BLASTX nr result

ID: Rehmannia22_contig00025264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00025264
         (388 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB65580.1| putative ATP-dependent RNA helicase DHX36 [Morus ...    60   4e-07
ref|XP_004173789.1| PREDICTED: LOW QUALITY PROTEIN: dosage compe...    59   5e-07
emb|CAN66462.1| hypothetical protein VITISV_035844 [Vitis vinifera]    59   5e-07
emb|CBI26949.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helica...    57   3e-06
ref|XP_004135386.1| PREDICTED: probable ATP-dependent RNA helica...    56   4e-06
gb|EOX99942.1| DEA(D/H)-box RNA helicase family protein [Theobro...    55   7e-06
ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinu...    55   1e-05

>gb|EXB65580.1| putative ATP-dependent RNA helicase DHX36 [Morus notabilis]
          Length = 857

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/52 (53%), Positives = 32/52 (61%)
 Frame = +1

Query: 1   GNQIMGQLCSNXXXXXXXXXXXXLQWLLGRNGVGHNYVENMSMLLKKSKKDH 156
           G QIMGQ CSN            LQWL+G +  GH Y+ +MSM LKKSKKDH
Sbjct: 805 GMQIMGQPCSNKKSAEKDAAAEALQWLMGESRTGHEYINHMSMRLKKSKKDH 856


>ref|XP_004173789.1| PREDICTED: LOW QUALITY PROTEIN: dosage compensation regulator-like,
           partial [Cucumis sativus]
          Length = 266

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/52 (51%), Positives = 34/52 (65%)
 Frame = +1

Query: 1   GNQIMGQLCSNXXXXXXXXXXXXLQWLLGRNGVGHNYVENMSMLLKKSKKDH 156
           G QIMGQ C+N            L+WL+G N +GH+YV  MSM+LK+SKKDH
Sbjct: 214 GLQIMGQPCTNKKNAEKDAAAEALEWLMGGNQMGHDYVNQMSMMLKRSKKDH 265


>emb|CAN66462.1| hypothetical protein VITISV_035844 [Vitis vinifera]
          Length = 1180

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/53 (54%), Positives = 34/53 (64%)
 Frame = +1

Query: 1    GNQIMGQLCSNXXXXXXXXXXXXLQWLLGRNGVGHNYVENMSMLLKKSKKDHK 159
            G QIMGQ C+N            LQ L+GR   GH Y+++MSMLLKKSKKDHK
Sbjct: 1128 GMQIMGQPCNNKKFAEKDAAAEALQLLMGRTRSGHEYIDHMSMLLKKSKKDHK 1180


>emb|CBI26949.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/53 (52%), Positives = 33/53 (62%)
 Frame = +1

Query: 1    GNQIMGQLCSNXXXXXXXXXXXXLQWLLGRNGVGHNYVENMSMLLKKSKKDHK 159
            G QIMGQ C+N            LQ L+G    GH Y+++MSMLLKKSKKDHK
Sbjct: 1129 GMQIMGQPCNNKKFAEKDAAAEALQLLMGGTQSGHEYIDHMSMLLKKSKKDHK 1181


>ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
            vinifera]
          Length = 1195

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/53 (52%), Positives = 33/53 (62%)
 Frame = +1

Query: 1    GNQIMGQLCSNXXXXXXXXXXXXLQWLLGRNGVGHNYVENMSMLLKKSKKDHK 159
            G QIMGQ C+N            LQ L+G    GH Y+++MSMLLKKSKKDHK
Sbjct: 1143 GMQIMGQPCNNKKFAEKDAAAEALQLLMGGTQSGHEYIDHMSMLLKKSKKDHK 1195


>ref|XP_004135386.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
            sativus]
          Length = 1181

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/51 (50%), Positives = 33/51 (64%)
 Frame = +1

Query: 1    GNQIMGQLCSNXXXXXXXXXXXXLQWLLGRNGVGHNYVENMSMLLKKSKKD 153
            G QIMGQ C+N            L+WL+G N +GH+YV  MSM+LK+SKKD
Sbjct: 1120 GLQIMGQPCTNKKNAEKDAAAEALEWLMGGNQMGHDYVNQMSMMLKRSKKD 1170


>gb|EOX99942.1| DEA(D/H)-box RNA helicase family protein [Theobroma cacao]
          Length = 1232

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/52 (50%), Positives = 31/52 (59%)
 Frame = +1

Query: 1    GNQIMGQLCSNXXXXXXXXXXXXLQWLLGRNGVGHNYVENMSMLLKKSKKDH 156
            G QIMGQ C+N            LQWL+G    G  Y+ +MSMLLKKSK+DH
Sbjct: 1181 GMQIMGQPCNNKKSAEKDAAAEALQWLMGGTQTGREYINHMSMLLKKSKRDH 1232


>ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223534388|gb|EEF36096.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1172

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/52 (50%), Positives = 31/52 (59%)
 Frame = +1

Query: 1    GNQIMGQLCSNXXXXXXXXXXXXLQWLLGRNGVGHNYVENMSMLLKKSKKDH 156
            G QIMGQ C+N            L+WL+G    G  Y+ +MSMLLKKSKKDH
Sbjct: 1120 GMQIMGQPCNNKKSAEKDAAAEALRWLMGETRTGPEYINHMSMLLKKSKKDH 1171


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