BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00024909
         (525 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron sp...    75   1e-11
ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron sp...    73   4e-11
gb|EMJ04994.1| hypothetical protein PRUPE_ppa001111mg [Prunus pe...    70   4e-10
ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron sp...    70   4e-10
gb|EXB38853.1| Chloroplastic group IIA intron splicing facilitat...    69   8e-10
ref|XP_002309217.2| hypothetical protein POPTR_0006s15340g [Popu...    66   5e-09
ref|XP_002514120.1| conserved hypothetical protein [Ricinus comm...    65   7e-09
ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp...    65   9e-09
emb|CBI27903.3| unnamed protein product [Vitis vinifera]               65   9e-09
ref|XP_004288953.1| PREDICTED: chloroplastic group IIA intron sp...    64   2e-08
ref|XP_003550629.1| PREDICTED: chloroplastic group IIA intron sp...    63   5e-08
gb|EOY30435.1| CRS1 / YhbY domain-containing protein, putative i...    60   3e-07
gb|EOY30434.1| CRS1 / YhbY domain-containing protein, putative i...    60   3e-07
gb|EOY30431.1| CRS1 / YhbY domain-containing protein, putative i...    60   3e-07
ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron sp...    60   3e-07
gb|ESW26644.1| hypothetical protein PHAVU_003G136300g [Phaseolus...    58   1e-06

>ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Solanum lycopersicum]
          Length = 812

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 37/108 (34%), Positives = 54/108 (50%)
 Frame = -2

Query: 332 CQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPSLRQNFPWQEQENGDTNQQ 153
           C     + +  +   N  KK+RKPRPSF++QVQ+KWS+K  SLR+ FPWQE  +    + 
Sbjct: 44  CSSPQTIHSNREKQINEIKKQRKPRPSFVKQVQDKWSVKPTSLREKFPWQEGNSVSVEEV 103

Query: 152 FQAQTXXXXXXXXXXXXXXXXXXXXXXXXSHTKIKSTLAPWVHGNEPR 9
            +AQ                           +++K  LAPWVHG +P+
Sbjct: 104 VEAQVQISKLENPVVNDSVSSG---------SRVKVNLAPWVHGKQPK 142


>ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565382761|ref|XP_006357700.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 820

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 36/108 (33%), Positives = 53/108 (49%)
 Frame = -2

Query: 332 CQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPSLRQNFPWQEQENGDTNQQ 153
           C     + +  +   N  KK+RKPRPSF++QVQ+KWS+K  SLR+ FPWQE  +    + 
Sbjct: 44  CSSPQTIHSNREKQINEIKKQRKPRPSFVKQVQDKWSVKPTSLREKFPWQEGNSVSVEEV 103

Query: 152 FQAQTXXXXXXXXXXXXXXXXXXXXXXXXSHTKIKSTLAPWVHGNEPR 9
            + Q                           +++K  LAPWVHG +P+
Sbjct: 104 VERQVQFSELENPVVNESVSSG---------SRVKVNLAPWVHGKQPK 142


>gb|EMJ04994.1| hypothetical protein PRUPE_ppa001111mg [Prunus persica]
          Length = 906

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
 Frame = -2

Query: 380 THSLKGFGARKPKISCCQQTVEVDTETQHNT-----NLAKKKRKPRPSFLEQVQNKWSLK 216
           THS K   A + ++SC  +TV+VDT+ Q           +KKRKP+PSF EQ+Q+KWS+K
Sbjct: 35  THSFKSCRALRFRVSC--KTVQVDTQEQPQRIKVAFEATRKKRKPKPSFFEQIQDKWSMK 92

Query: 215 TPSLRQNFPWQEQ 177
             S R  FPWQ+Q
Sbjct: 93  VNSPRDKFPWQKQ 105


>ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Cucumis sativus]
          Length = 846

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
 Frame = -2

Query: 362 FGARKPKISCCQQTVEVDTETQHNTNL---AKKKRKPRPSFLEQVQNKWSLKTPSLRQNF 192
           F  ++ KI C   T++V+T+      +    KKKRKPRPSFLEQ+++KWS K  S    F
Sbjct: 41  FTPQRFKIHCSNNTIQVETQPPRRIRVDFEVKKKRKPRPSFLEQIRHKWSTKPISSTHTF 100

Query: 191 PWQEQENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXSHTK----IKSTLAPWVH 24
           PWQ+QE    ++Q + +                           T+     +S  APW H
Sbjct: 101 PWQQQEQDRHHKQDEGEGEEEEEEEEEQVANQTSVSIPESTTDVTQAVPITRSISAPWAH 160

Query: 23  GNEPR 9
           G++ R
Sbjct: 161 GSQSR 165


>gb|EXB38853.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
           notabilis]
          Length = 859

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 46/137 (33%), Positives = 60/137 (43%), Gaps = 12/137 (8%)
 Frame = -2

Query: 380 THSLKGFGARKPKISCCQQTVEVDTETQ--------HNTNLAKKKRKPRPSFLEQVQNKW 225
           TH  K     K +IS  Q+ V+V +E Q          T   KKKRKP+PSF EQ+Q KW
Sbjct: 31  THFSKTSKPLKFRISSSQRVVQVASEQQPQRVKLALETTKQTKKKRKPKPSFFEQIQEKW 90

Query: 224 SLKTPSLRQNFPWQEQENGD----TNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXSHT 57
           S K  S R+ FPWQE+ + D     N++ + +T                           
Sbjct: 91  SAKIGSTREKFPWQEESSQDEQEGDNEEEERETEIDVKESASDSVSFGG----------- 139

Query: 56  KIKSTLAPWVHGNEPRK 6
           K     APW HG +P K
Sbjct: 140 KNGVVSAPWAHGTKPFK 156


>ref|XP_002309217.2| hypothetical protein POPTR_0006s15340g [Populus trichocarpa]
           gi|550336383|gb|EEE92740.2| hypothetical protein
           POPTR_0006s15340g [Populus trichocarpa]
          Length = 977

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 35/92 (38%), Positives = 43/92 (46%)
 Frame = -2

Query: 281 AKKKRKPRPSFLEQVQNKWSLKTPSLRQNFPWQEQENGDTNQQFQAQTXXXXXXXXXXXX 102
           AK KRKP+PSF EQ+ +KWSLK  S R  FPWQEQE     QQ Q Q             
Sbjct: 44  AKSKRKPKPSFFEQIHHKWSLKLTSTRDKFPWQEQE----QQQQQQQEEEEEEEEEDIKE 99

Query: 101 XXXXXXXXXXXXSHTKIKSTLAPWVHGNEPRK 6
                        +   + T  PW+HG  P++
Sbjct: 100 VDAVPSVSDTVSFNLPNRLTTPPWIHGATPKQ 131


>ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
           gi|223546576|gb|EEF48074.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 930

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 38/102 (37%), Positives = 45/102 (44%), Gaps = 11/102 (10%)
 Frame = -2

Query: 278 KKKRKPRPSFLEQVQNKWSLKTPSLRQNFPWQEQENGDTNQQFQAQTXXXXXXXXXXXXX 99
           K KRKPRPSF EQ+++KWSLK PS R  FPWQE E     Q+ Q Q              
Sbjct: 78  KTKRKPRPSFFEQIRDKWSLKVPSTRDTFPWQEPEQ---QQEHQGQGKNDEEEIERCEIS 134

Query: 98  XXXXXXXXXXXSHTKIKS-----------TLAPWVHGNEPRK 6
                      + + I             T APWVHG  P+K
Sbjct: 135 GVTLSKAEIDANPSSIDDDSVSVSLPNHLTTAPWVHGTRPKK 176


>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Vitis vinifera]
          Length = 884

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = -2

Query: 377 HSLKGFGARKPKISCCQQTVEVDTE-TQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPSLR 201
           H    F   K   SC   +++VDT+  +      K KRKPRPSF EQ+++KWSLK  S R
Sbjct: 21  HYSNTFRTLKFNCSCSYHSIQVDTQQVKVPLKTTKAKRKPRPSFFEQIRDKWSLKINSPR 80

Query: 200 QNFPWQEQENGDTN 159
           + FPWQEQ     N
Sbjct: 81  EKFPWQEQAEETQN 94


>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
          Length = 881

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = -2

Query: 377 HSLKGFGARKPKISCCQQTVEVDTE-TQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPSLR 201
           H    F   K   SC   +++VDT+  +      K KRKPRPSF EQ+++KWSLK  S R
Sbjct: 63  HYSNTFRTLKFNCSCSYHSIQVDTQQVKVPLKTTKAKRKPRPSFFEQIRDKWSLKINSPR 122

Query: 200 QNFPWQEQENGDTN 159
           + FPWQEQ     N
Sbjct: 123 EKFPWQEQAEETQN 136


>ref|XP_004288953.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 933

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 29/68 (42%), Positives = 42/68 (61%)
 Frame = -2

Query: 356 ARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPSLRQNFPWQEQ 177
           A + ++SC    ++VD E        KKKRKP+PSF +Q+Q+KWS+K  S R  FPWQ Q
Sbjct: 28  AHRFRVSCKTVEIKVDIEP------TKKKRKPKPSFYQQIQDKWSMKVDSPRHKFPWQNQ 81

Query: 176 ENGDTNQQ 153
           E  +  ++
Sbjct: 82  EESEDEEE 89


>ref|XP_003550629.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Glycine max]
          Length = 794

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 30/66 (45%), Positives = 40/66 (60%)
 Frame = -2

Query: 350 KPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPSLRQNFPWQEQEN 171
           K ++SC  QT ++DT  +       K    RPSFL Q+Q+KWSLK  S R+ FPWQEQ++
Sbjct: 25  KFRVSCSNQTSQLDTPQRVKVANKTKNSSHRPSFLHQIQDKWSLKLGSQREKFPWQEQKH 84

Query: 170 GDTNQQ 153
               QQ
Sbjct: 85  EVEQQQ 90


>gb|EOY30435.1| CRS1 / YhbY domain-containing protein, putative isoform 5
           [Theobroma cacao] gi|508783180|gb|EOY30436.1| CRS1 /
           YhbY domain-containing protein, putative isoform 5
           [Theobroma cacao]
          Length = 822

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
 Frame = -2

Query: 362 FGARKPKISCCQ-QTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLK-TPSLRQNFP 189
           F A K K SCC  QT++V  E         +KRKP+PSFL+Q+++KWSLK   S R+ FP
Sbjct: 36  FRALKFKPSCCSHQTIKVGVEIT-------RKRKPKPSFLDQIKDKWSLKPIISTREKFP 88

Query: 188 WQEQENGDTNQQFQAQT 138
           WQE+E  +  +  + Q+
Sbjct: 89  WQEKEEFEEEEVERKQS 105


>gb|EOY30434.1| CRS1 / YhbY domain-containing protein, putative isoform 4
           [Theobroma cacao]
          Length = 818

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
 Frame = -2

Query: 362 FGARKPKISCCQ-QTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLK-TPSLRQNFP 189
           F A K K SCC  QT++V  E         +KRKP+PSFL+Q+++KWSLK   S R+ FP
Sbjct: 36  FRALKFKPSCCSHQTIKVGVEIT-------RKRKPKPSFLDQIKDKWSLKPIISTREKFP 88

Query: 188 WQEQENGDTNQQFQAQT 138
           WQE+E  +  +  + Q+
Sbjct: 89  WQEKEEFEEEEVERKQS 105


>gb|EOY30431.1| CRS1 / YhbY domain-containing protein, putative isoform 1
           [Theobroma cacao] gi|508783176|gb|EOY30432.1| CRS1 /
           YhbY domain-containing protein, putative isoform 1
           [Theobroma cacao] gi|508783177|gb|EOY30433.1| CRS1 /
           YhbY domain-containing protein, putative isoform 1
           [Theobroma cacao]
          Length = 873

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
 Frame = -2

Query: 362 FGARKPKISCCQ-QTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLK-TPSLRQNFP 189
           F A K K SCC  QT++V  E         +KRKP+PSFL+Q+++KWSLK   S R+ FP
Sbjct: 36  FRALKFKPSCCSHQTIKVGVEIT-------RKRKPKPSFLDQIKDKWSLKPIISTREKFP 88

Query: 188 WQEQENGDTNQQFQAQT 138
           WQE+E  +  +  + Q+
Sbjct: 89  WQEKEEFEEEEVERKQS 105


>ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like, partial [Cucumis sativus]
          Length = 789

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
 Frame = -2

Query: 278 KKKRKPRPSFLEQVQNKWSLKTPSLRQNFPWQEQENGDTNQQFQAQTXXXXXXXXXXXXX 99
           KKKRKPRPSFLEQ+++KWS K  S    FPWQ+QE    ++Q + +              
Sbjct: 15  KKKRKPRPSFLEQIRHKWSTKPISSTHTFPWQQQEQDRHHKQDEGEGEEEEEEEEEQVAN 74

Query: 98  XXXXXXXXXXXSHTK----IKSTLAPWVHGNEPR 9
                        T+     +S  APW HG++ R
Sbjct: 75  QTSVSIPESTTDVTQAVPITRSISAPWAHGSQSR 108


>gb|ESW26644.1| hypothetical protein PHAVU_003G136300g [Phaseolus vulgaris]
          Length = 855

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 28/72 (38%), Positives = 41/72 (56%)
 Frame = -2

Query: 356 ARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPSLRQNFPWQEQ 177
           A K ++S   Q  +V T+ Q      +KK   RPSF  Q+Q+KWS K+ S R+ FPWQE 
Sbjct: 33  AFKFRVSSSNQIPQVQTQQQVKIVKKQKKNSHRPSFFHQIQDKWSHKSGSQREKFPWQES 92

Query: 176 ENGDTNQQFQAQ 141
           ++ +  +Q   Q
Sbjct: 93  QHEEEQRQHHQQ 104