BLASTX nr result
ID: Rehmannia22_contig00026390
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00026390
(625 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004249090.1| PREDICTED: pre-mRNA-splicing factor ATP-depe... 131 1e-28
ref|XP_006364743.1| PREDICTED: pre-mRNA-splicing factor ATP-depe... 130 2e-28
ref|XP_004310060.1| PREDICTED: pre-mRNA-splicing factor ATP-depe... 119 7e-25
ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-depe... 117 3e-24
gb|EXC06141.1| Pre-mRNA-splicing factor ATP-dependent RNA helica... 116 6e-24
ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinu... 104 2e-20
ref|XP_003597474.1| Pre-mRNA-splicing factor ATP-dependent RNA h... 104 2e-20
gb|EOY13966.1| Pre-mRNA-splicing factor ATP-dependent RNA helica... 103 4e-20
ref|XP_004487236.1| PREDICTED: pre-mRNA-splicing factor ATP-depe... 101 2e-19
gb|ESW22392.1| hypothetical protein PHAVU_005G150000g [Phaseolus... 100 3e-19
ref|XP_006595050.1| PREDICTED: pre-mRNA-splicing factor ATP-depe... 97 3e-18
ref|XP_003547002.1| PREDICTED: pre-mRNA-splicing factor ATP-depe... 97 3e-18
ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-depe... 97 3e-18
ref|XP_002316148.2| hypothetical protein POPTR_0010s17940g [Popu... 97 4e-18
ref|XP_006484342.1| PREDICTED: mRNA cap guanine-N7 methyltransfe... 88 2e-15
ref|XP_006484072.1| PREDICTED: pre-mRNA-splicing factor ATP-depe... 88 2e-15
ref|XP_006438067.1| hypothetical protein CICLE_v100305311mg, par... 88 2e-15
ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-depe... 85 1e-14
ref|NP_196805.2| RNA helicase family protein [Arabidopsis thalia... 84 4e-14
emb|CAB88265.1| pre-mRNA splicing factor ATP-dependent RNA helic... 84 4e-14
>ref|XP_004249090.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16-like [Solanum lycopersicum]
Length = 1285
Score = 131 bits (330), Expect = 1e-28
Identities = 70/121 (57%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
Frame = +1
Query: 262 GDSGPFDPNKSTDTLEPEDSSIGGLLVPEKDRVVFRP-QRKSILGLDALANAKRLESKVD 438
GD+GP D +K+T TLEP+ +S GGL VP K+RVVF+P +RKS+LGLDALA AKR + V+
Sbjct: 4 GDAGPIDLDKTTTTLEPDKTSSGGLFVPGKERVVFKPSERKSLLGLDALAIAKRGGATVE 63
Query: 439 GSFKVPKERVSSVAASLGEDEEKSSSSGIDEVEDGTSNSVRSFTNRRYRELASTKTSNSG 618
FKVP+ER++S+A+SL EDEE S+ SGIDE+ SN R+ RRYRE +++TS SG
Sbjct: 64 SEFKVPRERLASIASSLDEDEESSAVSGIDELGHTASNVSRNNVRRRYRESYASETSASG 123
Query: 619 S 621
S
Sbjct: 124 S 124
>ref|XP_006364743.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16-like [Solanum tuberosum]
Length = 1285
Score = 130 bits (328), Expect = 2e-28
Identities = 70/121 (57%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
Frame = +1
Query: 262 GDSGPFDPNKSTDTLEPEDSSIGGLLVPEKDRVVFRP-QRKSILGLDALANAKRLESKVD 438
GD+GP D +K+T TLEP+ +S GGL VP K+RVVF+P +RKS+LGLDALA AKR + V+
Sbjct: 4 GDAGPIDLDKTTTTLEPDKTSSGGLFVPGKERVVFKPSERKSLLGLDALAIAKRGGATVE 63
Query: 439 GSFKVPKERVSSVAASLGEDEEKSSSSGIDEVEDGTSNSVRSFTNRRYRELASTKTSNSG 618
FKVP+ER++S A+SL EDEE S++SGIDE+ SN R+ RRYRE +++TS SG
Sbjct: 64 SEFKVPRERLASFASSLDEDEESSAASGIDELGHTASNVSRNNVQRRYRESYASETSVSG 123
Query: 619 S 621
S
Sbjct: 124 S 124
>ref|XP_004310060.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16-like [Fragaria vesca subsp. vesca]
Length = 1307
Score = 119 bits (298), Expect = 7e-25
Identities = 66/121 (54%), Positives = 83/121 (68%), Gaps = 1/121 (0%)
Frame = +1
Query: 262 GDSGPFDPNKSTDTLEPEDSSIGGLLVPEKDRVVFRP-QRKSILGLDALANAKRLESKVD 438
G++ +K+T TLEPE SS GGL VP KDRVV+RP +RKS+LGLD LA AKR ESK +
Sbjct: 5 GNTEAIKLDKTTATLEPEKSSGGGLFVPGKDRVVYRPPERKSLLGLDVLAIAKREESKAE 64
Query: 439 GSFKVPKERVSSVAASLGEDEEKSSSSGIDEVEDGTSNSVRSFTNRRYRELASTKTSNSG 618
G FK PK+RV+SV ASL E+E S S ID+ D S VRS + RRYR +++ T +
Sbjct: 65 GGFKAPKDRVTSVVASLEEEENNSESGIIDDTGDDISTGVRSHSKRRYRGISANDTPRTE 124
Query: 619 S 621
S
Sbjct: 125 S 125
>ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16-like [Vitis vinifera]
Length = 1289
Score = 117 bits (293), Expect = 3e-24
Identities = 65/117 (55%), Positives = 86/117 (73%), Gaps = 1/117 (0%)
Frame = +1
Query: 265 DSGPFDPNKSTDTLEPEDSSIGGLLVPEKDRVVFRP-QRKSILGLDALANAKRLESKVDG 441
D+GP D +++T T EP+ GGL VP KDRVVFRP QRKS+LGLD LA+AKR SK DG
Sbjct: 7 DAGPIDLDQATVTFEPDQGGGGGLHVPGKDRVVFRPPQRKSLLGLDVLADAKRGGSKADG 66
Query: 442 SFKVPKERVSSVAASLGEDEEKSSSSGIDEVEDGTSNSVRSFTNRRYRELASTKTSN 612
+FKVP+E+ +SV AS+ ++EE S SSGIDE + VR+ + RRYRE A+++ S+
Sbjct: 67 AFKVPREKGASVVASM-DEEESSLSSGIDEEISTVISGVRNGSGRRYRETAASEASH 122
>gb|EXC06141.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase [Morus
notabilis]
Length = 1302
Score = 116 bits (290), Expect = 6e-24
Identities = 67/121 (55%), Positives = 85/121 (70%), Gaps = 1/121 (0%)
Frame = +1
Query: 247 MSHGNGDSGPFDPNKSTDTLEPEDSSIGGLLVPEKDRVVFRP-QRKSILGLDALANAKRL 423
M G + D +K+T TLE E SS GGL +P KDRVVF+P +RKSILGLD LANAKR
Sbjct: 1 MEKKQGIAETIDLDKTTVTLEAEKSSNGGLYLPGKDRVVFKPPERKSILGLDVLANAKRG 60
Query: 424 ESKVDGSFKVPKERVSSVAASLGEDEEKSSSSGIDEVEDGTSNSVRSFTNRRYRELASTK 603
ESKVDG FKVP++RVSS+ AS+ E+EE + S+ DE T + R+ +RRYRE+A +
Sbjct: 61 ESKVDGGFKVPRDRVSSLVASM-EEEENNGSTVTDETGSNTFSGKRNPASRRYREVAMDE 119
Query: 604 T 606
T
Sbjct: 120 T 120
>ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223533556|gb|EEF35296.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 1269
Score = 104 bits (260), Expect = 2e-20
Identities = 68/111 (61%), Positives = 78/111 (70%), Gaps = 5/111 (4%)
Frame = +1
Query: 304 LEPEDSSIGG--LLVPEKDRVVFRP-QRKSILGLDALANAKRLESKVDGSFKVPKERVSS 474
+EPE S GG L VP KDRV F+P QRKS+LGLDALANAKR S +G FKVPKERV+S
Sbjct: 1 MEPEKSEGGGGLLFVPGKDRVEFKPPQRKSLLGLDALANAKRSGSDTNGVFKVPKERVTS 60
Query: 475 VAASLGEDEEKSSSSGIDEVEDGT-SNSVRS-FTNRRYRELASTKTSNSGS 621
VAAS+ E E SSSGIDEV G+ SN S NRRYRE ++ TS+ S
Sbjct: 61 VAASIDEG-ELDSSSGIDEVGGGSASNGTHSNHVNRRYRETSARDTSHGES 110
>ref|XP_003597474.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
truncatula] gi|355486522|gb|AES67725.1|
Pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16 [Medicago truncatula]
Length = 1269
Score = 104 bits (259), Expect = 2e-20
Identities = 66/115 (57%), Positives = 80/115 (69%), Gaps = 1/115 (0%)
Frame = +1
Query: 280 DPNKSTDTLEPEDSSIGGLLVPEKDRVVF-RPQRKSILGLDALANAKRLESKVDGSFKVP 456
D NK+T TLEPE S+ GGL VP KDRVV+ P+RKS LGLD LA AKR ES+ DG+FKVP
Sbjct: 12 DINKTTTTLEPEKSTGGGLYVPGKDRVVYVAPERKSRLGLDTLAIAKRGESQSDGAFKVP 71
Query: 457 KERVSSVAASLGEDEEKSSSSGIDEVEDGTSNSVRSFTNRRYRELASTKTSNSGS 621
KE +S+AA+ EDE+KS SS D VE+ R +RRYRE S +TS + S
Sbjct: 72 KEITTSIAAA-AEDEDKSESS--DVVEESGQAGTRRNAHRRYRETTS-ETSRAES 122
>gb|EOY13966.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform 1
[Theobroma cacao] gi|508722070|gb|EOY13967.1|
Pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16 isoform 1 [Theobroma cacao]
Length = 1279
Score = 103 bits (257), Expect = 4e-20
Identities = 57/117 (48%), Positives = 83/117 (70%), Gaps = 2/117 (1%)
Frame = +1
Query: 277 FDPNKSTDTLEPEDSS-IGGLLVP-EKDRVVFRPQRKSILGLDALANAKRLESKVDGSFK 450
FD NK+ +TLEPE S+ GGL VP ++ + V +KS+LGLD AN KR +SKVD FK
Sbjct: 4 FDVNKTMETLEPEVSNGRGGLFVPKDRPKYVAPIGKKSVLGLDVRANEKRGDSKVDDGFK 63
Query: 451 VPKERVSSVAASLGEDEEKSSSSGIDEVEDGTSNSVRSFTNRRYRELASTKTSNSGS 621
VP+E ++S+AAS+ ED E++ S G++E + +N RS T+RRYR+ A++ T+N+ S
Sbjct: 64 VPRENIASIAASIDED-ERAESFGVEETKSTVTNGTRSHTSRRYRDKAASATTNAES 119
>ref|XP_004487236.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16-like [Cicer arietinum]
Length = 1254
Score = 101 bits (251), Expect = 2e-19
Identities = 63/115 (54%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
Frame = +1
Query: 280 DPNKSTDTLEPEDSSIGGLLVPEKDRVVF-RPQRKSILGLDALANAKRLESKVDGSFKVP 456
D NK+T TLEPE S GGL VP KDRVV+ +P+RKS GLD LA AKR S+ DG+FKVP
Sbjct: 12 DVNKTTVTLEPEKSISGGLYVPGKDRVVYVQPERKSRFGLDTLAIAKRAGSQSDGAFKVP 71
Query: 457 KERVSSVAASLGEDEEKSSSSGIDEVEDGTSNSVRSFTNRRYRELASTKTSNSGS 621
KE ++S+AA+ EDE+KS SS VE+ + R +RRYRE S +TS + S
Sbjct: 72 KEIITSIAAA-AEDEDKSESS---VVEESGNAGTRKHAHRRYRETTS-ETSRAES 121
>gb|ESW22392.1| hypothetical protein PHAVU_005G150000g [Phaseolus vulgaris]
Length = 1272
Score = 100 bits (250), Expect = 3e-19
Identities = 64/115 (55%), Positives = 78/115 (67%), Gaps = 1/115 (0%)
Frame = +1
Query: 280 DPNKSTDTLEPEDSSIGGLLVPEKDRVVFRPQ-RKSILGLDALANAKRLESKVDGSFKVP 456
D NK+T TLEPE + GGL V KDRVV+ PQ RKS LGLDALA+AKR + DG FK+P
Sbjct: 12 DINKTTTTLEPEKPTRGGLCVSGKDRVVYVPQERKSRLGLDALASAKRGGTHYDGGFKLP 71
Query: 457 KERVSSVAASLGEDEEKSSSSGIDEVEDGTSNSVRSFTNRRYRELASTKTSNSGS 621
KER S+AAS EDE+KS S+ ++E E G S T RRYRE T+++GS
Sbjct: 72 KERTISIAAS-AEDEDKSESTVVEESEQGAIVSTHRHT-RRYRE-----TTHAGS 119
>ref|XP_006595050.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16-like isoform X2 [Glycine max]
gi|571503064|ref|XP_006595051.1| PREDICTED:
pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16-like isoform X3 [Glycine max]
Length = 1271
Score = 97.4 bits (241), Expect = 3e-18
Identities = 66/121 (54%), Positives = 79/121 (65%), Gaps = 2/121 (1%)
Frame = +1
Query: 268 SGPFDPNKSTDTLEPEDSSIGGLLVPEKDRVVFRPQ-RKSILGLDALANAKRLESKVDGS 444
+G D +K+T TLE E + GGL VP KDRVV+ PQ RKS LGLDALA+AKR S+ D
Sbjct: 8 AGVIDIDKTTTTLEQEKPTSGGLYVPGKDRVVYVPQERKSRLGLDALASAKR--SQHDVG 65
Query: 445 FKVPKERVSSVAASLGEDEEKSSSSGIDEV-EDGTSNSVRSFTNRRYRELASTKTSNSGS 621
FKVPKER S+AAS EDE+KS SS +E DG N R TNRRYR+ + + S
Sbjct: 66 FKVPKERTISIAAS-AEDEDKSESSVSEESGHDGIVNR-RRHTNRRYRDTTNETSHAESS 123
Query: 622 V 624
V
Sbjct: 124 V 124
>ref|XP_003547002.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16-like isoform X1 [Glycine max]
Length = 1272
Score = 97.4 bits (241), Expect = 3e-18
Identities = 65/121 (53%), Positives = 79/121 (65%), Gaps = 2/121 (1%)
Frame = +1
Query: 268 SGPFDPNKSTDTLEPEDSSIGGLLVPEKDRVVFRPQ-RKSILGLDALANAKRLESKVDGS 444
+G D +K T TLEPE + GGL VP KDR+V+ PQ RKS LGLDALA+AKR S+ D
Sbjct: 10 AGVVDIDKITATLEPEKPTSGGLYVPGKDRMVYVPQERKSRLGLDALASAKR--SQHDAG 67
Query: 445 FKVPKERVSSVAASLGEDEEKSSSSGIDEV-EDGTSNSVRSFTNRRYRELASTKTSNSGS 621
FKVPKER S+AAS EDE+KS S +E DG N R TNRRYR+ + + + S
Sbjct: 68 FKVPKERTISIAAS-AEDEDKSELSVSEESGHDGIVNR-RRHTNRRYRDTTNETSHSESS 125
Query: 622 V 624
V
Sbjct: 126 V 126
>ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16-like isoform X1 [Glycine max]
Length = 1270
Score = 97.4 bits (241), Expect = 3e-18
Identities = 66/121 (54%), Positives = 79/121 (65%), Gaps = 2/121 (1%)
Frame = +1
Query: 268 SGPFDPNKSTDTLEPEDSSIGGLLVPEKDRVVFRPQ-RKSILGLDALANAKRLESKVDGS 444
+G D +K+T TLE E + GGL VP KDRVV+ PQ RKS LGLDALA+AKR S+ D
Sbjct: 8 AGVIDIDKTTTTLEQEKPTSGGLYVPGKDRVVYVPQERKSRLGLDALASAKR--SQHDVG 65
Query: 445 FKVPKERVSSVAASLGEDEEKSSSSGIDEV-EDGTSNSVRSFTNRRYRELASTKTSNSGS 621
FKVPKER S+AAS EDE+KS SS +E DG N R TNRRYR+ + + S
Sbjct: 66 FKVPKERTISIAAS-AEDEDKSESSVSEESGHDGIVNR-RRHTNRRYRDTTNETSHAESS 123
Query: 622 V 624
V
Sbjct: 124 V 124
>ref|XP_002316148.2| hypothetical protein POPTR_0010s17940g [Populus trichocarpa]
gi|550330040|gb|EEF02319.2| hypothetical protein
POPTR_0010s17940g [Populus trichocarpa]
Length = 1284
Score = 97.1 bits (240), Expect = 4e-18
Identities = 61/117 (52%), Positives = 81/117 (69%), Gaps = 7/117 (5%)
Frame = +1
Query: 280 DPNKSTDTLEPEDS--SIGGLLVPEKDRVVFRP-QRKSILGLDALANAKRLESKVD-GSF 447
D +KS T+E E S S GGL VP+K+++ FRP +RKS+LGLD LA AKR S + G F
Sbjct: 2 DIDKSVVTMEAEQSNGSAGGLFVPKKEKLEFRPPERKSLLGLDVLAIAKRGGSDANGGGF 61
Query: 448 KVPKER-VSSVAASLGEDEEKSSSSGIDEVED--GTSNSVRSFTNRRYRELASTKTS 609
K PKER +S AS+ E+EE + SSG+DEVE+ G+ + VR NRRYRE +S++ S
Sbjct: 62 KAPKERATTSFMASIDEEEEATESSGLDEVENDGGSESGVRRNVNRRYRETSSSEKS 118
>ref|XP_006484342.1| PREDICTED: mRNA cap guanine-N7 methyltransferase-like [Citrus
sinensis]
Length = 301
Score = 87.8 bits (216), Expect = 2e-15
Identities = 55/107 (51%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
Frame = +1
Query: 280 DPNKSTDTLEPEDSSIGGLLVPEKDRVVFR-PQRKSILGLDALANAKRLESKVDGSFKVP 456
D +K+T LEPE ++ GGL VP K+R +FR P K+ GL A K S++D FKVP
Sbjct: 11 DLDKTTQLLEPEITNGGGLFVPNKERPIFRAPGAKAQSGLGVRAVEKGGGSQIDDGFKVP 70
Query: 457 KERVSSVAASLGEDEEKSSSSGIDEVEDGTSNSVRSFTNRRYRELAS 597
RV+SVAAS+ E EEKS SSGIDEV +N RS +RRYRE ++
Sbjct: 71 --RVASVAASIDE-EEKSESSGIDEVVSNATNGKRSHASRRYRETSA 114
>ref|XP_006484072.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16-like [Citrus sinensis]
Length = 1284
Score = 87.8 bits (216), Expect = 2e-15
Identities = 55/107 (51%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
Frame = +1
Query: 280 DPNKSTDTLEPEDSSIGGLLVPEKDRVVFR-PQRKSILGLDALANAKRLESKVDGSFKVP 456
D +K+T LEPE ++ GGL VP K+R +FR P K+ GL A K S++D FKVP
Sbjct: 11 DLDKTTQLLEPEITNGGGLFVPNKERPIFRAPGAKAQSGLGVRAVEKGGGSQIDDGFKVP 70
Query: 457 KERVSSVAASLGEDEEKSSSSGIDEVEDGTSNSVRSFTNRRYRELAS 597
RV+SVAAS+ E EEKS SSGIDEV +N RS +RRYRE ++
Sbjct: 71 --RVASVAASIDE-EEKSESSGIDEVVSNATNGKRSHASRRYRETSA 114
>ref|XP_006438067.1| hypothetical protein CICLE_v100305311mg, partial [Citrus
clementina] gi|557540263|gb|ESR51307.1| hypothetical
protein CICLE_v100305311mg, partial [Citrus clementina]
Length = 402
Score = 87.8 bits (216), Expect = 2e-15
Identities = 55/107 (51%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
Frame = +1
Query: 280 DPNKSTDTLEPEDSSIGGLLVPEKDRVVFR-PQRKSILGLDALANAKRLESKVDGSFKVP 456
D +K+T LEPE ++ GGL VP K+R +FR P K+ GL A K S++D FKVP
Sbjct: 11 DLDKTTQLLEPEITNGGGLFVPNKERPIFRAPGAKAQSGLGVRAVEKGGVSQIDDGFKVP 70
Query: 457 KERVSSVAASLGEDEEKSSSSGIDEVEDGTSNSVRSFTNRRYRELAS 597
RV+SVAAS+ E EEKS SSGIDEV +N RS +RRYRE ++
Sbjct: 71 --RVASVAASIDE-EEKSESSGIDEVVSNATNGKRSHASRRYRETSA 114
>ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16-like [Cucumis sativus]
Length = 1298
Score = 85.1 bits (209), Expect = 1e-14
Identities = 53/121 (43%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
Frame = +1
Query: 262 GDSGPFDPNKSTDTLEPEDSSIGGLLVPEKDRVVFR-PQRKSILGLDALANAKRLESKVD 438
G D +++T LEPE+++ GGL VP KD+ VFR P+R+S LGLD LANAKR S D
Sbjct: 5 GGDDAIDIDRTTLLLEPENNTEGGLSVPGKDKPVFRPPERRSHLGLDVLANAKRGGSN-D 63
Query: 439 GSFKVPKERVSSVAASLGEDEEKSSSSGIDEVEDGTSNSVRSFTNRRYRELASTKTSNSG 618
FK+P++ ++S +S+ E+E+ SSG+ + S NR YRE+AS SN G
Sbjct: 64 NGFKIPQQSIASFVSSM-EEEDTIESSGVTDSGKEAIPRSHSVKNRNYREIAS-NDSNEG 121
Query: 619 S 621
+
Sbjct: 122 N 122
>ref|NP_196805.2| RNA helicase family protein [Arabidopsis thaliana]
gi|332004458|gb|AED91841.1| RNA helicase family protein
[Arabidopsis thaliana]
Length = 1255
Score = 83.6 bits (205), Expect = 4e-14
Identities = 52/111 (46%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Frame = +1
Query: 280 DPNKSTDTLEPEDSSIGGLLVPEKDRVVFR-PQRKSILGLDALANAKRLESKVDGSFKVP 456
DP K+T+TLE + + GG VP KD++ F+ P+RKS LGLDA A K+ +K +G FKVP
Sbjct: 4 DPFKTTETLEADKETNGG--VPVKDKLTFKAPERKSRLGLDARAIEKKDNAKTEGEFKVP 61
Query: 457 KERVSSVAASLGEDEEKSSSSGIDEVEDGTSNSVRSFTNRRYRELASTKTS 609
K+ SV +SL ++E+KS SG+D GT N+ ++RRYRE +S S
Sbjct: 62 KKSAISVTSSL-DEEDKSDVSGLD---FGTENTRPVHSSRRYREKSSRSQS 108
>emb|CAB88265.1| pre-mRNA splicing factor ATP-dependent RNA helicase-like protein
[Arabidopsis thaliana]
Length = 1226
Score = 83.6 bits (205), Expect = 4e-14
Identities = 52/111 (46%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Frame = +1
Query: 280 DPNKSTDTLEPEDSSIGGLLVPEKDRVVFR-PQRKSILGLDALANAKRLESKVDGSFKVP 456
DP K+T+TLE + + GG VP KD++ F+ P+RKS LGLDA A K+ +K +G FKVP
Sbjct: 4 DPFKTTETLEADKETNGG--VPVKDKLTFKAPERKSRLGLDARAIEKKDNAKTEGEFKVP 61
Query: 457 KERVSSVAASLGEDEEKSSSSGIDEVEDGTSNSVRSFTNRRYRELASTKTS 609
K+ SV +SL ++E+KS SG+D GT N+ ++RRYRE +S S
Sbjct: 62 KKSAISVTSSL-DEEDKSDVSGLD---FGTENTRPVHSSRRYREKSSRSQS 108