BLASTX nr result

ID: Rehmannia22_contig00026789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00026789
         (438 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004238713.1| PREDICTED: protein NLRC3-like [Solanum lycop...    65   1e-08
ref|XP_006355934.1| PREDICTED: protein NLRC3-like [Solanum tuber...    64   3e-08
gb|ACV87735.1| chloroplast envelope protein 1 [Nicotiana bentham...    57   2e-06

>ref|XP_004238713.1| PREDICTED: protein NLRC3-like [Solanum lycopersicum]
          Length = 610

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
 Frame = +2

Query: 107 MVSTSTLSLCSHPTINFGFRNKHRTE--LWTISSSKNSKLYHIAPGVISPFTLVSINSRT 280
           M S+ST SLCSHPT+NF F  +        ++SSS +  L HI     SP ++ S   + 
Sbjct: 1   MGSSSTFSLCSHPTVNFEFNGRKVGYGLQKSLSSSSSYCLIHI-----SPISISSRRRKC 55

Query: 281 LQSKRFSIKAAAXXXXXXXXXXXXXXXXVYQQSQAQTPVAPVKEIASFVLPA 436
           +Q +R +++AA+                VY++SQAQTP  PV  I SFV+PA
Sbjct: 56  VQLRRVTVRAASSSSTGSRRSMSTRR--VYKESQAQTPALPVDRIVSFVVPA 105


>ref|XP_006355934.1| PREDICTED: protein NLRC3-like [Solanum tuberosum]
          Length = 609

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
 Frame = +2

Query: 107 MVSTSTLSLCSHPTINFGFRNKHRTE--LWTISSSKNSKLYHIAPGVISPFTLVSINSRT 280
           M S+ST SLCSHPT+NF F  +        ++SSS +  L HI+P        +S   + 
Sbjct: 1   MGSSSTFSLCSHPTVNFEFNGRKVGYGLQKSLSSSSSYCLIHISP------ICISSRRKC 54

Query: 281 LQSKRFSIKAAAXXXXXXXXXXXXXXXXVYQQSQAQTPVAPVKEIASFVLPA 436
           LQ +R  ++AA+                VY++SQAQTP  PV  I SFV+PA
Sbjct: 55  LQLRRVIVRAASSSSTGPRRSTNTRR--VYKESQAQTPALPVDRIVSFVVPA 104


>gb|ACV87735.1| chloroplast envelope protein 1 [Nicotiana benthamiana]
          Length = 614

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 47/118 (39%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
 Frame = +2

Query: 107 MVSTSTLSLCSHPTINFGFRNKHRTELW-----TISSSKNSKLYHIAPGVISP---FTLV 262
           M S STLSLCSH T+NF F   +R +L       ++SS +S  Y + P  ISP   F+  
Sbjct: 1   MGSASTLSLCSHSTVNFEF---YRRKLGFGRDQALNSSYSS--YVLLP--ISPSLYFSSS 53

Query: 263 SINSRTLQSKRFSIKAAAXXXXXXXXXXXXXXXXVYQQSQAQTPVAPVKEIASFVLPA 436
              S+ LQ KR  ++A++                VY++SQAQ P  PV +IASFV+PA
Sbjct: 54  CSRSKCLQLKRVIVRASSSSSTGSRRSSSSRR--VYKESQAQPPTLPVDQIASFVVPA 109


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