BLASTX nr result

ID: Rehmannia22_contig00026919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00026919
         (544 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY34667.1| Excinuclease ABC [Theobroma cacao]                      57   4e-06
ref|XP_002276725.2| PREDICTED: structure-specific endonuclease s...    57   4e-06
ref|XP_006361297.1| PREDICTED: uncharacterized protein LOC102597...    55   8e-06

>gb|EOY34667.1| Excinuclease ABC [Theobroma cacao]
          Length = 460

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 42/110 (38%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
 Frame = -2

Query: 435 SPVRTSFSFASSSYVIEEVQSPRLVELNAESDQPFKKQLTTALVANKDNQLIKS------ 274
           SPVRTS SF +S    E  +      +  E + P +KQ T  + AN+D Q  +       
Sbjct: 353 SPVRTSPSFVTSLSDGETAEGANTSII--EKECPSRKQFTAVVAANEDRQPGEKPLTTDV 410

Query: 273 --------RDIISHGVEIIDVFTPSPCHPVNSGSKKRRRSL-GPEIIDLT 151
                      ++H VE+ID+ TPSP   + S SKKRR S+  PEIIDLT
Sbjct: 411 AVMEDQLPSSTVAHEVEVIDLLTPSPACRLISDSKKRRISMFSPEIIDLT 460


>ref|XP_002276725.2| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
           2-like [Vitis vinifera]
          Length = 364

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 50/138 (36%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
 Frame = -2

Query: 543 VVEPSGFVANTRVGWPRKLPRISKTDLGPSYFMINDSPVRTSFSFASSSYVIEEVQSPRL 364
           VV  SG      +  P  L   +  D   S F + DSPVRTS      S+  E       
Sbjct: 236 VVHCSGKTQENAMRQPADLS--TSKDEHRSPFCLIDSPVRTS------SHSTEGTLDKDT 287

Query: 363 VELNAESDQPFKKQLTTALVANKDNQLIKSRDIISHGVEIIDVFTPSPCHPVNSGSKKRR 184
             L+ E+     KQL   + A++    I S D  S  +E+ID+ + SP +  N   KKRR
Sbjct: 288 SGLSKENKVLTMKQLPATVAADRGKPKISSLDT-SCEIEVIDLLSCSPDYRTNPCFKKRR 346

Query: 183 RS-LGPEIIDLTNSPLFV 133
            + + PEIIDLTNSP+FV
Sbjct: 347 ATTVHPEIIDLTNSPIFV 364


>ref|XP_006361297.1| PREDICTED: uncharacterized protein LOC102597488 [Solanum tuberosum]
          Length = 369

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
 Frame = -2

Query: 450 FMINDSPVRTSFSFASSSYVIEEVQSPRLVELNAESDQPFKKQLTTALVANKDNQLIKSR 271
           ++I DSPV  S S     + I + +     E +   D+  +KQ         D+ L    
Sbjct: 269 YIIIDSPVERSSSILGDFFHIADKK-----ERHELDDEFGEKQANKMCSTKTDDSLATKN 323

Query: 270 DIISHGVEIIDVFTPSPCHPVNSGSKKRRRSLG-PEIIDLTNSPLFV 133
             +   +E+IDVFTP PC  V +  K+RR S   PEIIDLT+SP++V
Sbjct: 324 AGLPSDIEVIDVFTP-PCSKVRADHKRRRFSASCPEIIDLTDSPIYV 369


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