BLASTX nr result

ID: Rehmannia22_contig00026666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00026666
         (494 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB40749.1| starch branching enzyme II [Solanum tuberosum]         64   3e-08
ref|NP_001275467.1| 1,4-alpha-glucan-branching enzyme 2-2, chlor...    63   3e-08
emb|CAB40748.1| starch branching enzyme II [Solanum tuberosum]         61   1e-07
ref|XP_004246561.1| PREDICTED: 1,4-alpha-glucan-branching enzyme...    59   7e-07
emb|CAB40743.1| starch branching enzyme II [Solanum tuberosum]         59   7e-07

>emb|CAB40749.1| starch branching enzyme II [Solanum tuberosum]
          Length = 433

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 37/62 (59%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
 Frame = +1

Query: 304 MVYTLPGVRLPTVPSAYKLSSNGWSSHVDTRNAHLSFFVKNKSNSRKIFSGK-PYESGSQ 480
           MVYTL GVR PTVPS YK  SNG+SS+ D RNA++S F+K  S SRKI + K  Y+S S+
Sbjct: 1   MVYTLSGVRFPTVPSVYK--SNGFSSNGDRRNANVSVFLKKHSLSRKILAEKSSYDSESR 58

Query: 481 SS 486
            S
Sbjct: 59  PS 60


>ref|NP_001275467.1| 1,4-alpha-glucan-branching enzyme 2-2,
           chloroplastic/amyloplastic-like [Solanum tuberosum]
           gi|4584509|emb|CAB40746.1| starch branching enzyme II
           [Solanum tuberosum]
          Length = 878

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 37/62 (59%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
 Frame = +1

Query: 304 MVYTLPGVRLPTVPSAYKLSSNGWSSHVDTRNAHLSFFVKNKSNSRKIFSGK-PYESGSQ 480
           MVYTL GVR PTVPS YK  SNG+SS+ D RNA++S F+K  S SRKI + K  Y S S+
Sbjct: 1   MVYTLSGVRFPTVPSVYK--SNGFSSNGDRRNANISVFLKKHSLSRKILAEKSSYNSESR 58

Query: 481 SS 486
            S
Sbjct: 59  PS 60


>emb|CAB40748.1| starch branching enzyme II [Solanum tuberosum]
          Length = 882

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/52 (63%), Positives = 39/52 (75%)
 Frame = +1

Query: 304 MVYTLPGVRLPTVPSAYKLSSNGWSSHVDTRNAHLSFFVKNKSNSRKIFSGK 459
           MVYTL GVR PTVPS YK  SNG+SS+ D RNA++S F+K  S SRKI + K
Sbjct: 1   MVYTLSGVRFPTVPSVYK--SNGFSSNGDRRNANVSVFLKKHSLSRKILAEK 50


>ref|XP_004246561.1| PREDICTED: 1,4-alpha-glucan-branching enzyme 2-2,
           chloroplastic/amyloplastic-like [Solanum lycopersicum]
          Length = 876

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 37/63 (58%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
 Frame = +1

Query: 304 MVYTLPGVRLPTVPSAYKLSSNGW-SSHVDTRNAHLSFFVKNKSNSRKIFSGK-PYESGS 477
           MVYTL GVR PTVPS YK  SNG+ SS+ D RNA++S F+K  S SRKI + K  Y+S S
Sbjct: 1   MVYTLSGVRFPTVPSVYK--SNGFTSSNGDRRNANVSVFLKKHSLSRKILAEKSSYDSES 58

Query: 478 QSS 486
           + S
Sbjct: 59  RPS 61


>emb|CAB40743.1| starch branching enzyme II [Solanum tuberosum]
          Length = 871

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/52 (61%), Positives = 38/52 (73%)
 Frame = +1

Query: 304 MVYTLPGVRLPTVPSAYKLSSNGWSSHVDTRNAHLSFFVKNKSNSRKIFSGK 459
           MVY L GVR PTVPS YK  SNG+SS+ D RNA++S F+K  S SRKI + K
Sbjct: 1   MVYILSGVRFPTVPSVYK--SNGFSSNGDRRNANVSVFLKKHSLSRKILAEK 50


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