BLASTX nr result

ID: Rehmannia22_contig00026001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00026001
         (344 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY12921.1| F-box/RNI/FBD-like domains-containing protein, pu...    65   1e-08
gb|AFK43402.1| unknown [Medicago truncatula]                           59   5e-07
ref|XP_003628590.1| F-box family protein [Medicago truncatula] g...    59   5e-07
ref|XP_006405731.1| hypothetical protein EUTSA_v10028200mg [Eutr...    57   2e-06
ref|XP_004289024.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    57   2e-06
ref|XP_003628566.1| F-box/LRR-repeat protein [Medicago truncatul...    57   3e-06
ref|XP_004509921.1| PREDICTED: FBD-associated F-box protein At4g...    57   3e-06
ref|XP_004501777.1| PREDICTED: F-box/FBD/LRR-repeat protein At3g...    56   4e-06
gb|EMJ12792.1| hypothetical protein PRUPE_ppa005417mg [Prunus pe...    56   6e-06

>gb|EOY12921.1| F-box/RNI/FBD-like domains-containing protein, putative [Theobroma
           cacao]
          Length = 449

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3   PKQVPKCLISHLTIIRIDGMGCTKQEFDMVRYLLRNALVLKKMEI-FSGPNAIDFEAKFN 179
           PK VPKCL+S LT++   G      +  +V+++L+NA VLK MEI  +G +    ++KF+
Sbjct: 370 PKSVPKCLLSPLTLVYFRGFEGLTYQLRVVKFILKNARVLKMMEICTNGISDPPSDSKFD 429

Query: 180 ALQRISLFQRGSVACELAF 236
            L+++ +F RGS ACEL F
Sbjct: 430 MLRKLLMFPRGSKACELQF 448


>gb|AFK43402.1| unknown [Medicago truncatula]
          Length = 211

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/75 (42%), Positives = 46/75 (61%)
 Frame = +3

Query: 12  VPKCLISHLTIIRIDGMGCTKQEFDMVRYLLRNALVLKKMEIFSGPNAIDFEAKFNALQR 191
           VPKCL S+LT I I+G    +++     Y+LRN LVL  M IF    ++D   K+ +L+R
Sbjct: 132 VPKCLESNLTYIHIEGYQGFEEDLAFAEYILRNGLVLHTMLIFF-DTSMDLTNKYRSLKR 190

Query: 192 ISLFQRGSVACELAF 236
           ++   RGSV C+L F
Sbjct: 191 LTDIPRGSVTCQLKF 205


>ref|XP_003628590.1| F-box family protein [Medicago truncatula]
           gi|355522612|gb|AET03066.1| F-box family protein
           [Medicago truncatula]
          Length = 420

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/79 (41%), Positives = 48/79 (60%)
 Frame = +3

Query: 12  VPKCLISHLTIIRIDGMGCTKQEFDMVRYLLRNALVLKKMEIFSGPNAIDFEAKFNALQR 191
           VP+CLISHL  I I+G    + E     ++LRN LVL+ M IF    ++D   K+ +++R
Sbjct: 340 VPRCLISHLKYICIEGYQGFEDELTFAEFILRNGLVLETMLIFV-DISLDITNKYRSIKR 398

Query: 192 ISLFQRGSVACELAFF*DC 248
           ++   RGSV C+L F  DC
Sbjct: 399 LTNIPRGSVTCQLNF--DC 415


>ref|XP_006405731.1| hypothetical protein EUTSA_v10028200mg [Eutrema salsugineum]
           gi|557106869|gb|ESQ47184.1| hypothetical protein
           EUTSA_v10028200mg [Eutrema salsugineum]
          Length = 394

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/78 (39%), Positives = 47/78 (60%)
 Frame = +3

Query: 3   PKQVPKCLISHLTIIRIDGMGCTKQEFDMVRYLLRNALVLKKMEIFSGPNAIDFEAKFNA 182
           P  VP+C++S L  +   G   TK+E ++V ++LRN   LKK+ I S  N  D + KF  
Sbjct: 318 PSSVPECVLSSLETLEWVGYEGTKEEKEVVGFMLRNGSCLKKVTISSNSN--DRDKKFEM 375

Query: 183 LQRISLFQRGSVACELAF 236
           ++ ++LF R S  C+LAF
Sbjct: 376 MKELTLFIRRSPTCQLAF 393


>ref|XP_004289024.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At3g56780-like
           [Fragaria vesca subsp. vesca]
          Length = 385

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/76 (38%), Positives = 46/76 (60%)
 Frame = +3

Query: 3   PKQVPKCLISHLTIIRIDGMGCTKQEFDMVRYLLRNALVLKKMEIFSGPNAIDFEAKFNA 182
           P+ VP CL+SH+  I I G G    EF + +YLL+N  VL  M+I++     D +     
Sbjct: 304 PELVPNCLLSHVKTICIIGFGGKDDEFKIAKYLLKNGEVLNSMKIYT-----DGDLCAKK 358

Query: 183 LQRISLFQRGSVACEL 230
           L+++S+F+RGS  C++
Sbjct: 359 LEKLSMFERGSKTCKV 374


>ref|XP_003628566.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355522588|gb|AET03042.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 542

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/75 (42%), Positives = 45/75 (60%)
 Frame = +3

Query: 12  VPKCLISHLTIIRIDGMGCTKQEFDMVRYLLRNALVLKKMEIFSGPNAIDFEAKFNALQR 191
           VP+CL SHLT I I+G    + E     YLLRN LVL+ M IF    ++    K+ +++R
Sbjct: 356 VPECLKSHLTYIHIEGYQGFEDELTFAEYLLRNGLVLQTMLIFV-DTSMHTTNKYLSVKR 414

Query: 192 ISLFQRGSVACELAF 236
           ++   RGSV C+L F
Sbjct: 415 LTDIPRGSVTCQLKF 429


>ref|XP_004509921.1| PREDICTED: FBD-associated F-box protein At4g10400-like [Cicer
           arietinum]
          Length = 451

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/75 (42%), Positives = 43/75 (57%)
 Frame = +3

Query: 12  VPKCLISHLTIIRIDGMGCTKQEFDMVRYLLRNALVLKKMEIFSGPNAIDFEAKFNALQR 191
           VPKCL S L  I I G    + E     Y+LRN LVLK M IF    ++D   K+ +L+R
Sbjct: 372 VPKCLKSQLNYIHIKGYQGFEDELTFAEYILRNGLVLKTMLIFV-DTSMDKNNKYLSLKR 430

Query: 192 ISLFQRGSVACELAF 236
           ++   +GSV C+L F
Sbjct: 431 LAAVPKGSVTCQLKF 445


>ref|XP_004501777.1| PREDICTED: F-box/FBD/LRR-repeat protein At3g26920-like [Cicer
           arietinum]
          Length = 239

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/77 (40%), Positives = 42/77 (54%)
 Frame = +3

Query: 6   KQVPKCLISHLTIIRIDGMGCTKQEFDMVRYLLRNALVLKKMEIFSGPNAIDFEAKFNAL 185
           K VP+CL+SHLT   +     TK E    +Y+++N+ VL  MEI    N ID   K   L
Sbjct: 163 KTVPECLLSHLTTCSLRNYTHTKSELQFAKYVMQNSRVLNTMEIHCA-NFIDTYTKLQML 221

Query: 186 QRISLFQRGSVACELAF 236
             +SL  R S  C+L+F
Sbjct: 222 MELSLCPRISATCKLSF 238


>gb|EMJ12792.1| hypothetical protein PRUPE_ppa005417mg [Prunus persica]
          Length = 462

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3   PKQVPKCLISHLTIIRIDGMGCTKQEFDMVRYLLRNALVLKKMEIFSGPNAIDF-EAKFN 179
           P  VP CL+SHL  + I G      E +  +YLL N  VL+KM I++G    DF  AK  
Sbjct: 374 PDFVPICLVSHLKTVSIRGFQGHLHEREAAKYLLENGEVLRKMTIYTG----DFLPAKEK 429

Query: 180 ALQRISLFQRGSVACELAF 236
             +  S+FQRGS  C++ F
Sbjct: 430 IYKEFSMFQRGSRTCQVEF 448


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