BLASTX nr result
ID: Rehmannia22_contig00024698
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00024698
(388 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006489869.1| PREDICTED: DNA helicase INO80-like [Citrus s... 77 2e-12
ref|XP_004236584.1| PREDICTED: DNA helicase INO80-like [Solanum ... 77 2e-12
ref|XP_006358007.1| PREDICTED: DNA helicase INO80-like [Solanum ... 77 3e-12
ref|XP_006421159.1| hypothetical protein CICLE_v10004142mg [Citr... 75 7e-12
ref|XP_006421158.1| hypothetical protein CICLE_v10004142mg [Citr... 75 7e-12
ref|XP_002323271.2| transcriptional activator family protein [Po... 72 8e-11
ref|XP_002308925.2| transcriptional activator family protein [Po... 70 2e-10
emb|CBI29799.3| unnamed protein product [Vitis vinifera] 69 8e-10
ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vi... 69 8e-10
ref|XP_002533847.1| conserved hypothetical protein [Ricinus comm... 68 1e-09
gb|ABK95567.1| unknown [Populus trichocarpa] 65 7e-09
gb|EXB39079.1| DNA helicase INO80 [Morus notabilis] 57 3e-06
ref|XP_004161718.1| PREDICTED: LOW QUALITY PROTEIN: DNA helicase... 55 1e-05
ref|XP_004142662.1| PREDICTED: DNA helicase INO80-like [Cucumis ... 55 1e-05
>ref|XP_006489869.1| PREDICTED: DNA helicase INO80-like [Citrus sinensis]
Length = 1524
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/66 (54%), Positives = 46/66 (69%)
Frame = -1
Query: 382 PRPQKTSKQVDSSSPNPTITDYDLDDPPQNTDTPQQRPKRLKRPTKSVNENIEPAFTATP 203
P+ + T K ++ P T+ DY+LDDP Q TD QRPKR+KRP KS+NEN+EPAFTATP
Sbjct: 1449 PKARSTQK---TNEPASTVMDYELDDPLQATDPQSQRPKRVKRPKKSINENLEPAFTATP 1505
Query: 202 NVFQHQ 185
+ Q
Sbjct: 1506 STMSEQ 1511
>ref|XP_004236584.1| PREDICTED: DNA helicase INO80-like [Solanum lycopersicum]
Length = 1539
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/61 (62%), Positives = 45/61 (73%)
Frame = -1
Query: 388 PKPRPQKTSKQVDSSSPNPTITDYDLDDPPQNTDTPQQRPKRLKRPTKSVNENIEPAFTA 209
P+ RPQK K + S+SPN + D D+D PQN QQRPKR KRPTKSVNE++EPAFTA
Sbjct: 1442 PRSRPQKNPKNLQSASPNSLLED-DIDGFPQNIGMQQQRPKRQKRPTKSVNESLEPAFTA 1500
Query: 208 T 206
T
Sbjct: 1501 T 1501
>ref|XP_006358007.1| PREDICTED: DNA helicase INO80-like [Solanum tuberosum]
Length = 1539
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/61 (62%), Positives = 45/61 (73%)
Frame = -1
Query: 388 PKPRPQKTSKQVDSSSPNPTITDYDLDDPPQNTDTPQQRPKRLKRPTKSVNENIEPAFTA 209
P+ RPQK K + S+SPN + D D+D PQN QQRPKR KRPTKSVNE++EPAFTA
Sbjct: 1442 PRSRPQKNPKNLQSASPNSLMED-DIDGFPQNIGMQQQRPKRQKRPTKSVNESLEPAFTA 1500
Query: 208 T 206
T
Sbjct: 1501 T 1501
>ref|XP_006421159.1| hypothetical protein CICLE_v10004142mg [Citrus clementina]
gi|557523032|gb|ESR34399.1| hypothetical protein
CICLE_v10004142mg [Citrus clementina]
Length = 1524
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/66 (53%), Positives = 45/66 (68%)
Frame = -1
Query: 382 PRPQKTSKQVDSSSPNPTITDYDLDDPPQNTDTPQQRPKRLKRPTKSVNENIEPAFTATP 203
P+ + T K ++ P T+ DY+LDDP Q D QRPKR+KRP KS+NEN+EPAFTATP
Sbjct: 1449 PKARSTQK---TNEPASTVMDYELDDPLQAADPQSQRPKRVKRPKKSINENLEPAFTATP 1505
Query: 202 NVFQHQ 185
+ Q
Sbjct: 1506 STMSEQ 1511
>ref|XP_006421158.1| hypothetical protein CICLE_v10004142mg [Citrus clementina]
gi|557523031|gb|ESR34398.1| hypothetical protein
CICLE_v10004142mg [Citrus clementina]
Length = 1059
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/66 (53%), Positives = 45/66 (68%)
Frame = -1
Query: 382 PRPQKTSKQVDSSSPNPTITDYDLDDPPQNTDTPQQRPKRLKRPTKSVNENIEPAFTATP 203
P+ + T K ++ P T+ DY+LDDP Q D QRPKR+KRP KS+NEN+EPAFTATP
Sbjct: 984 PKARSTQK---TNEPASTVMDYELDDPLQAADPQSQRPKRVKRPKKSINENLEPAFTATP 1040
Query: 202 NVFQHQ 185
+ Q
Sbjct: 1041 STMSEQ 1046
>ref|XP_002323271.2| transcriptional activator family protein [Populus trichocarpa]
gi|550320801|gb|EEF05032.2| transcriptional activator
family protein [Populus trichocarpa]
Length = 1535
Score = 72.0 bits (175), Expect = 8e-11
Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Frame = -1
Query: 373 QKTSKQVDS--SSPNPTITDYDLDDPPQNTDTPQQRPKRLKRPTKSVNENIEPAFTATPN 200
Q TSK +S + PN + DY+LDDP N++ QRPKRLKRP KSVNE +EPAFTATP+
Sbjct: 1455 QITSKPRNSQKNEPNSSPMDYELDDPFPNSEPQSQRPKRLKRPKKSVNEKLEPAFTATPS 1514
Query: 199 VFQHQ 185
+ Q
Sbjct: 1515 IDSSQ 1519
>ref|XP_002308925.2| transcriptional activator family protein [Populus trichocarpa]
gi|550335455|gb|EEE92448.2| transcriptional activator
family protein [Populus trichocarpa]
Length = 1483
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/66 (54%), Positives = 43/66 (65%)
Frame = -1
Query: 382 PRPQKTSKQVDSSSPNPTITDYDLDDPPQNTDTPQQRPKRLKRPTKSVNENIEPAFTATP 203
P+P+ + K + N T DY+LDDP N + QRPKRLKRP KSVNE +EPAFTATP
Sbjct: 1406 PKPRNSQK----NELNSTSMDYELDDPFLNDEPQSQRPKRLKRPKKSVNEKLEPAFTATP 1461
Query: 202 NVFQHQ 185
V Q
Sbjct: 1462 QVDSSQ 1467
>emb|CBI29799.3| unnamed protein product [Vitis vinifera]
Length = 1557
Score = 68.6 bits (166), Expect = 8e-10
Identities = 38/64 (59%), Positives = 42/64 (65%), Gaps = 5/64 (7%)
Frame = -1
Query: 388 PKPR-PQKTSKQVDS----SSPNPTITDYDLDDPPQNTDTPQQRPKRLKRPTKSVNENIE 224
PKPR QK K VDS + PN DY+LDD QN D Q+ KR KRPTKSVNEN+E
Sbjct: 1456 PKPRNSQKAMKNVDSYTGMTDPNSMAMDYELDDSLQNDDMQLQKHKRPKRPTKSVNENLE 1515
Query: 223 PAFT 212
PAFT
Sbjct: 1516 PAFT 1519
>ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vinifera]
Length = 1563
Score = 68.6 bits (166), Expect = 8e-10
Identities = 38/64 (59%), Positives = 42/64 (65%), Gaps = 5/64 (7%)
Frame = -1
Query: 388 PKPR-PQKTSKQVDS----SSPNPTITDYDLDDPPQNTDTPQQRPKRLKRPTKSVNENIE 224
PKPR QK K VDS + PN DY+LDD QN D Q+ KR KRPTKSVNEN+E
Sbjct: 1462 PKPRNSQKAMKNVDSYTGMTDPNSMAMDYELDDSLQNDDMQLQKHKRPKRPTKSVNENLE 1521
Query: 223 PAFT 212
PAFT
Sbjct: 1522 PAFT 1525
>ref|XP_002533847.1| conserved hypothetical protein [Ricinus communis]
gi|223526214|gb|EEF28538.1| conserved hypothetical
protein [Ricinus communis]
Length = 110
Score = 67.8 bits (164), Expect = 1e-09
Identities = 34/60 (56%), Positives = 42/60 (70%)
Frame = -1
Query: 382 PRPQKTSKQVDSSSPNPTITDYDLDDPPQNTDTPQQRPKRLKRPTKSVNENIEPAFTATP 203
P+P+ + K +S+S T+ DY+LDD NTD QR KR KR KSVNEN+EPAFTATP
Sbjct: 26 PKPRNSQKMNESNS---TLADYELDDSLPNTDQQSQRSKRPKRTKKSVNENLEPAFTATP 82
>gb|ABK95567.1| unknown [Populus trichocarpa]
Length = 63
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/46 (67%), Positives = 34/46 (73%)
Frame = -1
Query: 322 DYDLDDPPQNTDTPQQRPKRLKRPTKSVNENIEPAFTATPNVFQHQ 185
DY+LDDP N + QRPKRLKRP KSVNE +EPAFTATP V Q
Sbjct: 2 DYELDDPFLNDEPQSQRPKRLKRPKKSVNEKLEPAFTATPQVDSSQ 47
>gb|EXB39079.1| DNA helicase INO80 [Morus notabilis]
Length = 1502
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/55 (50%), Positives = 34/55 (61%)
Frame = -1
Query: 370 KTSKQVDSSSPNPTITDYDLDDPPQNTDTPQQRPKRLKRPTKSVNENIEPAFTAT 206
K+ + PN D+D DD PQNTD+ + KR KRP KSVNEN+EP FT T
Sbjct: 1413 KSRNAQTADEPNSMSMDFDFDDTPQNTDS-MPKSKRPKRPKKSVNENLEPVFTPT 1466
>ref|XP_004161718.1| PREDICTED: LOW QUALITY PROTEIN: DNA helicase INO80-like [Cucumis
sativus]
Length = 711
Score = 55.1 bits (131), Expect = 1e-05
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Frame = -1
Query: 382 PRPQKTSK-----QVDSSSPNPTITDYDLDDPPQNTDTPQQRPKRLKRPTKSVNENIEPA 218
P Q +SK +++ SP + D+DLD+ QN + Q+PKR KRPTKSVNEN+ P
Sbjct: 645 PEKQNSSKARSLQRINEMSP---VVDFDLDESRQNLEPQTQKPKRPKRPTKSVNENLVPT 701
Query: 217 FTAT 206
T+T
Sbjct: 702 TTST 705
>ref|XP_004142662.1| PREDICTED: DNA helicase INO80-like [Cucumis sativus]
Length = 1501
Score = 55.1 bits (131), Expect = 1e-05
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Frame = -1
Query: 382 PRPQKTSK-----QVDSSSPNPTITDYDLDDPPQNTDTPQQRPKRLKRPTKSVNENIEPA 218
P Q +SK +++ SP + D+DLD+ QN + Q+PKR KRPTKSVNEN+ P
Sbjct: 1435 PEKQNSSKARSLQRINEMSP---VVDFDLDESRQNLEPQTQKPKRPKRPTKSVNENLVPT 1491
Query: 217 FTAT 206
T+T
Sbjct: 1492 TTST 1495