BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00026920
         (1847 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   847   0.0  
gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlise...   843   0.0  
ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   825   0.0  
emb|CBI37517.3| unnamed protein product [Vitis vinifera]              809   0.0  
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   809   0.0  
ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [F...   798   0.0  
gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]       795   0.0  
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   791   0.0  
ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Popu...   788   0.0  
ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   764   0.0  
ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   756   0.0  
gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobrom...   748   0.0  
ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana] gi|...   732   0.0  
ref|XP_006581778.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   731   0.0  
ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   731   0.0  
ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arab...   730   0.0  
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   730   0.0  
ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [O...   726   0.0  
ref|XP_006581777.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   723   0.0  
ref|XP_006279975.1| hypothetical protein CARUB_v10025845mg [Caps...   722   0.0  

>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
          Length = 915

 Score =  847 bits (2187), Expect = 0.0
 Identities = 414/560 (73%), Positives = 456/560 (81%), Gaps = 6/560 (1%)
 Frame = -1

Query: 1847 TIVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHH 1668
            T+VQEQ+GHPVWG YAQRLLDP++ LWRNPSGGGHDDKAHPPIHPTKFSAGE+ WS DHH
Sbjct: 360  TMVQEQEGHPVWGIYAQRLLDPQSGLWRNPSGGGHDDKAHPPIHPTKFSAGETRWSQDHH 419

Query: 1667 KVYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMI 1488
            +VYELVVRHFLACVSQPA+GAET VEIDIA E FSA GRVI+AKNYLDVYRFE+WGGS+I
Sbjct: 420  RVYELVVRHFLACVSQPAVGAETIVEIDIAGESFSACGRVILAKNYLDVYRFESWGGSVI 479

Query: 1487 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYA 1308
            PTY++GQQFTPTTLTLD+GVTRPPPLLSEADLL CMDKAGIGTDATMHDHIKKLLDRFYA
Sbjct: 480  PTYSFGQQFTPTTLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYA 539

Query: 1307 TKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQ 1128
             KDS+ RFSPTKLGEALVMGYDDMGYELWKPYLRAMME DMKAVS+GTKRKAEVLE CLQ
Sbjct: 540  IKDSNTRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSIGTKRKAEVLETCLQ 599

Query: 1127 QMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPD 948
            QMKACF DAR NKGKL EAMA+FFERSNRS+  EQ A+G+VVR+CGLC ESDMVLR+KPD
Sbjct: 600  QMKACFSDARTNKGKLLEAMAIFFERSNRSSGGEQQAVGDVVRRCGLCLESDMVLRQKPD 659

Query: 947  GNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVN 768
            GNFMVGCLG+PQCRNVVWLPGSVSEA VT N C++CSPGPV+ IQFKFRRLEIPPNY+V 
Sbjct: 660  GNFMVGCLGYPQCRNVVWLPGSVSEASVTENTCTSCSPGPVFKIQFKFRRLEIPPNYSVQ 719

Query: 767  HLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAW----QT 600
            HLGCIGGCDDILRQLVE+CGTGSRNNS+                        +     QT
Sbjct: 720  HLGCIGGCDDILRQLVEICGTGSRNNSNTSGRGRGNPTASSSAQRGNSRAQSSCAYCRQT 779

Query: 599  GHSSGSYANAPESSRGRNSRSQEA--GESSIPCSSCGAPCNLRTANTLANRGRKFYSCQA 426
            GH S    +  ++SRGR +R+QE   GESSIPC+SCGAPC LRTANT  NRGRKF+SCQ+
Sbjct: 780  GHLSNDCPS--QASRGRTARAQEVDNGESSIPCNSCGAPCILRTANTANNRGRKFFSCQS 837

Query: 425  QGCNFFVWEDNASSGGTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGEPIS 246
            Q CNFFVWEDN  +GG   R +                           SF+SATGEPI+
Sbjct: 838  QECNFFVWEDNL-NGGRAERAN-TSASTSSGRGGRGRGRGQSGAHSSNVSFVSATGEPIT 895

Query: 245  GRCFVCGDPGHFANACPNRG 186
            GRCF+CGDPGHFAN CP RG
Sbjct: 896  GRCFICGDPGHFANVCPRRG 915


>gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlisea aurea]
          Length = 813

 Score =  843 bits (2179), Expect = 0.0
 Identities = 415/577 (71%), Positives = 448/577 (77%), Gaps = 24/577 (4%)
 Frame = -1

Query: 1847 TIVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHH 1668
            TIVQEQQGHP WGSYAQRLLDPE  LW+NP  GGHDDKAHPPIHPTKFS+GESGWS DHH
Sbjct: 259  TIVQEQQGHPAWGSYAQRLLDPETGLWKNPGAGGHDDKAHPPIHPTKFSSGESGWSQDHH 318

Query: 1667 KVYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMI 1488
            KVYELVVRHFLACVSQPAIGAETTVEIDIA EQFSASGR IIAKNYLDVYRFE WGGS+I
Sbjct: 319  KVYELVVRHFLACVSQPAIGAETTVEIDIASEQFSASGRAIIAKNYLDVYRFEKWGGSLI 378

Query: 1487 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYA 1308
            P Y YGQQF PTTLTLD+GVTRPPPLLSEADLL CMDKAGIGTDATMHDHIKKLLDR YA
Sbjct: 379  PAYAYGQQFIPTTLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRCYA 438

Query: 1307 TKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQ 1128
            TKDS+ RFSPTKLGEALVMGYDDMGYELWKP+LRAMMESDMK+VSMGTKRK EVLEACLQ
Sbjct: 439  TKDSNTRFSPTKLGEALVMGYDDMGYELWKPHLRAMMESDMKSVSMGTKRKGEVLEACLQ 498

Query: 1127 QMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPD 948
            QMKACF+DAR NK KLFEAM VFFERSNRS + +QH  G++VRKCGLCQESDMVLRKKPD
Sbjct: 499  QMKACFLDARANKEKLFEAMGVFFERSNRSQTADQHMSGDIVRKCGLCQESDMVLRKKPD 558

Query: 947  GNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVN 768
            GNFMVGCLG+PQCRNVVWLPGSVS A VTT +CSTCSPGPVY+IQFKFR+LEIPPNYNV+
Sbjct: 559  GNFMVGCLGYPQCRNVVWLPGSVSSASVTTVVCSTCSPGPVYMIQFKFRQLEIPPNYNVD 618

Query: 767  HLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSS 588
            HLGC+GGCD +LRQLVE+CGTGSR+NS+V                           G +S
Sbjct: 619  HLGCVGGCDSVLRQLVEICGTGSRSNSNVPGTG----------------------QGQTS 656

Query: 587  GSYANAPESSRGRNSRSQE---------------------AGESSIPCSSCGAPCNLRTA 471
             S  N P+    RN  +                       AGESS+PC SCGAPCNLRTA
Sbjct: 657  SSSFNHPQHGNLRNRGAAHPTTTGRSSARHPSPSSTTHVGAGESSVPCGSCGAPCNLRTA 716

Query: 470  NTLANRGRKFYSCQAQGCNFFVWEDNASSGGT---VPRGSIXXXXXXXXXXXXXXXXXXX 300
            NT ANRGR+FYSCQAQ CNFFVW+D+A SGG       G                     
Sbjct: 717  NTAANRGRQFYSCQAQSCNFFVWKDDAGSGGVRGGDGGGVSRRGGSSNQRGRGWGRRRHD 776

Query: 299  XXXXXXXSFMSATGEPISGRCFVCGDPGHFANACPNR 189
                   SF+SATGEP+SGRCF+CG+P HFAN CPNR
Sbjct: 777  EQRRATTSFVSATGEPVSGRCFLCGEPSHFANECPNR 813


>ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum lycopersicum]
          Length = 910

 Score =  825 bits (2131), Expect = 0.0
 Identities = 406/556 (73%), Positives = 446/556 (80%), Gaps = 2/556 (0%)
 Frame = -1

Query: 1847 TIVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHH 1668
            T+VQEQ+GHPVWG+YAQRLLDP++ LWRNPSGGGHDDKAHPPIHPTKFSAGE+ WS DHH
Sbjct: 360  TMVQEQEGHPVWGTYAQRLLDPQSGLWRNPSGGGHDDKAHPPIHPTKFSAGETRWSQDHH 419

Query: 1667 KVYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMI 1488
            +VYELVVRHFLACVSQPA+GAET VEIDIA E FSA GRVI+AKNYLDVYRFE+WGGS+I
Sbjct: 420  RVYELVVRHFLACVSQPAVGAETIVEIDIAGESFSACGRVILAKNYLDVYRFESWGGSVI 479

Query: 1487 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYA 1308
            PTY++GQQFTPTTLTLD+GV RPPPLLSEADLL CMDKAGIGTDATMHDHIKKLLDRFYA
Sbjct: 480  PTYSFGQQFTPTTLTLDSGVIRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYA 539

Query: 1307 TKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQ 1128
             KDS+ RFSPTKLGEALVMGYDDMGYELWKPYLRAMME DMKAVS GTKRKAEVLE CLQ
Sbjct: 540  IKDSNTRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSTGTKRKAEVLETCLQ 599

Query: 1127 QMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPD 948
            QMKACF DAR NK KL EAMA+FFERSNRS+S EQ A+G VVR+CGLC ESDMVLR+KPD
Sbjct: 600  QMKACFSDARTNKEKLLEAMAIFFERSNRSSSGEQQAVGAVVRRCGLCLESDMVLRQKPD 659

Query: 947  GNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVN 768
            GNFMVGCLG+PQCRNVVWLPGSVSEA VT N C TCSPGPV+ IQFKFR+ EIPP+Y+V 
Sbjct: 660  GNFMVGCLGYPQCRNVVWLPGSVSEASVTENTCITCSPGPVFKIQFKFRQQEIPPDYSVQ 719

Query: 767  HLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSS 588
            HLGCIGGCDDILRQLVE+CGTGSRN+                            QTGH S
Sbjct: 720  HLGCIGGCDDILRQLVEICGTGSRNSRGRGNPTAFSSAQRDNSRAQSSCAYCR-QTGHLS 778

Query: 587  GSYANAPESSRGRNSRSQEA--GESSIPCSSCGAPCNLRTANTLANRGRKFYSCQAQGCN 414
                +  ++SR R +R+QE   GESS+PC+SCGAPC LRTANT  NRGRKF+SCQ+  CN
Sbjct: 779  NDCPS--QASRDRTARAQEVDNGESSMPCNSCGAPCILRTANTANNRGRKFFSCQSSECN 836

Query: 413  FFVWEDNASSGGTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGEPISGRCF 234
            FFVWEDN  SGG   R +                           SF+SATGEPI+ RCF
Sbjct: 837  FFVWEDNL-SGGRAERAN-TSASTSSGRGGRGRGRGQSGAHSSNVSFVSATGEPITVRCF 894

Query: 233  VCGDPGHFANACPNRG 186
            +CGDPGHFAN CP RG
Sbjct: 895  ICGDPGHFANVCPRRG 910


>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  809 bits (2089), Expect = 0.0
 Identities = 399/564 (70%), Positives = 443/564 (78%), Gaps = 11/564 (1%)
 Frame = -1

Query: 1844 IVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1665
            IVQEQ GHP+WGSYAQRLLDP A LWRNPS GGHDDKAHPPIHPTKFSAGESGWS DH +
Sbjct: 26   IVQEQLGHPIWGSYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHQR 85

Query: 1664 VYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1485
            +YELVVRHFLACVSQPA+GAET VEIDIA E FS+SGRVIIAKNYLDVYRFE+WGGSMIP
Sbjct: 86   LYELVVRHFLACVSQPAVGAETIVEIDIAGESFSSSGRVIIAKNYLDVYRFESWGGSMIP 145

Query: 1484 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1305
            TY +GQQF PTTLTLD+GVTRPPPLLSEADLL+CMDKAGIGTDATMHDHIKKLLDRFYAT
Sbjct: 146  TYVFGQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYAT 205

Query: 1304 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1125
            KDS+ RFSPT LGEALVMGYDDMGYELWKPYLR+MME DMKAVS+GTKR+ EVL  CL+Q
Sbjct: 206  KDSNTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQ 265

Query: 1124 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 945
            MKACF+DARLNK KL EAMA+FFERSNRS+ +EQH +G+VVR+C LCQESDMVLR+KPDG
Sbjct: 266  MKACFLDARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDG 325

Query: 944  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 765
            NFMVGCLG+PQCRNVVWLPGS+SEA +TT  C+ C+PGPVY IQFKFRRLEIPPNYN++H
Sbjct: 326  NFMVGCLGYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDH 385

Query: 764  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 585
            LGC+ GCD+ILRQL E+CGTGSR  S+                          QTGHSS 
Sbjct: 386  LGCVCGCDEILRQLTEICGTGSR-ISARGRGSNASSTNAQRSNTRQTACIHCSQTGHSSN 444

Query: 584  SYANAPESSRGRNSR--SQEAGESSIPCSSCGAPCNLRTANTLANRGRKFYSCQAQGCNF 411
               +    SR   S   +  +GESSIPC+ CG PC LRTANT  NRGRKFYSCQ+Q CNF
Sbjct: 445  DCPSRVPRSRNSQSHRTNMPSGESSIPCNVCGTPCILRTANTENNRGRKFYSCQSQECNF 504

Query: 410  FVWED--NASSGG------TVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGE 255
            FVWED  N+SSGG      T    +                           +F+SATG+
Sbjct: 505  FVWEDSLNSSSGGRSAQPATARSSASNPSRRGGRGRGDRGRGRQSGARTSDTTFVSATGD 564

Query: 254  PISG-RCFVCGDPGHFANACPNRG 186
            P+SG RCFVCGDP HFAN CPNRG
Sbjct: 565  PVSGRRCFVCGDPSHFANVCPNRG 588


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  809 bits (2089), Expect = 0.0
 Identities = 399/564 (70%), Positives = 443/564 (78%), Gaps = 11/564 (1%)
 Frame = -1

Query: 1844 IVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1665
            IVQEQ GHP+WGSYAQRLLDP A LWRNPS GGHDDKAHPPIHPTKFSAGESGWS DH +
Sbjct: 351  IVQEQLGHPIWGSYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHQR 410

Query: 1664 VYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1485
            +YELVVRHFLACVSQPA+GAET VEIDIA E FS+SGRVIIAKNYLDVYRFE+WGGSMIP
Sbjct: 411  LYELVVRHFLACVSQPAVGAETIVEIDIAGESFSSSGRVIIAKNYLDVYRFESWGGSMIP 470

Query: 1484 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1305
            TY +GQQF PTTLTLD+GVTRPPPLLSEADLL+CMDKAGIGTDATMHDHIKKLLDRFYAT
Sbjct: 471  TYVFGQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYAT 530

Query: 1304 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1125
            KDS+ RFSPT LGEALVMGYDDMGYELWKPYLR+MME DMKAVS+GTKR+ EVL  CL+Q
Sbjct: 531  KDSNTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQ 590

Query: 1124 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 945
            MKACF+DARLNK KL EAMA+FFERSNRS+ +EQH +G+VVR+C LCQESDMVLR+KPDG
Sbjct: 591  MKACFLDARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDG 650

Query: 944  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 765
            NFMVGCLG+PQCRNVVWLPGS+SEA +TT  C+ C+PGPVY IQFKFRRLEIPPNYN++H
Sbjct: 651  NFMVGCLGYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDH 710

Query: 764  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 585
            LGC+ GCD+ILRQL E+CGTGSR  S+                          QTGHSS 
Sbjct: 711  LGCVCGCDEILRQLTEICGTGSR-ISARGRGSNASSTNAQRSNTRQTACIHCSQTGHSSN 769

Query: 584  SYANAPESSRGRNSR--SQEAGESSIPCSSCGAPCNLRTANTLANRGRKFYSCQAQGCNF 411
               +    SR   S   +  +GESSIPC+ CG PC LRTANT  NRGRKFYSCQ+Q CNF
Sbjct: 770  DCPSRVPRSRNSQSHRTNMPSGESSIPCNVCGTPCILRTANTENNRGRKFYSCQSQECNF 829

Query: 410  FVWED--NASSGG------TVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGE 255
            FVWED  N+SSGG      T    +                           +F+SATG+
Sbjct: 830  FVWEDSLNSSSGGRSAQPATARSSASNPSRRGGRGRGDRGRGRQSGARTSDTTFVSATGD 889

Query: 254  PISG-RCFVCGDPGHFANACPNRG 186
            P+SG RCFVCGDP HFAN CPNRG
Sbjct: 890  PVSGRRCFVCGDPSHFANVCPNRG 913


>ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [Fragaria vesca subsp.
            vesca]
          Length = 908

 Score =  798 bits (2062), Expect = 0.0
 Identities = 390/559 (69%), Positives = 437/559 (78%), Gaps = 6/559 (1%)
 Frame = -1

Query: 1844 IVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1665
            IVQEQQGHP WGSYAQRLLDP + LWRNPS GGHDDKAHPPIHPTKFSAGES WS DH++
Sbjct: 352  IVQEQQGHPGWGSYAQRLLDPASGLWRNPSSGGHDDKAHPPIHPTKFSAGESNWSQDHNR 411

Query: 1664 VYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1485
            +YELVVRHFLACVSQPA+GAETTVEIDIA E FSASGRVI+AKNYLDVYRFE+WGGS++P
Sbjct: 412  LYELVVRHFLACVSQPAVGAETTVEIDIAGEMFSASGRVILAKNYLDVYRFESWGGSLLP 471

Query: 1484 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1305
            TY  GQQF PTTLTLD+GVTRPPPLLSEADLL CMDK GIGTDATMHDHIKKLLDRFYAT
Sbjct: 472  TYAVGQQFMPTTLTLDSGVTRPPPLLSEADLLGCMDKEGIGTDATMHDHIKKLLDRFYAT 531

Query: 1304 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1125
            KD++ RFSPT LGEALVMGYDDMGY+LWKPYLRA+ME DMKAVS G K KAEVLE CLQQ
Sbjct: 532  KDANTRFSPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKAVSEGNKSKAEVLETCLQQ 591

Query: 1124 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 945
            MK CF+DAR NK KLFEAMAVFFERSNR   ++QH  GE +R+CGLCQE+DMVLRK  DG
Sbjct: 592  MKGCFLDARQNKVKLFEAMAVFFERSNRPGGDDQHTSGEFIRRCGLCQEADMVLRKNRDG 651

Query: 944  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 765
            NFMVGC+G+PQCRN +WLPGSVSEA+ TTNIC++C+PGPV+LIQF FRRLEIPPNY+ NH
Sbjct: 652  NFMVGCMGYPQCRNAIWLPGSVSEAVATTNICNSCTPGPVHLIQFTFRRLEIPPNYSTNH 711

Query: 764  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 585
            LGCIGGCD+ILRQL E+CGTGSR  S+                          Q+GHSSG
Sbjct: 712  LGCIGGCDEILRQLTEICGTGSR--SAARGRGPTTSSNVQQNNTRQGACIYCHQSGHSSG 769

Query: 584  ---SYANAPESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANTLANRGRKFYSCQAQGCN 414
               S ++ P S R R   +Q +GE S+ C++CGAPC LRTANT  NRGRKFY C +Q CN
Sbjct: 770  DCPSQSSGPRSVRPRTMNAQ-SGEISVSCTTCGAPCVLRTANTTQNRGRKFYKCPSQECN 828

Query: 413  FFVWEDNASSG--GTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGEPISGR 240
            FFVWEDN S+G  G   + +                           +F+SATG+P SGR
Sbjct: 829  FFVWEDNVSNGNGGRGFQRANVSAGRGAGGRGSGGRGAQGAGHATGGTFVSATGDPNSGR 888

Query: 239  -CFVCGDPGHFANACPNRG 186
             CFVCGDP HFAN CPNRG
Sbjct: 889  RCFVCGDPSHFANVCPNRG 907


>gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
          Length = 914

 Score =  795 bits (2053), Expect = 0.0
 Identities = 392/560 (70%), Positives = 431/560 (76%), Gaps = 7/560 (1%)
 Frame = -1

Query: 1844 IVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1665
            IVQEQQ HP WGSYAQRLLDP  SLWRNPS GGHDDKAHPPIHPTKFSAGE  WS DH K
Sbjct: 355  IVQEQQDHPEWGSYAQRLLDPGTSLWRNPSSGGHDDKAHPPIHPTKFSAGEHNWSQDHRK 414

Query: 1664 VYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1485
            +YELVVRHFLACVSQPA+GAETTVEIDIA EQFS SGRVI+ +NYLDVYR+E+WGGSMIP
Sbjct: 415  LYELVVRHFLACVSQPAVGAETTVEIDIADEQFSTSGRVILERNYLDVYRYESWGGSMIP 474

Query: 1484 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1305
            TY  GQQF PT+LTLD GVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT
Sbjct: 475  TYTLGQQFIPTSLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 534

Query: 1304 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1125
            KDS+ RFSPTKLGEALVMGYDDMGYELWKP LR+MME DMK VS+G KRK EVL  CLQQ
Sbjct: 535  KDSNTRFSPTKLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQ 594

Query: 1124 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 945
            MKACF+DARLNK KL EAMAVFFERSN+S  ++ H  GEVVR+CGLC+ES MVL+K  DG
Sbjct: 595  MKACFLDARLNKVKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDG 654

Query: 944  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 765
            NFMVGCLGFPQCRN +WLPGSV EA VT+NIC +C+PGPVYLIQFKFR+LEIPP +N NH
Sbjct: 655  NFMVGCLGFPQCRNAIWLPGSVLEAAVTSNICGSCNPGPVYLIQFKFRQLEIPPGFNANH 714

Query: 764  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 585
            LGCIGGCDDILRQL+E+CGTGSR  S+                          QTGHSS 
Sbjct: 715  LGCIGGCDDILRQLIEICGTGSR-MSARGRGPTTTSSNVQRNSSRQGACLYCQQTGHSSN 773

Query: 584  SYANAPESSRGRNSR-SQEAGESSIPCSSCGAPCNLRTANTLANRGRKFYSCQAQGCNFF 408
               +    SR   SR S + GE S+ CS+CG PC LRTANT  NRGRKFYSC +Q CNFF
Sbjct: 774  DCPSQFSGSRNSRSRTSSQNGEPSVSCSTCGTPCVLRTANTANNRGRKFYSCPSQECNFF 833

Query: 407  VWED---NASSGGTVPRGSI--XXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGEPISG 243
            +WED   N + G ++PR  I                            +F+SATG+PISG
Sbjct: 834  IWEDEHNNGTGGRSIPRAGINGSASNSSRGGGRGRGRFGQNGARAADVTFVSATGDPISG 893

Query: 242  -RCFVCGDPGHFANACPNRG 186
             RC+VCGDP HFAN CPNRG
Sbjct: 894  RRCYVCGDPSHFANVCPNRG 913


>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cicer arietinum]
          Length = 920

 Score =  791 bits (2044), Expect = 0.0
 Identities = 392/567 (69%), Positives = 439/567 (77%), Gaps = 14/567 (2%)
 Frame = -1

Query: 1844 IVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1665
            IVQEQQGHP WG YAQRLLDPEA LWRNP GGGHDDKAHPPIHPTKFSAGESGWS DH K
Sbjct: 356  IVQEQQGHPQWGVYAQRLLDPEAGLWRNPRGGGHDDKAHPPIHPTKFSAGESGWSQDHRK 415

Query: 1664 VYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1485
            +YELVVRHFLACVS+PA+GAETTVEIDIA E FSA GRVI+ KNYLDVY++E+WGGS+IP
Sbjct: 416  LYELVVRHFLACVSKPAVGAETTVEIDIAGELFSACGRVILEKNYLDVYQYESWGGSIIP 475

Query: 1484 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1305
            TY  GQQF PTTLTLD+GVTRPPP LSEADLLSCMDK GIGTDATMHDHIKKLLDRFYAT
Sbjct: 476  TYTIGQQFIPTTLTLDSGVTRPPPPLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYAT 535

Query: 1304 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1125
            KD+SMRF+PT LGEALVMGYDDMGY+LWKPYLRA+ME DMK+VS GTK K EVL+  LQQ
Sbjct: 536  KDASMRFTPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKSVSEGTKSKTEVLDTSLQQ 595

Query: 1124 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 945
            MKACF+DARLNK KL EAM +FFERSNRS   EQ+AIGEVVR+CGLC+ESDMVL+K  DG
Sbjct: 596  MKACFLDARLNKVKLLEAMGIFFERSNRSGGEEQNAIGEVVRRCGLCRESDMVLKKSRDG 655

Query: 944  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 765
            NFMVGCLGFPQCRN VWLPGSVSEA+VTTN CS C+PGPVY IQFKFR+LEIPPNY+VNH
Sbjct: 656  NFMVGCLGFPQCRNAVWLPGSVSEAVVTTNTCSNCTPGPVYRIQFKFRQLEIPPNYDVNH 715

Query: 764  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 585
            LGCIGGCD+IL QL E+CGTG R  +                           +TGHSS 
Sbjct: 716  LGCIGGCDEILTQLTEICGTGPRMPAR-PRGPTTSTGNAHHTNPRQAVCMNCQETGHSSN 774

Query: 584  SYANAPESSRGRNSR------SQEAGESSIPCSSCGAPCNLRTANTLANRGRKFYSCQAQ 423
               +  ++ R RN+R      +Q++GE+S+ C+SCG PC LRTANT  NRGRKFYSC +Q
Sbjct: 775  DCPS--QTLRSRNARQHGNVMNQQSGEASVSCNSCGTPCVLRTANTANNRGRKFYSCPSQ 832

Query: 422  GCNFFVWEDNASS---GGTVPRG----SIXXXXXXXXXXXXXXXXXXXXXXXXXXSFMSA 264
             CNFFVWED+ +S   GG+  R     +                           +F+SA
Sbjct: 833  ECNFFVWEDDLNSGTGGGSFTRSNSIPTSNRGRNGRNGGRGARGRGRNASSSSNVTFVSA 892

Query: 263  TGEPISG-RCFVCGDPGHFANACPNRG 186
            TG+PISG RCFVCGDP HFAN CPNRG
Sbjct: 893  TGDPISGRRCFVCGDPSHFANVCPNRG 919


>ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Populus trichocarpa]
            gi|222856496|gb|EEE94043.1| hypothetical protein
            POPTR_0005s06810g [Populus trichocarpa]
          Length = 910

 Score =  788 bits (2036), Expect = 0.0
 Identities = 385/560 (68%), Positives = 434/560 (77%), Gaps = 6/560 (1%)
 Frame = -1

Query: 1847 TIVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHH 1668
            TIVQE Q HPVWGSYAQRLLDP A LWRNPS GGHDDKAHPPIHPTKFSAGES WS DHH
Sbjct: 351  TIVQEHQEHPVWGSYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESRWSQDHH 410

Query: 1667 KVYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMI 1488
            ++YELVVRHFLACVSQPA+GAET VEIDIA E+FSASGRVI+AKNYLDVYRFE+WG SMI
Sbjct: 411  RLYELVVRHFLACVSQPAVGAETVVEIDIAGERFSASGRVILAKNYLDVYRFESWGDSMI 470

Query: 1487 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYA 1308
            PTY  GQQF P TLTLD+GVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFY 
Sbjct: 471  PTYLQGQQFIPATLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYV 530

Query: 1307 TKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQ 1128
            TKD++ RFSPT LGEALVMGYDDMGYELWKP LR++ME DMK VS+G K KAEVL  CLQ
Sbjct: 531  TKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRSLMECDMKEVSVGNKSKAEVLATCLQ 590

Query: 1127 QMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPD 948
            QMKACF+DA++NK KL EAMA+FF RS+RSN ++  A+GE VR CGLCQE++MVL+K  D
Sbjct: 591  QMKACFLDAKVNKVKLLEAMAIFFNRSDRSNGDDSSALGENVRPCGLCQEANMVLKKNRD 650

Query: 947  GNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVN 768
            GNFMVGC GFPQCRN VWLPG V EA +T NIC++C+PGPVYLIQFKFR+LEIPP +NVN
Sbjct: 651  GNFMVGCSGFPQCRNAVWLPGPVLEATITNNICNSCTPGPVYLIQFKFRQLEIPPGFNVN 710

Query: 767  HLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSS 588
            HLGCIGGCD+ LRQL+E+CGTGSR                             +QTGH+S
Sbjct: 711  HLGCIGGCDETLRQLIEICGTGSRVQGG-NGPPTTTPSNPQRSNSRQAPCIYCYQTGHAS 769

Query: 587  GSYANAPESSRGRNSR--SQEAGESSIPCSSCGAPCNLRTANTLANRGRKFYSCQAQGCN 414
                +   ++R   S   +Q+ GESSIPCS+CG PC LRTANT  NRGRKFYSC +Q CN
Sbjct: 770  TDCPSRISATRHVQSHGMNQQNGESSIPCSTCGTPCVLRTANTANNRGRKFYSCSSQACN 829

Query: 413  FFVWEDNASSGG---TVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGEPISG 243
            FFVWEDN ++G    + PR ++                          +F+SATGEPISG
Sbjct: 830  FFVWEDNLNNGSAPRSAPRPNMSNSASNPSRRGGRGRGVQNAGRAADVTFVSATGEPISG 889

Query: 242  -RCFVCGDPGHFANACPNRG 186
             RCFVCGDP HFANACP+RG
Sbjct: 890  RRCFVCGDPSHFANACPSRG 909


>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
          Length = 925

 Score =  764 bits (1974), Expect = 0.0
 Identities = 381/574 (66%), Positives = 431/574 (75%), Gaps = 21/574 (3%)
 Frame = -1

Query: 1844 IVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1665
            IV+EQQ H +WG+YAQRLLDPE+ LWRNPSGGGHDDKAHPPIHPTKFSAGE GWS DHH+
Sbjct: 357  IVREQQEHQIWGAYAQRLLDPESRLWRNPSGGGHDDKAHPPIHPTKFSAGERGWSQDHHR 416

Query: 1664 VYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRV-IIAKNYLDVYRFETWGGSMI 1488
            +YELVVRHFLACVSQPA+GA TTVEIDIA E FS S R   I +NYLDVYRFE+WGGS I
Sbjct: 417  LYELVVRHFLACVSQPAVGAVTTVEIDIAGELFSTSKRANSILRNYLDVYRFESWGGSTI 476

Query: 1487 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYA 1308
            PTY  GQQF PTTLTLD+GVTRPPPLLSEADLLSCMDK GIGTDATMHDHIKKLLDRFYA
Sbjct: 477  PTYVSGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYA 536

Query: 1307 TKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQ 1128
            TKD++ RF+PT LGEALVMGYDDMGY LWKP LRA+ME +MKAVS GTKRK EVL +CLQ
Sbjct: 537  TKDANTRFTPTNLGEALVMGYDDMGYNLWKPNLRAIMEHEMKAVSEGTKRKDEVLASCLQ 596

Query: 1127 QMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPD 948
            QMK CF+DAR+NK KL EAM VFFERSN S  +E  A+GEVV+ CGLCQ+SDMVL++  D
Sbjct: 597  QMKTCFLDARVNKQKLLEAMEVFFERSNGSGGDENRAVGEVVQLCGLCQDSDMVLKRNRD 656

Query: 947  GNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVN 768
            GN+MVGCLGFPQCRNVVWLPGS++EA VT++ C+ C+PGPVYLIQFKFR+LEIPPNYN N
Sbjct: 657  GNYMVGCLGFPQCRNVVWLPGSIAEATVTSDRCTLCTPGPVYLIQFKFRQLEIPPNYNAN 716

Query: 767  HLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSS 588
            HLGC+GGCDDILRQL E+CGTGSR ++                           Q GHSS
Sbjct: 717  HLGCVGGCDDILRQLTEICGTGSRVSA---RGRGTSSSNVQRDNPGQSVCIFCQQVGHSS 773

Query: 587  GSYANAPESSRG-RNSRSQEAGESSIPCSSCGAPCNLRTANTLANRGRKFYSCQAQGCNF 411
                + P  S G R+++ +++GESS+ CSSCG+PC LRTANT  NRGRKFY CQ+Q CNF
Sbjct: 774  N---DCPSQSVGSRSAQRRQSGESSVSCSSCGSPCVLRTANTANNRGRKFYKCQSQECNF 830

Query: 410  FVWEDNASSG--------------GTVPR----GSIXXXXXXXXXXXXXXXXXXXXXXXX 285
            FVWEDN  +G              G+ P     G                          
Sbjct: 831  FVWEDNVDNGNGGNSVQRSNVRSSGSAPSNLNPGQNTGRGRGRGRGRGRDRDRDRGQGQI 890

Query: 284  XXSFMSATGEPISG-RCFVCGDPGHFANACPNRG 186
              +F+SATGEPIS  RCFVCGDP HFAN CPNRG
Sbjct: 891  AATFVSATGEPISDRRCFVCGDPSHFANVCPNRG 924


>ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [Citrus sinensis]
          Length = 940

 Score =  756 bits (1951), Expect = 0.0
 Identities = 373/557 (66%), Positives = 423/557 (75%), Gaps = 4/557 (0%)
 Frame = -1

Query: 1844 IVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1665
            IVQEQ GHP WG YAQRLLD  A LWRNP  GGHDDKAHPPIHPTKFS+GES WS DH+K
Sbjct: 387  IVQEQIGHPDWGPYAQRLLDHAAGLWRNPGSGGHDDKAHPPIHPTKFSSGESRWSQDHYK 446

Query: 1664 VYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1485
            +YELVVRHFLACVSQPA+GAET VEI+IA E FS SGRVI+AKNYLDVYRFE+WGG +IP
Sbjct: 447  LYELVVRHFLACVSQPAVGAETIVEINIAGEVFSTSGRVILAKNYLDVYRFESWGGLVIP 506

Query: 1484 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1305
            TY +GQQF PTTLTLD+GVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYA 
Sbjct: 507  TYVHGQQFIPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAI 566

Query: 1304 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1125
            KD++ RF+PT +GEALVMGYDDMGYELWKP LR+MMESDMK VS+G K KA+VL  CLQQ
Sbjct: 567  KDANTRFAPTNIGEALVMGYDDMGYELWKPNLRSMMESDMKEVSVGNKSKADVLANCLQQ 626

Query: 1124 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 945
            MKACF+DARL K KL EAM +FFE   RS   +Q A GEVVR+CG+CQES+MVL+K  DG
Sbjct: 627  MKACFLDARLKKVKLLEAMGIFFE---RSGGEDQQAAGEVVRQCGICQESNMVLKKSRDG 683

Query: 944  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 765
            N MVGCL FPQCRN VWLPGSVSEA VTTN C++C+PGPVYLIQFKFR+ EIPP +NVNH
Sbjct: 684  NLMVGCLAFPQCRNAVWLPGSVSEAAVTTNTCNSCTPGPVYLIQFKFRQHEIPPGFNVNH 743

Query: 764  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 585
            LGCIGGCD+ LRQL+E+CGTGSR  +                           Q GHSS 
Sbjct: 744  LGCIGGCDETLRQLIEICGTGSRIPAR-GRGPTASSNNGQQSNHRQRACIYCQQMGHSSS 802

Query: 584  SYANAPESSRG--RNSRSQEAGESSIPCSSCGAPCNLRTANTLANRGRKFYSCQAQGCNF 411
               +    SR    N  + ++GESSI C++CG PC LRTANT  NRGRKFYSC +Q CNF
Sbjct: 803  DCPSQFSGSRNARANGMNPQSGESSIQCTTCGTPCVLRTANTANNRGRKFYSCSSQECNF 862

Query: 410  FVWEDNASSG-GTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGEPISG-RC 237
            FVWED+A +G   +P+  +                          +F+SATG+PISG RC
Sbjct: 863  FVWEDDAKNGTRRMPQAGVSGSASNPSQRGGRGRGGQSRGHNTGMTFVSATGDPISGRRC 922

Query: 236  FVCGDPGHFANACPNRG 186
            +VCG+P HFANACPNRG
Sbjct: 923  YVCGEPSHFANACPNRG 939


>gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobroma cacao]
          Length = 845

 Score =  748 bits (1932), Expect = 0.0
 Identities = 362/492 (73%), Positives = 396/492 (80%), Gaps = 4/492 (0%)
 Frame = -1

Query: 1844 IVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1665
            IVQEQQ HP WGSYAQRLLDP  SLWRNPS GGHDDKAHPPIHPTKFSAGE  WS DH K
Sbjct: 355  IVQEQQDHPEWGSYAQRLLDPGTSLWRNPSSGGHDDKAHPPIHPTKFSAGEHNWSQDHRK 414

Query: 1664 VYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1485
            +YELVVRHFLACVSQPA+GAETTVEIDIA EQFS SGRVI+ +NYLDVYR+E+WGGSMIP
Sbjct: 415  LYELVVRHFLACVSQPAVGAETTVEIDIADEQFSTSGRVILERNYLDVYRYESWGGSMIP 474

Query: 1484 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1305
            TY  GQQF PT+LTLD GVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT
Sbjct: 475  TYTLGQQFIPTSLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 534

Query: 1304 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1125
            KDS+ RFSPTKLGEALVMGYDDMGYELWKP LR+MME DMK VS+G KRK EVL  CLQQ
Sbjct: 535  KDSNTRFSPTKLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQ 594

Query: 1124 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 945
            MKACF+DARLNK KL EAMAVFFERSN+S  ++ H  GEVVR+CGLC+ES MVL+K  DG
Sbjct: 595  MKACFLDARLNKVKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDG 654

Query: 944  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 765
            NFMVGCLGFPQCRN +WLPGSV EA VT+NIC +C+PGPVYLIQFKFR+LEIPP +N NH
Sbjct: 655  NFMVGCLGFPQCRNAIWLPGSVLEAAVTSNICGSCNPGPVYLIQFKFRQLEIPPGFNANH 714

Query: 764  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 585
            LGCIGGCDDILRQL+E+CGTGSR  S+                          QTGHSS 
Sbjct: 715  LGCIGGCDDILRQLIEICGTGSR-MSARGRGPTTTSSNVQRNSSRQGACLYCQQTGHSSN 773

Query: 584  SYANAPESSRGRNSRSQE----AGESSIPCSSCGAPCNLRTANTLANRGRKFYSCQAQGC 417
               +    SR   SR+       GE S+ CS+CG PC LRTANT  NRGRKFYSC +Q C
Sbjct: 774  DCPSQFSGSRNSRSRTSSQNGMQGEPSVSCSTCGTPCVLRTANTANNRGRKFYSCPSQEC 833

Query: 416  NFFVWEDNASSG 381
            NFF+WED  ++G
Sbjct: 834  NFFIWEDEHNNG 845


>ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana]
            gi|8777305|dbj|BAA96895.1| DNA topoisomerase III
            [Arabidopsis thaliana] gi|169218912|gb|ACA50279.1|
            topoisomerase 3 alpha [Arabidopsis thaliana]
            gi|332010433|gb|AED97816.1| topoisomerase 3alpha
            [Arabidopsis thaliana]
          Length = 926

 Score =  732 bits (1889), Expect = 0.0
 Identities = 360/568 (63%), Positives = 416/568 (73%), Gaps = 16/568 (2%)
 Frame = -1

Query: 1844 IVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1665
            +V+EQ  HP WGSYAQRLL+PE  LWRNP+ GGHDDKAHPPIHPTKFS+GES WS DH  
Sbjct: 359  MVEEQTRHPAWGSYAQRLLEPEGGLWRNPANGGHDDKAHPPIHPTKFSSGESNWSRDHLN 418

Query: 1664 VYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1485
            VYELVVRH+LACVSQPA+ AETTVEIDIA E+FSASGR I+AKNYL+VYRFE+WGGS+IP
Sbjct: 419  VYELVVRHYLACVSQPAVAAETTVEIDIAGERFSASGRAILAKNYLEVYRFESWGGSVIP 478

Query: 1484 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1305
             Y  GQQF PTTLTLDA VTRPPPLL EADLLSCMDKAGIGTDATMHDHIKKLLDR YAT
Sbjct: 479  VYEKGQQFIPTTLTLDAAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYAT 538

Query: 1304 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1125
            KD++ RFSPT LGEALVMGYDDMGYELWKP LRA+ME DM  VS+G K KAEVLE CLQQ
Sbjct: 539  KDANTRFSPTNLGEALVMGYDDMGYELWKPNLRALMEHDMNEVSVGRKTKAEVLETCLQQ 598

Query: 1124 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 945
            MKACF+DAR+ K KL EAM +FFERSN ++ +E    GEVVR+C LC ESDM LRK  DG
Sbjct: 599  MKACFLDARVKKSKLLEAMTIFFERSNNTDESESQTAGEVVRRCNLCNESDMALRKNRDG 658

Query: 944  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 765
            NFMVGC+ +PQCRN VWLPG   EA VTTN+C +C PGPVY I FKFR++ IPP ++VNH
Sbjct: 659  NFMVGCMNYPQCRNAVWLPGPTLEASVTTNVCQSCGPGPVYKILFKFRQIGIPPGFDVNH 718

Query: 764  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 585
            LGC+GGCDDIL+QL+++CGTGSR+ +                           Q GH+S 
Sbjct: 719  LGCVGGCDDILKQLIDICGTGSRSQARRTPGTAPSNNIQGSNTRQSNVCIHCQQRGHAST 778

Query: 584  SYANAPESSRGRNSRSQEAG----ESSIPCSSCGAPCNLRTANTLANRGRKFYSCQAQGC 417
            +  +   +SR  NSR         ES++ C++CG+ C LRTANT ANRGR+F+SC  QGC
Sbjct: 779  NCPSRVPASR--NSRPTATNPRNDESTVSCNTCGSQCVLRTANTEANRGRQFFSCPTQGC 836

Query: 416  NFFVWEDN-----------ASSGGTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSFM 270
            +FF WED+           ++SGG+  RGS                           SF+
Sbjct: 837  SFFAWEDSINNSSGNATTGSNSGGSGRRGS------RGRGRGGRGGQSSGGRRGSGTSFV 890

Query: 269  SATGEPISG-RCFVCGDPGHFANACPNR 189
            SATGEP+SG RCF CGDP HFANACPNR
Sbjct: 891  SATGEPVSGIRCFSCGDPSHFANACPNR 918


>ref|XP_006581778.1| PREDICTED: DNA topoisomerase 3-alpha isoform X4 [Glycine max]
          Length = 885

 Score =  731 bits (1888), Expect = 0.0
 Identities = 373/568 (65%), Positives = 422/568 (74%), Gaps = 14/568 (2%)
 Frame = -1

Query: 1847 TIVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHH 1668
            TIVQEQQGHP WG YAQRL+DPEA LWRNP GGGHDDKAHPPI+PTKFS GESGWS DH 
Sbjct: 323  TIVQEQQGHPEWGIYAQRLMDPEAGLWRNPRGGGHDDKAHPPIYPTKFSTGESGWSQDHR 382

Query: 1667 KVYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMI 1488
            K+YELVVRHFLACVS+PA+GAETTVEI+IA E FSA GRVI+ KNYLDVYR+E+WGGSMI
Sbjct: 383  KLYELVVRHFLACVSKPALGAETTVEINIAGELFSACGRVILEKNYLDVYRYESWGGSMI 442

Query: 1487 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDK--AGIGTDATMHDHIKKLLDRF 1314
            PTY  GQQF PT LTL++GVTRPPPLLSEADLLS MD+  A IGTDATM DHIKK+LDR 
Sbjct: 443  PTYTNGQQFNPTKLTLESGVTRPPPLLSEADLLSYMDREEAKIGTDATMQDHIKKMLDRS 502

Query: 1313 YATKDSSMRFSPTKLGEALVMGYDD--MGYELWKPYLRAMMESDMKAVSMGTKRKAEVLE 1140
            YATKDSS RF+PT LGEALV+GYDD  M Y+LWKP LR+ ME  M  V  G K KAEVL 
Sbjct: 503  YATKDSSTRFTPTNLGEALVLGYDDIDMTYKLWKPDLRSEMEKKMDDVKKGDKSKAEVLV 562

Query: 1139 ACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLR 960
              LQ+M+ACF++ARLNK KL EAMA+FFERS RS+S+E HA GEVVR+CGLCQESDM+LR
Sbjct: 563  TILQKMEACFLEARLNKVKLLEAMAIFFERSTRSSSDELHATGEVVRRCGLCQESDMLLR 622

Query: 959  KKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPN 780
            K  DGNFMVGC+G+PQCRN VWLPGSVSEA+VTTN C+ C+PGPVYLIQFKFRRLEIPPN
Sbjct: 623  KNRDGNFMVGCMGYPQCRNAVWLPGSVSEAVVTTNTCNFCTPGPVYLIQFKFRRLEIPPN 682

Query: 779  YNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQT 600
            Y+ NHLGCIGGCD+IL QL E+CG G R  +                           +T
Sbjct: 683  YSPNHLGCIGGCDEILAQLTEICGRGPRMPARPRGPTAPTSNAHHTNPRQGACMNCR-ET 741

Query: 599  GHSSGS----YANAPESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANTLANRGRKFYSC 432
            GHSS      Y N        +  S+  GE+S+ CSSCG PC LRTANT+ NRGRKFYSC
Sbjct: 742  GHSSTDCPLRYGNVQ-----HHGTSEHNGEASVSCSSCGTPCVLRTANTVNNRGRKFYSC 796

Query: 431  QAQGCNFFVWED--NASSGG-TVPRGSI--XXXXXXXXXXXXXXXXXXXXXXXXXXSFMS 267
            Q+Q CNFFVWED  NA +GG +V R +                             +FMS
Sbjct: 797  QSQECNFFVWEDSLNAGTGGRSVTRSNSIPALNPRQTGGRGSRGRGGQYGSRTANTTFMS 856

Query: 266  ATGEPISG-RCFVCGDPGHFANACPNRG 186
            ATG+PISG RC+ CGDP HFAN CP+RG
Sbjct: 857  ATGDPISGRRCYTCGDPSHFANVCPHRG 884


>ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Glycine max]
            gi|571460704|ref|XP_006581776.1| PREDICTED: DNA
            topoisomerase 3-alpha isoform X2 [Glycine max]
          Length = 913

 Score =  731 bits (1888), Expect = 0.0
 Identities = 373/568 (65%), Positives = 422/568 (74%), Gaps = 14/568 (2%)
 Frame = -1

Query: 1847 TIVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHH 1668
            TIVQEQQGHP WG YAQRL+DPEA LWRNP GGGHDDKAHPPI+PTKFS GESGWS DH 
Sbjct: 351  TIVQEQQGHPEWGIYAQRLMDPEAGLWRNPRGGGHDDKAHPPIYPTKFSTGESGWSQDHR 410

Query: 1667 KVYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMI 1488
            K+YELVVRHFLACVS+PA+GAETTVEI+IA E FSA GRVI+ KNYLDVYR+E+WGGSMI
Sbjct: 411  KLYELVVRHFLACVSKPALGAETTVEINIAGELFSACGRVILEKNYLDVYRYESWGGSMI 470

Query: 1487 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDK--AGIGTDATMHDHIKKLLDRF 1314
            PTY  GQQF PT LTL++GVTRPPPLLSEADLLS MD+  A IGTDATM DHIKK+LDR 
Sbjct: 471  PTYTNGQQFNPTKLTLESGVTRPPPLLSEADLLSYMDREEAKIGTDATMQDHIKKMLDRS 530

Query: 1313 YATKDSSMRFSPTKLGEALVMGYDD--MGYELWKPYLRAMMESDMKAVSMGTKRKAEVLE 1140
            YATKDSS RF+PT LGEALV+GYDD  M Y+LWKP LR+ ME  M  V  G K KAEVL 
Sbjct: 531  YATKDSSTRFTPTNLGEALVLGYDDIDMTYKLWKPDLRSEMEKKMDDVKKGDKSKAEVLV 590

Query: 1139 ACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLR 960
              LQ+M+ACF++ARLNK KL EAMA+FFERS RS+S+E HA GEVVR+CGLCQESDM+LR
Sbjct: 591  TILQKMEACFLEARLNKVKLLEAMAIFFERSTRSSSDELHATGEVVRRCGLCQESDMLLR 650

Query: 959  KKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPN 780
            K  DGNFMVGC+G+PQCRN VWLPGSVSEA+VTTN C+ C+PGPVYLIQFKFRRLEIPPN
Sbjct: 651  KNRDGNFMVGCMGYPQCRNAVWLPGSVSEAVVTTNTCNFCTPGPVYLIQFKFRRLEIPPN 710

Query: 779  YNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQT 600
            Y+ NHLGCIGGCD+IL QL E+CG G R  +                           +T
Sbjct: 711  YSPNHLGCIGGCDEILAQLTEICGRGPRMPARPRGPTAPTSNAHHTNPRQGACMNCR-ET 769

Query: 599  GHSSGS----YANAPESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANTLANRGRKFYSC 432
            GHSS      Y N        +  S+  GE+S+ CSSCG PC LRTANT+ NRGRKFYSC
Sbjct: 770  GHSSTDCPLRYGNVQ-----HHGTSEHNGEASVSCSSCGTPCVLRTANTVNNRGRKFYSC 824

Query: 431  QAQGCNFFVWED--NASSGG-TVPRGSI--XXXXXXXXXXXXXXXXXXXXXXXXXXSFMS 267
            Q+Q CNFFVWED  NA +GG +V R +                             +FMS
Sbjct: 825  QSQECNFFVWEDSLNAGTGGRSVTRSNSIPALNPRQTGGRGSRGRGGQYGSRTANTTFMS 884

Query: 266  ATGEPISG-RCFVCGDPGHFANACPNRG 186
            ATG+PISG RC+ CGDP HFAN CP+RG
Sbjct: 885  ATGDPISGRRCYTCGDPSHFANVCPHRG 912


>ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arabidopsis lyrata subsp.
            lyrata] gi|297310711|gb|EFH41135.1| hypothetical protein
            ARALYDRAFT_496584 [Arabidopsis lyrata subsp. lyrata]
          Length = 923

 Score =  730 bits (1885), Expect = 0.0
 Identities = 358/560 (63%), Positives = 409/560 (73%), Gaps = 8/560 (1%)
 Frame = -1

Query: 1844 IVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1665
            +V+EQ+ HP WGSYAQRLL+PE  LWRNP  GGHDDKAHPPIHPTKFS+GES WS DH  
Sbjct: 359  MVEEQRRHPAWGSYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPTKFSSGESNWSRDHLN 418

Query: 1664 VYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1485
            VYELVVRH+LACVSQPA  AETTVEIDIA E+FSASGR I+AKNYL+VYRFE+WGGS+IP
Sbjct: 419  VYELVVRHYLACVSQPAKAAETTVEIDIAGERFSASGRAILAKNYLEVYRFESWGGSVIP 478

Query: 1484 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1305
             Y  GQQF PTTLTLD+ VTRPPPLL EADLLSCMDKAGIGTDATMHDHIKKLLDR YAT
Sbjct: 479  VYEKGQQFIPTTLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYAT 538

Query: 1304 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1125
            KD++ RFSPT LGEALVMGYDDMGYELWKP LRA+ME DM  VS+G K KAEVLE CLQQ
Sbjct: 539  KDANTRFSPTNLGEALVMGYDDMGYELWKPNLRALMERDMNEVSVGRKTKAEVLETCLQQ 598

Query: 1124 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 945
            MKACF+DAR+ K KL EAM +FFERSN ++ +E    GEV+R+C LC ESDM LRK  DG
Sbjct: 599  MKACFLDARVKKSKLLEAMTIFFERSNNTDESESQTAGEVIRRCNLCNESDMALRKNRDG 658

Query: 944  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 765
            NFMVGC+ +PQCRN VWLPG   EA VTT++C TC PGPVY I FKFR++ IPP ++VNH
Sbjct: 659  NFMVGCMNYPQCRNAVWLPGPTLEASVTTDVCQTCGPGPVYKILFKFRQIGIPPGFDVNH 718

Query: 764  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 585
            LGCIGGCDDIL+QL+++CGTGSR+ +                           Q GH+S 
Sbjct: 719  LGCIGGCDDILKQLIDICGTGSRSQARRAPGTVPSNNIQGSNTRQGNFCIHCQQRGHAS- 777

Query: 584  SYANAPESSRG-RNSR----SQEAGESSIPCSSCGAPCNLRTANTLANRGRKFYSCQAQG 420
              AN P  +   RNSR    +    ES++ C++CG  C LRTANT ANRGR+F+SC  QG
Sbjct: 778  --ANCPSRATAFRNSRLTATNPRNDESTVSCNTCGTQCVLRTANTEANRGRQFFSCPTQG 835

Query: 419  CNFFVWED--NASSGGTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSFMSATGEPIS 246
            C+FF WED  N SSG      +                           SF+SATGEP+S
Sbjct: 836  CSFFAWEDSINNSSGNATTGSNSGGSGRRGRGRGGRGGQSGGGRRNSGTSFVSATGEPVS 895

Query: 245  G-RCFVCGDPGHFANACPNR 189
            G RCF CGDP HFAN CPNR
Sbjct: 896  GIRCFSCGDPSHFANVCPNR 915


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223533243|gb|EEF34998.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 833

 Score =  730 bits (1885), Expect = 0.0
 Identities = 348/482 (72%), Positives = 395/482 (81%), Gaps = 2/482 (0%)
 Frame = -1

Query: 1847 TIVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHH 1668
            TIV++QQ HP+WGSYAQRLLDP   LWRNPS GGHDDKAHPPIHPTKFS GE+GWS DHH
Sbjct: 353  TIVRDQQAHPIWGSYAQRLLDPGTGLWRNPSTGGHDDKAHPPIHPTKFSPGETGWSQDHH 412

Query: 1667 KVYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMI 1488
            +VYELVVRHFLACVSQPA+GAETTVEIDIA EQFSASGRVI+AKNYLDVYRFE+WGGSMI
Sbjct: 413  RVYELVVRHFLACVSQPAVGAETTVEIDIAGEQFSASGRVILAKNYLDVYRFESWGGSMI 472

Query: 1487 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYA 1308
            PTY +GQQF PTTLTLD+GVTRPPPLLSE+DLLSCMDKAGIGTDATMHDHIKKLLDRFYA
Sbjct: 473  PTYVHGQQFMPTTLTLDSGVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDRFYA 532

Query: 1307 TKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQ 1128
            TKD++ RFSPT LGEALVMGYDDMGYELWKP LR+MME DMK VSMG K KAEVLE CLQ
Sbjct: 533  TKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRSMMEYDMKEVSMGHKSKAEVLETCLQ 592

Query: 1127 QMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPD 948
            QMK CF+DAR+NK KL EAMAVFFERS+RS+ N+ HA  ++VR+CGLC+E++MVLR+  D
Sbjct: 593  QMKTCFLDARINKVKLLEAMAVFFERSDRSSGNDNHATVDIVRQCGLCRETNMVLRRNRD 652

Query: 947  GNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVN 768
            GNFMVGC+G+PQCRN +WLPG + EA VTT++C+ C+PGPVYLIQFKFR+LEIPP ++VN
Sbjct: 653  GNFMVGCMGYPQCRNAIWLPGPIIEATVTTSVCNYCTPGPVYLIQFKFRQLEIPPGFSVN 712

Query: 767  HLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSS 588
            HLGCIGGCDD LRQL ++CGTGSR  +                           QTGH+S
Sbjct: 713  HLGCIGGCDDTLRQLTDICGTGSRVQARARAPNTTPSNSQQSNTRFATCVHCH-QTGHAS 771

Query: 587  GSYANAPESSRGRNSR--SQEAGESSIPCSSCGAPCNLRTANTLANRGRKFYSCQAQGCN 414
                     SR   SR  +++ GESS+ C +CG PC LRTANT  NRGRKFYSC +Q CN
Sbjct: 772  IDCPLQLSGSRRVQSRGTNEQMGESSVTCGTCGTPCALRTANTANNRGRKFYSCPSQSCN 831

Query: 413  FF 408
            FF
Sbjct: 832  FF 833


>ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [Oryza brachyantha]
          Length = 923

 Score =  726 bits (1873), Expect = 0.0
 Identities = 355/570 (62%), Positives = 417/570 (73%), Gaps = 15/570 (2%)
 Frame = -1

Query: 1847 TIVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHH 1668
            +IVQEQ  HPVWG+YAQRLLDPEA LWRNPS GGHDDKAHPPIHPTKFSAGE+ WS +H 
Sbjct: 360  SIVQEQTAHPVWGTYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGETNWSDNHK 419

Query: 1667 KVYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMI 1488
            K+YELVVRHFLAC SQPA+GAETTVEIDIA EQF+ASGRV+++KNYLDVYRF++WGG+++
Sbjct: 420  KLYELVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVVLSKNYLDVYRFDSWGGTLL 479

Query: 1487 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYA 1308
            PTY  GQQF PTTLTLD+GVTRPPPLL+EADLLSCMDKAGIGTDATMHDHIKKLLDR YA
Sbjct: 480  PTYTIGQQFIPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHDHIKKLLDRCYA 539

Query: 1307 TKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQ 1128
            TKD++ RFSPT LGEALVMGYD+MGYELWKPYLR+MME+DMK+VS+GTK KAEVLE CLQ
Sbjct: 540  TKDANTRFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSIGTKSKAEVLENCLQ 599

Query: 1127 QMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPD 948
            QMKACF+DAR NK KLF+AM  FF RS+R  +  Q++I E VR C  C ES+MVL+++P 
Sbjct: 600  QMKACFLDARANKVKLFDAMGAFFARSSRPINETQNSI-EAVRPCAACNESEMVLKRRPT 658

Query: 947  GNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVN 768
            G FMVGC GFPQCRNVVWLPGS+SEA VT  +C TC+PGPVY IQFKFRR +IPP+++V+
Sbjct: 659  GEFMVGCRGFPQCRNVVWLPGSLSEASVTDQVCPTCAPGPVYKIQFKFRRRDIPPSFDVD 718

Query: 767  HLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQ----- 603
            HLGCIGGCDDIL++L E+   GS N ++                         ++     
Sbjct: 719  HLGCIGGCDDILKELTEISRFGSHNQTATPARNQSQNPSGARQGAPRQDLHTDFRPARQF 778

Query: 602  -TGHSSGSYANAPESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANTLANRGRKFYSCQA 426
              GH+       P+  R  ++ S       + C+SCG PC LRTANT ANRGRKFY CQ 
Sbjct: 779  TNGHTP---VVNPQGFRSTHTGSSGNASGQVQCTSCGEPCILRTANTEANRGRKFYKCQD 835

Query: 425  QGCNFFVWEDNASSGGTVPRG---------SIXXXXXXXXXXXXXXXXXXXXXXXXXXSF 273
              C FF WED+  +  +VPRG                                      F
Sbjct: 836  PACGFFAWEDDVQN--SVPRGRGRGGRSGSRQASASAGRRGGSQARGRRGRGRNADGMMF 893

Query: 272  MSATGEPISGRCFVCGDPGHFANACPNRGR 183
            ++ATGEP+ G CFVCGDP HFANACP+RGR
Sbjct: 894  VAATGEPVHGSCFVCGDPTHFANACPSRGR 923


>ref|XP_006581777.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Glycine max]
          Length = 910

 Score =  723 bits (1865), Expect = 0.0
 Identities = 371/568 (65%), Positives = 420/568 (73%), Gaps = 14/568 (2%)
 Frame = -1

Query: 1847 TIVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHH 1668
            TIVQEQQGHP WG YAQRL+DPEA LWRNP GGGHDDKAHPPI+PTKFS GESGWS DH 
Sbjct: 351  TIVQEQQGHPEWGIYAQRLMDPEAGLWRNPRGGGHDDKAHPPIYPTKFSTGESGWSQDHR 410

Query: 1667 KVYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMI 1488
            K+YELVVRHFLACVS+PA+GAETTVEI+IA E FSA GRVI+ KNYLDVYR+E+WGGSMI
Sbjct: 411  KLYELVVRHFLACVSKPALGAETTVEINIAGELFSACGRVILEKNYLDVYRYESWGGSMI 470

Query: 1487 PTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDK--AGIGTDATMHDHIKKLLDRF 1314
            PTY  GQQF PT LTL++GVTRPPPLLSEADLLS MD+  A IGTDATM DHIKK+LDR 
Sbjct: 471  PTYTNGQQFNPTKLTLESGVTRPPPLLSEADLLSYMDREEAKIGTDATMQDHIKKMLDRS 530

Query: 1313 YATKDSSMRFSPTKLGEALVMGYD--DMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLE 1140
            YATKDSS RF+PT LGEALV+GYD  DM Y+LWKP LR+ ME  M  V  G K KAEVL 
Sbjct: 531  YATKDSSTRFTPTNLGEALVLGYDDIDMTYKLWKPDLRSEMEKKMDDVKKGDKSKAEVLV 590

Query: 1139 ACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLR 960
              LQ+M+ACF++ARLNK KL EAMA+FFE   RS+S+E HA GEVVR+CGLCQESDM+LR
Sbjct: 591  TILQKMEACFLEARLNKVKLLEAMAIFFE---RSSSDELHATGEVVRRCGLCQESDMLLR 647

Query: 959  KKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPN 780
            K  DGNFMVGC+G+PQCRN VWLPGSVSEA+VTTN C+ C+PGPVYLIQFKFRRLEIPPN
Sbjct: 648  KNRDGNFMVGCMGYPQCRNAVWLPGSVSEAVVTTNTCNFCTPGPVYLIQFKFRRLEIPPN 707

Query: 779  YNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQT 600
            Y+ NHLGCIGGCD+IL QL E+CG G R  +                           +T
Sbjct: 708  YSPNHLGCIGGCDEILAQLTEICGRGPRMPARPRGPTAPTSNAHHTNPRQGACMNCR-ET 766

Query: 599  GHSSGS----YANAPESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANTLANRGRKFYSC 432
            GHSS      Y N        +  S+  GE+S+ CSSCG PC LRTANT+ NRGRKFYSC
Sbjct: 767  GHSSTDCPLRYGNVQ-----HHGTSEHNGEASVSCSSCGTPCVLRTANTVNNRGRKFYSC 821

Query: 431  QAQGCNFFVWED--NASSGG-TVPRGSI--XXXXXXXXXXXXXXXXXXXXXXXXXXSFMS 267
            Q+Q CNFFVWED  NA +GG +V R +                             +FMS
Sbjct: 822  QSQECNFFVWEDSLNAGTGGRSVTRSNSIPALNPRQTGGRGSRGRGGQYGSRTANTTFMS 881

Query: 266  ATGEPISG-RCFVCGDPGHFANACPNRG 186
            ATG+PISG RC+ CGDP HFAN CP+RG
Sbjct: 882  ATGDPISGRRCYTCGDPSHFANVCPHRG 909


>ref|XP_006279975.1| hypothetical protein CARUB_v10025845mg [Capsella rubella]
            gi|482548679|gb|EOA12873.1| hypothetical protein
            CARUB_v10025845mg [Capsella rubella]
          Length = 919

 Score =  722 bits (1864), Expect = 0.0
 Identities = 357/569 (62%), Positives = 410/569 (72%), Gaps = 17/569 (2%)
 Frame = -1

Query: 1844 IVQEQQGHPVWGSYAQRLLDPEASLWRNPSGGGHDDKAHPPIHPTKFSAGESGWSPDHHK 1665
            +V+EQ  HP WG+YAQRLL+PE  LWRNP  GGHDDKAHPPIHPTKFS+GES WS DH  
Sbjct: 359  MVEEQTRHPEWGAYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPTKFSSGESNWSRDHLN 418

Query: 1664 VYELVVRHFLACVSQPAIGAETTVEIDIACEQFSASGRVIIAKNYLDVYRFETWGGSMIP 1485
            VYELVVRH+LACVSQPA+ AETTVEIDI+ E+FSASGR I+AKNYL+VYRFE+WGGS+IP
Sbjct: 419  VYELVVRHYLACVSQPAVAAETTVEIDISGERFSASGRAILAKNYLEVYRFESWGGSVIP 478

Query: 1484 TYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAT 1305
             Y  GQQF PT+LTLD+ VTRPPPLL EADLLSCMDKAGIGTDATMHDHIKKLLDR YAT
Sbjct: 479  VYEKGQQFIPTSLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYAT 538

Query: 1304 KDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQ 1125
            KD++ RFSPT LGEALVMGYDDMGYELWKP LRA+ME DM  VS+G K KAEVLE CLQQ
Sbjct: 539  KDANTRFSPTNLGEALVMGYDDMGYELWKPNLRAIMEHDMNEVSVGRKTKAEVLETCLQQ 598

Query: 1124 MKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDG 945
            MKACF+DAR+ K KL EAM +FFERSN ++  E    GEVVR+C LC ESDM LRK  DG
Sbjct: 599  MKACFLDARVKKSKLLEAMTIFFERSNNTDEGENQTAGEVVRRCNLCNESDMALRKNRDG 658

Query: 944  NFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNH 765
            NFMVGC+ +PQCRN VWLPG   EA VTTN+C +C PGPVY I FKFR++ IPP + VNH
Sbjct: 659  NFMVGCMNYPQCRNAVWLPGPTLEASVTTNVCQSCGPGPVYKILFKFRQIGIPPGFEVNH 718

Query: 764  LGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXAWQTGHSSG 585
            LGC+GGCD IL+QL+++CGTGSR+ +                           Q GH+S 
Sbjct: 719  LGCVGGCDGILKQLIDICGTGSRSQARRAPDTVPPNNIRGSNTRQSNVCIHCQQRGHAS- 777

Query: 584  SYANAPES-SRGRNSR----SQEAGESSIPCSSCGAPCNLRTANTLANRGRKFYSCQAQG 420
              +N P   S  RNSR    +    ES++ C++CG  C LRTANT ANRGR+F+SC  QG
Sbjct: 778  --SNCPSRVSASRNSRPTGTNPRNDESTVSCNTCGTQCVLRTANTEANRGRQFFSCPTQG 835

Query: 419  CNFFVWEDNAS-----------SGGTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXSF 273
            C+FF WED  S           SGG+  RG+                           SF
Sbjct: 836  CSFFAWEDGISNSSGNATTGSNSGGSGRRGN-------RGRGRGGRGGQSGGRRGSGTSF 888

Query: 272  MSATGEPISG-RCFVCGDPGHFANACPNR 189
            +SATGEP+SG RCF CGDP HFANACPNR
Sbjct: 889  VSATGEPVSGIRCFSCGDPSHFANACPNR 917