BLASTX nr result
ID: Rehmannia22_contig00026957
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00026957
(415 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like iso... 62 6e-08
ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like iso... 62 6e-08
ref|XP_006368764.1| hypothetical protein POPTR_0001s09670g [Popu... 62 8e-08
ref|XP_002299520.2| DNA repair protein and transcription factor ... 62 8e-08
ref|XP_006368763.1| hypothetical protein POPTR_0001s09670g [Popu... 62 8e-08
gb|EMJ11549.1| hypothetical protein PRUPE_ppa001762mg [Prunus pe... 61 2e-07
ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ri... 59 5e-07
ref|XP_006476522.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h... 59 7e-07
ref|XP_006439501.1| hypothetical protein CICLE_v100190882mg, par... 59 7e-07
ref|XP_006584727.1| PREDICTED: DNA repair helicase XPB1-like iso... 59 9e-07
ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like iso... 59 9e-07
gb|EXB37318.1| DNA repair helicase [Morus notabilis] 58 1e-06
gb|EOY24803.1| Xeroderma pigmentosum complementation group B 2 i... 57 2e-06
gb|EOY24802.1| Xeroderma pigmentosum complementation group B 1 i... 57 2e-06
ref|XP_004173655.1| PREDICTED: DNA repair helicase XPB1-like, pa... 57 2e-06
ref|XP_004172213.1| PREDICTED: DNA repair helicase XPB1-like, pa... 57 2e-06
ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cu... 57 2e-06
gb|ABR16132.1| unknown [Picea sitchensis] 57 2e-06
gb|EPS67161.1| hypothetical protein M569_07617, partial [Genlise... 57 3e-06
ref|XP_004503689.1| PREDICTED: DNA repair helicase XPB1-like [Ci... 56 4e-06
>ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Glycine max]
Length = 769
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = -3
Query: 413 GMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 303
GMVYMEYSTG+ K GQ KSKPKDPAKRH LFK+R G
Sbjct: 731 GMVYMEYSTGRNKGQGQIKSKPKDPAKRHFLFKRRYG 767
>ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like isoform X1 [Glycine max]
Length = 768
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = -3
Query: 413 GMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 303
GMVYMEYSTG+ K GQ KSKPKDPAKRH LFK+R G
Sbjct: 730 GMVYMEYSTGRNKGQGQIKSKPKDPAKRHFLFKRRYG 766
>ref|XP_006368764.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa]
gi|550346909|gb|ERP65333.1| hypothetical protein
POPTR_0001s09670g [Populus trichocarpa]
Length = 783
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = -3
Query: 413 GMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 303
GMVYMEYSTGQK GQ K KPKDPAKRH LFK+R G
Sbjct: 747 GMVYMEYSTGQKGGKGQIKGKPKDPAKRHYLFKRRFG 783
>ref|XP_002299520.2| DNA repair protein and transcription factor [Populus trichocarpa]
gi|550346908|gb|EEE84325.2| DNA repair protein and
transcription factor [Populus trichocarpa]
Length = 803
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = -3
Query: 413 GMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 303
GMVYMEYSTGQK GQ K KPKDPAKRH LFK+R G
Sbjct: 767 GMVYMEYSTGQKGGKGQIKGKPKDPAKRHYLFKRRFG 803
>ref|XP_006368763.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa]
gi|550346907|gb|ERP65332.1| hypothetical protein
POPTR_0001s09670g [Populus trichocarpa]
Length = 786
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = -3
Query: 413 GMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 303
GMVYMEYSTGQK GQ K KPKDPAKRH LFK+R G
Sbjct: 750 GMVYMEYSTGQKGGKGQIKGKPKDPAKRHYLFKRRFG 786
>gb|EMJ11549.1| hypothetical protein PRUPE_ppa001762mg [Prunus persica]
Length = 768
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/38 (76%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
Frame = -3
Query: 413 GMVYMEYSTGQKKI-HGQTKSKPKDPAKRHRLFKQRLG 303
GMVYMEYSTG+ K+ GQ KSKPKDPAKRH LFK+R G
Sbjct: 731 GMVYMEYSTGRHKLGKGQMKSKPKDPAKRHHLFKRRFG 768
>ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis]
gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair
helicase, putative [Ricinus communis]
Length = 768
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/39 (74%), Positives = 32/39 (82%), Gaps = 2/39 (5%)
Frame = -3
Query: 413 GMVYMEYSTGQKKIHGQ--TKSKPKDPAKRHRLFKQRLG 303
GMVYMEYSTG+ K+ GQ KSKPKDPAKRH LFK+R G
Sbjct: 730 GMVYMEYSTGRNKLAGQGHIKSKPKDPAKRHYLFKRRYG 768
>ref|XP_006476522.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase XPB1-like
[Citrus sinensis]
Length = 778
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = -3
Query: 413 GMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 303
GMVYMEYSTGQKK+ K KPKDP+KRH LFK+R G
Sbjct: 742 GMVYMEYSTGQKKLGLGQKGKPKDPSKRHYLFKRRFG 778
>ref|XP_006439501.1| hypothetical protein CICLE_v100190882mg, partial [Citrus
clementina] gi|557541763|gb|ESR52741.1| hypothetical
protein CICLE_v100190882mg, partial [Citrus clementina]
Length = 269
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = -3
Query: 413 GMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 303
GMVYMEYSTGQKK+ K KPKDP+KRH LFK+R G
Sbjct: 233 GMVYMEYSTGQKKLGLGQKGKPKDPSKRHYLFKRRFG 269
>ref|XP_006584727.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Glycine max]
Length = 769
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = -3
Query: 413 GMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 303
GMVYMEYST +K GQ KSKPKDPAKRH LFK+R G
Sbjct: 731 GMVYMEYSTVRKGQQGQIKSKPKDPAKRHFLFKRRYG 767
>ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like isoform X1 [Glycine max]
Length = 768
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = -3
Query: 413 GMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 303
GMVYMEYST +K GQ KSKPKDPAKRH LFK+R G
Sbjct: 730 GMVYMEYSTVRKGQQGQIKSKPKDPAKRHFLFKRRYG 766
>gb|EXB37318.1| DNA repair helicase [Morus notabilis]
Length = 787
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = -3
Query: 413 GMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 303
GMVYMEYSTG+ K+ GQ KSKP+DPAKRH LFK+R G
Sbjct: 752 GMVYMEYSTGKGKLIGQ-KSKPRDPAKRHYLFKRRYG 787
>gb|EOY24803.1| Xeroderma pigmentosum complementation group B 2 isoform 2, partial
[Theobroma cacao]
Length = 809
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/39 (71%), Positives = 31/39 (79%), Gaps = 2/39 (5%)
Frame = -3
Query: 413 GMVYMEYSTGQKKI--HGQTKSKPKDPAKRHRLFKQRLG 303
GMVYMEYSTG+ K GQ KSKPKDP+KRH LFK+R G
Sbjct: 771 GMVYMEYSTGKHKYPGQGQIKSKPKDPSKRHYLFKRRYG 809
>gb|EOY24802.1| Xeroderma pigmentosum complementation group B 1 isoform 1
[Theobroma cacao]
Length = 771
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/39 (71%), Positives = 31/39 (79%), Gaps = 2/39 (5%)
Frame = -3
Query: 413 GMVYMEYSTGQKKI--HGQTKSKPKDPAKRHRLFKQRLG 303
GMVYMEYSTG+ K GQ KSKPKDP+KRH LFK+R G
Sbjct: 733 GMVYMEYSTGKHKYPGQGQIKSKPKDPSKRHYLFKRRYG 771
>ref|XP_004173655.1| PREDICTED: DNA repair helicase XPB1-like, partial [Cucumis sativus]
Length = 78
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/36 (77%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Frame = -3
Query: 413 GMVYMEYSTGQKKI-HGQTKSKPKDPAKRHRLFKQR 309
GMVYMEYSTG+K GQ KSKPKDPAKRH LFK+R
Sbjct: 41 GMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKR 76
>ref|XP_004172213.1| PREDICTED: DNA repair helicase XPB1-like, partial [Cucumis sativus]
Length = 725
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/36 (77%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Frame = -3
Query: 413 GMVYMEYSTGQKKI-HGQTKSKPKDPAKRHRLFKQR 309
GMVYMEYSTG+K GQ KSKPKDPAKRH LFK+R
Sbjct: 688 GMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKR 723
>ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cucumis sativus]
Length = 768
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/36 (77%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Frame = -3
Query: 413 GMVYMEYSTGQKKI-HGQTKSKPKDPAKRHRLFKQR 309
GMVYMEYSTG+K GQ KSKPKDPAKRH LFK+R
Sbjct: 731 GMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKR 766
>gb|ABR16132.1| unknown [Picea sitchensis]
Length = 772
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/39 (69%), Positives = 31/39 (79%), Gaps = 2/39 (5%)
Frame = -3
Query: 413 GMVYMEYSTGQKK--IHGQTKSKPKDPAKRHRLFKQRLG 303
GMVYMEYSTG+ K + GQ KSKP+DP KRH LFK+R G
Sbjct: 734 GMVYMEYSTGRGKQGMQGQMKSKPRDPTKRHNLFKKRFG 772
>gb|EPS67161.1| hypothetical protein M569_07617, partial [Genlisea aurea]
Length = 167
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/37 (72%), Positives = 33/37 (89%), Gaps = 2/37 (5%)
Frame = -3
Query: 413 GMVYMEYSTG-QKKI-HGQTKSKPKDPAKRHRLFKQR 309
GMVYMEYSTG QKK+ HG K+KPKDP+KRH+LF++R
Sbjct: 129 GMVYMEYSTGGQKKVLHGHAKTKPKDPSKRHQLFRKR 165
>ref|XP_004503689.1| PREDICTED: DNA repair helicase XPB1-like [Cicer arietinum]
Length = 765
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = -3
Query: 413 GMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 303
GMVYMEYSTG+K Q KSKPKDPAKRH LFK+R G
Sbjct: 728 GMVYMEYSTGRKG-QAQIKSKPKDPAKRHFLFKRRYG 763