BLASTX nr result
ID: Rehmannia22_contig00025588
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00025588
(503 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN80997.1| hypothetical protein VITISV_035892 [Vitis vinifera] 75 4e-21
emb|CAE01642.2| OSJNBb0021I10.5 [Oryza sativa Japonica Group] 68 8e-21
gb|AAM74384.1|AC116603_20 Putative retroelement [Oryza sativa Ja... 74 1e-20
gb|ABB46842.1| retrotransposon protein, putative, Ty3-gypsy subc... 74 1e-20
gb|ABF97600.1| retrotransposon protein, putative, Ty3-gypsy subc... 67 4e-20
gb|AAR00600.1| putative reverse transcriptase [Oryza sativa Japo... 67 4e-20
gb|ABG37668.1| gag protein [Populus trichocarpa] 96 5e-18
gb|ABG37657.1| integrase [Populus trichocarpa] 96 5e-18
gb|ABG37658.1| integrase [Populus trichocarpa] 92 9e-17
emb|CAN64762.1| hypothetical protein VITISV_033533 [Vitis vinifera] 79 6e-13
emb|CAN61848.1| hypothetical protein VITISV_016506 [Vitis vinifera] 77 2e-12
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis] 76 4e-12
gb|ABD63145.1| F7F22.17, putative [Asparagus officinalis] 76 4e-12
ref|XP_003634055.1| PREDICTED: uncharacterized protein LOC100854... 76 4e-12
ref|XP_003631317.1| PREDICTED: uncharacterized protein LOC100852... 75 1e-11
ref|XP_003632215.1| PREDICTED: uncharacterized protein LOC100852... 74 2e-11
emb|CAN62418.1| hypothetical protein VITISV_007452 [Vitis vinifera] 74 2e-11
gb|AAX95925.1| retrotransposon protein, putative, Ty3-gypsy sub-... 74 2e-11
emb|CAN66443.1| hypothetical protein VITISV_011562 [Vitis vinifera] 74 3e-11
emb|CAN64595.1| hypothetical protein VITISV_035063 [Vitis vinifera] 74 3e-11
>emb|CAN80997.1| hypothetical protein VITISV_035892 [Vitis vinifera]
Length = 1020
Score = 74.7 bits (182), Expect(3) = 4e-21
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = +2
Query: 254 LPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFEW 391
LP+P +VK VR FLGHAGFYRRFIKDFS +SKPLC LL KD F W
Sbjct: 876 LPSPTTVKGVRQFLGHAGFYRRFIKDFSKLSKPLCELLAKDAKFIW 921
Score = 48.1 bits (113), Expect(3) = 4e-21
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +1
Query: 382 F*MDKNCENAFVKLKSMLTSAPIIQPPDWTLPFEIMCDAS 501
F D+ C+ +F L LT+ I++ P+W LPFE+MCDAS
Sbjct: 919 FIWDERCQKSFDPLNQFLTTTSIVRAPNWQLPFEVMCDAS 958
Score = 23.9 bits (50), Expect(3) = 4e-21
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3
Query: 210 KRIEVDKSKVELI 248
K +EVDK+KVELI
Sbjct: 861 KSVEVDKAKVELI 873
>emb|CAE01642.2| OSJNBb0021I10.5 [Oryza sativa Japonica Group]
Length = 1489
Score = 68.2 bits (165), Expect(2) = 8e-21
Identities = 31/46 (67%), Positives = 37/46 (80%)
Frame = +2
Query: 254 LPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFEW 391
LP P ++K +RSFLGHAGFYRRFIKDFS I++P NLL KD FE+
Sbjct: 608 LPHPVNIKGIRSFLGHAGFYRRFIKDFSTIARPPTNLLAKDAPFEF 653
Score = 57.8 bits (138), Expect(2) = 8e-21
Identities = 27/40 (67%), Positives = 28/40 (70%)
Frame = +1
Query: 382 F*MDKNCENAFVKLKSMLTSAPIIQPPDWTLPFEIMCDAS 501
F D C +F LK L APIIQPPDWTLPFEIMCDAS
Sbjct: 651 FEFDDACLKSFEILKKALVPAPIIQPPDWTLPFEIMCDAS 690
>gb|AAM74384.1|AC116603_20 Putative retroelement [Oryza sativa Japonica Group]
Length = 667
Score = 73.6 bits (179), Expect(2) = 1e-20
Identities = 34/46 (73%), Positives = 38/46 (82%)
Frame = +2
Query: 254 LPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFEW 391
LP P S+K +RSFLGHAGFYRRFIKDFS I +PL NLL KDV FE+
Sbjct: 546 LPPPVSIKGIRSFLGHAGFYRRFIKDFSTIGRPLTNLLVKDVPFEF 591
Score = 51.6 bits (122), Expect(2) = 1e-20
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +1
Query: 382 F*MDKNCENAFVKLKSMLTSAPIIQPPDWTLPFEIMCDA 498
F + C N+F LK SAPIIQPPD TLPFEIMCDA
Sbjct: 589 FEFNDECLNSFEILKKAPVSAPIIQPPDGTLPFEIMCDA 627
>gb|ABB46842.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 490
Score = 73.6 bits (179), Expect(2) = 1e-20
Identities = 34/46 (73%), Positives = 38/46 (82%)
Frame = +2
Query: 254 LPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFEW 391
LP P S+K +RSFLGHAGFYRRFIKDFS I +PL NLL KDV FE+
Sbjct: 369 LPPPVSIKGIRSFLGHAGFYRRFIKDFSTIGRPLTNLLVKDVPFEF 414
Score = 51.6 bits (122), Expect(2) = 1e-20
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +1
Query: 382 F*MDKNCENAFVKLKSMLTSAPIIQPPDWTLPFEIMCDA 498
F + C N+F LK SAPIIQPPD TLPFEIMCDA
Sbjct: 412 FEFNDECLNSFEILKKAPVSAPIIQPPDGTLPFEIMCDA 450
>gb|ABF97600.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1300
Score = 67.0 bits (162), Expect(2) = 4e-20
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +2
Query: 263 PKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFE 388
P ++K +RSFLGHAGFYRRFIKDFS I++PL NLL KD FE
Sbjct: 696 PVNIKGIRSFLGHAGFYRRFIKDFSTIARPLTNLLAKDAPFE 737
Score = 56.6 bits (135), Expect(2) = 4e-20
Identities = 27/40 (67%), Positives = 28/40 (70%)
Frame = +1
Query: 382 F*MDKNCENAFVKLKSMLTSAPIIQPPDWTLPFEIMCDAS 501
F D C +F LK L SAPIIQPPDWTL FEIMCDAS
Sbjct: 736 FESDDACLKSFEVLKKALVSAPIIQPPDWTLSFEIMCDAS 775
>gb|AAR00600.1| putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 743
Score = 67.0 bits (162), Expect(2) = 4e-20
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +2
Query: 263 PKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFE 388
P ++K +RSFLGHAGFYRRFIKDFS I++PL NLL KD FE
Sbjct: 139 PVNIKGIRSFLGHAGFYRRFIKDFSTIARPLTNLLAKDAPFE 180
Score = 56.6 bits (135), Expect(2) = 4e-20
Identities = 27/40 (67%), Positives = 28/40 (70%)
Frame = +1
Query: 382 F*MDKNCENAFVKLKSMLTSAPIIQPPDWTLPFEIMCDAS 501
F D C +F LK L SAPIIQPPDWTL FEIMCDAS
Sbjct: 179 FESDDACLKSFEVLKKALVSAPIIQPPDWTLSFEIMCDAS 218
>gb|ABG37668.1| gag protein [Populus trichocarpa]
Length = 1886
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/66 (69%), Positives = 52/66 (78%)
Frame = +2
Query: 251 NLPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFEWTKIVKMLLSNLKA 430
NLP PKSVK+VRSFLGHAGFYRRFIKDFS+ISKPLCNLLTK+ FEWT+ + LK+
Sbjct: 1310 NLPTPKSVKDVRSFLGHAGFYRRFIKDFSVISKPLCNLLTKENVFEWTEQCEKAFVKLKS 1369
Query: 431 CLHLPP 448
L P
Sbjct: 1370 LLTSAP 1375
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/66 (69%), Positives = 52/66 (78%)
Frame = +2
Query: 251 NLPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFEWTKIVKMLLSNLKA 430
NLP PKSVK+VRSFLGHAGFYRRFIKDFS+ISKPLCNLLTK+ FEWT+ + LK+
Sbjct: 1546 NLPTPKSVKDVRSFLGHAGFYRRFIKDFSVISKPLCNLLTKENVFEWTEQCEKAFVKLKS 1605
Query: 431 CLHLPP 448
L P
Sbjct: 1606 LLTSAP 1611
Score = 85.9 bits (211), Expect = 5e-15
Identities = 53/127 (41%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Frame = +1
Query: 136 EELLLNWEKYHFMVTTVIVLGHILI-KGLR*TNPKLS*LQSTST--KISEGSKIIFRACW 306
+ L+LNW+K HFMVT IVLGHI+ K + K+ + + T + + + A +
Sbjct: 1270 KNLILNWKKCHFMVTNGIVLGHIVSSKRIEVDKSKIELIANLPTPKSVKDVRSFLGHAGF 1329
Query: 307 F--L*KIYQRL*YNI*TFV*SSNKRCWF*MDKNCENAFVKLKSMLTSAPIIQPPDWTLPF 480
+ K + + + + N W + CE AFVKLKS+LTSAP+IQPPDW+LPF
Sbjct: 1330 YRRFIKDFSVISKPLCNLLTKENVFEW---TEQCEKAFVKLKSLLTSAPVIQPPDWSLPF 1386
Query: 481 EIMCDAS 501
EIMCDAS
Sbjct: 1387 EIMCDAS 1393
Score = 85.9 bits (211), Expect = 5e-15
Identities = 53/127 (41%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Frame = +1
Query: 136 EELLLNWEKYHFMVTTVIVLGHILI-KGLR*TNPKLS*LQSTST--KISEGSKIIFRACW 306
+ L+LNW+K HFMVT IVLGHI+ K + K+ + + T + + + A +
Sbjct: 1506 KNLILNWKKCHFMVTNGIVLGHIVSSKRIEVDKSKIELIANLPTPKSVKDVRSFLGHAGF 1565
Query: 307 F--L*KIYQRL*YNI*TFV*SSNKRCWF*MDKNCENAFVKLKSMLTSAPIIQPPDWTLPF 480
+ K + + + + N W + CE AFVKLKS+LTSAP+IQPPDW+LPF
Sbjct: 1566 YRRFIKDFSVISKPLCNLLTKENVFEW---TEQCEKAFVKLKSLLTSAPVIQPPDWSLPF 1622
Query: 481 EIMCDAS 501
EIMCDAS
Sbjct: 1623 EIMCDAS 1629
>gb|ABG37657.1| integrase [Populus trichocarpa]
Length = 1738
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/66 (69%), Positives = 52/66 (78%)
Frame = +2
Query: 251 NLPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFEWTKIVKMLLSNLKA 430
NLP PKSVK+VRSFLGHAGFYRRFIKDFS+ISKPLCNLLTK+ FEWT+ + LK+
Sbjct: 1162 NLPTPKSVKDVRSFLGHAGFYRRFIKDFSVISKPLCNLLTKENVFEWTEQCEKAFVKLKS 1221
Query: 431 CLHLPP 448
L P
Sbjct: 1222 LLTSAP 1227
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/66 (69%), Positives = 52/66 (78%)
Frame = +2
Query: 251 NLPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFEWTKIVKMLLSNLKA 430
NLP PKSVK+VRSFLGHAGFYRRFIKDFS+ISKPLCNLLTK+ FEWT+ + LK+
Sbjct: 1398 NLPTPKSVKDVRSFLGHAGFYRRFIKDFSVISKPLCNLLTKENVFEWTEQCEKAFVKLKS 1457
Query: 431 CLHLPP 448
L P
Sbjct: 1458 LLTSAP 1463
Score = 85.9 bits (211), Expect = 5e-15
Identities = 53/127 (41%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Frame = +1
Query: 136 EELLLNWEKYHFMVTTVIVLGHILI-KGLR*TNPKLS*LQSTST--KISEGSKIIFRACW 306
+ L+LNW+K HFMVT IVLGHI+ K + K+ + + T + + + A +
Sbjct: 1122 KNLILNWKKCHFMVTNGIVLGHIVSSKRIEVDKSKIELIANLPTPKSVKDVRSFLGHAGF 1181
Query: 307 F--L*KIYQRL*YNI*TFV*SSNKRCWF*MDKNCENAFVKLKSMLTSAPIIQPPDWTLPF 480
+ K + + + + N W + CE AFVKLKS+LTSAP+IQPPDW+LPF
Sbjct: 1182 YRRFIKDFSVISKPLCNLLTKENVFEW---TEQCEKAFVKLKSLLTSAPVIQPPDWSLPF 1238
Query: 481 EIMCDAS 501
EIMCDAS
Sbjct: 1239 EIMCDAS 1245
Score = 85.9 bits (211), Expect = 5e-15
Identities = 53/127 (41%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Frame = +1
Query: 136 EELLLNWEKYHFMVTTVIVLGHILI-KGLR*TNPKLS*LQSTST--KISEGSKIIFRACW 306
+ L+LNW+K HFMVT IVLGHI+ K + K+ + + T + + + A +
Sbjct: 1358 KNLILNWKKCHFMVTNGIVLGHIVSSKRIEVDKSKIELIANLPTPKSVKDVRSFLGHAGF 1417
Query: 307 F--L*KIYQRL*YNI*TFV*SSNKRCWF*MDKNCENAFVKLKSMLTSAPIIQPPDWTLPF 480
+ K + + + + N W + CE AFVKLKS+LTSAP+IQPPDW+LPF
Sbjct: 1418 YRRFIKDFSVISKPLCNLLTKENVFEW---TEQCEKAFVKLKSLLTSAPVIQPPDWSLPF 1474
Query: 481 EIMCDAS 501
EIMCDAS
Sbjct: 1475 EIMCDAS 1481
>gb|ABG37658.1| integrase [Populus trichocarpa]
Length = 1139
Score = 91.7 bits (226), Expect = 9e-17
Identities = 46/66 (69%), Positives = 50/66 (75%)
Frame = +2
Query: 251 NLPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFEWTKIVKMLLSNLKA 430
NLP PKSVK+VRSFLGHAGFYRRFIKDFS+ISKPL NLLTKD FEWT+ + LK
Sbjct: 565 NLPTPKSVKDVRSFLGHAGFYRRFIKDFSVISKPLSNLLTKDNIFEWTEHCEEAFVKLKN 624
Query: 431 CLHLPP 448
L P
Sbjct: 625 LLTSAP 630
Score = 88.6 bits (218), Expect = 8e-16
Identities = 53/127 (41%), Positives = 76/127 (59%), Gaps = 5/127 (3%)
Frame = +1
Query: 136 EELLLNWEKYHFMVTTVIVLGHILI-KGLR*TNPKLS*LQSTST--KISEGSKIIFRACW 306
+ L+LNWEK HFMVT IVLGHI+ KG+ K+ + + T + + + A +
Sbjct: 525 KNLVLNWEKCHFMVTNGIVLGHIVSSKGIEVDKSKIELIANLPTPKSVKDVRSFLGHAGF 584
Query: 307 F--L*KIYQRL*YNI*TFV*SSNKRCWF*MDKNCENAFVKLKSMLTSAPIIQPPDWTLPF 480
+ K + + + + N W ++CE AFVKLK++LTSAP++QPPDW+LPF
Sbjct: 585 YRRFIKDFSVISKPLSNLLTKDNIFEW---TEHCEEAFVKLKNLLTSAPVVQPPDWSLPF 641
Query: 481 EIMCDAS 501
EIMCDAS
Sbjct: 642 EIMCDAS 648
>emb|CAN64762.1| hypothetical protein VITISV_033533 [Vitis vinifera]
Length = 1918
Score = 79.0 bits (193), Expect = 6e-13
Identities = 39/65 (60%), Positives = 43/65 (66%)
Frame = +2
Query: 254 LPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFEWTKIVKMLLSNLKAC 433
LP P +VK +R FLGHAGFYRRFIKDFS ISKPLC LL KDV F W + + LK
Sbjct: 1402 LPPPTNVKGIRQFLGHAGFYRRFIKDFSKISKPLCELLVKDVKFVWDEKCQKSFEELKQF 1461
Query: 434 LHLPP 448
L P
Sbjct: 1462 LTTAP 1466
Score = 71.6 bits (174), Expect = 1e-10
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Frame = +1
Query: 130 IGEELLLNWEKYHFMVTTVIVLGHILIKG---LR*TNPKLS*LQSTSTKISEGSKIIFRA 300
I ++L+LNWEK HFMV IVLGHI+ K + +L T + + + A
Sbjct: 1359 IEKDLVLNWEKCHFMVQQGIVLGHIISKNDIEVDKAKVELIVKLPPPTNVKGIRQFLGHA 1418
Query: 301 CWF--L*KIYQRL*YNI*TFV*SSNKRCWF*MDKNCENAFVKLKSMLTSAPIIQPPDWTL 474
++ K + ++ + + K W D+ C+ +F +LK LT+API++ P+W L
Sbjct: 1419 GFYRRFIKDFSKISKPLCELLVKDVKFVW---DEKCQKSFEELKQFLTTAPIVRAPNWKL 1475
Query: 475 PFEIMCDAS 501
PFE+MCDAS
Sbjct: 1476 PFEVMCDAS 1484
>emb|CAN61848.1| hypothetical protein VITISV_016506 [Vitis vinifera]
Length = 728
Score = 77.4 bits (189), Expect = 2e-12
Identities = 38/65 (58%), Positives = 42/65 (64%)
Frame = +2
Query: 254 LPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFEWTKIVKMLLSNLKAC 433
LP P +VK +R FLGHAGFYRRFIKDFS ISKPLC LL KD F W + + LK
Sbjct: 78 LPPPTNVKGIRQFLGHAGFYRRFIKDFSKISKPLCELLVKDAKFVWDEKCQKSFEELKKF 137
Query: 434 LHLPP 448
L P
Sbjct: 138 LTTAP 142
Score = 76.3 bits (186), Expect = 4e-12
Identities = 46/129 (35%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Frame = +1
Query: 130 IGEELLLNWEKYHFMVTTVIVLGHILIK-GLR*TNPKLS*LQSTS--TKISEGSKIIFRA 300
I ++L+LNWEK+HFMV IVLGHI+ K G+ K+ + T + + + A
Sbjct: 35 IEKDLVLNWEKFHFMVQQGIVLGHIISKNGIEVDKAKVELIVKLPPPTNVKGIRQFLGHA 94
Query: 301 CWF--L*KIYQRL*YNI*TFV*SSNKRCWF*MDKNCENAFVKLKSMLTSAPIIQPPDWTL 474
++ K + ++ + + K W D+ C+ +F +LK LT+API++ P+W L
Sbjct: 95 GFYRRFIKDFSKISKPLCELLVKDAKFVW---DEKCQKSFEELKKFLTTAPIVRAPNWKL 151
Query: 475 PFEIMCDAS 501
PFE+MCDAS
Sbjct: 152 PFEVMCDAS 160
>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
Length = 1788
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = +2
Query: 251 NLPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGF 385
NLP PK+VK+VRSFLGHAGFYRRFIKDFS I++PL NLL KD F
Sbjct: 1072 NLPPPKTVKDVRSFLGHAGFYRRFIKDFSKIARPLTNLLAKDTSF 1116
Score = 66.2 bits (160), Expect = 4e-09
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Frame = +1
Query: 136 EELLLNWEKYHFMVTTVIVLGHILI-KGLR*TNPKLS*LQSTSTK--ISEGSKIIFRACW 306
+ L LNWEK HFMV IVLGH++ +G+ K+ + + + + + A +
Sbjct: 1032 KNLTLNWEKCHFMVKQGIVLGHVVSNRGIEVDKAKVDIISNLPPPKTVKDVRSFLGHAGF 1091
Query: 307 F--L*KIYQRL*YNI*TFV*SSNKRCWF*MDKNCENAFVKLKSMLTSAPIIQPPDWTLPF 480
+ K + ++ + + K F +C AF LK LT+APII PDWTLPF
Sbjct: 1092 YRRFIKDFSKIARPLTNLL---AKDTSFVFSPDCLKAFEYLKKELTTAPIIHAPDWTLPF 1148
Query: 481 EIMCDAS 501
E+MCDAS
Sbjct: 1149 ELMCDAS 1155
>gb|ABD63145.1| F7F22.17, putative [Asparagus officinalis]
Length = 680
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = +2
Query: 251 NLPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGF 385
NLP PK+VK+VRSFLGHAGFYRRFIKDFS I++PL NLL KD F
Sbjct: 377 NLPPPKTVKDVRSFLGHAGFYRRFIKDFSKIARPLTNLLAKDTSF 421
Score = 66.2 bits (160), Expect = 4e-09
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Frame = +1
Query: 136 EELLLNWEKYHFMVTTVIVLGHILI-KGLR*TNPKLS*LQSTSTK--ISEGSKIIFRACW 306
+ L LNWEK HFMV IVLGH++ +G+ K+ + + + + + A +
Sbjct: 337 KNLTLNWEKCHFMVKQGIVLGHVVSNRGIEVDKAKVDIISNLPPPKTVKDVRSFLGHAGF 396
Query: 307 F--L*KIYQRL*YNI*TFV*SSNKRCWF*MDKNCENAFVKLKSMLTSAPIIQPPDWTLPF 480
+ K + ++ + + K F +C AF LK LT+APII PDWTLPF
Sbjct: 397 YRRFIKDFSKIARPLTNLL---AKDTSFVFSPDCLKAFEYLKKELTTAPIIHAPDWTLPF 453
Query: 481 EIMCDAS 501
E+MCDAS
Sbjct: 454 ELMCDAS 460
>ref|XP_003634055.1| PREDICTED: uncharacterized protein LOC100854075 [Vitis vinifera]
Length = 1438
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = +2
Query: 254 LPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFEW 391
LP P +VK +R FLGHAGFYRRFIKDFS I+KPLC LL KD FEW
Sbjct: 502 LPPPTNVKGIRQFLGHAGFYRRFIKDFSKIAKPLCELLVKDAKFEW 547
Score = 69.7 bits (169), Expect = 4e-10
Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Frame = +1
Query: 130 IGEELLLNWEKYHFMVTTVIVLGHILIK-GLR*TNPKLS*LQSTS--TKISEGSKIIFRA 300
I ++L+LNWEK HFMV IVLGH++ K G+ K+ + T + + + A
Sbjct: 459 IEKDLVLNWEKCHFMVNQGIVLGHVISKKGIEVDRAKVELIVKLPPPTNVKGIRQFLGHA 518
Query: 301 CWF--L*KIYQRL*YNI*TFV*SSNKRCWF*MDKNCENAFVKLKSMLTSAPIIQPPDWTL 474
++ K + ++ + + K W D C+ +F LK LTS PI++ P+W L
Sbjct: 519 GFYRRFIKDFSKIAKPLCELLVKDAKFEW---DDKCQRSFELLKQFLTSVPIVRAPNWEL 575
Query: 475 PFEIMCDAS 501
PFE+MCD+S
Sbjct: 576 PFEVMCDSS 584
>ref|XP_003631317.1| PREDICTED: uncharacterized protein LOC100852829 [Vitis vinifera]
Length = 1078
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/46 (71%), Positives = 36/46 (78%)
Frame = +2
Query: 254 LPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFEW 391
LP P +VK +R FLGH GFYRRFIKDFS I+KPLC LL KD FEW
Sbjct: 510 LPPPTNVKGIRQFLGHVGFYRRFIKDFSKIAKPLCELLVKDAKFEW 555
Score = 65.5 bits (158), Expect = 7e-09
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 5/129 (3%)
Frame = +1
Query: 130 IGEELLLNWEKYHFMVTTVIVLGHILIK-GLR*TNPKLS*LQSTS--TKISEGSKIIFRA 300
I ++L+LNWEK HFMV IVLGH++ K G+ K+ + T + + +
Sbjct: 467 IEKDLVLNWEKCHFMVNQGIVLGHVISKKGIEVDRAKVELIVKLPPPTNVKGIRQFLGHV 526
Query: 301 CWF--L*KIYQRL*YNI*TFV*SSNKRCWF*MDKNCENAFVKLKSMLTSAPIIQPPDWTL 474
++ K + ++ + + K W D C+ +F LK LTSA I++ P+W L
Sbjct: 527 GFYRRFIKDFSKIAKPLCELLVKDAKFEW---DDKCQRSFELLKQFLTSALIVRVPNWEL 583
Query: 475 PFEIMCDAS 501
PFE+MCD+S
Sbjct: 584 PFEVMCDSS 592
>ref|XP_003632215.1| PREDICTED: uncharacterized protein LOC100852864 [Vitis vinifera]
Length = 1293
Score = 74.3 bits (181), Expect = 2e-11
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = +2
Query: 254 LPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFEW 391
LP P +VK +R FLGHAGFYRRFIKDFS I+KPLC LL K+ FEW
Sbjct: 674 LPPPTNVKGIRQFLGHAGFYRRFIKDFSKIAKPLCELLVKNAKFEW 719
Score = 70.1 bits (170), Expect = 3e-10
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Frame = +1
Query: 130 IGEELLLNWEKYHFMVTTVIVLGHILIK-GLR*TNPKLS*LQSTS--TKISEGSKIIFRA 300
I ++L+LNWEK HFMV IVLGH++ K G+ K+ + T + + + A
Sbjct: 631 IEKDLVLNWEKCHFMVNQGIVLGHVISKKGIEVDRAKVELIGKLPPPTNVKGIRQFLGHA 690
Query: 301 CWF--L*KIYQRL*YNI*TFV*SSNKRCWF*MDKNCENAFVKLKSMLTSAPIIQPPDWTL 474
++ K + ++ + + + K W D C+ +F LK LTS PI++ P+W L
Sbjct: 691 GFYRRFIKDFSKIAKPLCELLVKNAKFEW---DDKCQRSFELLKQFLTSVPIVRAPNWEL 747
Query: 475 PFEIMCDAS 501
PFE+MCD+S
Sbjct: 748 PFEVMCDSS 756
>emb|CAN62418.1| hypothetical protein VITISV_007452 [Vitis vinifera]
Length = 1923
Score = 74.3 bits (181), Expect = 2e-11
Identities = 33/46 (71%), Positives = 36/46 (78%)
Frame = +2
Query: 254 LPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFEW 391
LP P +VK +R FLGHAGFYRRFIKDF I+KPLC LL KD FEW
Sbjct: 1099 LPPPTNVKGIRQFLGHAGFYRRFIKDFPKIAKPLCELLVKDAKFEW 1144
>gb|AAX95925.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|77550633|gb|ABA93430.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 441
Score = 73.9 bits (180), Expect = 2e-11
Identities = 51/128 (39%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Frame = +1
Query: 136 EELLLNWEKYHFMVTTVIVLGH-ILIKGLR*TNPKLS*LQSTSTKIS-EGSKIIFRACWF 309
++L+LNWEK HFMV IVLGH + +G+ K+ + ++ +G F
Sbjct: 305 KDLVLNWEKCHFMVREGIVLGHRVSERGIEVDRAKIDVIDQLPPPVNIKGIHSFLGHAGF 364
Query: 310 L*KIYQRL*YNI*TFV*SSN----KRCWF*MDKNCENAFVKLKSMLTSAPIIQPPDWTLP 477
Y+R + T K F D C +F LK L SAPIIQPPDWTLP
Sbjct: 365 ----YRRFIKDFSTIARPLTNLLAKDAPFGFDDACLKSFEILKKALVSAPIIQPPDWTLP 420
Query: 478 FEIMCDAS 501
FEIMCDAS
Sbjct: 421 FEIMCDAS 428
>emb|CAN66443.1| hypothetical protein VITISV_011562 [Vitis vinifera]
Length = 777
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/46 (71%), Positives = 36/46 (78%)
Frame = +2
Query: 254 LPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFEW 391
LP+P +VK +R FLGHAGFYRRFIKDFS SKPLC LL KD F W
Sbjct: 190 LPSPTTVKGIRQFLGHAGFYRRFIKDFSKFSKPLCELLAKDAKFIW 235
>emb|CAN64595.1| hypothetical protein VITISV_035063 [Vitis vinifera]
Length = 1042
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = +2
Query: 254 LPAPKSVKEVRSFLGHAGFYRRFIKDFSIISKPLCNLLTKDVGFEWTK 397
LP+P ++K VR FLGHAGFYRRFIKDFS +SKPLC LL KD F+ K
Sbjct: 459 LPSPTTIKGVRQFLGHAGFYRRFIKDFSNLSKPLCELLAKDANFDQLK 506
Score = 61.6 bits (148), Expect = 1e-07
Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Frame = +1
Query: 136 EELLLNWEKYHFMVTTVIVLGHILI-KGLR*TNPKLS*L-QSTSTKISEGSKIIFRACWF 309
E+L+ NWEK HFMV IVLGHI+ KG+ K+ + + S +G + F
Sbjct: 418 EDLVFNWEKCHFMVRQGIVLGHIISEKGIEVDKAKVELIVKLPSPTTIKGVRQFLGHAGF 477
Query: 310 L*KIYQRL*YNI*TFV*SSNKRCWF*MDKNCENAFVKLKSMLTSAPIIQPPDWTLPFEIM 489
Y+R I F S C + K+ F +LK LT+API++ P+W LPFE+
Sbjct: 478 ----YRRF---IKDFSNLSKPLCEL-LAKDAN--FDQLKQFLTTAPIVRAPNWQLPFEVX 527
Query: 490 CDAS 501
CDAS
Sbjct: 528 CDAS 531