAAAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFS 402
Query: 480 LSPNKDLGLDGMSPLFFQYSWHIIANKLFLAVKDFFRCGKMLRSVDHTIVTLIPKIKNPS 659
+ P G DGMS LFFQ+ W + N++ VK FF G M ++T + LIPK ++P+
Sbjct: 403 IKPASAPGPDGMSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPT 462
Query: 660 SIAHFR 677
+ R
Sbjct: 463 EMVDLR 468
>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
Length = 1254
Score = 128 bits (322), Expect = 1e-27
Identities = 78/246 (31%), Positives = 122/246 (49%), Gaps = 24/246 (9%)
Frame = +3
Query: 12 WCKGKRTNSAKV---IQNCKDKLSEVRKNGCSENWDEWGKLRIVLDR------------- 143
W +GK + V ++ C+ LS +K + D+ +L L++
Sbjct: 226 WSRGKHGTNISVADRLRACRKSLSSWKKQNNLNSLDKINQLEAALEKEQSLVWPIFQRVS 285
Query: 144 --------AYKEEEGYWSQKARINWLK*GDKNSKFFHACTIQRRKGNCIENLIRNNGMVC 299
AY+EEE YW QK+R WL+ G++NSK+FHA Q R+ IE L NG +
Sbjct: 286 VLKKDLAKAYREEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQ 345
Query: 300 SSHVEIEKEVESFYHSLFESSNLDIDLSILDGIPQSISASMNQILTRYVEGDEIRKALFD 479
+S + +++ +LF+SSN G+ +S MN+ L V EI++A+F
Sbjct: 346 TSEAAKGEVAAAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFS 405
Query: 480 LSPNKDLGLDGMSPLFFQYSWHIIANKLFLAVKDFFRCGKMLRSVDHTIVTLIPKIKNPS 659
+ P G DGMS LFFQ+ W + N++ VK FF G M ++T + LIPK ++P+
Sbjct: 406 IKPASAPGPDGMSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPT 465
Query: 660 SIAHFR 677
+ R
Sbjct: 466 EMVDLR 471
>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|62733115|gb|AAX95232.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 1324
Score = 127 bits (319), Expect = 3e-27
Identities = 79/230 (34%), Positives = 121/230 (52%), Gaps = 5/230 (2%)
Frame = +3
Query: 3 LIDWCKGKRTNSAKVIQNCKDKLSEVRKNGCSENW-DEWGKLRIVLDRAYKEEEGYWSQK 179
L DW K + K I+ K L R++ S + L+ LD+ ++ E YW Q+
Sbjct: 736 LWDWSKNFLGDLEKRIKKAKQALEAHRRSPISSSTASREAVLKYRLDKLEEQRELYWRQR 795
Query: 180 ARINWLK*GDKNSKFFHACTIQRRKGNCIENLIRNNGMVCSSHVEIEKEVESFYHSLFES 359
A +WL+ GD+N+KFFH C +R+K N I+ L R++G V + + FY LF +
Sbjct: 796 ANQHWLEKGDRNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLISEFYKQLFTA 855
Query: 360 S---NLDIDLSILDGIPQSISASMNQILTRYVEGDEIRKALFDLSPNK-DLGLDGMSPLF 527
NLD +L +P+ ++++MN L + V +EI+KAL + K G DGM LF
Sbjct: 856 GVPLNLD---ELLQNVPKRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPGSDGMPALF 912
Query: 528 FQYSWHIIANKLFLAVKDFFRCGKMLRSVDHTIVTLIPKIKNPSSIAHFR 677
++ W + + + VKDF G+M S + T+V LIPK+ NP I R
Sbjct: 913 YKQFWECVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPKVPNPERIKDLR 962
>gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japonica Group]
Length = 825
Score = 127 bits (319), Expect = 3e-27
Identities = 79/230 (34%), Positives = 121/230 (52%), Gaps = 5/230 (2%)
Frame = +3
Query: 3 LIDWCKGKRTNSAKVIQNCKDKLSEVRKNGCSENW-DEWGKLRIVLDRAYKEEEGYWSQK 179
L DW K + K I+ K L R++ S + L+ LD+ ++ E YW Q+
Sbjct: 237 LWDWSKNFLGDLEKRIKKAKQALEAHRRSPISSSTASREAVLKYRLDKLEEQRELYWRQR 296
Query: 180 ARINWLK*GDKNSKFFHACTIQRRKGNCIENLIRNNGMVCSSHVEIEKEVESFYHSLFES 359
A +WL+ GD+N+KFFH C +R+K N I+ L R++G V + + FY LF +
Sbjct: 297 ANQHWLEKGDRNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLISEFYKQLFTA 356
Query: 360 S---NLDIDLSILDGIPQSISASMNQILTRYVEGDEIRKALFDLSPNK-DLGLDGMSPLF 527
NLD +L +P+ ++++MN L + V +EI+KAL + K G DGM LF
Sbjct: 357 GVPLNLD---ELLQNVPKRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPGSDGMPALF 413
Query: 528 FQYSWHIIANKLFLAVKDFFRCGKMLRSVDHTIVTLIPKIKNPSSIAHFR 677
++ W + + + VKDF G+M S + T+V LIPK+ NP I R
Sbjct: 414 YKQFWECVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPKVPNPERIKDLR 463
>gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1301
Score = 127 bits (319), Expect = 3e-27
Identities = 79/230 (34%), Positives = 121/230 (52%), Gaps = 5/230 (2%)
Frame = +3
Query: 3 LIDWCKGKRTNSAKVIQNCKDKLSEVRKNGCSENW-DEWGKLRIVLDRAYKEEEGYWSQK 179
L DW K + K I+ K L R++ S + L+ LD+ ++ E YW Q+
Sbjct: 713 LWDWSKNFLGDLEKRIKKAKQALEAHRRSPISSSTASREAVLKYRLDKLEEQRELYWRQR 772
Query: 180 ARINWLK*GDKNSKFFHACTIQRRKGNCIENLIRNNGMVCSSHVEIEKEVESFYHSLFES 359
A +WL+ GD+N+KFFH C +R+K N I+ L R++G V + + FY LF +
Sbjct: 773 ANQHWLEKGDRNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLISEFYKQLFTA 832
Query: 360 S---NLDIDLSILDGIPQSISASMNQILTRYVEGDEIRKALFDLSPNK-DLGLDGMSPLF 527
NLD +L +P+ ++++MN L + V +EI+KAL + K G DGM LF
Sbjct: 833 GVPLNLD---ELLQNVPKRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPGSDGMPALF 889
Query: 528 FQYSWHIIANKLFLAVKDFFRCGKMLRSVDHTIVTLIPKIKNPSSIAHFR 677
++ W + + + VKDF G+M S + T+V LIPK+ NP I R
Sbjct: 890 YKQFWECVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPKVPNPERIKDLR 939
>gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 127 bits (318), Expect = 4e-27
Identities = 75/226 (33%), Positives = 115/226 (50%), Gaps = 1/226 (0%)
Frame = +3
Query: 3 LIDWCKGKRTNSAKVIQNCKDKLSEVRKNGCSENWDEW-GKLRIVLDRAYKEEEGYWSQK 179
L+ W K + I+ ++KL E+ S + E L LD + E YW Q
Sbjct: 643 LLGWSKCNFGHLPNQIKITREKLGELLDAPPSHHTAELRNALTKQLDSLMAKNEVYWRQC 702
Query: 180 ARINWLK*GDKNSKFFHACTIQRRKGNCIENLIRNNGMVCSSHVEIEKEVESFYHSLFES 359
+R WLK GD+NSKFFH RR+ N I L +G ++ + + V +++ LF S
Sbjct: 703 SRATWLKAGDRNSKFFHYKASSRRRRNTISALEDEHGHWQTTEQGLTQTVVNYFQHLFSS 762
Query: 360 SNLDIDLSILDGIPQSISASMNQILTRYVEGDEIRKALFDLSPNKDLGLDGMSPLFFQYS 539
+ ++DG+ ++ MNQ L +EI+ ALF + P+K G DG SP F+Q
Sbjct: 763 TGSSEYTEVVDGVRGRVTEEMNQALLAVFTPEEIKIALFQMHPSKAPGPDGFSPFFYQKY 822
Query: 540 WHIIANKLFLAVKDFFRCGKMLRSVDHTIVTLIPKIKNPSSIAHFR 677
W I+ + AV FF+ GK+L+ ++ T V LIPK+ P ++ R
Sbjct: 823 WPIVGEDVVAAVLHFFKTGKLLKRINFTHVALIPKVHEPKNMMQLR 868
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 127 bits (318), Expect = 4e-27
Identities = 78/222 (35%), Positives = 117/222 (52%)
Frame = +3
Query: 12 WCKGKRTNSAKVIQNCKDKLSEVRKNGCSENWDEWGKLRIVLDRAYKEEEGYWSQKARIN 191
W K + I++ K +L +V + + +E +L + L AY++EE YW QK+R
Sbjct: 69 WRKSLIPFGRQTIEDLKAEL-DVAQRDDDRSREEITELTLRLKEAYRDEEQYWYQKSRSL 127
Query: 192 WLK*GDKNSKFFHACTIQRRKGNCIENLIRNNGMVCSSHVEIEKEVESFYHSLFESSNLD 371
W+K GD NSKFFHA T QRR N I L NG+ +I+ S++ +LF ++N
Sbjct: 128 WMKLGDNNSKFFHALTKQRRARNRITGLHDENGIWSIEDDDIQNIAVSYFQNLFTTANPQ 187
Query: 372 IDLSILDGIPQSISASMNQILTRYVEGDEIRKALFDLSPNKDLGLDGMSPLFFQYSWHII 551
+ L + I+ +N +LT E+R ALF + P K G DGM+ LFFQ SW II
Sbjct: 188 VFDEALGEVQVLITDRINDLLTADATECEVRAALFMIHPEKAPGPDGMTALFFQKSWAII 247
Query: 552 ANKLFLAVKDFFRCGKMLRSVDHTIVTLIPKIKNPSSIAHFR 677
+ L V F + G + ++ T + LIPK + P+ + R
Sbjct: 248 KSDLLSLVNSFLQEGVFDKRLNTTNICLIPKTERPTRMTELR 289
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 126 bits (317), Expect = 5e-27
Identities = 73/225 (32%), Positives = 125/225 (55%), Gaps = 3/225 (1%)
Frame = +3
Query: 12 WCKGKRTNSAKVIQNCKDKLSEVRKNGCSENWDEWGKLRIVLDRAYK---EEEGYWSQKA 182
W K K +N + + D LS++ K S D ++ I+ D+ K ++E YW Q++
Sbjct: 893 WSKEKFSNPSVQVA---DLLSDIEKLHQSNPPDAHHQINILTDQVTKLWTQDEMYWHQRS 949
Query: 183 RINWLK*GDKNSKFFHACTIQRRKGNCIENLIRNNGMVCSSHVEIEKEVESFYHSLFESS 362
R+NWLK GD+NS FFH TIQRR+ N I L ++G S ++ + ++ +L++S+
Sbjct: 950 RVNWLKLGDQNSSFFHQTTIQRRQYNKIVRLKDDHGNWLDSEADVALQFLDYFTALYQSN 1009
Query: 363 NLDIDLSILDGIPQSISASMNQILTRYVEGDEIRKALFDLSPNKDLGLDGMSPLFFQYSW 542
+LD + +++A MN+IL+ V E++KA+FDL K G DG S +F+Q W
Sbjct: 1010 GPQQWEEVLDFVDTAVTAEMNKILSSPVSLLEVKKAVFDLGATKAPGPDGFSGIFYQNQW 1069
Query: 543 HIIANKLFLAVKDFFRCGKMLRSVDHTIVTLIPKIKNPSSIAHFR 677
+ + + + +L+ ++ T + LIPK+K P+ +H+R
Sbjct: 1070 EWVQSIIHESALQHQTSSSLLQVMNRTHLALIPKVKAPTHPSHYR 1114
>ref|XP_004295858.1| PREDICTED: uncharacterized protein LOC101314838 [Fragaria vesca
subsp. vesca]
Length = 1524
Score = 125 bits (315), Expect = 9e-27
Identities = 64/193 (33%), Positives = 109/193 (56%), Gaps = 5/193 (2%)
Frame = +3
Query: 114 WGKLRIVLDRAYKE----EEGYWSQK-ARINWLK*GDKNSKFFHACTIQRRKGNCIENLI 278
W K R+ L++ KE E+ +W Q+ +R+ WL GD N+++FH R+K N ++ L
Sbjct: 803 WAKERVGLEKELKELLHKEQTFWQQRGSRVLWLTEGDLNTRYFHQKATNRKKKNTLKGLF 862
Query: 279 RNNGMVCSSHVEIEKEVESFYHSLFESSNLDIDLSILDGIPQSISASMNQILTRYVEGDE 458
+G+ C+ E+E+ + +Y SLF +S + L + +S M + L R + +E
Sbjct: 863 NEDGVWCNDESEMEEIIICYYKSLFTTSRPRVQEDDLRFVSNVVSEDMTRSLNRDISKEE 922
Query: 459 IRKALFDLSPNKDLGLDGMSPLFFQYSWHIIANKLFLAVKDFFRCGKMLRSVDHTIVTLI 638
+ KAL + P+K G DG S +F+Q W I+ + +AV++F +++R ++HT VTLI
Sbjct: 923 VVKALKQMHPSKAPGPDGFSLVFYQQFWEIVGVDVVMAVREFLNSEELIREINHTWVTLI 982
Query: 639 PKIKNPSSIAHFR 677
PK+K P + R
Sbjct: 983 PKVKTPEYVHQLR 995
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 125 bits (315), Expect = 9e-27
Identities = 68/182 (37%), Positives = 107/182 (58%), Gaps = 1/182 (0%)
Frame = +3
Query: 135 LDRAYKEEEGYWSQKARINWLK*GDKNSKFFHACTIQRRKGNCIENLIRNNGMVCSSHVE 314
LD ++ EE YW +AR N ++ GDKN+K+FH QR++ N I L+ NG+ E
Sbjct: 328 LDEIHRLEESYWHARARANEIRDGDKNTKYFHHKASQRKRRNTINELLDENGVWKKGREE 387
Query: 315 IEKEVESFYHSLFES-SNLDIDLSILDGIPQSISASMNQILTRYVEGDEIRKALFDLSPN 491
I V+ ++ LF + S ++++L+ L+G+ +S MN L GDE+++ALF + PN
Sbjct: 388 ICGVVQHYFEGLFATDSPVNMELA-LEGLSHCVSTDMNTALLMLPSGDEVKEALFAMHPN 446
Query: 492 KDLGLDGMSPLFFQYSWHIIANKLFLAVKDFFRCGKMLRSVDHTIVTLIPKIKNPSSIAH 671
K G+DG+ LFFQ WHI+ + + V+ ++R L V+ T + LIPK +P S+
Sbjct: 447 KAPGIDGLHALFFQKFWHILGSDVISFVQSWWRGMGDLGVVNKTCIVLIPKCDHPQSMKD 506
Query: 672 FR 677
FR
Sbjct: 507 FR 508
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 124 bits (312), Expect = 2e-26
Identities = 68/222 (30%), Positives = 118/222 (53%)
Frame = +3
Query: 12 WCKGKRTNSAKVIQNCKDKLSEVRKNGCSENWDEWGKLRIVLDRAYKEEEGYWSQKARIN 191
W + + +SA IQ + KL K + E +L+ L + Y EE +W +K+RI
Sbjct: 285 WKRVSKPSSAVRIQELQFKLDAATKQIPFDR-RELARLKKELSQEYNNEEQFWQEKSRIM 343
Query: 192 WLK*GDKNSKFFHACTIQRRKGNCIENLIRNNGMVCSSHVEIEKEVESFYHSLFESSNLD 371
W++ GD+N+K+FHA T RR N I+ LI G +S ++ + E+++ LF S ++
Sbjct: 344 WMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEGREWTSDEDLGRVAEAYFKKLFASEDVG 403
Query: 372 IDLSILDGIPQSISASMNQILTRYVEGDEIRKALFDLSPNKDLGLDGMSPLFFQYSWHII 551
+ L+ + +S MN L + +E+++A F ++P+K G DGM+ +Q W +
Sbjct: 404 YTVEELENLTPLVSDQMNNNLLAPITKEEVQRATFSINPHKCPGPDGMNGFLYQQFWETM 463
Query: 552 ANKLFLAVKDFFRCGKMLRSVDHTIVTLIPKIKNPSSIAHFR 677
+++ V+ FFR G + ++ T + LIPKI + FR
Sbjct: 464 GDQITEMVQAFFRSGSIEEGMNKTNICLIPKILKAEKMTDFR 505
>gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japonica Group]
Length = 1076
Score = 124 bits (311), Expect = 3e-26
Identities = 70/225 (31%), Positives = 117/225 (52%)
Frame = +3
Query: 3 LIDWCKGKRTNSAKVIQNCKDKLSEVRKNGCSENWDEWGKLRIVLDRAYKEEEGYWSQKA 182
L+ W K K N K I++ ++KL E+R G + +E ++ L+ EE +W Q++
Sbjct: 47 LVSWSKDKIGNVRKKIKDLREKLGELRNIGLLDTDNEVHSVKKELEEMLHREEIWWKQRS 106
Query: 183 RINWLK*GDKNSKFFHACTIQRRKGNCIENLIRNNGMVCSSHVEIEKEVESFYHSLFESS 362
RI WLK GD N+++FH R K N I+ L +N+G + E+++ SF+ L+
Sbjct: 107 RITWLKEGDLNTRYFHLKASWRAKKNKIKKLKKNDGSTTMNKKEMKEINRSFFQQLYTKD 166
Query: 363 NLDIDLSILDGIPQSISASMNQILTRYVEGDEIRKALFDLSPNKDLGLDGMSPLFFQYSW 542
+ +++L+ + IS MN L + +EI ALF + P K G DG F Q +W
Sbjct: 167 DNLNPVNLLNMFHEKISEQMNADLIKPFTNEEISDALFQIGPLKAPGPDGFPARFLQRNW 226
Query: 543 HIIANKLFLAVKDFFRCGKMLRSVDHTIVTLIPKIKNPSSIAHFR 677
++ ++ AV++FF M V+ T++ +IPK + FR
Sbjct: 227 GLLKGEVIAAVRNFFEDEVMQEGVNDTVIVMIPKKNLAEDMKDFR 271
>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 124 bits (311), Expect = 3e-26
Identities = 70/225 (31%), Positives = 117/225 (52%)
Frame = +3
Query: 3 LIDWCKGKRTNSAKVIQNCKDKLSEVRKNGCSENWDEWGKLRIVLDRAYKEEEGYWSQKA 182
L+ W K K N K I++ ++KL E+R G + +E ++ L+ EE +W Q++
Sbjct: 241 LVSWSKDKIGNVRKKIKDLREKLGELRNIGLLDTDNEVHSVKKELEEMLHREEIWWKQRS 300
Query: 183 RINWLK*GDKNSKFFHACTIQRRKGNCIENLIRNNGMVCSSHVEIEKEVESFYHSLFESS 362
RI WLK GD N+++FH R K N I+ L +N+G + E+++ SF+ L+
Sbjct: 301 RITWLKEGDLNTRYFHLKASWRAKKNKIKKLKKNDGSTTMNKKEMKEISRSFFQQLYTKD 360
Query: 363 NLDIDLSILDGIPQSISASMNQILTRYVEGDEIRKALFDLSPNKDLGLDGMSPLFFQYSW 542
+ +++L+ + IS MN L + +EI ALF + P K G DG F Q +W
Sbjct: 361 DNLNPVNLLNMFHEKISEQMNADLIKPFTDEEISDALFQIGPLKAPGPDGFPARFLQRNW 420
Query: 543 HIIANKLFLAVKDFFRCGKMLRSVDHTIVTLIPKIKNPSSIAHFR 677
++ ++ AV++FF M V+ T++ +IPK + FR
Sbjct: 421 GLLKGEVIAAVRNFFEDEVMQEGVNDTVIVMIPKKNLAEDMKDFR 465