BLASTX nr result
ID: Rehmannia22_contig00026293
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00026293
(563 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas... 99 2e-33
ref|XP_004301904.1| PREDICTED: uncharacterized protein LOC101292... 93 7e-32
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas... 86 2e-31
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas... 99 2e-30
ref|XP_004292256.1| PREDICTED: uncharacterized protein LOC101292... 85 1e-27
emb|CAA12932.1| reverse transcriptase [Pinus elliottii] 90 4e-22
emb|CAD40511.2| OSJNBa0050F15.5 [Oryza sativa Japonica Group] 80 5e-22
ref|XP_004306169.1| PREDICTED: uncharacterized protein LOC101307... 93 7e-22
gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays] 83 1e-21
gb|EOY02238.1| Uncharacterized protein TCM_016762 [Theobroma cacao] 78 1e-21
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258... 72 1e-21
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261... 71 1e-21
gb|AAX95233.1| retrotransposon protein, putative, unclassified [... 76 1e-21
gb|AAX95130.1| retrotransposon protein, putative, unclassified [... 76 1e-21
emb|CAE03781.1| OSJNBa0063G07.5 [Oryza sativa Japonica Group] 81 3e-21
emb|CAH66559.1| OSIGBa0113K06.5 [Oryza sativa Indica Group] 81 3e-21
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 71 9e-21
gb|AAV31301.1| hypothetical protein [Oryza sativa Japonica Group] 80 9e-21
emb|CAD40197.1| OSJNBb0043H09.5 [Oryza sativa Japonica Group] 76 1e-20
emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulga... 82 1e-20
>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 528
Score = 99.4 bits (246), Expect(3) = 2e-33
Identities = 51/100 (51%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Frame = -3
Query: 399 NASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFIQGR 220
NA+ + LIPKT++A+S++ FRPI M+ F FKII+KILA RL I+ +S Q GFIQGR
Sbjct: 173 NANTLILIPKTQNADSMDQFRPIAMANFKFKIISKILADRLAQIMPNIVSQEQRGFIQGR 232
Query: 219 QIHDCIAMVSEGFNVLHGR-MDANMILKIDIRKAFDMLRW 103
I DC+ + SE N+L + N+ K+DI KAFD L W
Sbjct: 233 NIKDCVCLASEAINMLDQKSFGGNLAFKVDISKAFDTLNW 272
Score = 46.2 bits (108), Expect(3) = 2e-33
Identities = 18/33 (54%), Positives = 28/33 (84%)
Frame = -2
Query: 100 FLLHVLRRFGFSEIFIHWVDVILRSSRISVLLN 2
FLL VL++FGFSE F +W+D IL+S+++S+ +N
Sbjct: 274 FLLKVLKQFGFSETFCNWIDAILQSAKLSICIN 306
Score = 43.5 bits (101), Expect(3) = 2e-33
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = -1
Query: 563 NEILLGKVIPDKTDSSPGPDDFNGTFYRHFWDVISTDVSAAVRFFFISSSLPP 405
N+ + V DS+PGPD F FY+ +WD++ DV AV FF + + P
Sbjct: 118 NDEIKQAVFSLNNDSAPGPDGFGSCFYQIYWDIVKEDVIKAVLQFFNTGWILP 170
>ref|XP_004301904.1| PREDICTED: uncharacterized protein LOC101292910 [Fragaria vesca
subsp. vesca]
Length = 851
Score = 93.2 bits (230), Expect(3) = 7e-32
Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Frame = -3
Query: 411 TSGLNASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGF 232
++ N+ + LIPK + A+S + FRPI ++ F+FKII KILA RL S+ +SP Q F
Sbjct: 436 SASFNSGLIILIPKVEHADSTKQFRPIALTDFVFKIIPKILALRLSSVSARIISPQQHAF 495
Query: 231 IQGRQIHDCIAMVSEGFNVLHGR-MDANMILKIDIRKAFDMLRW 103
+ GR I +CI SE FN+L + N+ +K+DI KAFD L W
Sbjct: 496 VPGRNISNCILTTSECFNLLDSKGFGGNVAVKVDITKAFDTLSW 539
Score = 46.2 bits (108), Expect(3) = 7e-32
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -1
Query: 524 DSSPGPDDFNGTFYRHFWDVISTDVSAAVRFFFISSSL 411
DS+ GPD FNG F+ WD++ DV AV++FF++ L
Sbjct: 398 DSALGPDGFNGHFFASCWDIVGVDVVNAVQYFFVNGQL 435
Score = 44.3 bits (103), Expect(3) = 7e-32
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = -2
Query: 100 FLLHVLRRFGFSEIFIHWVDVILRSSRISVLLN 2
FLLHVL+ FGF+ F+ WV +L+S+++S+L N
Sbjct: 541 FLLHVLQAFGFNHTFVRWVCALLKSAKLSILFN 573
>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
H; Endonuclease/exonuclease/phosphatase [Medicago
truncatula]
Length = 1246
Score = 85.9 bits (211), Expect(3) = 2e-31
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = -3
Query: 402 LNASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFIQG 223
+N++ + LIPK A + ++RPI ++ F FKII+KILA RL I +S Q GFI+
Sbjct: 498 INSNLIVLIPKVPGARVMGDYRPIALANFQFKIISKILADRLADITMRIISVEQRGFIRD 557
Query: 222 RQIHDCIAMVSEGFNVLHGRM-DANMILKIDIRKAFDMLRW 103
R I C+ + SE N+L R N+ LK+DI KAFD L W
Sbjct: 558 RDISKCVILASEAINLLEKRQYGGNVALKVDIAKAFDTLDW 598
Score = 49.7 bits (117), Expect(3) = 2e-31
Identities = 22/33 (66%), Positives = 29/33 (87%)
Frame = -2
Query: 100 FLLHVLRRFGFSEIFIHWVDVILRSSRISVLLN 2
FLL VL+RFGF E F+HW+ VIL+S+R+SVL+N
Sbjct: 600 FLLAVLQRFGFDEKFVHWILVILQSARLSVLVN 632
Score = 46.6 bits (109), Expect(3) = 2e-31
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -1
Query: 524 DSSPGPDDFNGTFYRHFWDVISTDVSAAVRFFFISSSL 411
D +PGP+ F G FY+ +WD++ DV +V+ FFIS L
Sbjct: 457 DGAPGPNGFGGHFYQTYWDIVGADVIQSVQDFFISGQL 494
>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 642
Score = 99.4 bits (246), Expect(3) = 2e-30
Identities = 50/103 (48%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Frame = -3
Query: 408 SGLNASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFI 229
+ NA+ + LIPKT +A+S++ +R I + F FKII K+LA RL I+ + +S Q GF+
Sbjct: 231 NNFNANSIILIPKTPNADSVDQYRTIALVNFKFKIINKVLADRLAKILPSIISKEQRGFV 290
Query: 228 QGRQIHDCIAMVSEGFNVLHGR-MDANMILKIDIRKAFDMLRW 103
QGR I DCIA+ SE NVL + N+ LKID+ KAFD L W
Sbjct: 291 QGRNIRDCIALTSEAINVLDNKSFGGNLALKIDVTKAFDTLNW 333
Score = 39.7 bits (91), Expect(3) = 2e-30
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -1
Query: 527 TDSSPGPDDFNGTFYRHFWDVISTDVSAAVRFFFISSSLP 408
+D +PGPD F F++ +W+++ DV AV FF + LP
Sbjct: 191 SDDAPGPDVFGACFFQIYWNIVKKDVYEAVLDFFKNGWLP 230
Score = 39.7 bits (91), Expect(3) = 2e-30
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = -2
Query: 100 FLLHVLRRFGFSEIFIHWVDVILRSSRISVLLN 2
FLL VL+ FGF+E+F +W+ IL SS++ + +N
Sbjct: 335 FLLLVLKTFGFNELFCNWIKTILHSSKMFISMN 367
>ref|XP_004292256.1| PREDICTED: uncharacterized protein LOC101292376 [Fragaria vesca
subsp. vesca]
Length = 220
Score = 84.7 bits (208), Expect(3) = 1e-27
Identities = 48/103 (46%), Positives = 63/103 (61%), Gaps = 4/103 (3%)
Frame = -3
Query: 399 NASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFIQGR 220
N+ + LI K A+SI+ FR IV++ F+FKII KI+A RL S+ +SP Q F+ GR
Sbjct: 71 NSGIIMLILKVDHADSIKQFRHIVLTNFVFKIIPKIIAIRLASVASRIISPQQHAFVAGR 130
Query: 219 QIHDCIAMVSEGFNVL----HGRMDANMILKIDIRKAFDMLRW 103
I D I SE FN+L HG N+ +K+DI KAFD L W
Sbjct: 131 NISDFILTTSECFNLLNSICHG---GNLAIKVDITKAFDTLSW 170
Score = 43.1 bits (100), Expect(3) = 1e-27
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = -2
Query: 100 FLLHVLRRFGFSEIFIHWVDVILRSSRISVLLN 2
FLLHVL FGF IF+ WV +L S+++S+L+N
Sbjct: 172 FLLHVLHAFGFDLIFVQWVRALLLSAKLSLLIN 204
Score = 41.6 bits (96), Expect(3) = 1e-27
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -1
Query: 524 DSSPGPDDFNGTFYRHFWDVISTDVSAAVRFFFISSSLPP 405
DS+ GPD FNG F+ W+V+ DV V++FF L P
Sbjct: 29 DSALGPDGFNGHFFVSCWEVVGADVVKGVQYFFQHGYLAP 68
>emb|CAA12932.1| reverse transcriptase [Pinus elliottii]
Length = 194
Score = 90.1 bits (222), Expect(3) = 4e-22
Identities = 41/100 (41%), Positives = 69/100 (69%)
Frame = -3
Query: 402 LNASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFIQG 223
LN++F+AL+PK ++A++ E FRPI + ++KII+K++A RL I+ +S Q G+++G
Sbjct: 40 LNSTFIALVPKVEEAHTPEKFRPIALCNVIYKIISKVIANRLKIILPGIISQEQSGYVEG 99
Query: 222 RQIHDCIAMVSEGFNVLHGRMDANMILKIDIRKAFDMLRW 103
RQI D I + E + LH R A M++++D+ KA+D + W
Sbjct: 100 RQILDNILLAQEMIHSLHSRKVAGMLIQLDLSKAYDKVSW 139
Score = 33.1 bits (74), Expect(3) = 4e-22
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -2
Query: 100 FLLHVLRRFGFSEIFIHWVDVILRSSRISVLLN 2
+L +L+ FGFS +I WV +++S R SVL+N
Sbjct: 141 YLEAILKAFGFSRPWIKWVLELIKSMRYSVLVN 173
Score = 27.3 bits (59), Expect(3) = 4e-22
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 515 PGPDDFNGTFYRHFWDVISTDV 450
PGPD FY+ W+++ D+
Sbjct: 2 PGPDGITINFYKVCWEIVKNDI 23
>emb|CAD40511.2| OSJNBa0050F15.5 [Oryza sativa Japonica Group]
Length = 571
Score = 79.7 bits (195), Expect(3) = 5e-22
Identities = 42/100 (42%), Positives = 58/100 (58%)
Frame = -3
Query: 402 LNASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFIQG 223
LN++F+ L+PK DAN E++RPI + L KII+K+LA RL + +SP Q FI+
Sbjct: 73 LNSTFICLLPKKDDANGAEHYRPISLIHSLSKIISKLLANRLAPELPELVSPNQSAFIRK 132
Query: 222 RQIHDCIAMVSEGFNVLHGRMDANMILKIDIRKAFDMLRW 103
R IHD V LH ++ K+DI KAFD + W
Sbjct: 133 RAIHDNFLYVQNMVKFLHKSKKQSLFFKVDIAKAFDTVCW 172
Score = 38.9 bits (89), Expect(3) = 5e-22
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -1
Query: 560 EILLGKVIPDKTDSSPGPDDFNGTFYRHFWDVISTDVSAAVRFFFISSSL 411
E L + + +PGPD F G FY+ W++I D+ AV FF ++L
Sbjct: 19 EELKATIFSMPAEKAPGPDGFIGAFYKAAWEIIKEDLLKAVISFFNRNTL 68
Score = 31.6 bits (70), Expect(3) = 5e-22
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -2
Query: 100 FLLHVLRRFGFSEIFIHWVDVILRSSRISVLLN 2
+LL V+R FGF ++W+ +L +S +LLN
Sbjct: 174 YLLEVMRYFGFGTQSLNWISNLLATSTSQILLN 206
>ref|XP_004306169.1| PREDICTED: uncharacterized protein LOC101307720 [Fragaria vesca
subsp. vesca]
Length = 326
Score = 92.8 bits (229), Expect(2) = 7e-22
Identities = 48/101 (47%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Frame = -3
Query: 402 LNASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFIQG 223
LN++F+ALIPK ++A+ I F+PI M+ F FKIIT ILA RL I + P QF F++G
Sbjct: 223 LNSNFVALIPKVQEADVITQFQPIAMANFSFKIITHILADRLAPIASRIILPNQFAFLKG 282
Query: 222 RQIHDCIAMVSEGFNVLHGR-MDANMILKIDIRKAFDMLRW 103
RQI DC + E N+L + N+ +K D+ KAFD L W
Sbjct: 283 RQISDCTFLTLECVNLLDTKCRGGNVAIKFDVAKAFDTLNW 323
Score = 37.0 bits (84), Expect(2) = 7e-22
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -1
Query: 524 DSSPGPDDFNGTFYRHFWDVISTDVSAAVRFFFISSSLPP 405
DS+PG D + G F++ WDV+ V A++ FF + + P
Sbjct: 182 DSAPGKDGYTGHFFQACWDVVGLYVIGAIKSFFQTGYILP 221
>gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]
Length = 2749
Score = 83.2 bits (204), Expect(3) = 1e-21
Identities = 41/100 (41%), Positives = 62/100 (62%)
Frame = -3
Query: 402 LNASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFIQG 223
LN +++ LIPK + A+ ++NFRPI + + K++TK+LA RL + +SP Q FI+G
Sbjct: 2053 LNTAYITLIPKFEGADQVKNFRPISLVHSVAKLLTKLLANRLAGRLHDMVSPNQSAFIKG 2112
Query: 222 RQIHDCIAMVSEGFNVLHGRMDANMILKIDIRKAFDMLRW 103
R I D +V + LH + M+LK+DI KAFD + W
Sbjct: 2113 RFIQDNYMLVQQTTRYLHQQKQPRMLLKLDISKAFDSVSW 2152
Score = 39.3 bits (90), Expect(3) = 1e-21
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -1
Query: 527 TDSSPGPDDFNGTFYRHFWDVISTDVSA 444
+D +PGPD F G FYR W++I DV A
Sbjct: 2010 SDKAPGPDGFTGKFYRVCWEIIKADVMA 2037
Score = 26.6 bits (57), Expect(3) = 1e-21
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 100 FLLHVLRRFGFSEIFIHWVDVILRSSRISVLLN 2
FLL VL+ GF +++ + +L +S VLLN
Sbjct: 2154 FLLEVLQHLGFGQVWRDIISGLLWTSSSQVLLN 2186
>gb|EOY02238.1| Uncharacterized protein TCM_016762 [Theobroma cacao]
Length = 2214
Score = 78.2 bits (191), Expect(3) = 1e-21
Identities = 39/102 (38%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Frame = -3
Query: 405 GLNASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFIQ 226
G+ ++ + L+PKT++ + FRPI + L KI+TK+LA RL I+ + +S Q GF+
Sbjct: 1333 GITSTTLVLLPKTQNVSQWSEFRPISLCTVLNKIVTKLLANRLSKILPSIISENQSGFVN 1392
Query: 225 GRQIHDCIAMVSEGFNVLHGR-MDANMILKIDIRKAFDMLRW 103
GR I D I + E + ++ R N++LK+D+ KA+D L W
Sbjct: 1393 GRLISDNILLAQELVDKINARSRGGNVVLKLDMAKAYDRLNW 1434
Score = 46.6 bits (109), Expect(3) = 1e-21
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = -1
Query: 524 DSSPGPDDFNGTFYRHFWDVISTDVSAAVRFFFISSSLPPG*T 396
DS GPD F+ FY+H WD+I D+ AV FF S LP G T
Sbjct: 1293 DSVAGPDGFSSLFYQHCWDIIKQDLFEAVLDFFKGSPLPRGIT 1335
Score = 24.3 bits (51), Expect(3) = 1e-21
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = -2
Query: 100 FLLHVLRRFGFSEIFIHWVDVILRSSRISVLLN 2
FL ++ +FGF+ ++I+ + + + S+L+N
Sbjct: 1436 FLYLMMEQFGFNALWINMIKACISNCWFSLLIN 1468
>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
lycopersicum]
Length = 1454
Score = 71.6 bits (174), Expect(3) = 1e-21
Identities = 38/103 (36%), Positives = 63/103 (61%), Gaps = 4/103 (3%)
Frame = -3
Query: 387 MALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFIQGRQIHD 208
+ L+PK + ++ FRPI +S F KII+KI++TRL SI+ +S Q GF++GR I +
Sbjct: 563 LILLPKVEHPCKLKEFRPISLSNFSNKIISKIMSTRLASILPCVVSENQSGFVKGRSISE 622
Query: 207 CIAMVSEGFNVLHG----RMDANMILKIDIRKAFDMLRWASCC 91
I + E ++HG R +N+++K+ + KA+D + W C
Sbjct: 623 NILLAHE---IIHGIKKPRDGSNVVIKLGMVKAYDRVSWTYTC 662
Score = 47.8 bits (112), Expect(3) = 1e-21
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = -1
Query: 524 DSSPGPDDFNGTFYRHFWDVISTDVSAAVRFFFISSSLP 408
+S+PGPD F G FY+ +D+I D+ AAV +F+I +S+P
Sbjct: 517 NSAPGPDGFGGKFYQTCFDIIKKDLLAAVNYFYIGNSMP 555
Score = 29.3 bits (64), Expect(3) = 1e-21
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -2
Query: 88 VLRRFGFSEIFIHWVDVILRSSRISVLLN 2
VLRR GFSEIFI + I+ ++ S+++N
Sbjct: 664 VLRRMGFSEIFIDRIWRIMSNNWYSIVIN 692
>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
lycopersicum]
Length = 1246
Score = 71.2 bits (173), Expect(3) = 1e-21
Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Frame = -3
Query: 402 LNASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFIQG 223
L + + L+PKT +++FRPI +S F KII+KI++TR G I+ + Q GF++G
Sbjct: 392 LTHASLILLPKTDHPCRLKDFRPISLSNFANKIISKIISTRFGLILPGIIFENQSGFVKG 451
Query: 222 RQIHDCIAMVSEGFN-VLHGRMDANMILKIDIRKAFDMLRWASCC 91
R I + I + E N + + +N+++K+D+ KA+D + W C
Sbjct: 452 RSIAENILLAQEIINGIKKPKEGSNVVIKLDMVKAYDRVSWTYTC 496
Score = 49.3 bits (116), Expect(3) = 1e-21
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = -1
Query: 554 LLGKVIPDKTDSSPGPDDFNGTFYRHFWDVISTDVSAAVRFFFISSSLP 408
L G ++ S+PGPD F G FY+ +D+I D+ AAV++F+I +S+P
Sbjct: 341 LRGVIMSMNPHSAPGPDGFGGKFYQVCFDIIKEDLLAAVKYFYIGNSMP 389
Score = 28.1 bits (61), Expect(3) = 1e-21
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -2
Query: 88 VLRRFGFSEIFIHWVDVILRSSRISVLLN 2
VLR+ GFSE+FI V I+ ++ S+++N
Sbjct: 498 VLRKLGFSEVFIDRVWRIMSNNWYSIVIN 526
>gb|AAX95233.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1018
Score = 75.9 bits (185), Expect(3) = 1e-21
Identities = 40/100 (40%), Positives = 57/100 (57%)
Frame = -3
Query: 402 LNASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFIQG 223
LN++F+ L+PK +DA E++RPI + KII+KILA RL + +S Q F++
Sbjct: 484 LNSAFICLLPKKEDALGAEHYRPISLIHSFSKIISKILANRLAPRLCELVSTNQSAFVRK 543
Query: 222 RQIHDCIAMVSEGFNVLHGRMDANMILKIDIRKAFDMLRW 103
R IHD V LH ++ +KIDI KAFD + W
Sbjct: 544 RAIHDNFVFVKNMVQYLHRTKKTSLFIKIDIAKAFDTVCW 583
Score = 39.7 bits (91), Expect(3) = 1e-21
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = -1
Query: 524 DSSPGPDDFNGTFYRHFWDVISTDVSAAVRFFFISSSL 411
+ +PGPD F G F++ W++I+ D+ + VR FF ++L
Sbjct: 442 EKAPGPDGFIGAFFKSAWEIINEDLLSTVRSFFDLNTL 479
Score = 33.1 bits (74), Expect(3) = 1e-21
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = -2
Query: 100 FLLHVLRRFGFSEIFIHWVDVILRSSRISVLLN 2
+LL VLR+FGF +++W+ +L +S +LLN
Sbjct: 585 YLLEVLRQFGFGIRWLNWISNLLATSSSQMLLN 617
>gb|AAX95130.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|108864081|gb|ABG22397.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 930
Score = 75.9 bits (185), Expect(3) = 1e-21
Identities = 40/100 (40%), Positives = 57/100 (57%)
Frame = -3
Query: 402 LNASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFIQG 223
LN++F+ L+PK +DA E++RPI + KII+KILA RL + +S Q F++
Sbjct: 396 LNSAFICLLPKKEDALGAEHYRPISLIHSFSKIISKILANRLAPRLCELVSTNQSAFVRK 455
Query: 222 RQIHDCIAMVSEGFNVLHGRMDANMILKIDIRKAFDMLRW 103
R IHD V LH ++ +KIDI KAFD + W
Sbjct: 456 RAIHDNFVFVKNMVQYLHRTKKTSLFIKIDIAKAFDTVCW 495
Score = 39.7 bits (91), Expect(3) = 1e-21
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = -1
Query: 524 DSSPGPDDFNGTFYRHFWDVISTDVSAAVRFFFISSSL 411
+ +PGPD F G F++ W++I+ D+ + VR FF ++L
Sbjct: 354 EKAPGPDGFIGAFFKSAWEIINEDLLSTVRSFFDLNTL 391
Score = 33.1 bits (74), Expect(3) = 1e-21
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = -2
Query: 100 FLLHVLRRFGFSEIFIHWVDVILRSSRISVLLN 2
+LL VLR+FGF +++W+ +L +S +LLN
Sbjct: 497 YLLEVLRQFGFGIRWLNWISNLLATSSSQMLLN 529
>emb|CAE03781.1| OSJNBa0063G07.5 [Oryza sativa Japonica Group]
Length = 681
Score = 80.9 bits (198), Expect(3) = 3e-21
Identities = 42/100 (42%), Positives = 58/100 (58%)
Frame = -3
Query: 402 LNASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFIQG 223
LN++F+ L+PK DAN E++RPI + L KII+K+LA RL + +SP Q FI+
Sbjct: 73 LNSAFICLLPKKDDANGAEHYRPISLIHSLSKIISKLLANRLAPELHELVSPNQSAFIRK 132
Query: 222 RQIHDCIAMVSEGFNVLHGRMDANMILKIDIRKAFDMLRW 103
R IHD V LH ++ K+DI KAFD + W
Sbjct: 133 RAIHDNFLYVQNMVKFLHKSKKQSLFFKVDIAKAFDTVCW 172
Score = 35.0 bits (79), Expect(3) = 3e-21
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -1
Query: 560 EILLGKVIPDKTDSSPGPDDFNGTFYRHFWDVISTDVSAAVRFFFISSSL 411
E L + + +PGPD F FY+ W++I D+ AV FF ++L
Sbjct: 19 EELKATIFSMPAEKAPGPDGFIRAFYKVAWEIIKEDLLKAVISFFNLNTL 68
Score = 31.6 bits (70), Expect(3) = 3e-21
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -2
Query: 100 FLLHVLRRFGFSEIFIHWVDVILRSSRISVLLN 2
+LL V+R FGF ++W+ +L +S +LLN
Sbjct: 174 YLLEVMRYFGFGTRSLNWISNLLATSTSQILLN 206
>emb|CAH66559.1| OSIGBa0113K06.5 [Oryza sativa Indica Group]
Length = 681
Score = 80.9 bits (198), Expect(3) = 3e-21
Identities = 42/100 (42%), Positives = 58/100 (58%)
Frame = -3
Query: 402 LNASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFIQG 223
LN++F+ L+PK DAN E++RPI + L KII+K+LA RL + +SP Q FI+
Sbjct: 73 LNSAFICLLPKKDDANGAEHYRPISLIHSLSKIISKLLANRLAPELHELVSPNQSAFIRK 132
Query: 222 RQIHDCIAMVSEGFNVLHGRMDANMILKIDIRKAFDMLRW 103
R IHD V LH ++ K+DI KAFD + W
Sbjct: 133 RAIHDNFLYVQNMVKFLHKSKKQSLFFKVDIAKAFDTVCW 172
Score = 35.0 bits (79), Expect(3) = 3e-21
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -1
Query: 560 EILLGKVIPDKTDSSPGPDDFNGTFYRHFWDVISTDVSAAVRFFFISSSL 411
E L + + +PGPD F FY+ W++I D+ AV FF ++L
Sbjct: 19 EELKATIFSMPAEKAPGPDGFIRAFYKVAWEIIKEDLLKAVISFFNLNTL 68
Score = 31.6 bits (70), Expect(3) = 3e-21
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -2
Query: 100 FLLHVLRRFGFSEIFIHWVDVILRSSRISVLLN 2
+LL V+R FGF ++W+ +L +S +LLN
Sbjct: 174 YLLEVMRYFGFGTRSLNWISNLLATSTSQILLN 206
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 71.2 bits (173), Expect(3) = 9e-21
Identities = 38/103 (36%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = -3
Query: 405 GLNASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFIQ 226
G+N++ +ALIPK K+A I+++RPI L+K I+KILA RL I+ ++ Q F++
Sbjct: 229 GVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVK 288
Query: 225 GRQIHDCIAMVSEGFNVLH-GRMDANMILKIDIRKAFDMLRWA 100
R + + + + +E H + +KIDI KAFD L+W+
Sbjct: 289 DRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWS 331
Score = 43.5 bits (101), Expect(3) = 9e-21
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = -1
Query: 524 DSSPGPDDFNGTFYRHFWDVISTDVSAAVRFFFISSSLPPG 402
D SPGPD + FY+ W++I +V A++ FF LP G
Sbjct: 189 DKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKG 229
Score = 31.2 bits (69), Expect(3) = 9e-21
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 100 FLLHVLRRFGFSEIFIHWVDVILRSSRISVLLN 2
FL HVL F FIHW+ + + ++ S+ +N
Sbjct: 332 FLTHVLAAMNFPGEFIHWISLCMSTASFSIQVN 364
>gb|AAV31301.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 637
Score = 79.7 bits (195), Expect(3) = 9e-21
Identities = 42/100 (42%), Positives = 57/100 (57%)
Frame = -3
Query: 402 LNASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFIQG 223
LN++F+ LIPK DA ++FRPI + KIITKILA RL + +S Q F++
Sbjct: 259 LNSAFICLIPKKDDATGADHFRPISLMHSFAKIITKILANRLAPRLNEMISQNQSAFVRK 318
Query: 222 RQIHDCIAMVSEGFNVLHGRMDANMILKIDIRKAFDMLRW 103
R IHD V +LH ++ +KIDI KAFD + W
Sbjct: 319 RAIHDNFLYVQNMVQMLHRSKKQSLFIKIDIAKAFDTVNW 358
Score = 33.1 bits (74), Expect(3) = 9e-21
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 524 DSSPGPDDFNGTFYRHFWDVISTDVSAAVRFF 429
+ +PGPD F G F++ W + D+ AA+ F
Sbjct: 217 EKAPGPDGFIGAFFKTAWPTVKDDLLAAILSF 248
Score = 33.1 bits (74), Expect(3) = 9e-21
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2
Query: 100 FLLHVLRRFGFSEIFIHWVDVILRSSRISVLLN 2
+LL VLR FGF ++ W+ ++ +S VLLN
Sbjct: 360 YLLKVLRHFGFGHRWLSWISNLISTSSSQVLLN 392
>emb|CAD40197.1| OSJNBb0043H09.5 [Oryza sativa Japonica Group]
Length = 858
Score = 75.9 bits (185), Expect(3) = 1e-20
Identities = 41/102 (40%), Positives = 57/102 (55%)
Frame = -3
Query: 402 LNASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFIQG 223
LN SF+ LIPK + ++RPI + K ++KILA RL ++I L Q+GFI+
Sbjct: 332 LNNSFICLIPKKSSPETANDYRPISVQNMSIKFLSKILAERLQAVILDLLHENQYGFIKQ 391
Query: 222 RQIHDCIAMVSEGFNVLHGRMDANMILKIDIRKAFDMLRWAS 97
R I DC+A E + H +ILKID KAFD + +S
Sbjct: 392 RTIQDCLAWTFEFLHQCHQSKKQIVILKIDFEKAFDSVEHSS 433
Score = 38.1 bits (87), Expect(3) = 1e-20
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 524 DSSPGPDDFNGTFYRHFWDVISTDVSAAVRFFF 426
D +PGPD FNG F + W++I+ D R FF
Sbjct: 291 DKAPGPDGFNGMFMKKCWNIIAEDFYKLAREFF 323
Score = 31.6 bits (70), Expect(3) = 1e-20
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -2
Query: 112 VEVGFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLN 2
VE +L VL+ GF+E ++ W+ +L +S +VLLN
Sbjct: 429 VEHSSILAVLKAKGFNETWLKWISDLLTTSSSAVLLN 465
>emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1383
Score = 82.0 bits (201), Expect(2) = 1e-20
Identities = 40/101 (39%), Positives = 65/101 (64%)
Frame = -3
Query: 405 GLNASFMALIPKTKDANSIENFRPIVMSIFLFKIITKILATRLGSIIFAYLSPTQFGFIQ 226
G N +++ALIPK + +S++++RPI M F++KI+ K+LA RL S+I + +SP Q +++
Sbjct: 484 GCNTAYIALIPKIDNPSSLKDYRPISMVGFIYKIVAKLLAKRLQSVISSLISPLQSSYVK 543
Query: 225 GRQIHDCIAMVSEGFNVLHGRMDANMILKIDIRKAFDMLRW 103
GRQI D + SE R ++LK+D KA+D + W
Sbjct: 544 GRQILDGALVASEIIESCKKRNIEAILLKLDFHKAYDSVSW 584
Score = 43.5 bits (101), Expect(2) = 1e-20
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -1
Query: 527 TDSSPGPDDFNGTFYRHFWDVISTDVSAAVRFFFISSSLPPG 402
+D +PGPD FN F + WD+I TD+ V F+ + LP G
Sbjct: 443 SDKAPGPDGFNFKFVKSAWDIIKTDIYGIVNDFWETGCLPQG 484