BLASTX nr result
ID: Rehmannia22_contig00025261
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00025261
(480 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006364474.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 173 2e-41
ref|XP_004245969.1| PREDICTED: E3 ubiquitin-protein ligase RNF11... 172 3e-41
gb|EPS61306.1| hypothetical protein M569_13496 [Genlisea aurea] 164 9e-39
ref|XP_002323210.1| zinc finger family protein [Populus trichoca... 116 3e-24
gb|EXC30728.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis] 115 6e-24
ref|XP_002308856.2| zinc finger family protein [Populus trichoca... 114 1e-23
gb|ESW17493.1| hypothetical protein PHAVU_007G243900g [Phaseolus... 112 4e-23
ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 112 7e-23
gb|EMJ16889.1| hypothetical protein PRUPE_ppa008742mg [Prunus pe... 108 7e-22
ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 108 1e-21
ref|XP_006481992.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 107 2e-21
ref|XP_006430455.1| hypothetical protein CICLE_v10012279mg [Citr... 107 2e-21
gb|AFK44009.1| unknown [Lotus japonicus] 107 2e-21
ref|XP_003556948.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 106 3e-21
gb|ACU24187.1| unknown [Glycine max] 106 3e-21
ref|XP_004291377.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 105 5e-21
gb|EOY08709.1| RING-H2 finger C1A, putative [Theobroma cacao] 105 6e-21
ref|XP_004144313.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 94 1e-17
ref|XP_002879893.1| ring-H2 finger C1A [Arabidopsis lyrata subsp... 94 2e-17
ref|XP_006294585.1| hypothetical protein CARUB_v10023620mg [Caps... 92 7e-17
>ref|XP_006364474.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1
[Solanum tuberosum] gi|565397806|ref|XP_006364475.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform X2 [Solanum tuberosum]
Length = 300
Score = 173 bits (439), Expect = 2e-41
Identities = 84/138 (60%), Positives = 109/138 (78%), Gaps = 6/138 (4%)
Frame = +3
Query: 84 MSSERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDV-STNTEEHNQRPTFMDAVSN 260
MSS+ +HWCYSC + V+L+R+N VCPNC GGFVQ++ D+ S++ + +QRP FM++VSN
Sbjct: 1 MSSDSCSHWCYSCRQPVNLRRQNDVCPNCGGGFVQELEDITSSSVDNQSQRPRFMESVSN 60
Query: 261 FLTQHLSVRSNISDVRRMSEHG---GN--NSFLVFSGDTPVRMPGNGGLLEFLNETLGFR 425
FL + +S SN S+ R S+ G GN N L+FSGDTPV+MPG+GG+LEFLNE LGFR
Sbjct: 61 FLRRQISTTSNTSE-RGRSDGGAERGNLWNPLLIFSGDTPVQMPGDGGVLEFLNEALGFR 119
Query: 426 RENGGDYFIGPGVEEFFE 479
+ENGGDYF+GPGVEEFFE
Sbjct: 120 QENGGDYFVGPGVEEFFE 137
>ref|XP_004245969.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Solanum
lycopersicum]
Length = 301
Score = 172 bits (437), Expect = 3e-41
Identities = 84/138 (60%), Positives = 107/138 (77%), Gaps = 6/138 (4%)
Frame = +3
Query: 84 MSSERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDV-STNTEEHNQRPTFMDAVSN 260
MSS+ +HWCYSC + V+L+R+N VCPNC GGFVQ++ D+ S++ + QRP FM++VSN
Sbjct: 1 MSSDSCSHWCYSCRQPVNLRRQNDVCPNCGGGFVQELEDITSSSVDNQTQRPRFMESVSN 60
Query: 261 FLTQHLSVRSNISDVRRMSEHG---GN--NSFLVFSGDTPVRMPGNGGLLEFLNETLGFR 425
FL + +S SN S+ R S+ G GN N L+FSGDTPV MPG+GG+LEFLNE LGFR
Sbjct: 61 FLRRQISATSNTSE-RGRSDGGAERGNLWNPLLIFSGDTPVHMPGDGGVLEFLNEALGFR 119
Query: 426 RENGGDYFIGPGVEEFFE 479
+ENGGDYF+GPGVEEFFE
Sbjct: 120 QENGGDYFVGPGVEEFFE 137
>gb|EPS61306.1| hypothetical protein M569_13496 [Genlisea aurea]
Length = 290
Score = 164 bits (416), Expect = 9e-39
Identities = 84/134 (62%), Positives = 101/134 (75%), Gaps = 8/134 (5%)
Frame = +3
Query: 102 THWCYSCSETVSLQRR-NTVCPNCEGGFVQDINDVSTNTEEHNQRPTFMDAVSNFLTQHL 278
THWCYSC E V+L+R+ + VC NC GGFVQ+++ + ++ NQRP FM AVSNFL Q +
Sbjct: 8 THWCYSCREPVTLRRQYHPVCSNCSGGFVQELD----SPQDQNQRPRFMQAVSNFLRQQV 63
Query: 279 SVRSNISDVRRMSE-----HGGNN--SFLVFSGDTPVRMPGNGGLLEFLNETLGFRRENG 437
+VRS ISDV R+ E +GG++ SFLVFSGD PV MPG GG LEF NE LGFRRENG
Sbjct: 64 AVRSGISDVSRIPEPDHHLNGGDSWDSFLVFSGDMPVAMPGAGGFLEFFNEGLGFRRENG 123
Query: 438 GDYFIGPGVEEFFE 479
DYF+GPGVEEFFE
Sbjct: 124 DDYFVGPGVEEFFE 137
>ref|XP_002323210.1| zinc finger family protein [Populus trichocarpa]
gi|222867840|gb|EEF04971.1| zinc finger family protein
[Populus trichocarpa]
Length = 308
Score = 116 bits (291), Expect = 3e-24
Identities = 63/149 (42%), Positives = 86/149 (57%), Gaps = 17/149 (11%)
Frame = +3
Query: 84 MSSERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDV----------STNTEEHNQR 233
MSS R THWCYSC V L+ R++ CP C GGFVQ+++D+ + ++ +QR
Sbjct: 1 MSSSRNTHWCYSCRRPVRLRGRDSACPYCSGGFVQELDDMHRISPLDFFGMDSDDDRDQR 60
Query: 234 PTFMDAVSNFLTQHLSVRSNISDVRRMSEH--GGNNSF---LVFSGDTPVRMPGNGGLLE 398
M+A S+F+ Q ++ RS+ D+R S+ G N F L+F G P R+ GNGG
Sbjct: 61 FGLMEAFSDFMRQRMADRSHNHDIRSRSDSVPGHNPGFGPLLIFGGQVPFRLSGNGGFEA 120
Query: 399 FLNETLG--FRRENGGDYFIGPGVEEFFE 479
+ G F R N GDYFIGPG+EE FE
Sbjct: 121 LFSGAPGVAFARGNAGDYFIGPGLEELFE 149
>gb|EXC30728.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
Length = 322
Score = 115 bits (288), Expect = 6e-24
Identities = 61/146 (41%), Positives = 82/146 (56%), Gaps = 16/146 (10%)
Frame = +3
Query: 90 SERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDV----------STNTEEHNQRPT 239
S R THWCYSC V L+ R+ VCP+C GFVQ++ND+ + E+ ++
Sbjct: 2 SSRNTHWCYSCRRPVRLRGRDAVCPSCNLGFVQELNDMVQVSPLDYIHMGSDEDRGRQFR 61
Query: 240 FMDAVSNFLTQHLSVRSNISDVRRMS----EHGGNNSFLVFSGDTPVRMPGNGGLLEFLN 407
+D++S + Q + RSN D+R S EH G L+F G P+R+ GNGG N
Sbjct: 62 LLDSISALMRQRMVDRSNGLDIRGRSDALPEHPGIGPLLIFGGQIPLRLSGNGGFEALFN 121
Query: 408 ET--LGFRRENGGDYFIGPGVEEFFE 479
T +G R N GDYFIGPG+EE FE
Sbjct: 122 GTPGIGLTRNNVGDYFIGPGLEELFE 147
>ref|XP_002308856.2| zinc finger family protein [Populus trichocarpa]
gi|550335345|gb|EEE92379.2| zinc finger family protein
[Populus trichocarpa]
Length = 308
Score = 114 bits (286), Expect = 1e-23
Identities = 62/149 (41%), Positives = 83/149 (55%), Gaps = 17/149 (11%)
Frame = +3
Query: 84 MSSERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDV----------STNTEEHNQR 233
MSS R THWCYSC V L+ R+ CP C GGFVQ+++D+ ++H+
Sbjct: 1 MSSSRNTHWCYSCRRPVRLRGRDAACPYCSGGFVQELDDMHRINPLDFFGMDGDDDHDNM 60
Query: 234 PTFMDAVSNFLTQHLSVRSNISDVRRMS----EHG-GNNSFLVFSGDTPVRMPGNGGLLE 398
M+A S F+ Q ++ RS+ D+R S EH G L+F G P R+ GNGGL
Sbjct: 61 FGLMEAFSAFMRQRMADRSHNHDIRSRSDSIPEHNPGFGPLLIFGGQIPFRLSGNGGLEA 120
Query: 399 FLNETLG--FRRENGGDYFIGPGVEEFFE 479
+ + G F R N GDYF+GPG+EE FE
Sbjct: 121 LFSGSPGVAFARGNAGDYFVGPGLEELFE 149
>gb|ESW17493.1| hypothetical protein PHAVU_007G243900g [Phaseolus vulgaris]
gi|561018690|gb|ESW17494.1| hypothetical protein
PHAVU_007G243900g [Phaseolus vulgaris]
gi|561018691|gb|ESW17495.1| hypothetical protein
PHAVU_007G243900g [Phaseolus vulgaris]
gi|561018692|gb|ESW17496.1| hypothetical protein
PHAVU_007G243900g [Phaseolus vulgaris]
Length = 308
Score = 112 bits (281), Expect = 4e-23
Identities = 58/149 (38%), Positives = 79/149 (53%), Gaps = 17/149 (11%)
Frame = +3
Query: 84 MSSERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDV----------STNTEEHNQR 233
MS+ R THWCYSC V L RR+ VCP+C GFV ++ND+ N EE +QR
Sbjct: 1 MSNSRNTHWCYSCRRPVRLGRRDAVCPSCNEGFVHELNDMVHVNPFDLFGMDNNEERDQR 60
Query: 234 PTFMDAVSNFLTQHLSVRSNISDVRRMSEHGGNNS-----FLVFSGDTPVRMPGNGGLLE 398
M+ S F+ ++ R D+R ++ +S L+F G P R+ G+GG
Sbjct: 61 VGLMETFSAFMRHQMADRGRSRDIRAQTDSNPEHSAGFAPLLIFGGQIPFRLSGHGGFEA 120
Query: 399 FLNET--LGFRRENGGDYFIGPGVEEFFE 479
N +G R N GDYF+GPG+EE FE
Sbjct: 121 LFNGAPGIGMTRGNTGDYFVGPGLEELFE 149
>ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1
[Glycine max] gi|571440430|ref|XP_006575155.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform X2 [Glycine max]
Length = 309
Score = 112 bits (279), Expect = 7e-23
Identities = 59/149 (39%), Positives = 79/149 (53%), Gaps = 17/149 (11%)
Frame = +3
Query: 84 MSSERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDV----------STNTEEHNQR 233
MS+ R THWCYSC V L RR+ VCP+C GFV ++ND+ N EE +QR
Sbjct: 1 MSNSRNTHWCYSCRRPVWLGRRDAVCPSCNEGFVHELNDMVHVNPFDLFEMDNNEERDQR 60
Query: 234 PTFMDAVSNFLTQHLSVRSNISDVRRMSEHGGNNS-----FLVFSGDTPVRMPGNGGLLE 398
M+ S F+ ++ R D+R ++ +S L+F G P R+ G+GG
Sbjct: 61 LGLMETFSAFMRHQMADRGRSHDIRAQTDSNPEHSAGFAPLLIFGGQIPFRLSGHGGFEA 120
Query: 399 FLNET--LGFRRENGGDYFIGPGVEEFFE 479
N +G R N GDYFIGPG+EE FE
Sbjct: 121 LFNGAPGIGLTRGNTGDYFIGPGLEELFE 149
>gb|EMJ16889.1| hypothetical protein PRUPE_ppa008742mg [Prunus persica]
Length = 321
Score = 108 bits (270), Expect = 7e-22
Identities = 60/149 (40%), Positives = 81/149 (54%), Gaps = 17/149 (11%)
Frame = +3
Query: 84 MSSERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDV----------STNTEEHNQR 233
MSS R THWCY+C V LQ R+ VCP+C+GGF+Q++ND+ N ++H++R
Sbjct: 1 MSSGRNTHWCYNCRRPVRLQGRDAVCPSCDGGFIQELNDMVHVSPLDFFGLDNDDDHDRR 60
Query: 234 PTFMDAVSNFLTQHLSVRSNISDVRRMSEHGGNNS-----FLVFSGDTPVRMPGNGGLLE 398
FM+A F S SD+R S+ + L+F G P R+ GNG
Sbjct: 61 FGFMEA---FSAWQQSTDRRRSDIRGRSDIAPERNPAFTPLLIFGGQIPFRLSGNGAFEA 117
Query: 399 FLNETLGF--RRENGGDYFIGPGVEEFFE 479
F N + G R N GDYF+GPG+EE FE
Sbjct: 118 FFNGSPGISVTRGNVGDYFVGPGLEELFE 146
>ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449529445|ref|XP_004171710.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 305
Score = 108 bits (269), Expect = 1e-21
Identities = 57/144 (39%), Positives = 83/144 (57%), Gaps = 14/144 (9%)
Frame = +3
Query: 90 SERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDV----------STNTEEHNQRPT 239
S THWCY C + V L+ R+ C +C GGFVQ+++++ ++ E N+R
Sbjct: 2 STANTHWCYRCEQPVRLRGRDMTCLSCNGGFVQELDEMMERSPLDLFGASGNEYQNRRLG 61
Query: 240 FMDAVSNFLTQHLSVRSNI-SDVRRMSEHG-GNNSFLVFSGDTPVRMPGNGGLLEFLNET 413
++ SNF+ Q L R++I + + +HG G +L+F G PVR+ G+GG F N
Sbjct: 62 LLELFSNFMRQRLVDRNDIRGRLDSIPDHGPGFGPWLIFGGQIPVRLSGHGGFEAFFNGV 121
Query: 414 --LGFRRENGGDYFIGPGVEEFFE 479
+G R NGGDYFIGPG+EE FE
Sbjct: 122 PGIGVSRSNGGDYFIGPGLEELFE 145
>ref|XP_006481992.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1
[Citrus sinensis] gi|568856865|ref|XP_006481993.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform X2 [Citrus sinensis]
gi|568856867|ref|XP_006481994.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform X3 [Citrus
sinensis]
Length = 309
Score = 107 bits (267), Expect = 2e-21
Identities = 63/149 (42%), Positives = 80/149 (53%), Gaps = 17/149 (11%)
Frame = +3
Query: 84 MSSERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDVST----------NTEEHNQR 233
MSS R THWCY C V LQ + VC C GGFVQ+++D+ + N EE +QR
Sbjct: 1 MSSGRNTHWCYRCRRPVRLQGEDAVCLYCSGGFVQELDDMVSVSPLDFFGLDNDEERDQR 60
Query: 234 PTFMDAVSNFLTQHLSVRSNISDVR----RMSEHG-GNNSFLVFSGDTPVRMPGNGGLLE 398
M+A S F+ ++ R + D+R EHG G L+F G P+R+ GN G
Sbjct: 61 LGLMEAFSAFMRHRMADRHS-HDIRGRYDSTPEHGQGFGPLLIFGGQIPLRLSGNSGFEA 119
Query: 399 FLNET--LGFRRENGGDYFIGPGVEEFFE 479
LGF R N GDYFIGPG+EE FE
Sbjct: 120 IFGGAPGLGFARGNTGDYFIGPGLEELFE 148
>ref|XP_006430455.1| hypothetical protein CICLE_v10012279mg [Citrus clementina]
gi|567875733|ref|XP_006430456.1| hypothetical protein
CICLE_v10012279mg [Citrus clementina]
gi|567875735|ref|XP_006430457.1| hypothetical protein
CICLE_v10012279mg [Citrus clementina]
gi|557532512|gb|ESR43695.1| hypothetical protein
CICLE_v10012279mg [Citrus clementina]
gi|557532513|gb|ESR43696.1| hypothetical protein
CICLE_v10012279mg [Citrus clementina]
gi|557532514|gb|ESR43697.1| hypothetical protein
CICLE_v10012279mg [Citrus clementina]
Length = 309
Score = 107 bits (267), Expect = 2e-21
Identities = 63/149 (42%), Positives = 80/149 (53%), Gaps = 17/149 (11%)
Frame = +3
Query: 84 MSSERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDVST----------NTEEHNQR 233
MSS R THWCY C V LQ + VC C GGFVQ+++D+ + N EE +QR
Sbjct: 1 MSSGRNTHWCYRCRRPVRLQGEDAVCLYCSGGFVQELDDMVSVSPLDFFGLDNDEERDQR 60
Query: 234 PTFMDAVSNFLTQHLSVRSNISDVR----RMSEHG-GNNSFLVFSGDTPVRMPGNGGLLE 398
M+A S F+ ++ R + D+R EHG G L+F G P+R+ GN G
Sbjct: 61 LGLMEAFSAFMRHRMADRHS-HDIRGRYDSTPEHGQGFGPLLIFGGQIPLRLSGNSGFEA 119
Query: 399 FLNET--LGFRRENGGDYFIGPGVEEFFE 479
LGF R N GDYFIGPG+EE FE
Sbjct: 120 IFGGAPGLGFARGNTGDYFIGPGLEELFE 148
>gb|AFK44009.1| unknown [Lotus japonicus]
Length = 293
Score = 107 bits (266), Expect = 2e-21
Identities = 57/149 (38%), Positives = 79/149 (53%), Gaps = 17/149 (11%)
Frame = +3
Query: 84 MSSERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDV----------STNTEEHNQR 233
MS+ R THWC+SC V L R+++C +C GFVQ+++D+ N EEH QR
Sbjct: 1 MSNSRNTHWCHSCRRPVRLGWRDSICRSCNEGFVQELDDMVPVNPLDLVGLDNNEEHGQR 60
Query: 234 PTFMDAVSNFLTQHLSVRSNISDVRRM-----SEHGGNNSFLVFSGDTPVRMPGNGGLLE 398
M+ S F+ + RS+ D+R + G L+F G P R+ G+GG+
Sbjct: 61 FGLMETFSGFMRHQMGNRSHRHDIRAQPDSIPEQGAGFAPLLIFGGQIPFRLSGHGGIEA 120
Query: 399 FLNET--LGFRRENGGDYFIGPGVEEFFE 479
N +G R N GDYFIGPG+EE FE
Sbjct: 121 LFNGAPGIGMTRGNTGDYFIGPGLEEMFE 149
>ref|XP_003556948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Glycine max] gi|356577674|ref|XP_003556949.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 2 [Glycine max]
Length = 309
Score = 106 bits (265), Expect = 3e-21
Identities = 57/149 (38%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Frame = +3
Query: 84 MSSERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDV----------STNTEEHNQR 233
MS+ R THWCYSC V L RR+ VCP+C GFV ++ND+ N EE +QR
Sbjct: 1 MSNSRNTHWCYSCRRPVRLGRRDVVCPSCNLGFVHELNDIVHVNPFDLFGMDNNEERDQR 60
Query: 234 PTFMDAVSNFLTQHLSVRSNISDVRRMSEHGGNNS-----FLVFSGDTPVRMPGNGGLLE 398
M+ S F+ ++ R D+R ++ +S L+F G P R+ +GG
Sbjct: 61 LGLMETFSAFMRHQMADRGRSHDIRVRTDSNPEHSASFAPLLIFGGHIPFRLSRHGGFEA 120
Query: 399 FLNET--LGFRRENGGDYFIGPGVEEFFE 479
N +G + N GDYFIGPG+EE FE
Sbjct: 121 LFNGAPGIGLTQGNTGDYFIGPGLEELFE 149
>gb|ACU24187.1| unknown [Glycine max]
Length = 309
Score = 106 bits (265), Expect = 3e-21
Identities = 57/149 (38%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Frame = +3
Query: 84 MSSERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDV----------STNTEEHNQR 233
MS+ R THWCYSC V L RR+ VCP+C GFV ++ND+ N EE +QR
Sbjct: 1 MSNSRNTHWCYSCRRPVRLGRRDVVCPSCNLGFVHELNDIVHVNPFDLFGMDNNEERDQR 60
Query: 234 PTFMDAVSNFLTQHLSVRSNISDVRRMSEHGGNNS-----FLVFSGDTPVRMPGNGGLLE 398
M+ S F+ ++ R D+R ++ +S L+F G P R+ +GG
Sbjct: 61 LGLMETFSAFMRHQMADRGRSHDIRVRTDSNPEHSASFAPLLIFGGHIPFRLSRHGGFEA 120
Query: 399 FLNET--LGFRRENGGDYFIGPGVEEFFE 479
N +G + N GDYFIGPG+EE FE
Sbjct: 121 LFNGAPGIGLTQGNTGDYFIGPGLEELFE 149
>ref|XP_004291377.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Fragaria vesca subsp. vesca]
gi|470110209|ref|XP_004291378.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 2 [Fragaria
vesca subsp. vesca] gi|470110211|ref|XP_004291379.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 3 [Fragaria vesca subsp. vesca]
Length = 308
Score = 105 bits (263), Expect = 5e-21
Identities = 62/149 (41%), Positives = 82/149 (55%), Gaps = 17/149 (11%)
Frame = +3
Query: 84 MSSERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDV----------STNTEEHNQR 233
MSS R THWCY C LQ R+ VC NC GGFVQ+++D+ S N E+ ++R
Sbjct: 1 MSSGRNTHWCYRCRRPTRLQGRDAVCQNCSGGFVQELDDMVHISPLDFFGSDNDEDRDRR 60
Query: 234 PTFMDAVSNFLTQHLSVRSNISDVRRMS----EHG-GNNSFLVFSGDTPVRMPGNGGLLE 398
FM+A S + Q L+ R + +R S EH G + L+F G P R+ GNG
Sbjct: 61 FGFMEAFSAW--QQLTDRRSSDIIRGRSDFVPEHAPGFSPLLIFGGQIPFRLSGNGAFEA 118
Query: 399 FLNET--LGFRRENGGDYFIGPGVEEFFE 479
N + +G R N GDYF+GPG+EE FE
Sbjct: 119 LFNGSPGIGVTRGNVGDYFVGPGLEELFE 147
>gb|EOY08709.1| RING-H2 finger C1A, putative [Theobroma cacao]
Length = 312
Score = 105 bits (262), Expect = 6e-21
Identities = 60/149 (40%), Positives = 79/149 (53%), Gaps = 17/149 (11%)
Frame = +3
Query: 84 MSSERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDV----------STNTEEHNQR 233
MS+ R THWCY C V LQ R+ VC C GGFVQ+++D+ E+ QR
Sbjct: 1 MSTGRNTHWCYRCRRPVLLQGRDAVCCYCRGGFVQELDDMVHISPLDFFGLDGDEDRIQR 60
Query: 234 PTFMDAVSNFLTQHLSVRSNISDVRRMSEHGGNNS-----FLVFSGDTPVRMPGNGGLLE 398
MDA S + Q L+ R+ ++R ++ N+ L+F G P R+ GNGG
Sbjct: 61 FGLMDAFSALMRQRLADRNFNHNIRGRTDSIPENTSPFGPLLIFGGQIPFRLSGNGGFEA 120
Query: 399 FLNET--LGFRRENGGDYFIGPGVEEFFE 479
N +GF R N GDYFIGPG+EE FE
Sbjct: 121 LFNGAPGIGFTRGNAGDYFIGPGLEELFE 149
>ref|XP_004144313.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Cucumis sativus] gi|449453135|ref|XP_004144314.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 2 [Cucumis sativus]
gi|449488265|ref|XP_004157985.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 1 [Cucumis
sativus] gi|449488269|ref|XP_004157986.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 2 [Cucumis
sativus]
Length = 299
Score = 94.4 bits (233), Expect = 1e-17
Identities = 54/143 (37%), Positives = 76/143 (53%), Gaps = 11/143 (7%)
Frame = +3
Query: 84 MSSERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDVSTNT-------EEHNQRPTF 242
MS+ R THWCY C +V L+ R+ VCPNC GGF+Q+++D+ + R
Sbjct: 1 MSAGRNTHWCYRCRRSVRLRGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
Query: 243 MDAVSNFLTQHLSVRSNI-SDVRRMSEHG-GNNSFLVFSGDTPVRMPGNGGLLEFLNET- 413
+ A S F+ Q L+ R+++ + EH G L+F G P+R N L N
Sbjct: 61 LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLR---NSRLEALFNGAP 117
Query: 414 -LGFRRENGGDYFIGPGVEEFFE 479
+G R + GDYFIGPG+EE FE
Sbjct: 118 GIGITRGDSGDYFIGPGLEELFE 140
>ref|XP_002879893.1| ring-H2 finger C1A [Arabidopsis lyrata subsp. lyrata]
gi|297325732|gb|EFH56152.1| ring-H2 finger C1A
[Arabidopsis lyrata subsp. lyrata]
Length = 329
Score = 93.6 bits (231), Expect = 2e-17
Identities = 55/153 (35%), Positives = 77/153 (50%), Gaps = 21/153 (13%)
Frame = +3
Query: 84 MSSERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDVSTNT----EEHNQR------ 233
MSS R THWC+ C V L ++ VC C GGFV++++ + H+ R
Sbjct: 1 MSSSRNTHWCHRCQRAVQLHGQDPVCSYCGGGFVEELDMAEASPFDMFRAHSHRGVVERD 60
Query: 234 PTF--MDAVSNFLTQHLSVRSNISDVRRMSEHGGNNSF------LVFSGDTPVRMPGNGG 389
PTF MDA S F+ L+ RS+ ++R + G +F L+F G P R+ G+
Sbjct: 61 PTFDLMDAFSAFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLSGDNA 120
Query: 390 LLEFLN---ETLGFRRENGGDYFIGPGVEEFFE 479
+ N +G R N GDYF GPG+EE FE
Sbjct: 121 VEALFNGGSPGIGITRGNTGDYFFGPGLEELFE 153
>ref|XP_006294585.1| hypothetical protein CARUB_v10023620mg [Capsella rubella]
gi|482563293|gb|EOA27483.1| hypothetical protein
CARUB_v10023620mg [Capsella rubella]
Length = 327
Score = 92.0 bits (227), Expect = 7e-17
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Frame = +3
Query: 84 MSSERETHWCYSCSETVSLQRRNTVCPNCEGGFVQDINDVST--------NTEEHNQRPT 239
MSS R THWC+ C V L + VC C GGFV++++ T + + + PT
Sbjct: 1 MSSSRNTHWCHRCQRAVRLHGQEPVCSYCGGGFVEELDMAQTSPFDMFRAHRDVVERDPT 60
Query: 240 F--MDAVSNFLTQHLSVRSNISDVRRMSEHGGNNSF------LVFSGDTPVRMPGNGGLL 395
F MDA S F+ L+ R++ ++R + G +F L+F G P R+ G+ +
Sbjct: 61 FDLMDAFSAFMRNRLAERNHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLSGDNAVE 120
Query: 396 EFLN---ETLGFRRENGGDYFIGPGVEEFFE 479
N +G R N GDYF GPG+EE FE
Sbjct: 121 ALFNGGSPGIGITRGNTGDYFFGPGLEELFE 151