BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00024880
         (1477 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   665   0.0  
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr...   664   0.0  
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl...   661   0.0  
gb|EMJ14726.1| hypothetical protein PRUPE_ppa020640mg [Prunus pe...   660   0.0  
ref|XP_002304926.2| pseudouridine synthase family protein [Popul...   654   0.0  
ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chl...   652   0.0  
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...   652   0.0  
gb|EOY28643.1| Pseudouridine synthase family protein [Theobroma ...   640   0.0  
ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chlor...   640   0.0  
ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chlor...   635   e-179
ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chlor...   633   e-179
ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [...   633   e-179
gb|ESW19737.1| hypothetical protein PHAVU_006G151200g [Phaseolus...   632   e-178
ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chl...   629   e-178
ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   628   e-177
gb|EPS61068.1| hypothetical protein M569_13732 [Genlisea aurea]       627   e-177
ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chl...   624   e-176
ref|XP_004486127.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   618   e-174
ref|XP_004145102.1| PREDICTED: RNA pseudourine synthase 6, chlor...   608   e-171
ref|XP_004158017.1| PREDICTED: RNA pseudourine synthase 6, chlor...   606   e-171

>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis vinifera]
            gi|302144082|emb|CBI23187.3| unnamed protein product
            [Vitis vinifera]
          Length = 472

 Score =  665 bits (1717), Expect = 0.0
 Identities = 329/453 (72%), Positives = 366/453 (80%)
 Frame = -2

Query: 1368 RNFFIPINLARTLASTHSPFKHIHKHHVVNAVGRNLSCEXXXXXXXXXXXXXXXXXXSYP 1189
            R+F  P+ LARTLAS++  F   HK  V      N +C                    YP
Sbjct: 24   RSFGTPVALARTLASSNV-FSRRHKRVVW--CSNNPTCTRELTASSDSANTSSVNG--YP 78

Query: 1188 PYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCPD 1009
             Y RLLPCPSQ GPPRVEHLVVSEGG VL++ISK+L+LPPLFVADLIHFGAV+YALVCP+
Sbjct: 79   EYHRLLPCPSQNGPPRVEHLVVSEGGCVLDYISKALDLPPLFVADLIHFGAVYYALVCPE 138

Query: 1008 PPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVHVH 829
            PP SATPEQ++ FK+ T P +LR+R SIKGKTIREAQKTFRIT  +EFVE GTYLRVHVH
Sbjct: 139  PPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDVNEFVEAGTYLRVHVH 198

Query: 828  PKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAPLR 649
            PKRFPRCYEIDW+SRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGL  PLR
Sbjct: 199  PKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTTPLR 258

Query: 648  TTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPVNI 469
            TTHQIDNCTEGCVVLARTKEYCSVFHGKIRE            AP+ IG++THYMRPVNI
Sbjct: 259  TTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRALAAAPMPIGIVTHYMRPVNI 318

Query: 468  APRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLLTG 289
            APRLISEDFI GW LCQLEVLEC++VPWP++++EEK  IED GWP K+ A++CKINLLTG
Sbjct: 319  APRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGWPLKNSAFKCKINLLTG 378

Query: 288  RTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEWIA 109
            RTHQIR QLAACGAP+VGDS YMPAAIAE   PGLNPFGK KK+YT ++ +  A+ EWIA
Sbjct: 379  RTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKYKKKYTTENDRETAVAEWIA 438

Query: 108  HHGKEPSVAIGLQACHISWDDGEHSYEAGSPWW 10
             HGKEP VAIGLQAC ISWDDGEH Y+AGSPWW
Sbjct: 439  QHGKEPGVAIGLQACQISWDDGEHFYKAGSPWW 471


>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
            gi|557551677|gb|ESR62306.1| hypothetical protein
            CICLE_v10015055mg [Citrus clementina]
          Length = 487

 Score =  664 bits (1714), Expect = 0.0
 Identities = 322/464 (69%), Positives = 372/464 (80%), Gaps = 10/464 (2%)
 Frame = -2

Query: 1368 RNFFIPINLARTLASTH-SPFKHIHKHHVV---NAVGRNLSCEXXXXXXXXXXXXXXXXX 1201
            R+   P++L RTLASTH S  ++I+K +VV   ++  RN  CE                 
Sbjct: 15   RSLGAPVSLLRTLASTHASCHRNIYKSNVVLSFSSSNRNFVCESWKRHVFTHTDTTATAA 74

Query: 1200 XS------YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFG 1039
             +      YP Y RLLPCPSQ  PPRVEHLVVSEGGPVLE+I + LNLPPLFVADLIHFG
Sbjct: 75   AATPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFG 134

Query: 1038 AVFYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVE 859
            AV+YALVCP PP +ATPEQ++ FK+ TDP +L +RSSIKGKT+REAQKTFRIT  D+ VE
Sbjct: 135  AVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVE 194

Query: 858  TGTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFAT 679
             GTYLRVHVHPKRFPRCY+IDW+SRIIAVTES+VVLDKPAGTSVGGTTDNIEESCATFA+
Sbjct: 195  AGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNIEESCATFAS 254

Query: 678  RALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGV 499
            RALGL  PLRTTHQIDNCTEGCVVLART+EYCS+FH KIRE            AP+ +G+
Sbjct: 255  RALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTAAPLPVGI 314

Query: 498  ITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFA 319
            +THYMRP+NIAPRLISEDFI GW LCQLEV+EC+KVPWP++ + +  +IEDCGWP++D+A
Sbjct: 315  MTHYMRPINIAPRLISEDFIKGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWPSRDYA 374

Query: 318  YECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDA 139
            YECKI LLTGRTHQ+R QLAACGAP+VGDS YMPAAIA+ + PGLNPFGK +KEY  DD 
Sbjct: 375  YECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQKEYASDDD 434

Query: 138  KALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
            K +A+ EWI+ HGKEPSVAIGLQACHISWDDGE  YEA SPWWR
Sbjct: 435  KEMAVIEWISQHGKEPSVAIGLQACHISWDDGECCYEARSPWWR 478


>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Citrus sinensis] gi|568827302|ref|XP_006468003.1|
            PREDICTED: RNA pseudouridine synthase 6,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 487

 Score =  661 bits (1706), Expect = 0.0
 Identities = 320/464 (68%), Positives = 371/464 (79%), Gaps = 10/464 (2%)
 Frame = -2

Query: 1368 RNFFIPINLARTLASTH-SPFKHIHKHHVV---NAVGRNLSCEXXXXXXXXXXXXXXXXX 1201
            R+   P++L RTLASTH S  ++I+K +VV   ++  RN  CE                 
Sbjct: 15   RSLGAPVSLLRTLASTHASCHRNIYKSNVVLSFSSSNRNFVCESWKRHVFTHTDTAAIAA 74

Query: 1200 XS------YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFG 1039
             +      YP Y RLLPCPSQ  PPRVEHLVVSEGGPVLE+I + LNLPPLFVADLIHFG
Sbjct: 75   ATTPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFG 134

Query: 1038 AVFYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVE 859
            AV+YALVCP PP +ATPEQ++ FK+ TDP +L +RSSIKGKT+REAQKTFRIT  D+ VE
Sbjct: 135  AVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVE 194

Query: 858  TGTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFAT 679
             GTYLRVHVHPKRFPRCY+IDW SRIIAVTES+VVLDKPAGTSVGGTTDNIEESCATFA+
Sbjct: 195  AGTYLRVHVHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDNIEESCATFAS 254

Query: 678  RALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGV 499
            RALGL  PLRTTHQIDNCTEGCVVLART+EYCS+FH KIRE            AP+ +G+
Sbjct: 255  RALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTTAPLPVGI 314

Query: 498  ITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFA 319
            +THYMRP+NIAPRL+SEDFI+GW LCQLEV+EC+KVPWP++ + +  +IEDCGWP++D+A
Sbjct: 315  MTHYMRPINIAPRLVSEDFITGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWPSRDYA 374

Query: 318  YECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDA 139
            YECKI LLTGRTHQ+R QLAACGAP+VGDS YMPAAIA+ + PGLNPFGK +KEY  DD 
Sbjct: 375  YECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQKEYASDDD 434

Query: 138  KALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
            K +A+ EWI+ HG EPSVAIGLQACHISWDDGE  YEA SPWWR
Sbjct: 435  KEMAVIEWISQHGMEPSVAIGLQACHISWDDGECCYEARSPWWR 478


>gb|EMJ14726.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
          Length = 477

 Score =  660 bits (1704), Expect = 0.0
 Identities = 317/463 (68%), Positives = 365/463 (78%), Gaps = 9/463 (1%)
 Frame = -2

Query: 1368 RNFFIPINLARTLASTH---SPFKHIHKHHVVNAVGRN------LSCEXXXXXXXXXXXX 1216
            R+F  P+ L RTLA TH   S   + +KH  V    R+       +CE            
Sbjct: 15   RSFSAPVALVRTLALTHVALSEHANNYKHVKVACFSRSSKKRTTFACESLKQGVTQPTSV 74

Query: 1215 XXXXXXSYPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGA 1036
                   YP Y RLLPCPS  GPPRVEHLVVSEGGPVLE+I K+L+LPP FVADLIHFGA
Sbjct: 75   SSVNG--YPEYTRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKTLDLPPQFVADLIHFGA 132

Query: 1035 VFYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVET 856
            V+YALVCP PP +ATPEQ++ FK+ T P +L+ R+SIKGKT+REAQKTFRIT  DEFVE 
Sbjct: 133  VYYALVCPKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFRITHADEFVEA 192

Query: 855  GTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATR 676
            GTYLRVHVHPKRFPRCY+IDW+SRIIAV+E +VVLDKPAGT+VGGTTDNIEESCATFATR
Sbjct: 193  GTYLRVHVHPKRFPRCYDIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNIEESCATFATR 252

Query: 675  ALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVI 496
            ALGL  PL TTHQIDNCTEGCVVLARTKEYCSVFHGKIRE            APV  G+I
Sbjct: 253  ALGLTTPLNTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAPVPTGII 312

Query: 495  THYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAY 316
            THYMRP+N+APRLISEDFI  W LCQLEV+EC+++PWPN+++EEK  +EDCGWP+KD+AY
Sbjct: 313  THYMRPINVAPRLISEDFIERWSLCQLEVMECKEIPWPNAVVEEKYCVEDCGWPSKDYAY 372

Query: 315  ECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAK 136
            ECKINLLTGRTHQ+R QLAACGAP+VGDS YMPAA+AE   PGLNPFG+ KK YT ++ K
Sbjct: 373  ECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAVAEMESPGLNPFGQYKKHYTTENDK 432

Query: 135  ALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
              A+ EWIA HGKEP+VAIGLQAC ISWDDG+H++EA +PWWR
Sbjct: 433  ETAVAEWIARHGKEPNVAIGLQACQISWDDGKHTFEARAPWWR 475


>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
            gi|550340110|gb|EEE85437.2| pseudouridine synthase family
            protein [Populus trichocarpa]
          Length = 470

 Score =  654 bits (1687), Expect = 0.0
 Identities = 315/456 (69%), Positives = 365/456 (80%), Gaps = 2/456 (0%)
 Frame = -2

Query: 1368 RNFFIPINLARTLASTHSPFKHIHKHHVV--NAVGRNLSCEXXXXXXXXXXXXXXXXXXS 1195
            R+F  P+ L RTLA T +    ++K  +V  +   R LSCE                   
Sbjct: 15   RSFSAPVTLLRTLAFTRA--YSLNKKALVWCSLSKRKLSCESLKQDIACTTATSSVNG-- 70

Query: 1194 YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 1015
            YP Y RLLPCPS   PPR+EHLVVSE GPVL++I K+L+LPPLFVADLIHFGAV YALVC
Sbjct: 71   YPEYTRLLPCPSHNSPPRIEHLVVSEEGPVLDYICKALDLPPLFVADLIHFGAVHYALVC 130

Query: 1014 PDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVH 835
            P PPR+ATPEQI+ F++ T P +L++R+SIKGKT+REAQKTFRIT  D+F+E G YLRVH
Sbjct: 131  PQPPRTATPEQIRVFEEVTAPSVLKKRASIKGKTVREAQKTFRITHVDQFLEAGMYLRVH 190

Query: 834  VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAP 655
            VHPKRFPRCY+IDW+SRII VTES+VVLDKPAGTSVGGTTDNIEESCATFATRALGL AP
Sbjct: 191  VHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAGTSVGGTTDNIEESCATFATRALGLTAP 250

Query: 654  LRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPV 475
            LRTTHQIDNCTEGCVVLART+E CSVFHGKIRE            +PV IGV+ HYMRP+
Sbjct: 251  LRTTHQIDNCTEGCVVLARTREDCSVFHGKIREKTVKKLYIALAASPVPIGVVNHYMRPI 310

Query: 474  NIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLL 295
            N+APRL+SE+FI GW LCQLEV+EC++VPWP+++MEEK  ++DCGWP+KD AYECKINLL
Sbjct: 311  NMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDAVMEEKYCVQDCGWPSKDHAYECKINLL 370

Query: 294  TGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEW 115
            TGRTHQIR QLAA GAPLVGDS YMPAA+AE   PG NPFGK KK+YT +D KA+A+EEW
Sbjct: 371  TGRTHQIRAQLAALGAPLVGDSMYMPAAVAEMVSPGCNPFGKYKKQYTSEDDKAIAVEEW 430

Query: 114  IAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
            +  HGKEP+VAIGLQAC ISWDDG+H Y AGSPWWR
Sbjct: 431  VLCHGKEPNVAIGLQACQISWDDGKHIYNAGSPWWR 466


>ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Solanum tuberosum] gi|565362724|ref|XP_006348095.1|
            PREDICTED: RNA pseudouridine synthase 6,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 483

 Score =  652 bits (1681), Expect = 0.0
 Identities = 311/458 (67%), Positives = 362/458 (79%), Gaps = 3/458 (0%)
 Frame = -2

Query: 1371 RRNFFIPINLARTLASTHSPF---KHIHKHHVVNAVGRNLSCEXXXXXXXXXXXXXXXXX 1201
            R  FF P N+  T AST S     K+ +K   +++  R+ SC+                 
Sbjct: 27   RNGFFSPFNMVHTFASTRSRLLKNKNHYKRLALSSCSRSFSCQSTALSDISSTSHTVSSN 86

Query: 1200 XSYPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYAL 1021
              +  YGRL+PCP Q  PPRVEHLVV++ GPVLE+I K+L+LPPL+V DLI FGAV+YAL
Sbjct: 87   G-HLRYGRLMPCPLQNSPPRVEHLVVTKEGPVLEYICKALDLPPLYVEDLIQFGAVYYAL 145

Query: 1020 VCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLR 841
            VCP PP +A+PEQIK +++ TDP +LRQR+SIKGKT+REAQKTF+IT  DE VE GTYLR
Sbjct: 146  VCPKPPPTASPEQIKVYEEVTDPSILRQRTSIKGKTVREAQKTFKITRADEIVEAGTYLR 205

Query: 840  VHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQ 661
            VHVHPKRFPRCY+IDW+SRIIAVT+ YVVLDKPAGTSVGGTTDNIEESCATFATRALG  
Sbjct: 206  VHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFATRALGFS 265

Query: 660  APLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMR 481
            APL TTHQIDNCTEGCVVLAR+KEYCSVFHGKIRE            APV IG++THYMR
Sbjct: 266  APLLTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAAAPVPIGILTHYMR 325

Query: 480  PVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKIN 301
            P+N+APRL+SEDF+ GW LCQLEVLEC+KVPWP+S ++   N+EDCGW  KDFAYEC+IN
Sbjct: 326  PINMAPRLVSEDFVKGWLLCQLEVLECKKVPWPSSEIQRTYNLEDCGWALKDFAYECQIN 385

Query: 300  LLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIE 121
            LLTGRTHQIR QLAAC AP+VGDS YMPAAIAE  CPG NPFGKNKK Y++++ K+LAI+
Sbjct: 386  LLTGRTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCPGSNPFGKNKKLYSNENDKSLAID 445

Query: 120  EWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
            EWIA HGKEPSVA+GLQAC ISWDDG+H Y A  PWWR
Sbjct: 446  EWIAQHGKEPSVAVGLQACQISWDDGQHCYGARLPWWR 483


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 476

 Score =  652 bits (1681), Expect = 0.0
 Identities = 313/462 (67%), Positives = 367/462 (79%), Gaps = 8/462 (1%)
 Frame = -2

Query: 1368 RNFFIPINLARTLASTHSPFKHIHKHHVVNAVGR--------NLSCEXXXXXXXXXXXXX 1213
            R+F  P+ + RTLASTH+     H+HH  NA+ R           CE             
Sbjct: 15   RSFVTPVTVLRTLASTHA--YSFHRHHPKNALARFSLNSHERKFCCESSKPEVAYTTNTS 72

Query: 1212 XXXXXSYPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAV 1033
                 S   Y RLLPCPS   PPR+EHLVV E GPVL++I K+L+LPPLFVADLI FGAV
Sbjct: 73   CVNGNS--DYDRLLPCPSYNRPPRIEHLVVLEEGPVLDYICKALDLPPLFVADLIDFGAV 130

Query: 1032 FYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETG 853
             YALVCP PP +ATPEQI+ F+K+T P +L++RSSIKGKT+REAQKTFRIT  D+++E G
Sbjct: 131  HYALVCPRPPTTATPEQIRLFEKFTAPSVLKKRSSIKGKTVREAQKTFRITHVDQYLEAG 190

Query: 852  TYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRA 673
            TYLRVHVHPKRFPRCY+IDW+SRIIAVT+ YVVLDKPAGTSVGGT DNIEESCATFATRA
Sbjct: 191  TYLRVHVHPKRFPRCYDIDWKSRIIAVTDCYVVLDKPAGTSVGGTADNIEESCATFATRA 250

Query: 672  LGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVIT 493
            LGL  PL+TTHQIDNCTEGCVVLAR+KEYCSVFHGKIRE            +PV +GVI 
Sbjct: 251  LGLTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAASPVPVGVIK 310

Query: 492  HYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYE 313
            +YMRPVNIAPRL+SE+F++GW LCQLEVLECRKVPWP++ +EEK ++EDCGWP+KDFAYE
Sbjct: 311  NYMRPVNIAPRLLSEEFVNGWHLCQLEVLECRKVPWPDAAIEEKYSVEDCGWPSKDFAYE 370

Query: 312  CKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKA 133
            CKINLLTGRTHQIR QLAA GAPLVGDS YMPAA+AE   PGLNPFGK++K+YT++  ++
Sbjct: 371  CKINLLTGRTHQIRAQLAASGAPLVGDSMYMPAAVAEMANPGLNPFGKHRKQYTNESDES 430

Query: 132  LAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
            +A+ EW+A HGKEP VAIGLQAC ISWD+G+H Y+AGSPWWR
Sbjct: 431  MAVAEWVAQHGKEPKVAIGLQACEISWDEGKHIYKAGSPWWR 472


>gb|EOY28643.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 491

 Score =  640 bits (1651), Expect = 0.0
 Identities = 317/474 (66%), Positives = 361/474 (76%), Gaps = 20/474 (4%)
 Frame = -2

Query: 1368 RNFFIPINLARTLASTHSPFKHIHKHHVVNAVG--------RNLSC------------EX 1249
            R+   P++L RTLAST +    ++K++    +         R LSC              
Sbjct: 15   RSLGAPMSLLRTLASTGASLYKLNKNYSKTVLSWSCLGSSRRELSCLSTKMDAAQTASAT 74

Query: 1248 XXXXXXXXXXXXXXXXXSYPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPP 1069
                             SYP Y RLLPCPS  GPPRVEHLVVSEGGPVLE+I K+L+LPP
Sbjct: 75   SVNGVLLYFMIEIHFLFSYPEYHRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKALDLPP 134

Query: 1068 LFVADLIHFGAVFYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTF 889
            +FVADLIHFGAV+YALVCP PP SATPEQI+ FK+ T P +L +R+SI+GKT+REAQKTF
Sbjct: 135  MFVADLIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIRGKTVREAQKTF 194

Query: 888  RITSPDEFVETGTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDN 709
            RIT  D+FVE GTYLRVHVHPKRFPRCYEIDW+SRIIAVT+SYVVLDKPAGTSVGGTTDN
Sbjct: 195  RITHVDQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTDN 254

Query: 708  IEESCATFATRALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXX 529
            IEESCATFA RALG   PL+TTHQIDNCTEGCVVLARTKEYCSVFHGKIRE         
Sbjct: 255  IEESCATFANRALGFSTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLA 314

Query: 528  XXXAPVSIGVITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIE 349
               AP+ IGVITHYMRP+N+APRL+SEDFI GW LCQLEV+EC+KVPWP+ +++E   IE
Sbjct: 315  LTAAPLPIGVITHYMRPINMAPRLVSEDFIKGWYLCQLEVMECKKVPWPDYVIQENYCIE 374

Query: 348  DCGWPTKDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGK 169
            D GWP KD AYECKINLLTGRTHQ+R QLAACGAP++GDS YMP  IAE   PGLNPFGK
Sbjct: 375  DSGWPLKDHAYECKINLLTGRTHQVRAQLAACGAPILGDSMYMPPTIAEIANPGLNPFGK 434

Query: 168  NKKEYTDDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
             KK +T ++ K +AI EWI+  GKEPSVAIGLQAC ISWDDGEH Y+A SPWWR
Sbjct: 435  YKK-HTSENDKEIAITEWISQFGKEPSVAIGLQACQISWDDGEHFYKARSPWWR 487


>ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Fragaria
            vesca subsp. vesca]
          Length = 477

 Score =  640 bits (1651), Expect = 0.0
 Identities = 306/464 (65%), Positives = 358/464 (77%), Gaps = 10/464 (2%)
 Frame = -2

Query: 1368 RNFFIPINLARTLASTH-------SPFKHIHK---HHVVNAVGRNLSCEXXXXXXXXXXX 1219
            R+F  P+ L RTLA TH         ++H+        +    + ++CE           
Sbjct: 15   RSFIAPVGLVRTLALTHVGLSEQLRSYQHVKVAWFSKKLKKKNKRVACESLKEEVTYPTA 74

Query: 1218 XXXXXXXSYPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFG 1039
                      PY RLLPCPSQ GPPRVEHLVVSEGGPVLE+I K L+LP  FVADLIHFG
Sbjct: 75   ASSVYGY---PYTRLLPCPSQNGPPRVEHLVVSEGGPVLEYICKKLDLPAQFVADLIHFG 131

Query: 1038 AVFYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVE 859
            AV+YALVCP PP +ATPEQ++ +K+ T P +L++R SIKGKT+REAQKTFRIT  D++VE
Sbjct: 132  AVYYALVCPKPPPTATPEQMRVYKEVTAPSVLKKRDSIKGKTVREAQKTFRITHADQYVE 191

Query: 858  TGTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFAT 679
             GTYLRVHVHPKRFPRCY+IDW+SR+IAVTE +VVLDKPAGT+VGGTTDNIEESCATF +
Sbjct: 192  DGTYLRVHVHPKRFPRCYDIDWKSRVIAVTEDFVVLDKPAGTTVGGTTDNIEESCATFTS 251

Query: 678  RALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGV 499
            RALGL  PL TTHQIDNCTEGCVVLARTK+YCSVFHGKIRE            APV +G 
Sbjct: 252  RALGLSTPLMTTHQIDNCTEGCVVLARTKDYCSVFHGKIREKKVKKLYLALAAAPVPLGT 311

Query: 498  ITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFA 319
            ITHYMRP+N+APRLISED I  W LCQLEV+EC+KVPWP+S++EE+  +EDCGWP+KD+A
Sbjct: 312  ITHYMRPINVAPRLISEDSIERWSLCQLEVMECKKVPWPSSVIEEEYGVEDCGWPSKDYA 371

Query: 318  YECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDA 139
            YECKINLLTG+THQIR QLAACG PLVGDS YMPAAIAE   P LNPFGK+KK Y  ++ 
Sbjct: 372  YECKINLLTGKTHQIRAQLAACGTPLVGDSMYMPAAIAEMENPELNPFGKHKKHYAGEND 431

Query: 138  KALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
            + +A+ EW+A HGKEP VAIGLQAC ISWDDGEHS+EA +PWWR
Sbjct: 432  EEIAVTEWMARHGKEPIVAIGLQACQISWDDGEHSFEARAPWWR 475


>ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
            sativus]
          Length = 475

 Score =  635 bits (1639), Expect = e-179
 Identities = 298/396 (75%), Positives = 334/396 (84%)
 Frame = -2

Query: 1194 YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 1015
            YP Y RLLPCPS   PPRVEH+VV E GPV+E+I KSLNLPPL+VADLIHFGAV+YALVC
Sbjct: 76   YPQYHRLLPCPSFSKPPRVEHMVVLEAGPVMEYICKSLNLPPLYVADLIHFGAVYYALVC 135

Query: 1014 PDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVH 835
            P PP++ATPEQI+ FKK+T+P  L+ R SIKGKT+REAQKTFRIT  DEFVE GTYLRVH
Sbjct: 136  PQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTYLRVH 195

Query: 834  VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAP 655
            VHPKRFPRCYEIDW+SRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGL +P
Sbjct: 196  VHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTSP 255

Query: 654  LRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPV 475
            L TTHQIDNCTEGCV+ ARTKEYCS+FHGKIRE            APV +G+ITHYMRP+
Sbjct: 256  LWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAPVPMGIITHYMRPI 315

Query: 474  NIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLL 295
            NIAPRL+S+D I GW +CQLEVLECR+V WP++ +E K  +EDCGWP+K  AYEC+INLL
Sbjct: 316  NIAPRLVSKDCIDGWIICQLEVLECREVSWPDADIEAKYRVEDCGWPSKKKAYECRINLL 375

Query: 294  TGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEW 115
            TGRTHQIR QLA CGAPLVGDS YMPA +AE   PGLNPFGK KKEYT+++ K  A+ EW
Sbjct: 376  TGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEYTNEEDKETAVAEW 435

Query: 114  IAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
             A HGKEP+VAIGLQA  ISWD  EHSY AG+PWWR
Sbjct: 436  SALHGKEPAVAIGLQAYEISWDSREHSYNAGTPWWR 471


>ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Solanum
            lycopersicum]
          Length = 448

 Score =  633 bits (1632), Expect = e-179
 Identities = 292/393 (74%), Positives = 337/393 (85%)
 Frame = -2

Query: 1185 YGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCPDP 1006
            YGRL+PCP Q  PPRVEHLVV++ GPV+E+I K+L+LPPL+V DLI FGAV+YALVCP P
Sbjct: 56   YGRLMPCPLQNSPPRVEHLVVTKEGPVVEYICKALDLPPLYVEDLIQFGAVYYALVCPKP 115

Query: 1005 PRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVHVHP 826
            P +A+PEQIK +++ TDP +LR+R+SIKGKT+REAQKTF+IT  DE VE GTYLRVHVHP
Sbjct: 116  PPTASPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFKITRADEIVEAGTYLRVHVHP 175

Query: 825  KRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAPLRT 646
            KRFPRCY+IDW+SRIIAVT+ YVVLDKPAGTSVGGTTDNIEESCATFATRALG  APL T
Sbjct: 176  KRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFATRALGFSAPLLT 235

Query: 645  THQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPVNIA 466
            THQIDNCTEGCVVLAR+KEYCSVFHGKIRE            APV IG++THYMRP+N+A
Sbjct: 236  THQIDNCTEGCVVLARSKEYCSVFHGKIREKKVRKLYLALAAAPVPIGILTHYMRPINMA 295

Query: 465  PRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLLTGR 286
            PRL+S DF+ GW LCQLEVLEC+KVPWP+S ++   N+EDCGW  KD+AYEC+INLLTGR
Sbjct: 296  PRLVSRDFVKGWLLCQLEVLECQKVPWPSSEIQRTYNLEDCGWALKDYAYECQINLLTGR 355

Query: 285  THQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEWIAH 106
            THQIR QLAAC AP+VGDS YMPAAIAE  CPG NPFGKNKK Y++++ K+LAI+EWIA 
Sbjct: 356  THQIRAQLAACSAPVVGDSMYMPAAIAEIVCPGSNPFGKNKKLYSNENDKSLAIDEWIAQ 415

Query: 105  HGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
            HGKEPSVA+GLQAC ISWDDG+H Y A  PWWR
Sbjct: 416  HGKEPSVAVGLQACQISWDDGQHCYGARMPWWR 448


>ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542359|gb|EEF43901.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 395

 Score =  633 bits (1632), Expect = e-179
 Identities = 292/393 (74%), Positives = 338/393 (86%)
 Frame = -2

Query: 1185 YGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCPDP 1006
            Y RLLPCPSQ  PPRVEHLVV E GPVL++I K+L+LPPLFVADLIHFGAV YALVCP P
Sbjct: 3    YDRLLPCPSQNRPPRVEHLVVLEEGPVLDYICKALDLPPLFVADLIHFGAVHYALVCPQP 62

Query: 1005 PRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVHVHP 826
            P +ATPEQI+ F+++T P +L++R+SIKGKT+REAQKTFR++S  +F+E GTYLRV+VHP
Sbjct: 63   PPTATPEQIRLFEEFTAPSVLKKRASIKGKTVREAQKTFRVSSVHQFLEVGTYLRVYVHP 122

Query: 825  KRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAPLRT 646
            +RFPRCYEIDW+SRIIAVTESYVVLDKPAGTSVGGTT+NIEE+CATFATRALGL  PL+T
Sbjct: 123  RRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTNNIEETCATFATRALGLTIPLKT 182

Query: 645  THQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPVNIA 466
            THQIDNCTEGCVVLART EYC VFHGKIRE             PV +GVITHYMRP NI 
Sbjct: 183  THQIDNCTEGCVVLARTNEYCPVFHGKIRENKVKKLYLALAACPVPVGVITHYMRPGNIP 242

Query: 465  PRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLLTGR 286
            PRL+SE+FI GW LCQLEVLECRKVPWP+++ EEK ++EDCGWP+KDFAYECKINLLTGR
Sbjct: 243  PRLVSEEFIEGWYLCQLEVLECRKVPWPDTVTEEKYSVEDCGWPSKDFAYECKINLLTGR 302

Query: 285  THQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEWIAH 106
            THQIR QLAACGAPLVGDS YMPAAIAE   PG+NPFGK+KK+YT ++ +++ + EW+  
Sbjct: 303  THQIRAQLAACGAPLVGDSMYMPAAIAEMANPGVNPFGKHKKQYTGENDESMGVAEWVER 362

Query: 105  HGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
            HGKEPS+AIGLQAC ISW D +H Y+AG PWWR
Sbjct: 363  HGKEPSIAIGLQACEISWGDSKHIYKAGPPWWR 395


>gb|ESW19737.1| hypothetical protein PHAVU_006G151200g [Phaseolus vulgaris]
          Length = 478

 Score =  632 bits (1629), Expect = e-178
 Identities = 295/395 (74%), Positives = 329/395 (83%)
 Frame = -2

Query: 1191 PPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCP 1012
            P Y RLLPCP    PPRVEHLVVSEGGPVLE I K+L LPPL+V DLI FGAV+YALVCP
Sbjct: 83   PKYDRLLPCPLHKTPPRVEHLVVSEGGPVLEHICKALELPPLYVTDLIQFGAVYYALVCP 142

Query: 1011 DPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVHV 832
             PP SAT EQI+ FK+ T+P +LRQR+SIKGKT+REAQKTFR+T  D+FVE GTYLRVHV
Sbjct: 143  QPPPSATEEQIRVFKEVTEPSVLRQRASIKGKTVREAQKTFRVTHADQFVEPGTYLRVHV 202

Query: 831  HPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAPL 652
            HPKRFPRCYEIDWRSRII+V ESYVVLDKPAGTSVGGTTDNIEESCATFATRALGL APL
Sbjct: 203  HPKRFPRCYEIDWRSRIISVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTAPL 262

Query: 651  RTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPVN 472
             TTHQIDNCTEGCVVLARTKEYCSVFHGKIRE            +P+  G+ITHYMRP+N
Sbjct: 263  MTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALASSPLPTGIITHYMRPIN 322

Query: 471  IAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLLT 292
            +APRLISEDFI GW +CQLE+ ECRKVPWP   +++K  +EDCGWP +DFAYECKINLLT
Sbjct: 323  MAPRLISEDFIKGWLMCQLEIQECRKVPWPTPSIQDKYCVEDCGWPYQDFAYECKINLLT 382

Query: 291  GRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEWI 112
            GRTHQIR Q AAC APLVGDS YMPAAI + + PGLNPFGK K++++ +  K  A+  WI
Sbjct: 383  GRTHQIRAQFAACRAPLVGDSMYMPAAIGDMSNPGLNPFGKYKRDFSSESEKETAVVNWI 442

Query: 111  AHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
            A HGKEP VAIGLQAC ISWDD +H YE+GSPWWR
Sbjct: 443  AQHGKEPGVAIGLQACQISWDDDDHFYESGSPWWR 477


>ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Glycine max]
          Length = 478

 Score =  629 bits (1623), Expect = e-178
 Identities = 289/396 (72%), Positives = 334/396 (84%)
 Frame = -2

Query: 1194 YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 1015
            +P Y RLLPCPS   PPR+EHLV+SEGGPVLE I K+L+LPPL+V+DLI FGAV+YALVC
Sbjct: 82   FPKYDRLLPCPSHKNPPRIEHLVISEGGPVLELICKALDLPPLYVSDLIQFGAVYYALVC 141

Query: 1014 PDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVH 835
            P PP +AT EQI+ FK+ T+P +LR+R+SIKGKT+REAQKTFR+T  D+FVE GTYLRVH
Sbjct: 142  PQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPGTYLRVH 201

Query: 834  VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAP 655
            VHPKRFPR YEIDWRSRIIAV ESYVVLDKPAGTSVGGTTDNIEESCATFATRALG+  P
Sbjct: 202  VHPKRFPRSYEIDWRSRIIAVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALGMTTP 261

Query: 654  LRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPV 475
            L TTHQIDNCTEGCVVLARTK+YCS+FHGKIRE            +P+  G+ITHYMRP+
Sbjct: 262  LMTTHQIDNCTEGCVVLARTKDYCSIFHGKIREKKVKKLYLALAASPLPTGIITHYMRPI 321

Query: 474  NIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLL 295
            N+APRLISEDFI GW LCQLEVLECRK+PWP + +++K  +EDCGWP++D+AYECKINLL
Sbjct: 322  NMAPRLISEDFIKGWHLCQLEVLECRKIPWPTTAIQDKYCVEDCGWPSQDYAYECKINLL 381

Query: 294  TGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEW 115
            TG+THQIR Q AA  APL+GDS YMPAAIA+ + PGLNPFGK KK+++ +  K  A+  W
Sbjct: 382  TGKTHQIRAQFAAYKAPLIGDSMYMPAAIADVSNPGLNPFGKYKKDFSSESEKETAVVNW 441

Query: 114  IAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
            +A HGKEPSVAIGLQAC ISWDD EH YEAG PWWR
Sbjct: 442  MAQHGKEPSVAIGLQACQISWDDDEHFYEAGLPWWR 477


>ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
            chloroplastic-like [Cucumis sativus]
          Length = 475

 Score =  628 bits (1619), Expect = e-177
 Identities = 295/396 (74%), Positives = 330/396 (83%)
 Frame = -2

Query: 1194 YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 1015
            YP Y RLLPCPS   PPRVEH+VV E GPV+E+I KSLNLPPL+VADLIHFGAV+YALVC
Sbjct: 76   YPQYHRLLPCPSFSKPPRVEHMVVLEAGPVMEYICKSLNLPPLYVADLIHFGAVYYALVC 135

Query: 1014 PDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVH 835
            P PP++ATPEQI+ FK  T+P  L+ R SIKGKT+REAQKTFRIT  DEFVE GTYLRVH
Sbjct: 136  PQPPKTATPEQIRLFKNXTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTYLRVH 195

Query: 834  VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAP 655
            VHPKRFPRCYEIDW+SRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGL +P
Sbjct: 196  VHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTSP 255

Query: 654  LRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPV 475
            L TTHQIDNCTEGCV+ ARTKEYCS+FHGKIRE            APV +G+ITHYMRP+
Sbjct: 256  LWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAPVPMGIITHYMRPI 315

Query: 474  NIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLL 295
            NIAPRL+S+D I GW +CQLEVLECR+V WP++  E K  +EDCGWP+K  AYEC+INLL
Sbjct: 316  NIAPRLVSKDCIDGWIICQLEVLECREVSWPDADTEAKYRVEDCGWPSKKKAYECRINLL 375

Query: 294  TGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEW 115
            TGRTHQIR QLA CGAPLVGDS YMPA +AE   PGLNPFGK KKEYT+++ K  ++ EW
Sbjct: 376  TGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEYTNEEDKETSVAEW 435

Query: 114  IAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
             A HGKEP+VAIGLQA  ISWD  EH Y AG+PWWR
Sbjct: 436  SALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWR 471


>gb|EPS61068.1| hypothetical protein M569_13732 [Genlisea aurea]
          Length = 461

 Score =  627 bits (1616), Expect = e-177
 Identities = 300/402 (74%), Positives = 333/402 (82%), Gaps = 6/402 (1%)
 Frame = -2

Query: 1194 YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 1015
            YPPYGRLLPCP +   PRVEHLVVSEGGPVLE+IS +L +PPLFVADLIHFGAVFYALVC
Sbjct: 62   YPPYGRLLPCPIENTLPRVEHLVVSEGGPVLEYISNALEIPPLFVADLIHFGAVFYALVC 121

Query: 1014 PDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVH 835
            PDPP +A PE+++ ++KYTD  +L +R SIKGKT REAQKTFRIT  DE VETGTYLRVH
Sbjct: 122  PDPPSTAAPEEMEIYRKYTDRSVLSKRPSIKGKTRREAQKTFRITRTDELVETGTYLRVH 181

Query: 834  VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAP 655
            VHPKRFPRCYEIDW+SRIIAVT +YVVLDKPAGTSVGGTTDNIEE CATFA+RALGL  P
Sbjct: 182  VHPKRFPRCYEIDWKSRIIAVTANYVVLDKPAGTSVGGTTDNIEECCATFASRALGLSEP 241

Query: 654  LRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPV 475
            LRTTHQIDNCTEGCVV A+TKEYCSVFHGKIRE            APV IG+ITHYMRPV
Sbjct: 242  LRTTHQIDNCTEGCVVFAKTKEYCSVFHGKIREKTVKKLYLALTSAPVPIGIITHYMRPV 301

Query: 474  NIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLL 295
            NIAPRLIS DFISGW +C+LEVLECRKV WP+ I + K N++DCGWP ++ AYECKINLL
Sbjct: 302  NIAPRLISSDFISGWHMCRLEVLECRKVRWPSEIAQRKQNVDDCGWPNRESAYECKINLL 361

Query: 294  TGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEW 115
            TG+THQIR QLAA GAPLVGDS YMPAA++E   PGLNPFG NK+EY +D+     +E W
Sbjct: 362  TGKTHQIRAQLAARGAPLVGDSMYMPAAMSEMQFPGLNPFGSNKREYEEDE--VWGMEGW 419

Query: 114  IAHHGKEPSVAIGLQACHISWDDGE------HSYEAGSPWWR 7
            I  HGKEPS AIGLQA H+SWDD E      HSYEAGSPWWR
Sbjct: 420  IKAHGKEPSGAIGLQARHVSWDDDEQQQRRRHSYEAGSPWWR 461


>ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Glycine max]
          Length = 478

 Score =  624 bits (1609), Expect = e-176
 Identities = 292/393 (74%), Positives = 329/393 (83%)
 Frame = -2

Query: 1185 YGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCPDP 1006
            Y RLLPCPS   PPR+EHLVVSEGGPVLE I K+L+LPPL+V+DLI FGAV+YALVCP P
Sbjct: 85   YDRLLPCPSHKTPPRIEHLVVSEGGPVLEHICKALDLPPLYVSDLIQFGAVYYALVCPQP 144

Query: 1005 PRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVHVHP 826
            P +AT EQI+ FK+ T+P +LR+R+SIKGKT+REAQKTFR+T  D+FVE GTYLRVHVHP
Sbjct: 145  PPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPGTYLRVHVHP 204

Query: 825  KRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAPLRT 646
            KR PRCYEIDWRSRII V ESYVVLDKPAGTSVGGTTDNIEESCATFATRALG+  PL T
Sbjct: 205  KRSPRCYEIDWRSRIITVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALGMTTPLMT 264

Query: 645  THQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPVNIA 466
            THQIDNCTEGCVVLARTKEYCSVFHGKIRE             P+  G+ITHYMRP+++A
Sbjct: 265  THQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKFYLALAAFPLPTGIITHYMRPIDMA 324

Query: 465  PRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLLTGR 286
            PRLISEDFI GW LCQLEVLECRKVPWP + +++K  IEDCGWP++D+AYECKINLLTG+
Sbjct: 325  PRLISEDFIKGWHLCQLEVLECRKVPWPATAIQDKYCIEDCGWPSQDYAYECKINLLTGK 384

Query: 285  THQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEWIAH 106
            THQIR Q AA  APL+GDS YMPAAIA  + PGLNPFGK KK+++ +  K  A+  WIA 
Sbjct: 385  THQIRAQFAAYKAPLIGDSMYMPAAIANMSNPGLNPFGKYKKDFSSESEKETAVVNWIAQ 444

Query: 105  HGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
            HGKEPSVAIGLQAC ISWDD EH YEA SPWWR
Sbjct: 445  HGKEPSVAIGLQACQISWDDDEHFYEASSPWWR 477


>ref|XP_004486127.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
            chloroplastic-like [Cicer arietinum]
          Length = 467

 Score =  618 bits (1594), Expect = e-174
 Identities = 292/408 (71%), Positives = 330/408 (80%), Gaps = 12/408 (2%)
 Frame = -2

Query: 1194 YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 1015
            YP Y RLLPCP+   PPR+EH+VVSEGGPVLE+I K+L+LPPLFVADLI FGAV++ALVC
Sbjct: 59   YPKYNRLLPCPTHKIPPRIEHIVVSEGGPVLEYICKALDLPPLFVADLIKFGAVYFALVC 118

Query: 1014 PDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVH 835
            P PP +AT E+I+ FKK T+PL+LR+R+SIKGKTIREAQKTF +T  D+FVE GTYLRVH
Sbjct: 119  PKPPPTATAEEIRVFKKATEPLVLRKRASIKGKTIREAQKTFLVTDVDQFVEPGTYLRVH 178

Query: 834  VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAP 655
            VHPKRFPRCYEIDWRSRIIAV ESYV+LDKPAGTSVGGTT N EESCA FATRAL L  P
Sbjct: 179  VHPKRFPRCYEIDWRSRIIAVEESYVILDKPAGTSVGGTTGNTEESCANFATRALELTTP 238

Query: 654  LRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPV 475
            L TTHQIDNCTEGCVVLAR KEYCSVFHGKIRE            +P+  G+I HYMRP+
Sbjct: 239  LMTTHQIDNCTEGCVVLARNKEYCSVFHGKIREKKVKKIYLALAASPLPTGIIKHYMRPI 298

Query: 474  NIAPRLISED------------FISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPT 331
            N+APRLISE             F  GW +CQLEVLEC K+PWP ++++EK  +EDCGWP+
Sbjct: 299  NMAPRLISEGXTTQIGMHSKDYFNKGWHICQLEVLECIKIPWPTTVVQEKYCVEDCGWPS 358

Query: 330  KDFAYECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYT 151
            +D+AYECKINLLTGRTHQIR Q AAC APL+GDS YMPAAIAE   PGLNPFGK KK++T
Sbjct: 359  QDYAYECKINLLTGRTHQIRAQFAACKAPLIGDSMYMPAAIAEMMNPGLNPFGKYKKDFT 418

Query: 150  DDDAKALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
             +  K  A+  WIA HGKEPSVAIGLQAC ISWDDGEH YEAGSPWWR
Sbjct: 419  SESEKETAVINWIAQHGKEPSVAIGLQACQISWDDGEHIYEAGSPWWR 466


>ref|XP_004145102.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
            sativus]
          Length = 475

 Score =  608 bits (1567), Expect = e-171
 Identities = 288/396 (72%), Positives = 327/396 (82%)
 Frame = -2

Query: 1194 YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 1015
            YP Y RLLPC S   PPRVEHLVV EGGPV+E+ISKSL+LPP++VADLIHFGAV+YALVC
Sbjct: 76   YPQYHRLLPCTSFNVPPRVEHLVVLEGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVC 135

Query: 1014 PDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVH 835
            P PP +A+ E+I+ FKK+T P  L  R SIKGKT+REAQKTFRIT  DEFVE GTYLRV+
Sbjct: 136  PQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVY 195

Query: 834  VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAP 655
            VHPKRFPRCYE+DW+SRIIAVT+SYVVLDKPAGTSVGGTT+NIEE+C TFATRALGL +P
Sbjct: 196  VHPKRFPRCYEVDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSP 255

Query: 654  LRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPV 475
            L TTHQIDNCTEGCV+LARTKEYCS+FH KIRE             P+  G++THYMRP 
Sbjct: 256  LWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVTKLYLALVAVPLPKGIMTHYMRPN 315

Query: 474  NIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLL 295
            N+APRL+S D I GW LCQLEVLECR+V WP++ +E K +IEDCGWP+K  A+ECKINLL
Sbjct: 316  NLAPRLVSRDCIDGWNLCQLEVLECREVSWPDADIEAKYSIEDCGWPSKKKAFECKINLL 375

Query: 294  TGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEW 115
            TGRTHQIR QLA CGAPLVGDS YMPA +AE   PGLNPFGK KKEYT ++ K  A+ EW
Sbjct: 376  TGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMANPGLNPFGKCKKEYTSEEDKENAVAEW 435

Query: 114  IAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
            IA HGKEP+VAIGLQA  ISWD  EHSY AG+PWWR
Sbjct: 436  IALHGKEPAVAIGLQAYEISWDSREHSYNAGTPWWR 471


>ref|XP_004158017.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
            sativus]
          Length = 475

 Score =  606 bits (1562), Expect = e-171
 Identities = 288/396 (72%), Positives = 327/396 (82%)
 Frame = -2

Query: 1194 YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 1015
            YP Y RLLPC S   PPRVEHLVV EGGPV+E+ISKSL+LPP++VADLIHFGAV+YALVC
Sbjct: 76   YPQYHRLLPCTSFNVPPRVEHLVVLEGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVC 135

Query: 1014 PDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVH 835
            P PP +A+ E+I+ FKK+T P  L  R SIKGKT+REAQKTFRIT  DEFVE GTYLRV+
Sbjct: 136  PQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVY 195

Query: 834  VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAP 655
            VHPKRFPRCYE+DW+SRIIAVT+SYVVLDKPAGTSVGGTT+NIEE+C TFATRALGL +P
Sbjct: 196  VHPKRFPRCYEVDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSP 255

Query: 654  LRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPV 475
            L TTHQIDNCTEGCV+LARTKEYCS+FH KIRE             P+  G++THYMRP 
Sbjct: 256  LWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVTKLYLALVAVPLPKGIMTHYMRPN 315

Query: 474  NIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLL 295
            N+APRL+S D I GW LCQLEVLECR+V WP++ +E K +IEDCGWP+K  A+ECKINLL
Sbjct: 316  NLAPRLVSRDCIDGWNLCQLEVLECREVSWPDADIEAKYSIEDCGWPSKKKAFECKINLL 375

Query: 294  TGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEW 115
            TGRTHQIR QLA  GAPLVGDS YMPAA+AE   PGLNPFGK KKEYT ++ K  A+ EW
Sbjct: 376  TGRTHQIRVQLADYGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKENAVAEW 435

Query: 114  IAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
            IA HGKEP+VAIGLQA  ISWD GEH Y AG+PWWR
Sbjct: 436  IALHGKEPAVAIGLQAYEISWDSGEHIYNAGTPWWR 471