BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00026240
         (635 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352116.1| PREDICTED: DNA-directed RNA polymerase V sub...   172   7e-41
ref|XP_004247645.1| PREDICTED: DNA-directed RNA polymerase II su...   164   2e-38
ref|XP_002314653.1| hypothetical protein POPTR_0010s08780g [Popu...   157   2e-36
gb|EMJ24730.1| hypothetical protein PRUPE_ppa012042mg [Prunus pe...   155   1e-35
gb|EOY05898.1| RNA polymerase Rpb7-like, N-terminal domain, puta...   147   2e-33
gb|EOY05895.1| DNA-directed RNA polymerase II subunit RPB7, puta...   147   2e-33
emb|CBI26363.3| unnamed protein product [Vitis vinifera]              140   3e-31
ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II su...   139   7e-31
ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II su...   134   2e-29
ref|XP_004288440.1| PREDICTED: DNA-directed RNA polymerase II su...   134   3e-29
gb|EXB38410.1| DNA-directed RNA polymerase II subunit [Morus not...   133   4e-29
ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypep...   133   4e-29
ref|XP_006489790.1| PREDICTED: DNA-directed RNA polymerase V sub...   132   8e-29
ref|XP_006420614.1| hypothetical protein CICLE_v10006012mg [Citr...   132   8e-29
gb|EOY19674.1| RNA polymerase Rpb7-like, N-terminal domain [Theo...   131   1e-28
ref|XP_002312568.1| RNA polymerase Rpb7 N-terminal domain-contai...   130   4e-28
ref|XP_002868270.1| RNA polymerase Rpb7 N-terminal domain-contai...   129   5e-28
ref|NP_193202.2| DNA-directed RNA polymerase V subunit NRPE7 [Ar...   129   9e-28
gb|EOY19671.1| RNA polymerase Rpb7-like, N-terminal domain isofo...   128   1e-27
ref|XP_004288438.1| PREDICTED: DNA-directed RNA polymerase II su...   128   2e-27

>ref|XP_006352116.1| PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Solanum
           tuberosum]
          Length = 186

 Score =  172 bits (436), Expect = 7e-41
 Identities = 87/175 (49%), Positives = 124/175 (70%), Gaps = 1/175 (0%)
 Frame = -2

Query: 580 VAVPVKNLDRNREVLTSVIANRLLKQLSNVKACE-YGYLLAVTKLISIGHGDNVFSSQHI 404
           V VP++++ ++ E+  S++  RL  QL+ ++A E  GY L VTK+ S+G G  + SS++I
Sbjct: 11  VVVPMEDIKKSGELPGSIVIRRLFSQLTFLRATEDCGYFLKVTKVKSVGSGKLLDSSKYI 70

Query: 403 LFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLMPNYHYVSGESPA 224
           +FPV    R F+P  GEV+ GIV ++   GVFLK GPM+ +YLS R MPNY+YVSGE+P 
Sbjct: 71  MFPVTFHSRTFLPKTGEVLVGIVIEVCRHGVFLKCGPMNSIYLSVRKMPNYNYVSGENPF 130

Query: 223 FVREDSSKIEIGVVIRYIVFAVKWIEDKWREFRVLASIDGDGLGPVSLNGLDGMD 59
           F+  D S+IE  V +R++V+A++W     R+F VLASIDGD LGPVSLNG DG++
Sbjct: 131 FICNDQSRIENEVAVRFVVYAMRWSRTLVRKFDVLASIDGDSLGPVSLNGFDGLE 185


>ref|XP_004247645.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Solanum lycopersicum]
          Length = 186

 Score =  164 bits (415), Expect = 2e-38
 Identities = 84/175 (48%), Positives = 123/175 (70%), Gaps = 1/175 (0%)
 Frame = -2

Query: 580 VAVPVKNLDRNREVLTSVIANRLLKQLSNVKACE-YGYLLAVTKLISIGHGDNVFSSQHI 404
           V VP++++ ++ E+  ++I  RL  QL+ ++A E  GY L VTK+ S+G+G  + SS++I
Sbjct: 11  VVVPMEDIKKSGELPGNIIIRRLFSQLTFLRATEDCGYFLKVTKVKSVGNGKLLDSSKYI 70

Query: 403 LFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLMPNYHYVSGESPA 224
           +FPV      F+P  GEV+ GIV ++   GVFLK GPM+ +YLS R MPNY+YV GE+P 
Sbjct: 71  MFPVTFHSLTFLPKIGEVLVGIVVEVCRHGVFLKCGPMNSIYLSVRKMPNYNYVPGENPF 130

Query: 223 FVREDSSKIEIGVVIRYIVFAVKWIEDKWREFRVLASIDGDGLGPVSLNGLDGMD 59
           F+  D S+IE  V +R++V+A++W     R+F VLASI+GD LGPVSLNG DG++
Sbjct: 131 FICNDQSRIENEVAVRFVVYAMRWSRTLVRKFDVLASIEGDCLGPVSLNGFDGLE 185


>ref|XP_002314653.1| hypothetical protein POPTR_0010s08780g [Populus trichocarpa]
           gi|222863693|gb|EEF00824.1| hypothetical protein
           POPTR_0010s08780g [Populus trichocarpa]
          Length = 189

 Score =  157 bits (397), Expect = 2e-36
 Identities = 84/188 (44%), Positives = 119/188 (63%), Gaps = 4/188 (2%)
 Frame = -2

Query: 610 MLREVIFTFKVAVPVKNLDRNREVLTSVIANRLLKQLSNVKAC-EYGYLLAVTKLISIGH 434
           M  EV     V +  +NLDRN  V    I   LLK L ++KA  ++GY LAVT L SIG 
Sbjct: 1   MFGEVEVCSTVRIIAENLDRNGLVPQRSIVTHLLKDLLSMKASKDHGYFLAVTNLKSIGK 60

Query: 433 GDNVFSSQHILFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLMPN 254
           G+ V  S  +LF V+  CR F+P+ GE++ G+VH+    GV L+ GP+  ++LS+R MPN
Sbjct: 61  GEVVNKSGDVLFHVEFKCRTFMPMKGEILQGVVHRTFRHGVLLRCGPVKYIFLSARKMPN 120

Query: 253 YHYVSGESPAFVREDSSKIEIGVVIRYIVFAVKWIEDKW---REFRVLASIDGDGLGPVS 83
           Y Y S E+P F+ ++ ++IE  V++R+ V  V+WIE  W   R+F +LAS+ GD LGP+S
Sbjct: 121 YQYTSEENPVFLNDELARIENNVLVRFSVLDVRWIEKMWDMRRDFMMLASLVGDSLGPIS 180

Query: 82  LNGLDGMD 59
           L G D +D
Sbjct: 181 LCGSDELD 188


>gb|EMJ24730.1| hypothetical protein PRUPE_ppa012042mg [Prunus persica]
          Length = 186

 Score =  155 bits (391), Expect = 1e-35
 Identities = 87/187 (46%), Positives = 123/187 (65%), Gaps = 3/187 (1%)
 Frame = -2

Query: 610 MLREVIFTFKVAVPVKNLDRNREVLTSVIANRLLKQLSNVKACE-YGYLLAVTKLISIGH 434
           M  EV    +VAV  +NLDR++ V +  I  RLL+ L + KA E  GY LAVT +  IG 
Sbjct: 1   MFYEVELLREVAVLAENLDRDKLVSSRFIVTRLLEGLLSEKADEDLGYFLAVTGIKRIGK 60

Query: 433 GDNVFSSQHILFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLMPN 254
           G+ V +S  + FPV   CR+F+P  GE++ G+V  ++  GVFL+ GP+  V+LS+R MPN
Sbjct: 61  GEVVHNSGDVFFPVVFNCRMFLPRKGEILEGVVDHVHRLGVFLRCGPVKYVFLSARKMPN 120

Query: 253 YHYVSGESPAFVREDSSKIEIGVVIRYIVFAVKWI--EDKWREFRVLASIDGDGLGPVSL 80
           Y YV GE P F+ +D ++IE  VV+R+ VF V+W+  ED  +EF +LA++ GD LGPV+ 
Sbjct: 121 YRYVVGEKPVFLHDDLARIEKDVVVRFEVFGVRWMRREDITKEFMMLATLQGDLLGPVT- 179

Query: 79  NGLDGMD 59
            G DG+D
Sbjct: 180 -GPDGLD 185


>gb|EOY05898.1| RNA polymerase Rpb7-like, N-terminal domain, putative isoform 4
           [Theobroma cacao] gi|508714002|gb|EOY05899.1| RNA
           polymerase Rpb7-like, N-terminal domain, putative
           isoform 4 [Theobroma cacao]
          Length = 185

 Score =  147 bits (372), Expect = 2e-33
 Identities = 86/185 (46%), Positives = 112/185 (60%), Gaps = 1/185 (0%)
 Frame = -2

Query: 610 MLREVIFTFKVAVPVKNLDRNREVLTSVIANRLLKQLSNVKACE-YGYLLAVTKLISIGH 434
           M  EV     V V   NLD+   V    I   LL+ L   +A E +GY L+VT L SIG 
Sbjct: 1   MFSEVELQRDVKVHAGNLDKRGLVSQRSILVLLLEDLFKERASEDHGYFLSVTSLKSIGK 60

Query: 433 GDNVFSSQHILFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLMPN 254
           GD V  S +++F V   CR F P  GEV+ G+VH I  RGVFL+ GP+ + YLS+  MPN
Sbjct: 61  GDVVDESGNMVFTVVFTCRTFKPFKGEVLQGVVHHICHRGVFLRCGPVRIAYLSAWKMPN 120

Query: 253 YHYVSGESPAFVREDSSKIEIGVVIRYIVFAVKWIEDKWREFRVLASIDGDGLGPVSLNG 74
           YHYV G  P F+ +D SKIE  VV+ ++V AV+WI    R+F +LAS++ D LGP+SL  
Sbjct: 121 YHYVPGAKPVFISDDLSKIEKDVVVCFLVLAVRWISAS-RDFELLASLNADSLGPISLPW 179

Query: 73  LDGMD 59
            D +D
Sbjct: 180 SDEVD 184


>gb|EOY05895.1| DNA-directed RNA polymerase II subunit RPB7, putative isoform 1
           [Theobroma cacao] gi|508713999|gb|EOY05896.1|
           DNA-directed RNA polymerase II subunit RPB7, putative
           isoform 1 [Theobroma cacao] gi|508714000|gb|EOY05897.1|
           DNA-directed RNA polymerase II subunit RPB7, putative
           isoform 1 [Theobroma cacao]
          Length = 190

 Score =  147 bits (372), Expect = 2e-33
 Identities = 86/185 (46%), Positives = 112/185 (60%), Gaps = 1/185 (0%)
 Frame = -2

Query: 610 MLREVIFTFKVAVPVKNLDRNREVLTSVIANRLLKQLSNVKACE-YGYLLAVTKLISIGH 434
           M  EV     V V   NLD+   V    I   LL+ L   +A E +GY L+VT L SIG 
Sbjct: 6   MFSEVELQRDVKVHAGNLDKRGLVSQRSILVLLLEDLFKERASEDHGYFLSVTSLKSIGK 65

Query: 433 GDNVFSSQHILFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLMPN 254
           GD V  S +++F V   CR F P  GEV+ G+VH I  RGVFL+ GP+ + YLS+  MPN
Sbjct: 66  GDVVDESGNMVFTVVFTCRTFKPFKGEVLQGVVHHICHRGVFLRCGPVRIAYLSAWKMPN 125

Query: 253 YHYVSGESPAFVREDSSKIEIGVVIRYIVFAVKWIEDKWREFRVLASIDGDGLGPVSLNG 74
           YHYV G  P F+ +D SKIE  VV+ ++V AV+WI    R+F +LAS++ D LGP+SL  
Sbjct: 126 YHYVPGAKPVFISDDLSKIEKDVVVCFLVLAVRWISAS-RDFELLASLNADSLGPISLPW 184

Query: 73  LDGMD 59
            D +D
Sbjct: 185 SDEVD 189


>emb|CBI26363.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  140 bits (353), Expect = 3e-31
 Identities = 81/179 (45%), Positives = 107/179 (59%), Gaps = 1/179 (0%)
 Frame = -2

Query: 616 TVMLREVIFTFKVAVPVKNLDRNREVLTSVIANRLLKQLSNVKAC-EYGYLLAVTKLISI 440
           T M  +V   + V +P + LD    +L   I  RLL   SN KA  E GY LAVT L +I
Sbjct: 64  TEMFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENI 123

Query: 439 GHGDNVFSSQHILFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLM 260
           G G     S  +LFPV   C  F    GE++ G+VHK+   GV L+ GP+  +YLS + M
Sbjct: 124 GEGKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKM 183

Query: 259 PNYHYVSGESPAFVREDSSKIEIGVVIRYIVFAVKWIEDKWREFRVLASIDGDGLGPVS 83
           P+Y YV GE+P F+ E  SKIE  VV+R+IV   KW+E + REF+ L S++GD LGP+S
Sbjct: 184 PDYRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAE-REFQALVSLEGDYLGPLS 241


>ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
           vinifera] gi|147822056|emb|CAN61549.1| hypothetical
           protein VITISV_043525 [Vitis vinifera]
          Length = 177

 Score =  139 bits (350), Expect = 7e-31
 Identities = 80/177 (45%), Positives = 106/177 (59%), Gaps = 1/177 (0%)
 Frame = -2

Query: 610 MLREVIFTFKVAVPVKNLDRNREVLTSVIANRLLKQLSNVKAC-EYGYLLAVTKLISIGH 434
           M  +V   + V +P + LD    +L   I  RLL   SN KA  E GY LAVT L +IG 
Sbjct: 1   MFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENIGE 60

Query: 433 GDNVFSSQHILFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLMPN 254
           G     S  +LFPV   C  F    GE++ G+VHK+   GV L+ GP+  +YLS + MP+
Sbjct: 61  GKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKMPD 120

Query: 253 YHYVSGESPAFVREDSSKIEIGVVIRYIVFAVKWIEDKWREFRVLASIDGDGLGPVS 83
           Y YV GE+P F+ E  SKIE  VV+R+IV   KW+E + REF+ L S++GD LGP+S
Sbjct: 121 YRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAE-REFQALVSLEGDYLGPLS 176


>ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Cucumis sativus] gi|449522228|ref|XP_004168129.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB7-like [Cucumis sativus]
          Length = 175

 Score =  134 bits (337), Expect = 2e-29
 Identities = 78/177 (44%), Positives = 107/177 (60%), Gaps = 1/177 (0%)
 Frame = -2

Query: 610 MLREVIFTFKVAVPVKNLDRNREVLTSVIANRLLKQLSNVKAC-EYGYLLAVTKLISIGH 434
           M  +V   + V +P +NLD    +L   I  RLL + +  KA  + GY LAVT L +IG 
Sbjct: 1   MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGE 60

Query: 433 GDNVFSSQHILFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLMPN 254
           G  V  +  +LFPV      F    GE++ G+VHK+   GVFL+ GP+  +YLS   MP+
Sbjct: 61  G-KVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIYLSYLKMPD 119

Query: 253 YHYVSGESPAFVREDSSKIEIGVVIRYIVFAVKWIEDKWREFRVLASIDGDGLGPVS 83
           Y YV GE+P F+ +  SKIE  VV+R+IV   KW+E + REF+ L S++GD LGPVS
Sbjct: 120 YRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAE-REFQALVSLEGDYLGPVS 175


>ref|XP_004288440.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb7-like
           [Fragaria vesca subsp. vesca]
          Length = 188

 Score =  134 bits (336), Expect = 3e-29
 Identities = 77/180 (42%), Positives = 109/180 (60%), Gaps = 5/180 (2%)
 Frame = -2

Query: 610 MLREVIFTFKVAVPVKNLDRNREVLT-SVIANRLLKQLSNVKAC-EYGYLLAVTKLISIG 437
           M  EV     V V  + LD++    + SVI  +LLK L   KA  ++GY L VT L  +G
Sbjct: 1   MYSEVELVRGVVVLAEKLDKDSPFSSKSVITTQLLKDLLKEKASKDHGYFLKVTALKKVG 60

Query: 436 HGDNVFSSQHILFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLMP 257
            G  +  S+ +LF V   CR FIP+ GE++ G+V+K++  GVF++ GP++  YLS+R MP
Sbjct: 61  TGQILDHSRKMLFHVAFSCRTFIPLQGEILEGVVYKVHNLGVFIRCGPLNYAYLSARKMP 120

Query: 256 NYHYVSGESPAFVREDSSKIEIGVVIRYIVFAVKWI---EDKWREFRVLASIDGDGLGPV 86
           NYHYV+G  P F++ D +KIE  VV+R+ V   +W     +   EF VL S+ GD LGPV
Sbjct: 121 NYHYVAGTKPFFLKGDLAKIEKKVVVRFRVLHARWTAKSREIRNEFVVLGSMVGDSLGPV 180


>gb|EXB38410.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 202

 Score =  133 bits (335), Expect = 4e-29
 Identities = 84/202 (41%), Positives = 112/202 (55%), Gaps = 18/202 (8%)
 Frame = -2

Query: 610 MLREVIFTFKVAVPVKNLDRNREVLT--SVIANRLLKQLSNVKAC-EYGYLLAVTKLISI 440
           M  EV     V V  +N+  +  V    S I  RLL+ L   KA  ++GY LAVT L  I
Sbjct: 1   MFSEVELIRDVTVDAENIKSDGLVSRPQSFIMTRLLEDLVREKASKDHGYFLAVTSLKKI 60

Query: 439 GHGDNVFSSQHILFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLM 260
           G    V  S  + FPV   CR F+P +GE++ GIVH I   GVFL+ GP+   YLS+R M
Sbjct: 61  GKMKAVEESGDVFFPVVFNCRTFLPYEGEILQGIVHCIYRHGVFLRCGPIKYAYLSARKM 120

Query: 259 PNYHYVSGE-----------SPAFVREDSSKIEIGVVIRYIVFAVKWIEDKW----REFR 125
           P Y YV G+            P FV  + +KIE GVV+ ++V  V+W E+ W     EF 
Sbjct: 121 PGYQYVYGQKMACQKCGHDRKPLFVSNEFAKIENGVVVCFMVLGVRWFEN-WGNVKNEFG 179

Query: 124 VLASIDGDGLGPVSLNGLDGMD 59
           VLA+++GD LGP+SL+G   +D
Sbjct: 180 VLATLEGDSLGPISLSGSGELD 201


>ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
           [Ricinus communis] gi|223538083|gb|EEF39694.1|
           DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
           putative [Ricinus communis]
          Length = 176

 Score =  133 bits (335), Expect = 4e-29
 Identities = 76/177 (42%), Positives = 108/177 (61%), Gaps = 1/177 (0%)
 Frame = -2

Query: 610 MLREVIFTFKVAVPVKNLDRNREVLTSVIANRLLKQLSNVKAC-EYGYLLAVTKLISIGH 434
           M  +V   + V +  ++LD    +L   I  RLL+  ++ KA  + GY LAVT L SIG 
Sbjct: 1   MYLKVQLPWNVIISAEHLDAKGLMLQRSIIIRLLEDFASKKATKDLGYYLAVTTLESIGE 60

Query: 433 GDNVFSSQHILFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLMPN 254
           G     +  +LFPV      F    GE++ G+VHK+   GVF++ GP+  +YLS   MP+
Sbjct: 61  GKVREHTGDVLFPVVFNGITFKIFRGEILEGVVHKVLKHGVFIRCGPIENIYLSCMKMPD 120

Query: 253 YHYVSGESPAFVREDSSKIEIGVVIRYIVFAVKWIEDKWREFRVLASIDGDGLGPVS 83
           YHYV GE+P F+ + +SKIE  VV+R+IV   KW+E + REF+ L S++GD LGPVS
Sbjct: 121 YHYVPGENPVFLNDKTSKIEKDVVVRFIVIGTKWLEAE-REFQALVSLEGDYLGPVS 176


>ref|XP_006489790.1| PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Citrus
           sinensis]
          Length = 182

 Score =  132 bits (332), Expect = 8e-29
 Identities = 81/183 (44%), Positives = 106/183 (57%), Gaps = 2/183 (1%)
 Frame = -2

Query: 610 MLREVIFTFKVAVPVKNLDRNREVLTSVIANRLLKQLSNVKAC-EYGYLLAVTKLISIGH 434
           M  +V   + V VP +NLD    +L   I  RLL   +  KA  + GY LAVT L +IG 
Sbjct: 1   MFLKVKLPWNVVVPAENLDAKGPMLQRSIVVRLLDDFARRKATKDLGYFLAVTTLENIGE 60

Query: 433 GDNVFSSQHILFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLMPN 254
           G    ++  +LFPV      F    GEV+ G VHK+   GVFLK GP+  +YL+   MP+
Sbjct: 61  GRVRENTGEVLFPVVFSGITFKIFRGEVLDGTVHKVLKHGVFLKCGPVENIYLTCSKMPD 120

Query: 253 YHYVSGESPAFVREDSSKIEIGVVIRYIVFAVKWIEDKWREFRVLASIDGDGLGPVSL-N 77
           Y YV  E+P F+ E + KIE  VV+R IV   KW+E + REF+ L S++GD LGPVS  N
Sbjct: 121 YRYVQAENPVFLSEKNPKIEKDVVVRVIVIGTKWLEAE-REFQALVSLEGDFLGPVSCEN 179

Query: 76  GLD 68
            LD
Sbjct: 180 PLD 182


>ref|XP_006420614.1| hypothetical protein CICLE_v10006012mg [Citrus clementina]
           gi|557522487|gb|ESR33854.1| hypothetical protein
           CICLE_v10006012mg [Citrus clementina]
          Length = 182

 Score =  132 bits (332), Expect = 8e-29
 Identities = 81/183 (44%), Positives = 106/183 (57%), Gaps = 2/183 (1%)
 Frame = -2

Query: 610 MLREVIFTFKVAVPVKNLDRNREVLTSVIANRLLKQLSNVKAC-EYGYLLAVTKLISIGH 434
           M  +V   + V VP +NLD    +L   I  RLL   +  KA  + GY LAVT L +IG 
Sbjct: 1   MFLKVKLPWNVVVPAENLDAKGPMLQRSIVIRLLDDFARRKATKDLGYFLAVTTLENIGE 60

Query: 433 GDNVFSSQHILFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLMPN 254
           G    ++  +LFPV      F    GEV+ G VHK+   GVFLK GP+  +YL+   MP+
Sbjct: 61  GRVRENTGEVLFPVVFSGITFKIFRGEVLDGTVHKVLKHGVFLKCGPVENIYLTCSKMPD 120

Query: 253 YHYVSGESPAFVREDSSKIEIGVVIRYIVFAVKWIEDKWREFRVLASIDGDGLGPVSL-N 77
           Y YV  E+P F+ E + KIE  VV+R IV   KW+E + REF+ L S++GD LGPVS  N
Sbjct: 121 YRYVQAENPVFLSEKNPKIEKDVVVRVIVIGTKWLEAE-REFQALVSLEGDFLGPVSCEN 179

Query: 76  GLD 68
            LD
Sbjct: 180 PLD 182


>gb|EOY19674.1| RNA polymerase Rpb7-like, N-terminal domain [Theobroma cacao]
          Length = 176

 Score =  131 bits (330), Expect = 1e-28
 Identities = 77/177 (43%), Positives = 104/177 (58%), Gaps = 1/177 (0%)
 Frame = -2

Query: 610 MLREVIFTFKVAVPVKNLDRNREVLTSVIANRLLKQLSNVKAC-EYGYLLAVTKLISIGH 434
           M  +V   + V +P  +L     +L   I  RLL   +  KA  + GY +AVT L SIG 
Sbjct: 1   MFLKVQLPWNVIIPADSLGAKGLMLQKAIVVRLLDDFACKKATKDLGYFIAVTTLESIGD 60

Query: 433 GDNVFSSQHILFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLMPN 254
           G    ++  +LFPV      F    GE++ G+VHKI   GVFL+ GP+  +YLS   MP+
Sbjct: 61  GKVRQNTGDVLFPVVFSGITFKMFRGEILEGVVHKILKHGVFLRCGPVQNIYLSHLKMPD 120

Query: 253 YHYVSGESPAFVREDSSKIEIGVVIRYIVFAVKWIEDKWREFRVLASIDGDGLGPVS 83
           YHYV GE+  F+ E  SKIE  VV+R+IV   KW+E + REF+ L S++GD LGPVS
Sbjct: 121 YHYVPGENAIFMNEKHSKIEKDVVVRFIVIGTKWLEAE-REFQALVSLEGDYLGPVS 176


>ref|XP_002312568.1| RNA polymerase Rpb7 N-terminal domain-containing family protein
           [Populus trichocarpa] gi|222852388|gb|EEE89935.1| RNA
           polymerase Rpb7 N-terminal domain-containing family
           protein [Populus trichocarpa]
          Length = 176

 Score =  130 bits (326), Expect = 4e-28
 Identities = 75/177 (42%), Positives = 104/177 (58%), Gaps = 1/177 (0%)
 Frame = -2

Query: 610 MLREVIFTFKVAVPVKNLDRNREVLTSVIANRLLKQLSNVKAC-EYGYLLAVTKLISIGH 434
           M  +V   + V +P +NLD    +L   I  RLL   +   A  + GY LAV+ L SIG 
Sbjct: 1   MFLKVQLPWNVIIPAENLDAKGLMLQRSIVVRLLDDFAKKGATKDLGYYLAVSTLESIGE 60

Query: 433 GDNVFSSQHILFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLMPN 254
           G     +  +LFPV      F    GE++ GIVHK+   GV L+ GP+  +YLS   MP+
Sbjct: 61  GKVRQHTGDVLFPVVFSGITFKIFRGEILDGIVHKVLKHGVLLRCGPIENIYLSCMKMPD 120

Query: 253 YHYVSGESPAFVREDSSKIEIGVVIRYIVFAVKWIEDKWREFRVLASIDGDGLGPVS 83
           Y YV GE+P F+ + +SKIE  VV+R++V   KW+E + REF+ L S++GD LGPVS
Sbjct: 121 YRYVPGENPVFLNDKTSKIEKDVVVRFVVLGTKWLEAE-REFQALVSLEGDYLGPVS 176


>ref|XP_002868270.1| RNA polymerase Rpb7 N-terminal domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297314106|gb|EFH44529.1| RNA polymerase Rpb7
           N-terminal domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 178

 Score =  129 bits (325), Expect = 5e-28
 Identities = 71/177 (40%), Positives = 105/177 (59%), Gaps = 1/177 (0%)
 Frame = -2

Query: 610 MLREVIFTFKVAVPVKNLDRNREVLTSVIANRLLKQLSNVKAC-EYGYLLAVTKLISIGH 434
           M  +V   + V +P +N+D    +L   I   LL   ++ KA  E GY +AVT L  IG 
Sbjct: 1   MFLKVQLPWNVMIPAENMDAKGLILKRAILVELLDAFASKKATKELGYYVAVTTLDKIGE 60

Query: 433 GDNVFSSQHILFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLMPN 254
           G     +  +LFPV      F    GE++ G+VHK+   GVF++ GP+  VYLS   MP+
Sbjct: 61  GKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCGPIENVYLSYTKMPD 120

Query: 253 YHYVSGESPAFVREDSSKIEIGVVIRYIVFAVKWIEDKWREFRVLASIDGDGLGPVS 83
           Y YV GE+P F+ E +S+I++   +R +V  +KW+E + REF+ LAS++GD LGP+S
Sbjct: 121 YKYVPGENPIFMNEKTSRIQVETTVRVVVIGIKWMEAE-REFQALASLEGDYLGPLS 176


>ref|NP_193202.2| DNA-directed RNA polymerase V subunit NRPE7 [Arabidopsis thaliana]
           gi|544604203|sp|A6QRA1.1|NRPE7_ARATH RecName:
           Full=DNA-directed RNA polymerase V subunit 7
           gi|149944323|gb|ABR46204.1| At4g14660 [Arabidopsis
           thaliana] gi|332658072|gb|AEE83472.1| DNA-directed RNA
           polymerase V subunit NRPE7 [Arabidopsis thaliana]
          Length = 178

 Score =  129 bits (323), Expect = 9e-28
 Identities = 70/177 (39%), Positives = 106/177 (59%), Gaps = 1/177 (0%)
 Frame = -2

Query: 610 MLREVIFTFKVAVPVKNLDRNREVLTSVIANRLLKQLSNVKAC-EYGYLLAVTKLISIGH 434
           M  +V   + V +P +N+D    +L   I   LL+  ++ KA  E GY +AVT L  IG 
Sbjct: 1   MFLKVQLPWNVMIPAENMDAKGLMLKRAILVELLEAFASKKATKELGYYVAVTTLDKIGE 60

Query: 433 GDNVFSSQHILFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLMPN 254
           G     +  +LFPV      F    GE++ G+VHK+   GVF++ GP+  VYLS   MP+
Sbjct: 61  GKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCGPIENVYLSYTKMPD 120

Query: 253 YHYVSGESPAFVREDSSKIEIGVVIRYIVFAVKWIEDKWREFRVLASIDGDGLGPVS 83
           Y Y+ GE+P F+ E +S+I++   +R +V  +KW+E + REF+ LAS++GD LGP+S
Sbjct: 121 YKYIPGENPIFMNEKTSRIQVETTVRVVVIGIKWMEVE-REFQALASLEGDYLGPLS 176


>gb|EOY19671.1| RNA polymerase Rpb7-like, N-terminal domain isoform 1 [Theobroma
           cacao] gi|508727775|gb|EOY19672.1| RNA polymerase
           Rpb7-like, N-terminal domain isoform 2, partial
           [Theobroma cacao]
          Length = 176

 Score =  128 bits (322), Expect = 1e-27
 Identities = 75/177 (42%), Positives = 103/177 (58%), Gaps = 1/177 (0%)
 Frame = -2

Query: 610 MLREVIFTFKVAVPVKNLDRNREVLTSVIANRLLKQLSNVKAC-EYGYLLAVTKLISIGH 434
           M  +V   + V +P  +L     +L   I   LL   +  KA  + GY +AVT L SIG 
Sbjct: 1   MFLKVQLPWNVIIPADSLGAKGLMLQKAIVVHLLDDFACKKATKDLGYFIAVTTLESIGD 60

Query: 433 GDNVFSSQHILFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLMPN 254
           G    ++  +LFPV      F    GE++ G+VHKI   GVFL+ GP+  +YLS   MP+
Sbjct: 61  GKVRQNTGDVLFPVVFSGITFKMFRGEILEGVVHKILKHGVFLRCGPVQNIYLSHLKMPD 120

Query: 253 YHYVSGESPAFVREDSSKIEIGVVIRYIVFAVKWIEDKWREFRVLASIDGDGLGPVS 83
           YHYV GE+  F+ +  SKIE  VV+R+IV   KW+E + REF+ L S++GD LGPVS
Sbjct: 121 YHYVPGENAIFMNDKHSKIEKDVVVRFIVIGTKWLEAE-REFQALVSLEGDYLGPVS 176


>ref|XP_004288438.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like isoform
           1 [Fragaria vesca subsp. vesca]
           gi|470104073|ref|XP_004288439.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB7-like isoform 2 [Fragaria
           vesca subsp. vesca]
          Length = 187

 Score =  128 bits (321), Expect = 2e-27
 Identities = 72/169 (42%), Positives = 100/169 (59%), Gaps = 1/169 (0%)
 Frame = -2

Query: 586 FKVAVPVKNLDRNREVLTSVIANRLLKQLSNVKAC-EYGYLLAVTKLISIGHGDNVFSSQ 410
           + V +P ++LD    +L   I  RLL   +  KA  + GYLLA+T +  IG G     + 
Sbjct: 9   WNVVIPAESLDAKGLMLQKAIIVRLLDDFAERKATKDLGYLLALTTVEKIGEGKVRQHTG 68

Query: 409 HILFPVDVCCRIFIPVDGEVMTGIVHKINARGVFLKSGPMSMVYLSSRLMPNYHYVSGES 230
            +LFPV      F    GE++ G+VHK+  +GV L+ GP+  VYLSS  MP+Y+YV GE+
Sbjct: 69  DVLFPVTFSAISFKLFRGEILKGVVHKVLKQGVILRCGPIENVYLSSSKMPDYNYVPGEN 128

Query: 229 PAFVREDSSKIEIGVVIRYIVFAVKWIEDKWREFRVLASIDGDGLGPVS 83
           P F+   SSKIE G  +R+IV   KW+E + REF+ L  +  D LGPVS
Sbjct: 129 PIFLNAKSSKIEKGTTLRFIVIGAKWLEAE-REFQALVGLHADYLGPVS 176