BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00024638
         (3259 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]   762   0.0  
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   729   0.0  
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   670   0.0  
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     666   0.0  
gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                       864   0.0  
emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group]        641   0.0  
emb|CDF77009.1| hypothetical transposable element-related protei...   612   0.0  
emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group]        637   0.0  
gb|AAT69633.1| putative polyprotein [Oryza sativa Japonica Group]     637   0.0  
gb|ABF96044.1| transposon protein, putative, unclassified [Oryza...   636   0.0  
gb|ABF94883.1| transposon protein, putative, unclassified [Oryza...   635   0.0  
gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subc...   623   0.0  
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl...   603   0.0  
emb|CAE03910.2| OSJNBb0015G09.4 [Oryza sativa Japonica Group]         625   0.0  
emb|CAN78154.1| hypothetical protein VITISV_032622 [Vitis vinifera]   590   0.0  
emb|CAH67504.1| OSIGBa0134H18.6 [Oryza sativa Indica Group]           608   0.0  
gb|ABA94504.1| transposon protein, putative, unclassified [Oryza...   627   0.0  
emb|CAN74511.1| hypothetical protein VITISV_011891 [Vitis vinifera]   591   0.0  
gb|AAS98437.1| putative polyprotein [Oryza sativa Japonica Group]     589   0.0  
gb|ABA97777.1| transposon protein, putative, unclassified [Oryza...   588   0.0  

>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
          Length = 1285

 Score =  762 bits (1967), Expect(2) = 0.0
 Identities = 431/862 (50%), Positives = 525/862 (60%), Gaps = 33/862 (3%)
 Frame = +2

Query: 2    GFQVTRELNEGEHTLRXXXXXXXXXXXXXXXYLYFSNNKHLVLKNCYYVPDITRNLIYVA 181
            GFQ TR+L++GE  +                 L F NN+ L LKN  YVP I RNLI V+
Sbjct: 277  GFQETRQLSKGEVNIFLGDGTEVAVLAVGNIALNFKNNRILSLKNVLYVPSIRRNLISVS 336

Query: 182  LLFKQGYYVHFSPM---AVDITLNKALICKGHVNNDLYTLKPSDSSLHHTTSN------- 331
             L K GY V F+     +V I   + +IC G + + LY LK +   L  T S        
Sbjct: 337  SLSKNGYSVCFNEFYDDSVVIKFREQIICSGSLIDGLYILKVTPE-LQLTNSEVNNFDIV 395

Query: 332  ---KRMKLYPTNETYLWHLRLGHINLHRIQRLVRDGPLNDIKVESLPVCESCLEGKMTKR 502
               KR      + TYLWHLRLGHINL RI  LV+DGPL+ +KVE+LP CESCLEGKMT R
Sbjct: 396  APLKRKCPIELSYTYLWHLRLGHINLDRISLLVKDGPLSSLKVEALPTCESCLEGKMTNR 455

Query: 503  SFTSKGLRAKQVLELVHSDVCGPISVQARGGYEYFITFTDDYSRYGYVYLMTRKSEALEK 682
             F  KG RA  VLEL+HSD+CGP+SVQARGG+EYF+TFT DYSRYGY+YL+ RKSE  EK
Sbjct: 456  PFPLKGNRANDVLELIHSDLCGPMSVQARGGFEYFVTFTYDYSRYGYIYLLRRKSECFEK 515

Query: 683  FKEFRSEAEKQLGKSIKILRSDRGGEYLSNDFRTYLSENGILSQLSAPGTPQQNGVSERR 862
            FK F++E EK+ GK IK LRSD GGEY+S +F T+LSE GI SQLSAP  P         
Sbjct: 516  FKAFKAETEKRHGKYIKTLRSDHGGEYISREFITFLSEQGITSQLSAPDLP--------- 566

Query: 863  NRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSKFVPKTPLELWNGRKPNLRHIR 1042
                               SF G+ I+TA Y+LN+V SK V KTP ELW GRKP+L+H+R
Sbjct: 567  ------------------ISFWGHVIETAAYILNLVPSKSVFKTPTELWTGRKPSLKHVR 608

Query: 1043 IWGCPAHVLKGKMEKMESRLEVCIFIGYPKGTRGYHFCSPQDKKVFVSTNATFLEDRYIE 1222
            +WGCP HVLKGK +K+E+++E C FIGYP+GT+G  F SP+DKK+ VSTNA +LE+ YI 
Sbjct: 609  MWGCPTHVLKGKTDKLETKIEFCFFIGYPRGTKGSLFYSPKDKKIIVSTNAHYLEEDYIR 668

Query: 1223 ECESKSKVLLEEMREN------LPSSSIPEI--------------RXXXXXXXXXXXXXL 1342
                KS++ L E+R +       PS   PE               R             L
Sbjct: 669  NHIPKSQLALNELRGDTIPARIFPSEHEPEPFMVRADIPLPQRSGRNVSGPEFETFDISL 728

Query: 1343 VAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQELVGXXXXXXXX 1522
              G      EAP  VP    I E++    P++  P     ++E   EQ +V         
Sbjct: 729  PVGDE-ENVEAPIHVPFEEHIDEVQDVVPPVINLPALQPQQDEGVAEQPVV--------- 778

Query: 1523 XXXXXVRRSGRVIRPPSRYLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRSAMDSEM 1702
                 +RRSGR  RPP RY L GE+F+ +  E   +P                      M
Sbjct: 779  -----LRRSGRTRRPPVRYTLLGEAFDRIPEEVNTEP----------------------M 811

Query: 1703 KSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARLVAKGFTQREGIDYEET 1882
            +SMY+  V +LV+ P GVKPIGCKW+YK+KRGIDGKV+TYKA+LVAKG+TQ+EGIDYEET
Sbjct: 812  ESMYSNQVWELVEPPKGVKPIGCKWIYKKKRGIDGKVQTYKAKLVAKGYTQKEGIDYEET 871

Query: 1883 FSPVAMLKSIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVC 2062
            FSPVAMLKSIRILLSIAA+FDYE+WQMDVKTAFLNGSLDE IYM Q +GFI  GQEH +C
Sbjct: 872  FSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGSLDECIYMKQLEGFITNGQEHLLC 931

Query: 2063 KLKKSIFGLKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLI 2242
            KL +SI+GLKQASRSWN  FDQ +K++GFDQ  D  CVYKK    KV FL          
Sbjct: 932  KLNRSIYGLKQASRSWNTCFDQTIKTFGFDQCHDVSCVYKKWNGKKVVFL---------- 981

Query: 2243 GNDIGMLTSAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAM 2422
                            +FDMK LGEA+++LGI++ R+RK + I LSQA YID IL RF M
Sbjct: 982  ----------------RFDMKYLGEAAHILGIKLMRNRKKRMIGLSQALYIDTILNRFNM 1025

Query: 2423 QNSKKGQTPFRHGIHLSRGALP 2488
            Q SKKG  PFRHGI LS+   P
Sbjct: 1026 QGSKKGFLPFRHGIVLSKDQSP 1047



 Score =  355 bits (912), Expect(2) = 0.0
 Identities = 169/235 (71%), Positives = 198/235 (84%)
 Frame = +3

Query: 2478 EHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKH 2657
            +  PKTP E+E MK VPYASAVGSLMYAMLCTRPDI +AVG+VSR+QSNPG EHW AVKH
Sbjct: 1044 DQSPKTPEEIESMKAVPYASAVGSLMYAMLCTRPDIYFAVGMVSRFQSNPGREHWTAVKH 1103

Query: 2658 ILKYLRRTRGYMLVYSATDLVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQS 2837
            I+KYL+RTR YMLV+ + +LVP+GYTDSDFQ+D+D+R STSG+VF LGGGA+ WRSIKQ+
Sbjct: 1104 IIKYLKRTRDYMLVFQSENLVPIGYTDSDFQSDQDSRKSTSGNVFVLGGGAISWRSIKQT 1163

Query: 2838 CIADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNH 3017
            C+AD TMEAEYVAA EAAKEAVWLRNFLL + +VP     ITLYCDNSGAVAN++EPR+H
Sbjct: 1164 CVADFTMEAEYVAASEAAKEAVWLRNFLLDLGVVPSVQSPITLYCDNSGAVANSKEPRSH 1223

Query: 3018 QRGKHIERKYHLVRDIVQRGDVLVSKIPSAEKSC*PFTKSLPTRSFEGHIESMGV 3182
            +R KHI RKYHL+RDIVQRGDV+V KI S      PFTKSL + +FE H+E MGV
Sbjct: 1224 KRAKHIXRKYHLIRDIVQRGDVVVMKIASENNLADPFTKSLSSTTFERHVEGMGV 1278


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
            putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  729 bits (1881), Expect(2) = 0.0
 Identities = 394/799 (49%), Positives = 498/799 (62%), Gaps = 10/799 (1%)
 Frame = +2

Query: 122  LVLKNCYYVPDITRNLIYVALLFKQGYYVHFSPMAVDITLNKALICKGHVNNDLYTLKPS 301
            L LKNCYYVP I +N+I V+ L  +G+  HFS         K   C    ++  Y   P 
Sbjct: 3    LELKNCYYVPAINKNIISVSCLDMEGF--HFSI--------KNKCCSFDRDDMFYGSAPL 52

Query: 302  DSSLH--------HTTSNKRMKLYPTNETYLWHLRLGHINLHRIQRLVRDGPLNDIKVES 457
            D+ LH        +    K+ K    N T+LWH RLGHIN   IQ+L  DG LN    ES
Sbjct: 53   DNGLHVLNQSMPIYNIRTKKFKSNDLNPTFLWHCRLGHINEKHIQKLHSDGLLNSFDYES 112

Query: 458  LPVCESCLEGKMTKRSFTSKGLRAKQVLELVHSDVCGPISVQARGGYEYFITFTDDYSRY 637
               CESCL GKMTK  FT    RA  +L L+H+DVCGP+S  ARG Y+YFITFTDD+SRY
Sbjct: 113  YETCESCLLGKMTKAPFTGHSERASDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRY 172

Query: 638  GYVYLMTRKSEALEKFKEFRSEAEKQLGKSIKILRSDRGGEYLSNDFRTYLSENGILSQL 817
            GYVYLM  KS++ E FKEF++E + Q GKSIK LRSDRGGEYLS  F  +L E GI+SQL
Sbjct: 173  GYVYLMKHKSKSFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQL 232

Query: 818  SAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSKFVPKTP 997
            + PGTPQ NGVSERRNRTLLDMVRSM+  + L + F GYA++T+ ++LN   SK V KTP
Sbjct: 233  TPPGTPQWNGVSERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSVEKTP 292

Query: 998  LELWNGRKPNLRHIRIWGCPAHVLKGKMEKMESRLEVCIFIGYPKGTRGYHFCSPQDKKV 1177
             E+W G+ PNL  ++IWGC ++  +   +K+  + + C F+GYPK T+GY+F  P D KV
Sbjct: 293  YEIWTGKVPNLSFLKIWGCESYAKRLITDKLGPKSDKCYFVGYPKETKGYYFYHPTDNKV 352

Query: 1178 FVSTNATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXXLVAGSS 1357
            FV  N  FLE  ++ +  S SKVLLE            E+R                   
Sbjct: 353  FVVRNGAFLEREFLSKGTSGSKVLLE------------EVR------------------- 381

Query: 1358 GRQTEAPPTVPTRSPIPEMEGDRV--PIVQTPLGAKDENEEHREQELVGXXXXXXXXXXX 1531
                E    VPT     +++  RV  PI+  P                            
Sbjct: 382  ----EPQGDVPTSQEEHQLDLRRVVEPILVEP---------------------------- 409

Query: 1532 XXVRRSGRVIRPPSRYLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRSAMDSEMKSM 1711
              VRRS R    P R+  +     A+   + ++PTSY+EA+   D D W  A  SEM+SM
Sbjct: 410  -EVRRSERSRHEPDRFRDWVMDDHALFMIESDEPTSYEEALMGPDSDKWLEAAKSEMESM 468

Query: 1712 YTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARLVAKGFTQREGIDYEETFSP 1891
                V  LVDLP+GVKPI CKW++K+K  +DG ++ YKA LVAKG+ Q  GIDY+ET+SP
Sbjct: 469  SQNKVWTLVDLPDGVKPIECKWIFKKKIDMDGNIQIYKAGLVAKGYKQVHGIDYDETYSP 528

Query: 1892 VAMLKSIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLK 2071
            VAMLKSIRILL+ AAH+DYE+WQMDVKTAFLNG+L+E +YM QP+GF       +VCKL 
Sbjct: 529  VAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPEGFTVPEAARKVCKLH 588

Query: 2072 KSIFGLKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGND 2251
            +SI+GLKQASRSWN++F++A+K + F +N +EPCVYKK   + V FLVLYVDDILL+GND
Sbjct: 589  RSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAFLVLYVDDILLLGND 648

Query: 2252 IGMLTSAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNS 2431
            I +L S K WL   F MKD+GEA+Y+LGIRI+RDR NK I LSQ +YID +L RF M +S
Sbjct: 649  IPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDKVLHRFNMHDS 708

Query: 2432 KKGQTPFRHGIHLSRGALP 2488
            KKG  P  HGI LS+   P
Sbjct: 709  KKGFIPMSHGITLSKTQCP 727



 Score =  268 bits (684), Expect(2) = 0.0
 Identities = 127/234 (54%), Positives = 166/234 (70%), Gaps = 1/234 (0%)
 Frame = +3

Query: 2484 CPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKHIL 2663
            CP T  E E M K+PYASA+GS+MYAML TRPD+  A+ + SRYQS+PG  HWI V++I 
Sbjct: 726  CPSTHDERERMSKIPYASAIGSIMYAMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIF 785

Query: 2664 KYLRRTRGYMLVYSATD-LVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQSC 2840
            KYLRRT+   LVY  ++ LV  GYTD+ FQ D+D   S SG  F L GGAV W+S KQS 
Sbjct: 786  KYLRRTKDKFLVYGGSEELVVSGYTDASFQTDKDDFRSQSGFFFCLNGGAVSWKSTKQST 845

Query: 2841 IADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNHQ 3020
            +ADST EAEY+AA EAAKE VW+R F+  + +VP  S  I LYCDN+GA+A A+EP++HQ
Sbjct: 846  VADSTTEAEYIAASEAAKEVVWIRKFITELGVVPSISGPIDLYCDNNGAIAQAKEPKSHQ 905

Query: 3021 RGKHIERKYHLVRDIVQRGDVLVSKIPSAEKSC*PFTKSLPTRSFEGHIESMGV 3182
            + KHI+R+YHL+R+I+ RGDV +S++ +       FTK LP    E H  ++G+
Sbjct: 906  KSKHIQRRYHLIREIIDRGDVKISRVSTDANVADHFTKPLPQPKHESHTTAIGI 959


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  670 bits (1729), Expect(2) = 0.0
 Identities = 361/778 (46%), Positives = 478/778 (61%)
 Frame = +2

Query: 155  ITRNLIYVALLFKQGYYVHFSPMAVDITLNKALICKGHVNNDLYTLKPSDSSLHHTTSNK 334
            +  N+I  + L  +GY          +  N        + N LY +     S+++  + K
Sbjct: 334  LCNNVISTSCLQAEGYGFRSVDNGCSVYYNDIFYFHAPMMNGLYIVNLDGCSVYNINA-K 392

Query: 335  RMKLYPTNETYLWHLRLGHINLHRIQRLVRDGPLNDIKVESLPVCESCLEGKMTKRSFTS 514
            R +    N T++WH  LGHIN  RI++L RDG L+    ES   CESCL GKMTK  FT 
Sbjct: 393  RQRPNNLNPTFIWHCCLGHINEKRIEKLHRDGLLHSFDFESFKTCESCLLGKMTKAPFTG 452

Query: 515  KGLRAKQVLELVHSDVCGPISVQARGGYEYFITFTDDYSRYGYVYLMTRKSEALEKFKEF 694
            +  RA ++L LVH+DVCGP+S  ARGG+ YFITFTD++SRYGYVYLM  KSE+ EKF+EF
Sbjct: 453  QSERASELLGLVHTDVCGPMSSTARGGFGYFITFTDEFSRYGYVYLMRHKSESFEKFQEF 512

Query: 695  RSEAEKQLGKSIKILRSDRGGEYLSNDFRTYLSENGILSQLSAPGTPQQNGVSERRNRTL 874
            ++E +  LGK+IK LRSDRGGEYLS ++  +L E GI+ QL+ PGTPQ N VSERRNR L
Sbjct: 513  QNEVQNHLGKTIKYLRSDRGGEYLSLEYGNHLKECGIVPQLTPPGTPQWNAVSERRNRIL 572

Query: 875  LDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSKFVPKTPLELWNGRKPNLRHIRIWGC 1054
            LDMVRSM+  + +  SF GYA++TA + LN V SK V KTP E+W G++P+L  ++IW C
Sbjct: 573  LDMVRSMMSQTDMPLSFWGYALETAAFTLNRVPSKSVDKTPYEIWTGKRPSLSFLKIWCC 632

Query: 1055 PAHVLKGKMEKMESRLEVCIFIGYPKGTRGYHFCSPQDKKVFVSTNATFLEDRYIEECES 1234
                                     + T+GY+F + ++ KVFV+ +  FLE  +I   +S
Sbjct: 633  -------------------------EETKGYYFYNREEGKVFVARHGVFLEKEFISRKDS 667

Query: 1235 KSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXXLVAGSSGRQTEAPPTVPTRSPIPEM 1414
             S V L+E++E   ++S                      S+  Q E          + E 
Sbjct: 668  GSMVRLKEIQETPENAST---------------------STQPQVEQDVVQQVEQVVVE- 705

Query: 1415 EGDRVPIVQTPLGAKDENEEHREQELVGXXXXXXXXXXXXXVRRSGRVIRPPSRYLLYGE 1594
                 P+V+ P                               RRS R+ R P+RY L   
Sbjct: 706  -----PVVEAPAS-----------------------------RRSERIRRTPARYALLTS 731

Query: 1595 SFEAVSTEQEEDPTSYKEAMEDIDVDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIGCK 1774
                +     ++PT+Y+EAM   D + W  AM SE++SM+   V +LVD P+GVK I CK
Sbjct: 732  GQRDILLLDNDEPTTYEEAMVGPDTEKWLGAMKSEIESMHVNQVWNLVDPPDGVKAIECK 791

Query: 1775 WVYKRKRGIDGKVETYKARLVAKGFTQREGIDYEETFSPVAMLKSIRILLSIAAHFDYEV 1954
            W++K+   +DG V  Y ARLVAKGF Q +G+DY+ETFSPVAMLKSIRI+L+IAA+FDYE+
Sbjct: 792  WIFKKMTDVDGTVHIYNARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEI 851

Query: 1955 WQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFGLKQASRSWNIKFDQAV 2134
            WQMDVKTAFLNG+LDE +YM QP GF+      ++CKL+KSI+ LKQASRSWNI+FD+ V
Sbjct: 852  WQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYRLKQASRSWNIRFDEVV 911

Query: 2135 KSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLTSAKCWLAQQFDMKDLG 2314
            K+ GF +N +EPCVYKKI  + + FL+LYVDDILLIGNDI ML S K  L   F MKDLG
Sbjct: 912  KALGFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVKTSLKYSFSMKDLG 971

Query: 2315 EASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQTPFRHGIHLSRGALP 2488
            EA+Y+LGIRI+RDR  + I LSQ++YID +L+RF MQ+SKKG  P  HGI+L +   P
Sbjct: 972  EAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCP 1029



 Score =  254 bits (649), Expect(2) = 0.0
 Identities = 126/221 (57%), Positives = 158/221 (71%), Gaps = 1/221 (0%)
 Frame = +3

Query: 2484 CPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKHIL 2663
            CP+T  E   M  +PYASA+GS+MYAMLCTR D+ YA+   SRYQS+ G  HWIAVK+IL
Sbjct: 1028 CPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNIL 1087

Query: 2664 KYLRRTRGYMLVYSATD-LVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQSC 2840
            KYLRRT+   LVY   + LV  GYTD+ FQ D+D   S SG VF L GGAV W+S KQ  
Sbjct: 1088 KYLRRTKDMFLVYGRQEELVVNGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDT 1147

Query: 2841 IADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNHQ 3020
            +ADST EAEY+AA EAAKEAVW++ F+  + ++  AS  + LYCDNSGA+A A+EPR+HQ
Sbjct: 1148 VADSTTEAEYIAASEAAKEAVWIKKFVSQLGVMTSASSPMDLYCDNSGAIAQAKEPRSHQ 1207

Query: 3021 RGKHIERKYHLVRDIVQRGDVLVSKIPSAEKSC*PFTKSLP 3143
            + KHI R+YHL+R++V RGDV + KI +      P TK LP
Sbjct: 1208 KSKHILRRYHLIREMVGRGDVKICKIHTDLNVADPLTKPLP 1248


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  666 bits (1719), Expect(2) = 0.0
 Identities = 355/738 (48%), Positives = 466/738 (63%)
 Frame = +2

Query: 275  NDLYTLKPSDSSLHHTTSNKRMKLYPTNETYLWHLRLGHINLHRIQRLVRDGPLNDIKVE 454
            N LY +     S+++  + KR +    N T++WH  LGHIN  RI++L RDG L+    E
Sbjct: 287  NGLYIVNLDGCSVYNINA-KRQRPNNLNPTFIWHCCLGHINEKRIEKLHRDGLLHSFDFE 345

Query: 455  SLPVCESCLEGKMTKRSFTSKGLRAKQVLELVHSDVCGPISVQARGGYEYFITFTDDYSR 634
            S   CESCL GKMTK  FT +  RA ++L LVH+DVCGP+S  ARGG+ YFITFTD++SR
Sbjct: 346  SFKTCESCLLGKMTKAPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITFTDEFSR 405

Query: 635  YGYVYLMTRKSEALEKFKEFRSEAEKQLGKSIKILRSDRGGEYLSNDFRTYLSENGILSQ 814
            YGYVYLM  KSE+ EKF+EF++E +  LGK+IK LRSDRGGEYLS ++  +L E GI+ Q
Sbjct: 406  YGYVYLMRHKSESFEKFQEFQNEVQNHLGKTIKYLRSDRGGEYLSLEYGNHLKECGIVPQ 465

Query: 815  LSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSKFVPKT 994
            L+ PGTPQ N VSERRNR LLDMVRSM+  + +  SF GYA++TA + LN V SK V KT
Sbjct: 466  LTPPGTPQWNAVSERRNRILLDMVRSMMSQTDMPLSFWGYALETAAFTLNRVPSKSVDKT 525

Query: 995  PLELWNGRKPNLRHIRIWGCPAHVLKGKMEKMESRLEVCIFIGYPKGTRGYHFCSPQDKK 1174
            P E+W G++P+L  ++IW C                         + T+GY+F + ++ K
Sbjct: 526  PYEIWTGKRPSLSFLKIWCC-------------------------EETKGYYFYNREEGK 560

Query: 1175 VFVSTNATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXXLVAGS 1354
            VFV+ +  FLE  +I   +S S V L+E++E   ++S                      S
Sbjct: 561  VFVARHGVFLEKEFISRKDSGSMVRLKEIQETPENAST---------------------S 599

Query: 1355 SGRQTEAPPTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQELVGXXXXXXXXXXXX 1534
            +  Q E          + E      P+V+ P                             
Sbjct: 600  TQPQVEQDVVQQVEQVVVE------PVVEAPAS--------------------------- 626

Query: 1535 XVRRSGRVIRPPSRYLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRSAMDSEMKSMY 1714
              RRS R+ R P+RY L       +     ++PT+Y+EAM   D + W  AM SE++SM+
Sbjct: 627  --RRSERIRRTPARYALLTSGQRDILLLDNDEPTTYEEAMVGPDTEKWLGAMKSEIESMH 684

Query: 1715 TKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARLVAKGFTQREGIDYEETFSPV 1894
               V +LVD P+GVK I CKW++K+   +DG V  Y ARLVAKGF Q +G+DY+ETFSPV
Sbjct: 685  VNQVWNLVDPPDGVKAIECKWIFKKMTDVDGTVHIYNARLVAKGFRQIQGVDYDETFSPV 744

Query: 1895 AMLKSIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKK 2074
            AMLKSIRI+L+IAA+FDYE+WQMDVKTAFLNG+LDE +YM QP GF+      ++CKL+K
Sbjct: 745  AMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQK 804

Query: 2075 SIFGLKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDI 2254
            SI+ LKQASRSWNI+FD+ VK+ GF +N +EPCVYKKI  + + FL+LYVDDILLIGNDI
Sbjct: 805  SIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDI 864

Query: 2255 GMLTSAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSK 2434
             ML S K  L   F MKDLGEA+Y+LGIRI+RDR  + I LSQ++YID +L+RF MQ+SK
Sbjct: 865  PMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSK 924

Query: 2435 KGQTPFRHGIHLSRGALP 2488
            KG  P  HGI+L +   P
Sbjct: 925  KGFLPMSHGINLGKNQCP 942



 Score =  254 bits (649), Expect(2) = 0.0
 Identities = 126/221 (57%), Positives = 158/221 (71%), Gaps = 1/221 (0%)
 Frame = +3

Query: 2484 CPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKHIL 2663
            CP+T  E   M  +PYASA+GS+MYAMLCTR D+ YA+   SRYQS+ G  HWIAVK+IL
Sbjct: 941  CPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNIL 1000

Query: 2664 KYLRRTRGYMLVYSATD-LVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQSC 2840
            KYLRRT+   LVY   + LV  GYTD+ FQ D+D   S SG VF L GGAV W+S KQ  
Sbjct: 1001 KYLRRTKDMFLVYGRQEELVVNGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDT 1060

Query: 2841 IADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNHQ 3020
            +ADST EAEY+AA EAAKEAVW++ F+  + ++  AS  + LYCDNSGA+A A+EPR+HQ
Sbjct: 1061 VADSTTEAEYIAASEAAKEAVWIKKFVSQLGVMTSASSPMDLYCDNSGAIAQAKEPRSHQ 1120

Query: 3021 RGKHIERKYHLVRDIVQRGDVLVSKIPSAEKSC*PFTKSLP 3143
            + KHI R+YHL+R++V RGDV + KI +      P TK LP
Sbjct: 1121 KSKHILRRYHLIREMVGRGDVKICKIHTDLNVADPLTKPLP 1161


>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score =  864 bits (2232), Expect = 0.0
 Identities = 461/868 (53%), Positives = 585/868 (67%), Gaps = 17/868 (1%)
 Frame = +2

Query: 17   RELNEGEHTLRXXXXXXXXXXXXXXXYLYFSNNKHLVLKNCYYVPDITRNLIYVALLFKQ 196
            ++L EGE TL+                L+F + ++L+LK+  YVP + RNLI +A + + 
Sbjct: 322  KKLKEGEITLKVGTGEVVSAEAVGDLTLFFQD-RYLILKDVLYVPLMKRNLISIACILEH 380

Query: 197  GYYVHFSPMAVDITLNKALICKGHVNNDLYTLKPS------DSSLHHTTSNKRMKLYPTN 358
             Y + F    V I      IC     N+LY L+P+      ++ +  T   +  K   ++
Sbjct: 381  IYTISFEVNEVFILCKGIQICSAIRENNLYKLRPTRANVVLNTEMFRTLETQNKKQKVSS 440

Query: 359  ETYLWHLRLGHINLHRIQRLVRDGPLNDIKVESLPVCESCLEGKMTKRSFTSKGLRAKQV 538
              YLWHLRLGHINL+RI+RLV+ G LN ++  SLP CESCLEGKMTKRSFT KGLRAK  
Sbjct: 441  NAYLWHLRLGHINLNRIERLVKSGILNQLEDNSLPPCESCLEGKMTKRSFTGKGLRAKVP 500

Query: 539  LELVHSDVCGPISVQARGGYEYFITFTDDYSRYGYVYLMTRKSEALEKFKEFRSEAEKQL 718
            LELVHSD+CGP++V+ARGGYEYFI+F DD+SRYG+VYL+  KSE+ EKFKE+++E E ++
Sbjct: 501  LELVHSDLCGPMNVKARGGYEYFISFIDDFSRYGHVYLLHHKSESFEKFKEYKAEVENEI 560

Query: 719  GKSIKILRSDRGGEYLSNDFRTYLSENGILSQLSAPGTPQQNGVSERRNRTLLDMVRSML 898
            GK+IK LRSDRGGEY+ + F+ YL E GI SQLSAP TPQQNGVSERRNRTLLDMVRSM+
Sbjct: 561  GKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMM 620

Query: 899  GFSTLATSFCGYAIQTAVYLLNMVLSKFVPKTPLELWNGRKPNLRHIRIWGCPAHVLKGK 1078
             ++ L  SF GYA++TA+++LN V SK V +TP ELW GRK +LR+ RIWGCPAHVL   
Sbjct: 621  SYAQLPDSFWGYALETAIHILNNVPSKSVLETPYELWKGRKSSLRYFRIWGCPAHVLVQN 680

Query: 1079 MEKMESRLEVCIFIGYPKGTRGYHFCSPQDKKVFVSTNATFLEDRYIEECESKSKVLLEE 1258
             +K+E R ++C+F+GYPK +RG  F  PQ+ KVFVSTNATFLE+              + 
Sbjct: 681  PKKLEPRSKLCLFVGYPKESRGGLFYHPQENKVFVSTNATFLEE--------------DH 726

Query: 1259 MRENLPSSSIPEIRXXXXXXXXXXXXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIV 1438
             R + P S I                  V     +     P+  T+            +V
Sbjct: 727  XRNHQPRSKI------------------VLKEMFKNATDKPSSSTK------------VV 756

Query: 1439 QTPLGAKDENEEHREQELVGXXXXXXXXXXXXXVRRSGRVIRPPSRYLLYGESFEAVSTE 1618
                 A   ++ H  QEL                RRSGRV+  P+RYL   E+   +  +
Sbjct: 757  DK---ANISDQSHTSQEL-------------RVPRRSGRVVHQPNRYLGLVETQIIIPDD 800

Query: 1619 QEEDPTSYKEAMEDIDVDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRG 1798
              EDP +YK+AM D+D D W  AM+ EM+SMY  SV  LVDLP+ VKPIGCKW+YKRKR 
Sbjct: 801  GVEDPLTYKQAMNDVDRDQWIKAMNLEMESMYFNSVWTLVDLPSDVKPIGCKWIYKRKRD 860

Query: 1799 IDGKVETYKARLVAKGFTQREGIDYEETFSPVAMLKSIRILLSIAAHFDYEVWQMDVKTA 1978
              GKV+T+KARLVAKG+TQ+EG+DYEETFSPVAMLKSIRILLSIA  ++YE+WQMDVKTA
Sbjct: 861  QAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLSIATFYNYEIWQMDVKTA 920

Query: 1979 FLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFGLKQASRSWNIKFDQAVKSYGFDQN 2158
            FLNG+L+E IYM+QP+GFI + QE +VCKL+KSI+GLKQASRSWNI+FD A+KSYGF+QN
Sbjct: 921  FLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQN 980

Query: 2159 LDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLTSAKCWLAQQFDMKDLGEASYVLGI 2338
            +DEPCVYKKI ++ V FL+LYVDDILLIGND+  LT  K WL  QF MKDLGEA Y+LGI
Sbjct: 981  VDEPCVYKKIVNSVVAFLILYVDDILLIGNDVEYLTDVKKWLNTQFQMKDLGEAQYILGI 1040

Query: 2339 RIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQTPFRHGIHLSRGALP*DS**SGIHE 2518
            +I R+RKNK +A+SQASYID +L R+ MQNSKKGQ PFRHGIHLS+   P       + +
Sbjct: 1041 QIVRNRKNKTLAMSQASYIDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTP--QEVED 1098

Query: 2519 ---------EGSL--CLGCRKPHVCYAV 2569
                      GSL   + C +P +CY+V
Sbjct: 1099 MRNIPYSSAVGSLMYAMLCTRPDICYSV 1126



 Score =  342 bits (877), Expect = 6e-91
 Identities = 160/206 (77%), Positives = 183/206 (88%)
 Frame = +3

Query: 2478 EHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKH 2657
            E CPKTP EVE M+ +PY+SAVGSLMYAMLCTRPDICY+VGIVSRYQSNPG +HW AVK+
Sbjct: 1087 EQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKN 1146

Query: 2658 ILKYLRRTRGYMLVYSATDLVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQS 2837
            ILKYLRRTR YMLVY A DL+  GYTDSDFQ+D+D R STSGSVFTL GGAV+WRS+KQ+
Sbjct: 1147 ILKYLRRTRNYMLVYGAKDLILTGYTDSDFQSDKDARKSTSGSVFTLNGGAVVWRSVKQT 1206

Query: 2838 CIADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNH 3017
            CIADSTMEAEYVAACEAAKEAVWLR FL  +E+VP     ITLYCDNSGAVAN++EPR+H
Sbjct: 1207 CIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVANSKEPRSH 1266

Query: 3018 QRGKHIERKYHLVRDIVQRGDVLVSK 3095
            +RGKHIERKYHL+R+IV RGDV+V++
Sbjct: 1267 KRGKHIERKYHLIREIVHRGDVVVTQ 1292


>emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group]
          Length = 1405

 Score =  641 bits (1653), Expect(2) = 0.0
 Identities = 363/846 (42%), Positives = 489/846 (57%), Gaps = 27/846 (3%)
 Frame = +2

Query: 5    FQVTRELNEGEHTLRXXXXXXXXXXXXXXXYLYFSNNKHLVLKNCYYVPDITRNLIYVAL 184
            F+ TR     E T+R                L  +N   L+L++ +YVP + RNLI V+ 
Sbjct: 334  FRSTRTTQRRESTIRVANGVEEKVEAVGDLPLELANGFILLLRDVFYVPSLQRNLISVSK 393

Query: 185  LFKQGYYVHFSPMAVDITLNKALICKGHVNNDLYTLKPSD-----SSLHHTTSNKRMKLY 349
            L   GY   F     ++  N A I    + ++LY L  S+     SSL  T  NK+ K  
Sbjct: 394  LDFDGYDCRFGSGKCELWHNNACIGLAVLRDELYLLSLSENVNVVSSL--TKENKKRKRT 451

Query: 350  PTNETYLWHLRLGHINLHRIQRLVRDGPLNDIKVESLPVCESCLEGKMTKRSFTSKGLRA 529
            P   + LWH RLGHI+  RI+RLV++  L  ++   L  C  C++GK  K S      R+
Sbjct: 452  PDVSSKLWHCRLGHISRGRIERLVKNEILPPLEFSDLEQCIECIKGKFVK-SIKKGAKRS 510

Query: 530  KQVLELVHSDVCGPISVQARGGYEYFITFTDDYSRYGYVYLMTRKSEALEKFKEFRSEAE 709
              +LE++H+D+CGP  V++  GY+ FITFTDDYSRYGY+Y +  +SEAL+KFK F++E E
Sbjct: 511  AGILEIIHTDICGPFPVKSVDGYDSFITFTDDYSRYGYIYPIKERSEALDKFKIFKAEVE 570

Query: 710  KQLGKSIKILRSDRGGEY---------LSNDFRTYLSENGILSQLSAPGTPQQNGVSERR 862
             Q    IK++RSDRGGEY         +   F  +L ENGI++Q S PG PQQNGV+ERR
Sbjct: 571  NQHDIKIKVVRSDRGGEYYGRHTPYGQVPGPFARFLLENGIVAQYSTPGEPQQNGVAERR 630

Query: 863  NRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSKFVPKTPLELWNGRKPNLRHIR 1042
            NRTL+DMVRSM+ +STL       A++TA+++LN V SK VPKTP ELW GR P+L H+R
Sbjct: 631  NRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWTGRVPSLTHLR 690

Query: 1043 IWGCPAH--VLKGKMEKMESRLEVCIFIGYPKGTRGYHFCSPQDKKVFVST-NATFLEDR 1213
            +WG PA   V    + K++ +   C FIGYP+ ++GY F  P     FV T +A FLED 
Sbjct: 691  VWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRFYCPNSYTKFVETRHAVFLEDE 750

Query: 1214 YIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXXLVAGSSGRQTEAPPTVPT 1393
             I       ++ LEE R ++P+ S  E               +V      +  AP   P 
Sbjct: 751  MIRGSSVVREIDLEERRVSVPAPSTQE-------PFFSLPADVVPAMPVIEVPAPVVTP- 802

Query: 1394 RSPIPEMEGDRVPIVQ--TPLGAKDENEEHREQ------ELVGXXXXXXXXXXXXXVRRS 1549
              P+  M     P++Q  T + A  E E  + Q      +                 RRS
Sbjct: 803  --PVATMNESEEPVIQDSTEMVATPEEELQQPQIDNVPVQETHQEPQVQDVPNVQAPRRS 860

Query: 1550 GRVIRPPSR--YLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRSAMDSEMKSMYTKS 1723
             RV R   R  Y +Y        +  E+DPTSY+EAM       W  AM  EM+SM    
Sbjct: 861  ERVRRSAIRDDYKVYNIE----ESHMEDDPTSYEEAMRSARSSEWLEAMKDEMESMKLND 916

Query: 1724 V*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARLVAKGFTQREGIDYEETFSPVAML 1903
            V DL ++P G K +GCKWVYK K    G +E +KARLVAKGFTQREGIDY ETFSPV+  
Sbjct: 917  VWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARLVAKGFTQREGIDYNETFSPVSCK 976

Query: 1904 KSIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIF 2083
             S RI++++ AH+D E+ QMDVKTAFLNG L+E++YM QP GF+ KG E+  C+LK+SI+
Sbjct: 977  DSFRIIMALVAHYDLELHQMDVKTAFLNGDLEEKVYMAQPKGFVMKGNENMGCRLKRSIY 1036

Query: 2084 GLKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGML 2263
            GLKQASR W +KFD  +K +GF +N+++ C+Y K K+ +  FL+LYVDDILL  +D+ +L
Sbjct: 1037 GLKQASRQWYLKFDGTIKKFGFQENVEDNCIYSKFKNGRFIFLILYVDDILLASSDVSLL 1096

Query: 2264 TSAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQ 2443
               K +L+  FDMKDLGEASYVLGI I RDR    + LSQ +YI+ +L++F M       
Sbjct: 1097 QETKKFLSSNFDMKDLGEASYVLGIEIHRDRTKYALGLSQKTYIEKVLKKFNMYRCSATP 1156

Query: 2444 TPFRHG 2461
             P   G
Sbjct: 1157 APIMKG 1162



 Score =  205 bits (521), Expect(2) = 0.0
 Identities = 104/234 (44%), Positives = 146/234 (62%), Gaps = 1/234 (0%)
 Frame = +3

Query: 2484 CPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKHIL 2663
            CP+   E+  MK  PYASAVGSL YA +CTRPD+ +  G++ R+QSNPG EHW  VK +L
Sbjct: 1170 CPRNQYELNEMKTKPYASAVGSLQYAQVCTRPDLAFVTGLLGRFQSNPGLEHWKLVKKVL 1229

Query: 2664 KYLRRTRGYMLVYSATD-LVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQSC 2840
            +YL+ T+G ML Y  ++ L  VGY+DSDF   +D   STSG VFTL GGA+ W+S KQ+ 
Sbjct: 1230 RYLQGTKGLMLSYRRSESLQIVGYSDSDFA--KDNTKSTSGYVFTLAGGAISWKSSKQTI 1287

Query: 2841 IADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNHQ 3020
             A STM AE++A  EA  +  WL+ F+  +++V    + + LYCDN  AV  A   ++  
Sbjct: 1288 TAGSTMYAEFIACYEATGQVNWLKKFIPGLKVVDSIEKPLKLYCDNEPAVMYAHNNQSSG 1347

Query: 3021 RGKHIERKYHLVRDIVQRGDVLVSKIPSAEKSC*PFTKSLPTRSFEGHIESMGV 3182
              KHI+ KY++V+D V+   + +  I +      P TK LP   F+ H+  MG+
Sbjct: 1348 AAKHIDIKYYVVKDKVRDQTISLEHIKTERMLADPLTKGLPPNVFKEHVAGMGL 1401


>emb|CDF77009.1| hypothetical transposable element-related protein, partial [Boechera
            divaricarpa]
          Length = 1350

 Score =  612 bits (1579), Expect(2) = 0.0
 Identities = 346/807 (42%), Positives = 469/807 (58%), Gaps = 19/807 (2%)
 Frame = +2

Query: 98   LYFSNNKHLVLKNCYYVPDITRNLIYVALLFKQGYYVHFSPMAVDITLNKALICKGHV-- 271
            L+FS  + L LK+ +  P   RNLI  + L K GY          ++LN  +I  G +  
Sbjct: 338  LFFSTGRFLDLKDTFVAPSFRRNLISGSYLDKSGYSCLTEHGKTTLSLNSVIIGTGTLLE 397

Query: 272  NNDLY---TLKPSDSSLHHTTSNKRMKLYPTNETYLWHLRLGHINLHRIQRLVRDGPLND 442
            N+ LY   T+   D SL+  T   + K    +   LWH RLGHI+  RI+RLV +G L+ 
Sbjct: 398  NHSLYMLDTVDSQDESLNIETRGTKRKFENASSGILWHKRLGHISRDRIERLVSEGILSS 457

Query: 443  IKVESLPVCESCLEGKMTKRSFTSKGLRAKQVLELVHSDVCGPISVQARGGYEYFITFTD 622
            I   +  +C  C++GK TK    S   RA +VLEL+H+D+CGP    +  G +YFI+F D
Sbjct: 458  IDFTNCEICVDCIKGKQTKHK-KSGAYRATEVLELIHTDICGPFPTASWNGQQYFISFID 516

Query: 623  DYSRYGYVYLMTRKSEALEKFKEFRSEAEKQLGKSIKILRSDRGGEYLSN---------- 772
            DYSRY Y++L+  KSE+L+ F++F++E E QL + IK +RSDRGGEY             
Sbjct: 517  DYSRYAYIFLIHEKSESLDVFRKFKAEVENQLERKIKFVRSDRGGEYYGRYDGSGEQRPG 576

Query: 773  DFRTYLSENGILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAV 952
             F  YL E GI+ Q + PG+P  NGVSERRNRTL DMVRSM+  STL  S  G A++TA 
Sbjct: 577  PFAKYLEECGIVPQYTMPGSPSMNGVSERRNRTLKDMVRSMICHSTLPDSLWGEALKTAA 636

Query: 953  YLLNMVLSKFVPKTPLELWNGRKPNLRHIRIWGCPAHV--LKGKMEKMESRLEVCIFIGY 1126
            Y+LN V ++   KTP ELW GRKP+L+H  IWGCPA     +   +K++SR     FIGY
Sbjct: 637  YILNRVPTEATAKTPYELWTGRKPSLKHFHIWGCPAEARPYRPHEKKLDSRTVSSYFIGY 696

Query: 1127 PKGTRGYHFCSPQDKKVFVSTNATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXX 1306
             + +RGY F  P  + +F +  ATF ED           ++ EE  E++ + +  +I   
Sbjct: 697  SERSRGYKFYDPTLRNIFETGTATFFEDNEFRGRNKVRNIIFEE--ESVSAVNPIQI--- 751

Query: 1307 XXXXXXXXXXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQ 1486
                       +V   +  + +    +     +P    D +             E    Q
Sbjct: 752  -----------VVFDKANLEPQNDTGI-----LPTQNDDDI----------GHEEIQNPQ 785

Query: 1487 ELVGXXXXXXXXXXXXXVRRSGRVIRP--PSRYLLYGESFEAVSTEQEEDPTSYKEAMED 1660
            ELV              +RRS R  R   P  Y+++    E   T+ ++DP S++EAM  
Sbjct: 786  ELV--------QQEQVPLRRSTRERRNAIPDDYIVFLMEQEENQTQLKDDPVSFREAMGS 837

Query: 1661 IDVDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARLVA 1840
             + + W   M+ E +SM    V DLV+LP G KPIGCKW++K KR   G V+ YKARLVA
Sbjct: 838  SNSEKWIKGMEEEYQSMLDNKVWDLVELPKGQKPIGCKWIFKTKRDSSGNVQRYKARLVA 897

Query: 1841 KGFTQREGIDYEETFSPVAMLKSIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQ 2020
            KG+TQ+EGIDY+ETFSPV+  +S R ++++ AH+D E+ QMDVKTAFLNG +DE IYM Q
Sbjct: 898  KGYTQKEGIDYKETFSPVSSKESFRTIMALVAHYDLELHQMDVKTAFLNGDIDETIYMEQ 957

Query: 2021 PDGFIQKGQEHRVCKLKKSIFGLKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNK 2200
            P+ F+    +  VCKL KSI+GLKQASR W  KF + + S+GF+ NL E CVY+K   +K
Sbjct: 958  PENFVSHDSKKMVCKLNKSIYGLKQASRQWYHKFHKVIISFGFEVNLVEDCVYQKFSGSK 1017

Query: 2201 VTFLVLYVDDILLIGNDIGMLTSAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALS 2380
            + FLVLYVDDILL  NDI ML   K +L   F+MKDLGEAS+VLGI+I RDR    + LS
Sbjct: 1018 LIFLVLYVDDILLATNDINMLHEIKNFLKDNFEMKDLGEASFVLGIQIIRDRNQGILRLS 1077

Query: 2381 QASYIDNILERFAMQNSKKGQTPFRHG 2461
            Q +YID +L+RF M + K G TP   G
Sbjct: 1078 QKNYIDKVLKRFGMHDCKPGDTPVAKG 1104



 Score =  232 bits (592), Expect(2) = 0.0
 Identities = 110/235 (46%), Positives = 158/235 (67%), Gaps = 1/235 (0%)
 Frame = +3

Query: 2484 CPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKHIL 2663
            CPK   E++ M+K+PYASAVGSLMYA +CTRPDI Y VG++ RY SNPG +HW A K ++
Sbjct: 1112 CPKENLEIQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGVLGRYLSNPGLDHWKAAKRVM 1171

Query: 2664 KYLRRTRGYMLVYSATD-LVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQSC 2840
            +YL+RT+ YML Y  +D L  +GY+DSDF   +D+R STSG VF L GGA+ WRS KQS 
Sbjct: 1172 RYLQRTKDYMLTYQRSDNLEIIGYSDSDFAGCQDSRKSTSGYVFLLAGGAISWRSAKQSL 1231

Query: 2841 IADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNHQ 3020
            +A STM AE+VA  EA+ + +WL+NF+  ++++    + + +YCDN  AV  + + R+  
Sbjct: 1232 VASSTMAAEFVAVFEASNQGLWLKNFVTRLQILEGIERPLKIYCDNKSAVLYSNKNRSTT 1291

Query: 3021 RGKHIERKYHLVRDIVQRGDVLVSKIPSAEKSC*PFTKSLPTRSFEGHIESMGVL 3185
            + K I+ K+ +V++ +Q GD+ +  I +      P TK +P + F  H   MGVL
Sbjct: 1292 KSKFIDIKFLVVQERIQSGDISIEHIGTNSMVADPLTKGIPPKVFHEHTARMGVL 1346


>emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group]
          Length = 1405

 Score =  637 bits (1644), Expect(2) = 0.0
 Identities = 362/846 (42%), Positives = 488/846 (57%), Gaps = 27/846 (3%)
 Frame = +2

Query: 5    FQVTRELNEGEHTLRXXXXXXXXXXXXXXXYLYFSNNKHLVLKNCYYVPDITRNLIYVAL 184
            F+ TR     E T+R                L  +N   L+L++ +YVP + RNLI V+ 
Sbjct: 334  FRSTRTTQRRESTIRVANGVEEKVEAVGDLPLELANGFILLLRDVFYVPSLQRNLISVSK 393

Query: 185  LFKQGYYVHFSPMAVDITLNKALICKGHVNNDLYTLKPSD-----SSLHHTTSNKRMKLY 349
            L   GY   F     ++  N A I    + ++LY L  S+     SSL  T  NK+ K  
Sbjct: 394  LDFDGYDCRFGSGKCELWHNNACIGLAVLRDELYLLSLSENVNVVSSL--TKENKKRKRT 451

Query: 350  PTNETYLWHLRLGHINLHRIQRLVRDGPLNDIKVESLPVCESCLEGKMTKRSFTSKGLRA 529
            P   + LWH RLGHI+  RI+RLV++  L  ++   L  C  C++GK  K S      R+
Sbjct: 452  PDVSSKLWHCRLGHISRGRIERLVKNEILPPLEFSDLEQCIECIKGKFVK-SIKKGAKRS 510

Query: 530  KQVLELVHSDVCGPISVQARGGYEYFITFTDDYSRYGYVYLMTRKSEALEKFKEFRSEAE 709
              +LE++H+D+CGP  V++  GY+ FITFTDDYSRYGY+Y +  +SEAL+KFK F++E E
Sbjct: 511  AGILEIIHTDICGPFPVKSVDGYDSFITFTDDYSRYGYIYPIKERSEALDKFKIFKAEVE 570

Query: 710  KQLGKSIKILRSDRGGEY---------LSNDFRTYLSENGILSQLSAPGTPQQNGVSERR 862
             Q    IK++RSDRGGEY         +   F  +L ENGI++Q S PG PQQNGV+ERR
Sbjct: 571  NQHDIKIKVVRSDRGGEYYGRHTPYGQVPGPFARFLLENGIVAQYSTPGEPQQNGVAERR 630

Query: 863  NRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSKFVPKTPLELWNGRKPNLRHIR 1042
            NRTL+DMVRSM+ +STL       A++TA+++LN V SK VPKTP ELW GR P+L H+R
Sbjct: 631  NRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWTGRVPSLTHLR 690

Query: 1043 IWGCPAH--VLKGKMEKMESRLEVCIFIGYPKGTRGYHFCSPQDKKVFVST-NATFLEDR 1213
            +WG PA   V    + K++ +   C FIGYP+ ++GY F  P     FV T +A FLED 
Sbjct: 691  VWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRFYCPNSYTKFVETRHAVFLEDE 750

Query: 1214 YIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXXLVAGSSGRQTEAPPTVPT 1393
             I       ++ LEE R ++P+ S  E               +         E P  V T
Sbjct: 751  MIRGSSVVREIDLEERRVSVPAPSTQEPFFSLPADVVPAMPVI---------EVPAPVVT 801

Query: 1394 RSPIPEMEGDRVPIVQ--TPLGAKDENEEHREQ------ELVGXXXXXXXXXXXXXVRRS 1549
              P+  M     P++Q  T + A  E E  + Q      +                 RRS
Sbjct: 802  L-PVATMNESEEPVIQDSTEMVATPEEELQQSQIDNVPVQETHQEPQVQDVPNVQAPRRS 860

Query: 1550 GRVIRPPSR--YLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRSAMDSEMKSMYTKS 1723
             RV R   R  Y +Y        +  E+DPTSY+EAM       W  +M  EM+SM    
Sbjct: 861  ERVRRSAIRDDYKVYNIE----ESHMEDDPTSYEEAMRSARSSEWLESMKDEMESMKLND 916

Query: 1724 V*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARLVAKGFTQREGIDYEETFSPVAML 1903
            V DL ++P G K +GCKWVYK K    G +E +KARLVAKGFTQREGIDY ETFSPV+  
Sbjct: 917  VWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARLVAKGFTQREGIDYNETFSPVSCK 976

Query: 1904 KSIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIF 2083
             S RI++++ AH+D E+ QMDVKTAFLNG L+E++YM QP GF+ KG E+  C+LK+SI+
Sbjct: 977  DSFRIIMALVAHYDLELHQMDVKTAFLNGDLEEKVYMAQPKGFVMKGNENMGCRLKRSIY 1036

Query: 2084 GLKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGML 2263
            GLKQASR W +KFD  +K +GF +N+++ C+Y K K+ +  FL+LYVDDILL  +D+ +L
Sbjct: 1037 GLKQASRQWYLKFDGTIKKFGFQENVEDNCIYSKFKNGRFIFLILYVDDILLASSDVSLL 1096

Query: 2264 TSAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQ 2443
               K +L+  FDMKDLGEASYVLGI I RDR    + LSQ +YI+ +L++F M       
Sbjct: 1097 QETKKFLSSNFDMKDLGEASYVLGIEIHRDRTKYALGLSQKTYIEKVLKKFNMYRCSATP 1156

Query: 2444 TPFRHG 2461
             P   G
Sbjct: 1157 APIMKG 1162



 Score =  205 bits (521), Expect(2) = 0.0
 Identities = 104/234 (44%), Positives = 146/234 (62%), Gaps = 1/234 (0%)
 Frame = +3

Query: 2484 CPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKHIL 2663
            CP+   E+  MK  PYASAVGSL YA +CTRPD+ +  G++ R+QSNPG EHW  VK +L
Sbjct: 1170 CPRNQFELNEMKTKPYASAVGSLQYAQVCTRPDLAFVTGLLGRFQSNPGLEHWKLVKKVL 1229

Query: 2664 KYLRRTRGYMLVYSATD-LVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQSC 2840
            +YL+ T+G ML Y  ++ L  VGY+DSDF   +D   STSG VFTL GGA+ W+S KQ+ 
Sbjct: 1230 RYLQGTKGLMLSYRRSESLQIVGYSDSDFA--KDNTKSTSGYVFTLAGGAISWKSSKQTI 1287

Query: 2841 IADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNHQ 3020
             A STM AE++A  EA  +  WL+ F+  +++V    + + LYCDN  AV  A   ++  
Sbjct: 1288 TAGSTMYAEFIACYEATGQVNWLKKFIPGLKVVDSIEKPLKLYCDNEPAVMYAHNNQSSG 1347

Query: 3021 RGKHIERKYHLVRDIVQRGDVLVSKIPSAEKSC*PFTKSLPTRSFEGHIESMGV 3182
              KHI+ KY++V+D V+   + +  I +      P TK LP   F+ H+  MG+
Sbjct: 1348 AAKHIDIKYYVVKDKVRDQTISLEHIKTERMLADPLTKGLPPNVFKEHVAGMGL 1401


>gb|AAT69633.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1358

 Score =  637 bits (1644), Expect(2) = 0.0
 Identities = 357/815 (43%), Positives = 481/815 (59%), Gaps = 27/815 (3%)
 Frame = +2

Query: 98   LYFSNNKHLVLKNCYYVPDITRNLIYVALLFKQGYYVHFSPMAVDITLNKALICKGHVNN 277
            L  +N   L+L++ +YVP + RNLI V+ L   GY   F     ++  N A I    + +
Sbjct: 318  LELANGFILLLRDVFYVPSLQRNLISVSKLDFDGYDCRFGSGKCELWHNNACIGLAVLRD 377

Query: 278  DLYTLKPSD-----SSLHHTTSNKRMKLYPTNETYLWHLRLGHINLHRIQRLVRDGPLND 442
            +LY L  S+     SSL  T  NK+ K  P   + LWH RLGHI+  RI+RLV++  L  
Sbjct: 378  ELYLLSLSENVNVVSSL--TKENKKRKRTPDVSSKLWHCRLGHISRGRIERLVKNEILPP 435

Query: 443  IKVESLPVCESCLEGKMTKRSFTSKGLRAKQVLELVHSDVCGPISVQARGGYEYFITFTD 622
            ++   L  C  C++GK  K S      R+  +LE++H+D+CGP  V++  GY+ FITFTD
Sbjct: 436  LEFSDLEQCIECIKGKFVK-SIKKGAKRSAGILEIIHTDICGPFPVKSVDGYDSFITFTD 494

Query: 623  DYSRYGYVYLMTRKSEALEKFKEFRSEAEKQLGKSIKILRSDRGGEY---------LSND 775
            DYSRYGY+Y +  +SEAL+KFK F++E E Q    IK++RSDRGGEY         +   
Sbjct: 495  DYSRYGYIYPIKERSEALDKFKIFKAEVENQHDIKIKVVRSDRGGEYYGRHTPYGQVPGP 554

Query: 776  FRTYLSENGILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVY 955
            F  +L ENGI++Q S PG PQQNGV+ERRNRTL+DMVRSM+ +STL       A++TA++
Sbjct: 555  FARFLLENGIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTAIH 614

Query: 956  LLNMVLSKFVPKTPLELWNGRKPNLRHIRIWGCPAH--VLKGKMEKMESRLEVCIFIGYP 1129
            +LN V SK VPKTP ELW GR P+L H+R+WG PA   V    + K++ +   C FIGYP
Sbjct: 615  ILNRVPSKSVPKTPYELWTGRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYP 674

Query: 1130 KGTRGYHFCSPQDKKVFVST-NATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXX 1306
            + ++GY F  P     FV T +A FLED  I       ++ LEE R ++P+ S  E    
Sbjct: 675  ERSKGYRFYCPNSYTKFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVPAPSTQE---- 730

Query: 1307 XXXXXXXXXXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQ--TPLGAKDENEEHR 1480
                       +V      +  AP   P   P+  M     P++Q  T + A  E E  +
Sbjct: 731  ---PFFSLPADVVPAMPVIEVPAPVVTP---PVATMNESEEPVIQDSTEMVATPEEELQQ 784

Query: 1481 EQ------ELVGXXXXXXXXXXXXXVRRSGRVIRPPSR--YLLYGESFEAVSTEQEEDPT 1636
             Q      +                 RRS RV R   R  Y +Y        +  E+DPT
Sbjct: 785  PQIDNVPVQETHQEPQVQDVPNVQAPRRSERVRRSAIRDDYKVYNIE----ESHMEDDPT 840

Query: 1637 SYKEAMEDIDVDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVE 1816
            SY+EAM       W  AM  EM+SM    V DL ++P G K +GCKWVYK K    G +E
Sbjct: 841  SYEEAMRSARSSEWLEAMKDEMESMKLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIE 900

Query: 1817 TYKARLVAKGFTQREGIDYEETFSPVAMLKSIRILLSIAAHFDYEVWQMDVKTAFLNGSL 1996
             +KARLVAKGFTQREGIDY ETFSPV+   S RI++++ AH+D E+ QMDVKTAFLNG L
Sbjct: 901  KFKARLVAKGFTQREGIDYNETFSPVSCKDSFRIIMALVAHYDLELHQMDVKTAFLNGDL 960

Query: 1997 DERIYMMQPDGFIQKGQEHRVCKLKKSIFGLKQASRSWNIKFDQAVKSYGFDQNLDEPCV 2176
            +E++YM QP GF+ KG E+  C+LK+SI+GLKQASR W +KFD  +K +GF +N+++ C+
Sbjct: 961  EEKVYMAQPKGFVMKGNENMGCRLKRSIYGLKQASRQWYLKFDGTIKKFGFQENVEDNCI 1020

Query: 2177 YKKIKDNKVTFLVLYVDDILLIGNDIGMLTSAKCWLAQQFDMKDLGEASYVLGIRIFRDR 2356
            Y K K+ +  FL+LYVDDILL  +D+ +L   K +L+  FDMKDLGEASYVLGI I RDR
Sbjct: 1021 YSKFKNGRFIFLILYVDDILLASSDVSLLQETKKFLSSNFDMKDLGEASYVLGIEIHRDR 1080

Query: 2357 KNKRIALSQASYIDNILERFAMQNSKKGQTPFRHG 2461
                + LSQ +YI+ +L++F M        P   G
Sbjct: 1081 TKYALGLSQKTYIEKVLKKFNMYRCSATPAPIMKG 1115



 Score =  205 bits (521), Expect(2) = 0.0
 Identities = 104/234 (44%), Positives = 146/234 (62%), Gaps = 1/234 (0%)
 Frame = +3

Query: 2484 CPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKHIL 2663
            CP+   E+  MK  PYASAVGSL YA +CTRPD+ +  G++ R+QSNPG EHW  VK +L
Sbjct: 1123 CPRNQFELNEMKTKPYASAVGSLQYAQVCTRPDLAFVTGLLGRFQSNPGLEHWKLVKKVL 1182

Query: 2664 KYLRRTRGYMLVYSATD-LVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQSC 2840
            +YL+ T+G ML Y  ++ L  VGY+DSDF   +D   STSG VFTL GGA+ W+S KQ+ 
Sbjct: 1183 RYLQGTKGLMLSYRRSESLQIVGYSDSDFA--KDNTKSTSGYVFTLAGGAISWKSSKQTI 1240

Query: 2841 IADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNHQ 3020
             A STM AE++A  EA  +  WL+ F+  +++V    + + LYCDN  AV  A   ++  
Sbjct: 1241 TAGSTMYAEFIACYEATGQVNWLKKFIPGLKVVDSIEKPLKLYCDNEPAVMYAHNNQSSG 1300

Query: 3021 RGKHIERKYHLVRDIVQRGDVLVSKIPSAEKSC*PFTKSLPTRSFEGHIESMGV 3182
              KHI+ KY++V+D V+   + +  I +      P TK LP   F+ H+  MG+
Sbjct: 1301 AAKHIDIKYYVVKDKVRDQTISLEHIKTERMLADPLTKGLPPNVFKEHVAGMGL 1354


>gb|ABF96044.1| transposon protein, putative, unclassified [Oryza sativa Japonica
            Group]
          Length = 1395

 Score =  636 bits (1640), Expect(2) = 0.0
 Identities = 363/846 (42%), Positives = 488/846 (57%), Gaps = 27/846 (3%)
 Frame = +2

Query: 5    FQVTRELNEGEHTLRXXXXXXXXXXXXXXXYLYFSNNKHLVLKNCYYVPDITRNLIYVAL 184
            F+ TR     E T+R                L  +N   L+L++ +YVP + RNLI V+ 
Sbjct: 330  FRSTRTTQRRESTIRVANGVEEKVEAVGDLPLELANGFILLLRDVFYVPSLQRNLISVSK 389

Query: 185  LFKQGYYVHFSPMAVDITLNKALICKGHVNNDLYTLKPSD-----SSLHHTTSNKRMKLY 349
            L   GY   F     ++  N A I    + ++LY L  S+     SSL  T  NK+ K  
Sbjct: 390  LDFDGYDCRFGSGKCELWHNNACIGLAVLRDELYLLSLSENVNVVSSL--TKENKKRKRT 447

Query: 350  PTNETYLWHLRLGHINLHRIQRLVRDGPLNDIKVESLPVCESCLEGKMTKRSFTSKGLRA 529
            P   + LWH RLGHI+  RI+RLV++  L  ++      C  C++GK  K S      R+
Sbjct: 448  PDVSSKLWHCRLGHISRGRIERLVKNEILPPLE------CIECIKGKFVK-SIKKGAKRS 500

Query: 530  KQVLELVHSDVCGPISVQARGGYEYFITFTDDYSRYGYVYLMTRKSEALEKFKEFRSEAE 709
              +LE++H+D+CGP  V++  GY+ FITFTDDYSRYGY+Y +  +SEAL+KFK F++E E
Sbjct: 501  AGILEIIHTDICGPFPVKSVDGYDSFITFTDDYSRYGYIYPIKERSEALDKFKIFKAEVE 560

Query: 710  KQLGKSIKILRSDRGGEY---------LSNDFRTYLSENGILSQLSAPGTPQQNGVSERR 862
             Q    IK++RSDRGGEY         +   F  +L ENGI++Q S PG PQQNGV+ERR
Sbjct: 561  NQHDIKIKVVRSDRGGEYYGRHTPYGQVPGPFARFLLENGIVAQYSTPGEPQQNGVAERR 620

Query: 863  NRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSKFVPKTPLELWNGRKPNLRHIR 1042
            NRTL+DMVRSM+ +STL       A++TA+++LN V SK VPKTP ELW GR P+L H+R
Sbjct: 621  NRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWTGRVPSLTHLR 680

Query: 1043 IWGCPAH--VLKGKMEKMESRLEVCIFIGYPKGTRGYHFCSPQDKKVFVST-NATFLEDR 1213
            +WG PA   V    + K++ +   C FIGYP+ ++GY F  P     FV T +A FLED 
Sbjct: 681  VWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRFYCPNSYTKFVETRHAVFLEDE 740

Query: 1214 YIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXXLVAGSSGRQTEAPPTVPT 1393
             I       ++ LEE R ++P+ S  E               +V      +  AP   P 
Sbjct: 741  MIRGSSVVREIDLEERRVSVPAPSTQE-------PFFSLPADVVPAMPVIEVPAPVVTP- 792

Query: 1394 RSPIPEMEGDRVPIVQ--TPLGAKDENEEHREQ------ELVGXXXXXXXXXXXXXVRRS 1549
              P+  M     P++Q  T + A  E E  + Q      +                 RRS
Sbjct: 793  --PVATMNESEEPVIQDSTEMVATPEEELQQPQIDNVPVQETHQEPQVQDVPNVQAPRRS 850

Query: 1550 GRVIRPPSR--YLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRSAMDSEMKSMYTKS 1723
             RV R   R  Y +Y        +  E+DPTSY+EAM       W  AM  EMKSM    
Sbjct: 851  ERVRRSAIRDDYKVYNIE----ESHMEDDPTSYEEAMRSARSSEWLEAMKDEMKSMKLND 906

Query: 1724 V*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARLVAKGFTQREGIDYEETFSPVAML 1903
            V DL ++P G K +GCKWVYK K    G +E +KARLVAKGFTQREGIDY ETFSPV+  
Sbjct: 907  VWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARLVAKGFTQREGIDYNETFSPVSCK 966

Query: 1904 KSIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIF 2083
             S RI++++ AH+D E+ QMDVKTAFLNG L+E++YM QP GF+ KG E+  C+LK+SI+
Sbjct: 967  DSFRIIMALVAHYDLELHQMDVKTAFLNGDLEEKVYMAQPKGFVMKGNENMGCRLKRSIY 1026

Query: 2084 GLKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGML 2263
            GLKQASR W +KFD  +K +GF +N+++ C+Y K K+ +  FL+LYVDDILL  +D+ +L
Sbjct: 1027 GLKQASRQWYLKFDGTIKKFGFQENVEDNCIYSKFKNGRFIFLILYVDDILLASSDVSLL 1086

Query: 2264 TSAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQ 2443
               K +L+  FDMKDLGEASYVLGI I RDR    + LSQ +YI+ +L++F M       
Sbjct: 1087 QETKKFLSSNFDMKDLGEASYVLGIEIHRDRTKYALGLSQKTYIEKVLKKFNMYRCSATP 1146

Query: 2444 TPFRHG 2461
             P   G
Sbjct: 1147 APIMKG 1152



 Score =  203 bits (517), Expect(2) = 0.0
 Identities = 103/234 (44%), Positives = 145/234 (61%), Gaps = 1/234 (0%)
 Frame = +3

Query: 2484 CPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKHIL 2663
            CP+   E+  MK  PYASAVGSL YA +CTRPD+ +  G++ R+QSNPG EHW  VK +L
Sbjct: 1160 CPRNQYELNEMKTKPYASAVGSLQYAQVCTRPDLAFVTGLLGRFQSNPGLEHWKLVKKVL 1219

Query: 2664 KYLRRTRGYMLVYSATD-LVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQSC 2840
            +YL+ T+G ML Y  ++ L  VGY+DSDF   +D   STSG VFTL GGA+ W+S KQ+ 
Sbjct: 1220 RYLQGTKGLMLSYRRSESLQIVGYSDSDFA--KDNTKSTSGYVFTLAGGAISWKSSKQTI 1277

Query: 2841 IADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNHQ 3020
             A STM AE++A  EA  +  WL+ F+  +++V    + + LYCDN  AV      ++  
Sbjct: 1278 TAGSTMYAEFIACYEATGQVNWLKKFIPGLKVVDSIEKPLKLYCDNEPAVMYTHNNQSSG 1337

Query: 3021 RGKHIERKYHLVRDIVQRGDVLVSKIPSAEKSC*PFTKSLPTRSFEGHIESMGV 3182
              KHI+ KY++V+D V+   + +  I +      P TK LP   F+ H+  MG+
Sbjct: 1338 AAKHIDIKYYVVKDKVRDQTISLEHIKTERMLADPLTKGLPPNVFKEHVAGMGL 1391


>gb|ABF94883.1| transposon protein, putative, unclassified [Oryza sativa Japonica
            Group]
          Length = 1390

 Score =  635 bits (1639), Expect(2) = 0.0
 Identities = 353/807 (43%), Positives = 477/807 (59%), Gaps = 19/807 (2%)
 Frame = +2

Query: 98   LYFSNNKHLVLKNCYYVPDITRNLIYVALLFKQGYYVHFSPMAVDITLNKALICKGHVNN 277
            L  +N   L+L++ +YVP + RNLI V+ L   GY   F     ++  N A I    + +
Sbjct: 360  LELANGFILLLRDVFYVPSLQRNLISVSKLDFDGYDCRFGSGKCELWHNNACIGLAVLRD 419

Query: 278  DLYTLKPSD-----SSLHHTTSNKRMKLYPTNETYLWHLRLGHINLHRIQRLVRDGPLND 442
            +LY L  S+     SSL  T  NK+ K  P   + LWH RLGHI+  RI+RLV++  L  
Sbjct: 420  ELYLLSLSENVNVVSSL--TKENKKRKRTPDVSSKLWHYRLGHISRGRIERLVKNEILPP 477

Query: 443  IKVESLPVCESCLEGKMTKRSFTSKGLRAKQVLELVHSDVCGPISVQARGGYEYFITFTD 622
            ++   L  C  C++GK  K S      R+  +LE++H+D+CGP  V++  GY+ FITFTD
Sbjct: 478  LEFSDLEQCIECIKGKFVK-SIKKGAKRSAGILEIIHTDICGPFPVKSVDGYDSFITFTD 536

Query: 623  DYSRYGYVYLMTRKSEALEKFKEFRSEAEKQLGKSIKILRSDRGGEY---------LSND 775
            DYSRYGY+Y +  +SEA++KFK F++E E QL   IK++RSDRGGEY         +   
Sbjct: 537  DYSRYGYIYPIKERSEAMDKFKIFKAEVENQLDIKIKVVRSDRGGEYYGRHTPYGQVPGP 596

Query: 776  FRTYLSENGILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVY 955
            F  +L ENGI++Q S PG PQQNGV+ERRNRTL+DMVRSM+ +STL       A++TA++
Sbjct: 597  FARFLLENGIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTAIH 656

Query: 956  LLNMVLSKFVPKTPLELWNGRKPNLRHIRIWGCPAH--VLKGKMEKMESRLEVCIFIGYP 1129
            +LN V SK VPKTP ELW GR P+L H+R+WG PA   V    + K++ +   C FIGYP
Sbjct: 657  ILNRVPSKSVPKTPYELWTGRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYP 716

Query: 1130 KGTRGYHFCSPQDKKVFVST-NATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXX 1306
            + ++GY F  P     FV T +A FLED  I       ++ LEE R ++P+ S  E    
Sbjct: 717  ERSKGYRFYCPNSYTKFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVPAPSTQEPFFS 776

Query: 1307 XXXXXXXXXXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQ 1486
                       +    +  +             PE E  +  I   P+      E H+E 
Sbjct: 777  LPADVVPAMPVIEVPMNESEEPVIQDSTEMVATPEEELQQPQIDNVPV-----QETHQEP 831

Query: 1487 ELVGXXXXXXXXXXXXXVRRSGRVIRPPSR--YLLYGESFEAVSTEQEEDPTSYKEAMED 1660
            ++                RRS RV R   R  Y +Y        +  E+DPTSY+EAM  
Sbjct: 832  QVQDVPNVQAP-------RRSERVRRSAIRDDYKVYNIE----ESHMEDDPTSYEEAMRS 880

Query: 1661 IDVDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARLVA 1840
                 W  AM  EMKSM    V DL ++P G K +GCKWVYK K    G +E +KARLVA
Sbjct: 881  ARSSEWLEAMKDEMKSMKLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARLVA 940

Query: 1841 KGFTQREGIDYEETFSPVAMLKSIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQ 2020
            KGFTQREGIDY ETFSPV+   S RI++++ AH+D E+ QMDVKTAFLNG L+E++YM Q
Sbjct: 941  KGFTQREGIDYNETFSPVSCKDSFRIIMALVAHYDLELHQMDVKTAFLNGDLEEKVYMAQ 1000

Query: 2021 PDGFIQKGQEHRVCKLKKSIFGLKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNK 2200
            P GF+ KG E+  C+LK+SI+GLKQASR W +KFD  +K +GF +N+++ C+Y K K+ +
Sbjct: 1001 PKGFVMKGNENMGCRLKRSIYGLKQASRQWYLKFDGTIKKFGFKENVEDNCIYSKFKNGR 1060

Query: 2201 VTFLVLYVDDILLIGNDIGMLTSAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALS 2380
              FL+LYVDDILL  +D+ +L   K +L+  FDMKDLGEASYVLGI I RDR    + LS
Sbjct: 1061 FIFLILYVDDILLASSDVSLLQETKKFLSSNFDMKDLGEASYVLGIEIHRDRTKYALGLS 1120

Query: 2381 QASYIDNILERFAMQNSKKGQTPFRHG 2461
            Q +YI+ +L++F M        P   G
Sbjct: 1121 QKTYIEKVLKKFNMYRCSATPAPIMKG 1147



 Score =  202 bits (513), Expect(2) = 0.0
 Identities = 103/234 (44%), Positives = 145/234 (61%), Gaps = 1/234 (0%)
 Frame = +3

Query: 2484 CPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKHIL 2663
            CP+   E+  MK  PYASAVGSL YA +CTRPD+ +  G++ R+QSNPG EHW  VK +L
Sbjct: 1155 CPRNQYELNEMKTKPYASAVGSLQYAQVCTRPDLAFVTGLLGRFQSNPGLEHWKLVKKVL 1214

Query: 2664 KYLRRTRGYMLVYSATD-LVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQSC 2840
            +YL+ T+G ML Y  ++ L  VGY+DSDF   +D   STSG VFTL GGA+ W+S KQ+ 
Sbjct: 1215 RYLQGTKGLMLSYRRSESLQIVGYSDSDFA--KDNTKSTSGYVFTLAGGAISWKSSKQTI 1272

Query: 2841 IADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNHQ 3020
             A STM AE++A  EA  +  WL+ F+  +++V    + + LYCDN  AV  A   ++  
Sbjct: 1273 TAGSTMYAEFIACYEATGQVNWLKKFIPGLKVVDSIEKPLKLYCDNEPAVMYAHNNQSSG 1332

Query: 3021 RGKHIERKYHLVRDIVQRGDVLVSKIPSAEKSC*PFTKSLPTRSFEGHIESMGV 3182
              KHI+ KY++V+D V+   + +  I +        TK LP   F+ H+  MG+
Sbjct: 1333 AAKHIDIKYYVVKDKVRDQTISLEHIKTERMLADALTKGLPPNVFKEHVAGMGL 1386


>gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1407

 Score =  623 bits (1606), Expect(2) = 0.0
 Identities = 361/850 (42%), Positives = 487/850 (57%), Gaps = 30/850 (3%)
 Frame = +2

Query: 2    GFQVTRELNEGEHTLRXXXXXXXXXXXXXXXYLYFSNNKHLVLKNCYYVPDITRNLIYVA 181
            GF + R L  GE  +R                L       L L +  YVP + RNL+ V+
Sbjct: 337  GFAMRRTLKRGERRIRVANGVETEVEAIGDFTLTLHTGFKLQLHDVLYVPSMKRNLVSVS 396

Query: 182  LLFKQGYYVHFSPMAVDITLNKALICKGHVNNDLYTLKPSDSSLHHTTSNKR----MKLY 349
             L   GYY  F      I  +   +        LY +   D++ +  +S+       + +
Sbjct: 397  RLDNDGYYCTFGNNRCIIMHDNKEVGLAVGWEQLYQISVCDATYNVDSSSNANISTKQKH 456

Query: 350  PTNETY--LWHLRLGHINLHRIQRLVRDGPLNDIKVESLPV--CESCLEGKMTKRSFTSK 517
              NET   LWH RLGHI+  RI+RL+++  L  +      +  C  C++GK +K+    K
Sbjct: 457  NDNETSSKLWHYRLGHISRGRIERLIKENILYPLDFSDADIDHCIDCIKGKYSKQ--IKK 514

Query: 518  GL-RAKQVLELVHSDVCGPISVQARGGYEYFITFTDDYSRYGYVYLMTRKSEALEKFKEF 694
            G  R+  +LE++H+D+CGP + ++  G++ FITFTDDYSRYGY+Y +  +SEAL+KFK F
Sbjct: 515  GANRSMGILEIIHTDICGPFNEKSVDGFDSFITFTDDYSRYGYIYPIKERSEALDKFKIF 574

Query: 695  RSEAEKQLGKSIKILRSDRGGEY---------LSNDFRTYLSENGILSQLSAPGTPQQNG 847
            ++E E Q  + IKI+RSDRGGEY         +   F  +L E+GI +Q SAPG PQQNG
Sbjct: 575  KAEVENQHDRKIKIVRSDRGGEYYGRHTTYGQIPGPFARFLQESGIKAQYSAPGEPQQNG 634

Query: 848  VSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSKFVPKTPLELWNGRKPN 1027
            V+ERRNRTL+DMVRSML  STL       A++TA ++LN + SK VPKTP ELW G+KP 
Sbjct: 635  VAERRNRTLMDMVRSMLSHSTLPVKLWMEALKTATHILNRIPSKSVPKTPFELWTGKKPT 694

Query: 1028 LRHIRIWGCPAH--VLKGKMEKMESRLEVCIFIGYPKGTRGYHFCSPQDKKVFVST-NAT 1198
            L +  +WGCPA   V    M K++ +   C FIGYP  ++ Y F  P     F+ T +A 
Sbjct: 695  LNYFHVWGCPAEARVFNPNMGKLDLKTISCHFIGYPDKSKAYRFYCPNQFTKFIETRHAV 754

Query: 1199 FLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXXLVAGSSGRQTEAP 1378
            FLE+  I+   +  +V+LEE R  +P   +P I+             +   +     EAP
Sbjct: 755  FLENDIIKGSMTPREVVLEEKRNYVP---MPIIKEPVFSTHTHVTPSIERHNDATPAEAP 811

Query: 1379 PTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQELVGXXXXXXXXXXXXXVRRSGRV 1558
             T  T S I                + DEN E  +Q  +              VRRS RV
Sbjct: 812  AT--TSSSI----------------SNDENNEDAQQPQI-----VIDEQNNEPVRRSQRV 848

Query: 1559 IRP--PSRYLLY--GESFEAVSTEQEE-----DPTSYKEAMEDIDVDHWRSAMDSEMKSM 1711
             +   PS Y+ Y   E  E +S E  E     DP S+KEAM+      W  AM  EMKSM
Sbjct: 849  RKSAIPSDYITYMNEEVNEPMSEEVNEPILDNDPISFKEAMKGEHSSEWLKAMKDEMKSM 908

Query: 1712 YTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARLVAKGFTQREGIDYEETFSP 1891
             T  V DLV++P G K +GCKWVYK KR   G ++ +K RLVAKGFTQREGIDY ETFSP
Sbjct: 909  STNKVWDLVEIPEGAKTVGCKWVYKTKRDPKGNIKRFKVRLVAKGFTQREGIDYNETFSP 968

Query: 1892 VAMLKSIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLK 2071
            V+   S RI++++ AH+D E+ QMDVKTAFLNG L E +YM QP+GF+ KG+EH  C LK
Sbjct: 969  VSTKDSFRIIMALVAHYDLELHQMDVKTAFLNGDLYEDVYMAQPEGFVMKGKEHMGCYLK 1028

Query: 2072 KSIFGLKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGND 2251
            KSI+GLKQASR W +KFDQ ++ +GF +N  + C+Y K K++K  FL+LYVDDILL  N+
Sbjct: 1029 KSIYGLKQASRQWYLKFDQIIRQFGFKENKKDDCIYAKFKESKFIFLILYVDDILLASNN 1088

Query: 2252 IGMLTSAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNS 2431
              ML   K +LA +F+MKDLGEA+YVLGI I+RDR N  + LSQ +YI+ +L+++ M N 
Sbjct: 1089 RNMLLETKKFLASKFEMKDLGEATYVLGIEIYRDRSNGVLGLSQKAYIEKVLKKYNMHNC 1148

Query: 2432 KKGQTPFRHG 2461
                 P   G
Sbjct: 1149 SASPAPIMKG 1158



 Score =  211 bits (538), Expect(2) = 0.0
 Identities = 105/241 (43%), Positives = 149/241 (61%), Gaps = 1/241 (0%)
 Frame = +3

Query: 2484 CPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKHIL 2663
            CPK   E   MK +PYASAVGS+MYA +CTRPD+ +  G++ RYQSNP  EHW   K  L
Sbjct: 1166 CPKNEYEAAQMKSIPYASAVGSIMYAQVCTRPDLAFVTGMLGRYQSNPSLEHWKLAKKTL 1225

Query: 2664 KYLRRTRGYMLVYSATD-LVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQSC 2840
            +YL+ T+  ML Y  ++ L  +GY+DSD     D + STSG +FTL  GAV W+S KQ  
Sbjct: 1226 RYLQGTKDLMLTYRKSENLEVIGYSDSDLAGCVDDKKSTSGYIFTLARGAVSWKSSKQKV 1285

Query: 2841 IADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNHQ 3020
             A STM+AEYVA  EA  +A+WL+NF+  + +V   S+ + LYCDN  AV  A   ++  
Sbjct: 1286 TASSTMQAEYVACYEATGQAIWLKNFIPGLRVVDSISKPLKLYCDNKPAVYYASSNKSSA 1345

Query: 3021 RGKHIERKYHLVRDIVQRGDVLVSKIPSAEKSC*PFTKSLPTRSFEGHIESMGVLDMSHL 3200
              K+I+ KYH+V++++Q   + V  + +      P TK LP   F+ H+  MG+++   +
Sbjct: 1346 SAKYIDIKYHVVKEMIQDQTISVEYMNTKLMLADPLTKDLPPAVFKEHVAGMGLVEKPLI 1405

Query: 3201 L 3203
            L
Sbjct: 1406 L 1406


>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
          Length = 1321

 Score =  603 bits (1556), Expect(2) = 0.0
 Identities = 354/820 (43%), Positives = 483/820 (58%), Gaps = 23/820 (2%)
 Frame = +2

Query: 98   LYFSNNKHLVLKNCYYVPDITRNLIYVALLFKQGYYVHFSPMAVDITLNKALICKGHVNN 277
            L  S+   L L+  +YVP  +RNLI ++ L   GY  +F   + ++  N   +  G +++
Sbjct: 300  LTLSSGFILKLERTFYVPSFSRNLISISRLVPFGYSFNFKDTSFELFYNSECVGNGILSD 359

Query: 278  DLYTL----KPSDSSLHHTTSNKRMKLYPTNETYLWHLRLGHINLHRIQRLVRDGPLNDI 445
             LY L      + SS+H  T  KR  +   N + LWH RLGHI++ RI+RLV+DG LN +
Sbjct: 360  GLYLLGLQNNATYSSMHVQTGIKRCNINE-NSSMLWHRRLGHISIERIKRLVKDGVLNTL 418

Query: 446  KVESLPVCESCLEGKMTKRSFTSKGL-RAKQVLELVHSDVCGPISVQARGGYEYFITFTD 622
                   C  C++GK T  S   KG  R+  +LE++H+D+C P  + A G  +YFITF D
Sbjct: 419  DFADFKTCMDCIKGKQTNMS--KKGANRSSSILEIIHTDICCP-DMDAHG-QKYFITFID 474

Query: 623  DYSRYGYVYLMTRKSEALEKFKEFRSEAEKQLGKSIKILRSDRGGEYLSN---------D 775
            DYSRY  VYL+  K EAL+ FK F++E E Q GK IKI+RSDRGGEY             
Sbjct: 475  DYSRYMNVYLLHNKYEALDAFKVFKAEVENQCGKQIKIVRSDRGGEYYGRYTENGQAPGP 534

Query: 776  FRTYLSENGILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVY 955
            F  +L E+GI++Q + PG+P QNGV+ERRNRTLLDMVRSML  S L  S    A++TA Y
Sbjct: 535  FAKFLQEHGIVAQYTMPGSPNQNGVAERRNRTLLDMVRSMLSNSNLPKSLWAEALKTAAY 594

Query: 956  LLNMVLSKFVPKTPLELWNGRKPNLRHIRIWGCPAHV--LKGKMEKMESRLEVCIFIGYP 1129
            +LN V +K VPKTP EL+ G KP+L+H+R+WGCP+ V     + +K++ R     FIGY 
Sbjct: 595  ILNRVPTKAVPKTPFELFKGWKPSLKHMRVWGCPSEVRIYNPQEKKLDPRTISGYFIGYA 654

Query: 1130 KGTRGYHFCSPQD-KKVFVSTNATFLEDRYIEECESKSKVLLE-EMRENLPSSSIPEIRX 1303
            + ++GY F  P    ++  S NA F+E+  I   +    +  E +  E+ PS+S   +  
Sbjct: 655  ERSKGYRFYCPHHITRIVESRNAKFIENDLISGSDQLRDLGSEIDYIESQPSTSNERLVV 714

Query: 1304 XXXXXXXXXXXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDR-VPIVQTPLGAKDEN--EE 1474
                         + G                 IP+   D  V  V   +   DE   E+
Sbjct: 715  IHTPQVQRDDEQHMIG-----------------IPQTVVDNLVDQVDHQIHENDEQPVEQ 757

Query: 1475 HREQELVGXXXXXXXXXXXXXVRRSGRVIRP--PSRYLLYGESFEAVSTEQEEDPTSYKE 1648
            H  QE V              +RRS RV +   PS Y++Y +  +  +   E DP ++ +
Sbjct: 758  HDPQENVDAT-----------LRRSTRVRKSAIPSDYIVYLQESD-YNIGAENDPETFDQ 805

Query: 1649 AMEDIDVDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKA 1828
            AM   + + W  AM  EM SM +  V +LV+LPNG K IGCKWV+K K+   G +E YKA
Sbjct: 806  AMSCKESNLWYDAMKDEMSSMQSNKVWNLVELPNGAKAIGCKWVFKTKKDSLGNIERYKA 865

Query: 1829 RLVAKGFTQREGIDYEETFSPVAMLKSIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERI 2008
            RLVAKGFTQ+EGIDY+ETFSPV+   S+RI+L++ AHFD E+ QMDVKTAFLNG L+E +
Sbjct: 866  RLVAKGFTQKEGIDYKETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGDLEEEV 925

Query: 2009 YMMQPDGFIQKGQEHRVCKLKKSIFGLKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKI 2188
            YM QP+GF     EH VCKL KSI+GLKQASR W +KF   + S+GFD+N  + C+Y K+
Sbjct: 926  YMKQPEGFSSNSGEHLVCKLNKSIYGLKQASRQWYLKFHGIISSFGFDENPMDQCIYHKV 985

Query: 2189 KDNKVTFLVLYVDDILLIGNDIGMLTSAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKR 2368
              +K+ FLVLYVDDILL  ND G+L   K +L++ FDMKD+G+ASYV+GI+I RDR    
Sbjct: 986  SGSKICFLVLYVDDILLAANDRGLLHEVKQFLSKNFDMKDMGDASYVIGIKIHRDRSRGI 1045

Query: 2369 IALSQASYIDNILERFAMQNSKKGQTPFRHGIHLSRGALP 2488
            + LSQ +YI+ ILERF M++      P   G   +    P
Sbjct: 1046 LGLSQETYINKILERFRMKDCSPSVAPIVKGDRFNLNQCP 1085



 Score =  230 bits (586), Expect(2) = 0.0
 Identities = 111/234 (47%), Positives = 156/234 (66%), Gaps = 1/234 (0%)
 Frame = +3

Query: 2484 CPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKHIL 2663
            CPK   E E MK +PYAS VGSLMYA +CTRPDI +AVG++ RYQSNPG +HW A K +L
Sbjct: 1084 CPKNDFEREQMKNIPYASVVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGIDHWRAAKKVL 1143

Query: 2664 KYLRRTRGYMLVYSATD-LVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQSC 2840
            +YL+ T+ YML+Y  TD L  +GY+DSDF    D+R STSG +F + GGA+ W S+KQS 
Sbjct: 1144 RYLQGTKDYMLMYRQTDNLDAIGYSDSDFAGCVDSRRSTSGYIFMMAGGAISWGSVKQSL 1203

Query: 2841 IADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNHQ 3020
             A STMEAE+V+  EA    VWL++F+  ++++   S+ + ++CDNS AV  A+  ++  
Sbjct: 1204 AATSTMEAEFVSCFEATSHGVWLKSFISGLKIIDTISRPLRIFCDNSAAVFMAKNNKSGS 1263

Query: 3021 RGKHIERKYHLVRDIVQRGDVLVSKIPSAEKSC*PFTKSLPTRSFEGHIESMGV 3182
            R KHI+ KY  +R+ V+   V++  I +      P TK +P   F+ H+E MG+
Sbjct: 1264 RSKHIDIKYLAIRERVKDKKVVIEHISTELMIADPLTKGMPPFKFKDHVERMGL 1317


>emb|CAE03910.2| OSJNBb0015G09.4 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  625 bits (1613), Expect(2) = 0.0
 Identities = 360/846 (42%), Positives = 482/846 (56%), Gaps = 27/846 (3%)
 Frame = +2

Query: 5    FQVTRELNEGEHTLRXXXXXXXXXXXXXXXYLYFSNNKHLVLKNCYYVPDITRNLIYVAL 184
            F+ TR     E T+R                L  +N   L+L++ +YVP + RNLI V+ 
Sbjct: 334  FRSTRTTQRRESTIRVANGVEEKVEAVGDLPLELANGFILLLRDVFYVPSLQRNLISVSK 393

Query: 185  LFKQGYYVHFSPMAVDITLNKALICKGHVNNDLYTLKPSD-----SSLHHTTSNKRMKLY 349
            L   GY   F     ++  N A I    + ++LY L  S+     SSL  T  NK+ K  
Sbjct: 394  LDFDGYDCRFGSGKCELWHNNACIGLAVLRDELYLLSLSENVNVVSSL--TKENKKRKRT 451

Query: 350  PTNETYLWHLRLGHINLHRIQRLVRDGPLNDIKVESLPVCESCLEGKMTKRSFTSKGLRA 529
            P   + LWH RLGHI+  RI+RLV++  L  ++   L  C  C++GK  K S      R+
Sbjct: 452  PDVSSKLWHCRLGHISRGRIERLVKNEILPPLEFSDLEQCIECIKGKFVK-SIKKGAKRS 510

Query: 530  KQVLELVHSDVCGPISVQARGGYEYFITFTDDYSRYGYVYLMTRKSEALEKFKEFRSEAE 709
              +LE++H+D+CGP  V++  GY+ FITFTDDYSRYGY+Y +  +SEAL+KFK F++E E
Sbjct: 511  AGILEIIHTDICGPFPVKSVDGYDSFITFTDDYSRYGYIYPIKERSEALDKFKIFKAEVE 570

Query: 710  KQLGKSIKILRSDRGGEY---------LSNDFRTYLSENGILSQLSAPGTPQQNGVSERR 862
             Q    IK++RSDRGGEY         +   F  +L ENGI++Q S PG PQQNGV+ERR
Sbjct: 571  NQHDIKIKVVRSDRGGEYYGRHTPYGQVPGPFARFLLENGIVAQYSTPGEPQQNGVAERR 630

Query: 863  NRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSKFVPKTPLELWNGRKPNLRHIR 1042
            NRTL+DMVRSM+ +STL       A++TA+++LN V SK VPKTP ELW GR P+L H+R
Sbjct: 631  NRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWTGRVPSLTHLR 690

Query: 1043 IWGCP--AHVLKGKMEKMESRLEVCIFIGYPKGTRGYHFCSPQDKKVFVST-NATFLEDR 1213
            +WG P  A V    + K++ +   C FIGYP+ ++GY F  P     FV T +A FLED 
Sbjct: 691  VWGSPTEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRFYCPNSYTKFVETRHAVFLEDE 750

Query: 1214 YIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXXLVAGSSGRQTEAPPTVPT 1393
             I       ++ LEE R ++P+ S  E               +V      +  AP   P 
Sbjct: 751  MIRGSSVVREIDLEERRVSVPAPSTQE-------PFFSLPADVVPAMPVIEVPAPVVTP- 802

Query: 1394 RSPIPEMEGDRVPIVQ--TPLGAKDENEEHREQ------ELVGXXXXXXXXXXXXXVRRS 1549
              P+  M     P++Q  T + A  E E  + Q      +                 RRS
Sbjct: 803  --PVATMNESEEPVIQDSTEMVATPEEELQQPQIDNVPVQETHQEPQVQDVPNVQAPRRS 860

Query: 1550 GRVIRPPSR--YLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRSAMDSEMKSMYTKS 1723
             RV R   R  Y +Y        +  E+DPTSY+EAM       W  AM  EMKSM    
Sbjct: 861  ERVRRSAIRDDYKVYNIE----ESHMEDDPTSYEEAMRSARSSEWLEAMKDEMKSMKLND 916

Query: 1724 V*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARLVAKGFTQREGIDYEETFSPVAML 1903
            V DL ++P G K +GCKWVYK K    G +E +KARLVAKGFTQREGIDY ETFSPV+  
Sbjct: 917  VWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARLVAKGFTQREGIDYNETFSPVSCK 976

Query: 1904 KSIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIF 2083
             S RI++++ AH+D E+ QMDVKTAFLNG L+E++YM QP GF+ KG E+  C+LK+SI+
Sbjct: 977  DSFRIIMALVAHYDLELHQMDVKTAFLNGDLEEKVYMAQPKGFVMKGNENMGCRLKRSIY 1036

Query: 2084 GLKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGML 2263
            GLKQASR W +KFD  +K +GF +N+++ C+Y K K+ +  FL+LYVDDILL  +D+ +L
Sbjct: 1037 GLKQASRQWYLKFDGTIKKFGFQENVEDNCIYSKFKNGRFIFLILYVDDILLASSDVSLL 1096

Query: 2264 TSAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQ 2443
               K +L+  FDMKDLGEASYVLGI I RDR  K            +L++F M       
Sbjct: 1097 QETKKFLSSNFDMKDLGEASYVLGIEIHRDRTKK------------VLKKFNMYRCSATP 1144

Query: 2444 TPFRHG 2461
             P   G
Sbjct: 1145 APIMKG 1150



 Score =  201 bits (510), Expect(2) = 0.0
 Identities = 103/234 (44%), Positives = 145/234 (61%), Gaps = 1/234 (0%)
 Frame = +3

Query: 2484 CPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKHIL 2663
            CP+   E+  MK  PYASAVGSL  A +CTRPD+ +  G++ R+QSNPG EHW  VK +L
Sbjct: 1158 CPRNQYELNEMKTKPYASAVGSLQCAQVCTRPDLAFVTGLLGRFQSNPGLEHWKLVKKVL 1217

Query: 2664 KYLRRTRGYMLVYSATD-LVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQSC 2840
            +YL+ T+G ML Y  ++ L  VGY+DSDF   +D   STSG VFTL GGA+ W+S KQ+ 
Sbjct: 1218 RYLQGTKGLMLSYRRSESLQIVGYSDSDFA--KDNTKSTSGYVFTLAGGAISWKSSKQTI 1275

Query: 2841 IADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNHQ 3020
             A STM AE++A  EA  +  WL+ F+  +++V    + + LYCDN  AV  A   ++  
Sbjct: 1276 TAGSTMYAEFIACYEATGQVNWLKKFIPGLKVVDSIEKPLKLYCDNEPAVMYAHNNQSSG 1335

Query: 3021 RGKHIERKYHLVRDIVQRGDVLVSKIPSAEKSC*PFTKSLPTRSFEGHIESMGV 3182
              KHI+ KY++V+D V+   + +  I +      P TK LP   F+ H+  MG+
Sbjct: 1336 VAKHIDIKYYVVKDKVRDQTISLEHIKTERMLADPLTKGLPPNVFKEHVAGMGL 1389


>emb|CAN78154.1| hypothetical protein VITISV_032622 [Vitis vinifera]
          Length = 1250

 Score =  590 bits (1520), Expect(2) = 0.0
 Identities = 333/754 (44%), Positives = 445/754 (59%), Gaps = 19/754 (2%)
 Frame = +2

Query: 284  YTLKPS-DSSLHHTTSNKRMKLYPTNETYLWHLRLGHINLHRIQRLVRDGPLNDIKVESL 460
            + L PS + +LH  +   + KL   N   LWH RLGHI+  R++RLV DG L+ +     
Sbjct: 281  WKLFPSYNETLHVESRGTKRKLNKDNSASLWHKRLGHISKSRVERLVSDGILDSLDFSDF 340

Query: 461  PVCESCLEGKMTKRSFTSKGLRAKQVLELVHSDVCGPISVQARGGYEYFITFTDDYSRYG 640
             +C  C++GK TK        RA  VLEL+H+D+CGP    +  G +YFITF DDYSRYG
Sbjct: 341  DICVECIKGKQTKTKKLGAN-RATDVLELIHTDICGPYPTASWNGQQYFITFIDDYSRYG 399

Query: 641  YVYLMTRKSEALEKFKEFRSEAEKQLGKSIKILRSDRGGEYLSN----------DFRTYL 790
            Y++L+  KS++L+ FK F++E E QL K IK +RSDRGGEY              F  YL
Sbjct: 400  YLFLIHEKSQSLDVFKTFKAEVELQLNKRIKSVRSDRGGEYYGRYDGSGEQRPGPFAKYL 459

Query: 791  SENGILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMV 970
             E GI+ Q + PG+P  NGV+ERRNRTL DMVRSM+  STL     G A++TA Y+LN V
Sbjct: 460  EECGIVPQYTMPGSPSMNGVAERRNRTLKDMVRSMISHSTLPEKLWGEALKTAAYILNRV 519

Query: 971  LSKFVPKTPLELWNGRKPNLRHIRIWGCPAHV--LKGKMEKMESRLEVCIFIGYPKGTRG 1144
             +K   KTP ELW GRKP+L+H  IWGCPA     K   +K++S+     FIGY + +RG
Sbjct: 520  PTKAAAKTPYELWTGRKPSLKHFHIWGCPAEARPYKPHEKKLDSKTVSSYFIGYAERSRG 579

Query: 1145 YHFCSPQDKKVFVSTNATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXX 1324
            + F  P  +    + N  F E       E  S + ++ ++ +LP   I +          
Sbjct: 580  FKFYDPAIRNQ--ARNIVFEE-------EEGSTIAIDNVQVSLPI--IDQEVNLDPQPTD 628

Query: 1325 XXXXXLVAGSS---GRQTEAPP-TVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQEL 1492
                 L+A        QT+ P   +P R    E       IVQ  +  +D   E + Q+ 
Sbjct: 629  NIVQPLIANEDIVPEEQTQQPQENMPLRKSTRERRNXN--IVQPLIANEDIXXEEQTQQ- 685

Query: 1493 VGXXXXXXXXXXXXXVRRSGRVIRPP--SRYLLYGESFEAVSTEQEEDPTSYKEAMEDID 1666
                           +RRS R  R      Y++Y +  E  S   E+DP ++++A +  +
Sbjct: 686  ---------PQENMPLRRSTRERRNAISDDYIVYLQEREVESGMMEDDPINFQQAXKSSN 736

Query: 1667 VDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARLVAKG 1846
               W  AM+ E KSM    V +LV LP G KPIGCKW++K KR  +G VE YKARLVAKG
Sbjct: 737  SXKWIEAMNEEYKSMQDNKVWELVPLPVGTKPIGCKWIFKTKRDSNGNVERYKARLVAKG 796

Query: 1847 FTQREGIDYEETFSPVAMLKSIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPD 2026
            FTQ+EGID++ETFSPV+   S RI++++ AH+D E+ QMDVKTAFLNG +DE IYM+QP+
Sbjct: 797  FTQKEGIDFKETFSPVSTKDSFRIIMALVAHYDLELHQMDVKTAFLNGDIDETIYMVQPE 856

Query: 2027 GFIQKGQEHRVCKLKKSIFGLKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVT 2206
             F+ +  ++ VCKL KSI+GLKQASR W  KF Q + SYGF+ NL + CVY K   +K  
Sbjct: 857  NFVSEDSKNMVCKLTKSIYGLKQASRQWYFKFHQIIVSYGFEANLMDECVYHKFSGSKYI 916

Query: 2207 FLVLYVDDILLIGNDIGMLTSAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQA 2386
            FLVLYVDDILL  NDI +L   K +L++ F+MKDLG+AS+VLGI+I RDR    + LSQ 
Sbjct: 917  FLVLYVDDILLATNDIXILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQR 976

Query: 2387 SYIDNILERFAMQNSKKGQTPFRHGIHLSRGALP 2488
            +YID +L+R+ MQNSK G TP   G   S    P
Sbjct: 977  TYIDKVLQRYGMQNSKPGDTPVAKGDKFSLNQCP 1010



 Score =  227 bits (578), Expect(2) = 0.0
 Identities = 107/240 (44%), Positives = 155/240 (64%), Gaps = 1/240 (0%)
 Frame = +3

Query: 2484 CPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKHIL 2663
            CPK   E + M+K+PYASAVGSLMYA +CTRPDI Y VG++ RY SNPG +HW A K ++
Sbjct: 1009 CPKNXLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVM 1068

Query: 2664 KYLRRTRGYMLVYSATD-LVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQSC 2840
            +YL+RT+ YML Y   D L  +GY+DSDF   +D+R STSG ++ L GGA+ WRS KQ+ 
Sbjct: 1069 RYLQRTKEYMLTYRRLDQLELIGYSDSDFAGCQDSRRSTSGYIYLLAGGAISWRSAKQTL 1128

Query: 2841 IADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNHQ 3020
            +  STMEAE+VA  EA+ + +WLRNF+  + ++    + + ++CDN  AV  +   R+  
Sbjct: 1129 VTSSTMEAEFVACYEASNQGIWLRNFVTGLRVLDGIERPLKIFCDNKSAVLYSNNNRSST 1188

Query: 3021 RGKHIERKYHLVRDIVQRGDVLVSKIPSAEKSC*PFTKSLPTRSFEGHIESMGVLDMSHL 3200
            + K+I+ K+ +V++ VQ G + +  I +      P TK LP + F  H   MGV+    +
Sbjct: 1189 KSKYIDIKFLVVKEKVQSGQISIEHIGTNSMIADPLTKGLPPKVFHEHTAHMGVVSFEDI 1248


>emb|CAH67504.1| OSIGBa0134H18.6 [Oryza sativa Indica Group]
          Length = 1261

 Score =  608 bits (1569), Expect(2) = 0.0
 Identities = 337/755 (44%), Positives = 450/755 (59%), Gaps = 27/755 (3%)
 Frame = +2

Query: 278  DLYTLKPSD-----SSLHHTTSNKRMKLYPTNETYLWHLRLGHINLHRIQRLVRDGPLND 442
            +LY L  S+     SSL  T  NK+ K  P   + LWH RLGHI+  RI+RLV++  L  
Sbjct: 281  ELYLLSLSENVNVVSSL--TKENKKRKRTPDVSSKLWHCRLGHISRGRIERLVKNEILPP 338

Query: 443  IKVESLPVCESCLEGKMTKRSFTSKGLRAKQVLELVHSDVCGPISVQARGGYEYFITFTD 622
            ++   L  C  C++GK  K S      R+  +LE++H+D+CGP  V++  GY+ FITF D
Sbjct: 339  LEFSDLEQCIECIKGKFVK-SIKKGAKRSAGILEIIHTDICGPFPVKSVDGYDSFITFID 397

Query: 623  DYSRYGYVYLMTRKSEALEKFKEFRSEAEKQLGKSIKILRSDRGGEY---------LSND 775
            DYSRYGY+Y +  +SEAL+KFK F++E E Q    IK++RSDRGGEY         +   
Sbjct: 398  DYSRYGYIYPIKERSEALDKFKIFKAEVENQHDIKIKVVRSDRGGEYYGRHTPYGQVPGP 457

Query: 776  FRTYLSENGILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVY 955
            F  +L ENGI++Q S PG PQQNGV+ERRNRTL+DMVRSM+ +STL       A++TA++
Sbjct: 458  FARFLLENGIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTAIH 517

Query: 956  LLNMVLSKFVPKTPLELWNGRKPNLRHIRIWGCPAH--VLKGKMEKMESRLEVCIFIGYP 1129
            +LN V SK VPK P ELW GR P+L H+R+WG PA   V    + K++ +   C FIGYP
Sbjct: 518  ILNRVPSKSVPKAPYELWTGRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYP 577

Query: 1130 KGTRGYHFCSPQDKKVFVST-NATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXX 1306
            + ++GY F  P     FV T +A FLED  I       ++ LEE R ++P+ S  E    
Sbjct: 578  ERSKGYRFYCPNSYTKFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVPTPSTQE---- 633

Query: 1307 XXXXXXXXXXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQ--TPLGAKDENEEHR 1480
                       +V      +  AP   P   P+  M     P++Q  T + A  E E  +
Sbjct: 634  ---PFFSLPADVVPAMPVIEVPAPVVTP---PVATMNESEEPVIQDSTEMVATPEEELQQ 687

Query: 1481 EQ------ELVGXXXXXXXXXXXXXVRRSGRVIRPPSR--YLLYGESFEAVSTEQEEDPT 1636
             Q      +                 RRS RV R   R  Y +Y        +  E+DPT
Sbjct: 688  PQIDNVPIQETHQEPQVQDVPNVQAPRRSERVRRSAIRDDYKVYNIE----ESHMEDDPT 743

Query: 1637 SYKEAMEDIDVDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVE 1816
            SY+EAM       W  AM  EMKSM    V DL ++P G K +GCKWVYK K    G +E
Sbjct: 744  SYEEAMRSARSSEWLEAMKDEMKSMKLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIE 803

Query: 1817 TYKARLVAKGFTQREGIDYEETFSPVAMLKSIRILLSIAAHFDYEVWQMDVKTAFLNGSL 1996
             +KARLVAKGFTQREGIDY ETFSPV+   S RI++++ AH+D E+ QMDVKTAFLNG L
Sbjct: 804  KFKARLVAKGFTQREGIDYNETFSPVSCKDSFRIIIALVAHYDLELHQMDVKTAFLNGDL 863

Query: 1997 DERIYMMQPDGFIQKGQEHRVCKLKKSIFGLKQASRSWNIKFDQAVKSYGFDQNLDEPCV 2176
            +E++YM QP GF+ KG E+  C+LK+SI+GLKQASR W +KFD  +K +GF +N+++ C+
Sbjct: 864  EEKVYMAQPKGFVTKGNENMGCRLKRSIYGLKQASRQWYLKFDGTIKKFGFQENVEDNCI 923

Query: 2177 YKKIKDNKVTFLVLYVDDILLIGNDIGMLTSAKCWLAQQFDMKDLGEASYVLGIRIFRDR 2356
            Y K K+ +  FL+LYVDDILL  +D+ +L   K +L+  FDMKDLGEASYVLGI I RDR
Sbjct: 924  YSKFKNGRFIFLILYVDDILLASSDVSLLQETKKFLSSNFDMKDLGEASYVLGIEIHRDR 983

Query: 2357 KNKRIALSQASYIDNILERFAMQNSKKGQTPFRHG 2461
                + LSQ +YI+ +L++F M   +    P   G
Sbjct: 984  TKYALGLSQKTYIEKVLKKFNMYRCRATPAPIMKG 1018



 Score =  202 bits (515), Expect(2) = 0.0
 Identities = 103/234 (44%), Positives = 145/234 (61%), Gaps = 1/234 (0%)
 Frame = +3

Query: 2484 CPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKHIL 2663
            CP+   E+  MK  PYASAVGSL YA +CTRPD+ +  G++ R+QSNPG EHW  VK +L
Sbjct: 1026 CPRNQYELNEMKTKPYASAVGSLQYAQVCTRPDLAFVTGLLGRFQSNPGLEHWKLVKKVL 1085

Query: 2664 KYLRRTRGYMLVYSATD-LVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQSC 2840
            +YL+ T+G ML Y  ++ L  VGY+D DF   +D   STSG VFTL GGA+ W+S KQ+ 
Sbjct: 1086 RYLQGTKGLMLSYRRSESLQIVGYSDPDFA--KDNTKSTSGYVFTLAGGAISWKSSKQTI 1143

Query: 2841 IADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNHQ 3020
             A STM AE++A  EA  +  WL+ F+  +++V    + + LYCDN  AV  A   ++  
Sbjct: 1144 TAGSTMYAEFIACYEATGQVNWLKKFIPGLKVVDSIEKPLKLYCDNEPAVMYAHNNQSSG 1203

Query: 3021 RGKHIERKYHLVRDIVQRGDVLVSKIPSAEKSC*PFTKSLPTRSFEGHIESMGV 3182
              KHI+ KY++V+D V+   + +  I +      P TK LP   F+ H+  MG+
Sbjct: 1204 ADKHIDIKYYVVKDKVRDQTISLEHIKTERMLADPLTKGLPPNVFKEHVAGMGL 1257


>gb|ABA94504.1| transposon protein, putative, unclassified [Oryza sativa Japonica
            Group]
          Length = 1230

 Score =  627 bits (1616), Expect(2) = 0.0
 Identities = 356/844 (42%), Positives = 487/844 (57%), Gaps = 25/844 (2%)
 Frame = +2

Query: 5    FQVTRELNEGEHTLRXXXXXXXXXXXXXXXYLYFSNNKHLVLKNCYYVPDITRNLIYVAL 184
            F+ TR     E ++R                L  +N   L+L++ +YVP + RNLI V+ 
Sbjct: 225  FRSTRTTQRRESSIRVANGVEEKVEAVGDLPLELANGFTLLLRDVFYVPSLQRNLISVSK 284

Query: 185  LFKQGYYVHFSPMAVDITLNKALICKGHVNNDLYTLKPSD-----SSLHHTTSNKRMKLY 349
            L   GY   F     ++  N A I    + ++LY L  S+     SSL  T  NK+ K  
Sbjct: 285  LDFDGYDCRFGSGKCELWYNNACIGLAVLRDELYLLSLSENVNVVSSL--TKENKKRKRT 342

Query: 350  PTNETYLWHLRLGHINLHRIQRLVRDGPLNDIKVESLPVCESCLEGKMTKRSFTSKGLRA 529
            P   + LWH RLGHI+  RI+RLV++  L  ++   L  C  C++GK    S      R+
Sbjct: 343  PDVSSKLWHYRLGHISRGRIERLVKNEILPPLEFSDLEQCIECIKGKFVN-SIKKGAKRS 401

Query: 530  KQVLELVHSDVCGPISVQARGGYEYFITFTDDYSRYGYVYLMTRKSEALEKFKEFRSEAE 709
              +LE++H+D+CGP  V++  GY+ FITFTDDYSRYGY+Y +  +SEAL+KFK F+++ E
Sbjct: 402  AGILEIIHTDICGPFPVKSVDGYDSFITFTDDYSRYGYIYPIKERSEALDKFKIFKAKVE 461

Query: 710  KQLGKSIKILRSDRGGEY---------LSNDFRTYLSENGILSQLSAPGTPQQNGVSERR 862
             Q    IK++RSDRGGEY         +   F  +L ENGI++Q S PG PQQNGV+ER 
Sbjct: 462  NQHDIKIKVVRSDRGGEYYGRHTPYGQVPGPFARFLLENGIVAQYSTPGEPQQNGVAERC 521

Query: 863  NRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSKFVPKTPLELWNGRKPNLRHIR 1042
            NRTL+DMVRSM+ +STL       A++TA+++LN V SK +PKTP ELW GR P+L H+R
Sbjct: 522  NRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSKSMPKTPYELWTGRVPSLAHLR 581

Query: 1043 IWGCP--AHVLKGKMEKMESRLEVCIFIGYPKGTRGYHFCSPQDKKVFVST-NATFLEDR 1213
            +WG P  A V    + K++ +   C FIGYP+ ++GY F  P     FV T +A FLED 
Sbjct: 582  VWGSPVEAKVFNPNIGKLDPKTISCHFIGYPQRSKGYRFYCPNSYIKFVETRHAVFLEDE 641

Query: 1214 YIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXXLVAGSSGRQTEAPPTVPT 1393
             I       ++ LEE R ++P+ S  E               +V      +  AP   P 
Sbjct: 642  MIRGSSVVREIALEERRVSVPAPSTQE-------PFFSLPADVVPAMPVIEVPAPVVTPP 694

Query: 1394 RSPIPEMEG------DRVPIVQTPLGAKDENEEHREQELVGXXXXXXXXXXXXXVRRSGR 1555
             + + E E       D VP+ +T        +E + Q++                RRS R
Sbjct: 695  VATMNEKEELQQPQTDNVPVQET-------QQEPQVQDVPNVQAP----------RRSER 737

Query: 1556 VIRPPSR--YLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRSAMDSEMKSMYTKSV* 1729
            V R   R  Y +Y        +  ++DPTSY+EAM       W  AM  EMKSM    V 
Sbjct: 738  VRRSAIRDDYKVYNIE----ESHMDDDPTSYEEAMRSARSSEWLEAMKDEMKSMKLNDVW 793

Query: 1730 DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARLVAKGFTQREGIDYEETFSPVAMLKS 1909
            DL ++P G K + CKWVYK K    G +E +KARLVAKGFTQREGIDY ETFSPV+   S
Sbjct: 794  DLEEIPKGAKTVACKWVYKTKYDSKGNIEKFKARLVAKGFTQREGIDYTETFSPVSCKDS 853

Query: 1910 IRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFGL 2089
             RI++++ AH+D E+ QMDVKTAFLNG L+E++YM QP GF+ KG E+  C+LK+SI+GL
Sbjct: 854  FRIIMALVAHYDLELHQMDVKTAFLNGDLEEKVYMAQPKGFVMKGNENMGCRLKRSIYGL 913

Query: 2090 KQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLTS 2269
            KQASR W +KFD  +K +GF +N+++ C+Y K K+ +  FL+LYVDDILL  +D+ +L  
Sbjct: 914  KQASRQWYLKFDGTIKKFGFQENVEDNCIYLKFKNGRFIFLILYVDDILLASSDVSLLQE 973

Query: 2270 AKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQTP 2449
             K +L+  FDMKDLGEASYVLGI I RDR    + LSQ +YI+ +L++F M        P
Sbjct: 974  IKKFLSSNFDMKDLGEASYVLGIEIHRDRTKYTLGLSQKTYIEKVLKKFNMYRCSATPAP 1033

Query: 2450 FRHG 2461
               G
Sbjct: 1034 IVKG 1037



 Score =  177 bits (448), Expect(2) = 0.0
 Identities = 88/186 (47%), Positives = 120/186 (64%), Gaps = 1/186 (0%)
 Frame = +3

Query: 2484 CPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKHIL 2663
            CP+   E+  MK  PYASAVGSL YA +CTRPD+ +  G++ R+QSNPG EHW  VK +L
Sbjct: 1045 CPRNQYELNKMKTKPYASAVGSLQYAQVCTRPDLAFVTGLLGRFQSNPGLEHWKLVKKVL 1104

Query: 2664 KYLRRTRGYMLVY-SATDLVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQSC 2840
            +Y + T+G ML Y  +  L  VGY+DSDF   +D   STSG VFTL GGA+ W+S KQ+ 
Sbjct: 1105 RYFQGTKGLMLSYRRSKSLQIVGYSDSDFA--KDNTKSTSGYVFTLAGGAISWKSSKQTI 1162

Query: 2841 IADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNHQ 3020
             A+STM AE++A  EA  +  WL+ F+  +++V    + + LYCDN  AV  A   ++  
Sbjct: 1163 TAESTMYAEFIACYEATGQVNWLKKFIPGLKVVDSIEKPLKLYCDNEPAVMYAHNNQSSG 1222

Query: 3021 RGKHIE 3038
              KHI+
Sbjct: 1223 AAKHID 1228


>emb|CAN74511.1| hypothetical protein VITISV_011891 [Vitis vinifera]
          Length = 1283

 Score =  591 bits (1523), Expect(2) = 0.0
 Identities = 340/794 (42%), Positives = 447/794 (56%), Gaps = 18/794 (2%)
 Frame = +2

Query: 122  LVLKNCYYVPDITRNLIYVALLFKQGYYVHFSPMAVDITLNKALICKGHVNNDLYTLKPS 301
            L L+  + VP    NLI V+ L K GY   F    V + LN  +I  G + + LY L   
Sbjct: 280  LNLEETFVVPSFRWNLISVSCLDKFGYCCSFGNGMVSLYLNSNIIGTGSLTDKLYKLNIK 339

Query: 302  ----DSSLHHTTSNKRMKLYPTNETYLWHLRLGHINLHRIQRLVRDGPLNDIKVESLPVC 469
                + +LH +    + KL   N + LWH RLGHI+  RIQRLV DG L+ +      V 
Sbjct: 340  ATNRNETLHSSNYGIKRKLMNENSSMLWHKRLGHISNQRIQRLVSDGILDPLDFSDFQVY 399

Query: 470  ESCLEGKMTKRSFTSKGLRAKQVLELVHSDVCGPISVQARGGYEYFITFTDDYSRYGYVY 649
              C++GK T               + +  D+CGP    +  G +YFITF +DYS YGY+Y
Sbjct: 400  IECIKGKQTNMK------------KRMSIDICGPFPTPSWNGQQYFITFINDYSLYGYLY 447

Query: 650  LMTRKSEALEKFKEFRSEAEKQLGKSIKILRSDRGGEYLSN----------DFRTYLSEN 799
            L+  KS++L+ FK F++E E QL K IK +RSDRGGEY              F  YL E 
Sbjct: 448  LIHEKSQSLDVFKNFKAEVENQLSKKIKAVRSDRGGEYCGRYDGSGEQRPGPFAKYLMEC 507

Query: 800  GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 979
            GI+ Q + PGT  QNGV+ERRN TL DMVRSM+  STL  S  G AI+TAVY+LN V SK
Sbjct: 508  GIVPQYTTPGTSSQNGVAERRNHTLKDMVRSMISHSTLPESLWGEAIKTAVYILNRVPSK 567

Query: 980  FVPKTPLELWNGRKPNLRHIRIWGCPAHV--LKGKMEKMESRLEVCIFIGYPKGTRGYHF 1153
             V KTP ELW  +KP++RH+ +WGCPA     K   +K++SR   C F+GY + +RG+ F
Sbjct: 568  AVAKTPYELWTSKKPSIRHLHVWGCPAEAKPYKPNEKKLDSRTVSCYFVGYSERSRGFKF 627

Query: 1154 CSPQDKKVFVSTNATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXX 1333
              P  +  F + NA F+ED  +   E   KV+ EE   N     IP I            
Sbjct: 628  YDPSTRSFFETGNAKFIEDVELSGREPLRKVVFEEEFVN-----IPNITTGHGHIMFNDT 682

Query: 1334 XXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQELVGXXXXX 1513
               V   +G Q + P   PT+             V  P+    E  +  ++  V      
Sbjct: 683  IQNVQSITGIQ-DTPEIPPTQ-------------VMEPIQVHQEVTQQPQEPQV------ 722

Query: 1514 XXXXXXXXVRRSGRVIRPP--SRYLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRSA 1687
                    +RRS R  R      Y++Y +  E      E+DP S  +  +  D + W  A
Sbjct: 723  -----QVPLRRSTRERRSTISDDYVVYLQEHE-FDMGLEDDPISVSQVKQSFDSEKWIEA 776

Query: 1688 MDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARLVAKGFTQREGI 1867
            M  EMKSM    V DL +LP GVK IGCKW++K KR   G +  YKARLVAKGFTQ+EGI
Sbjct: 777  MKDEMKSMKDNGVWDLEELPKGVKSIGCKWIFKTKRDSKGNIVKYKARLVAKGFTQKEGI 836

Query: 1868 DYEETFSPVAMLKSIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQ 2047
            DY+ETFSPV+   S RI++++ AH+D E+ QMDVKTAFLNG++DE IYM+QP+ F     
Sbjct: 837  DYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESXDS 896

Query: 2048 EHRVCKLKKSIFGLKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVD 2227
            +  VC+LK+SI+GLKQASR W  KFDQ + S+GF +N  + C+Y K   +K   LVLYVD
Sbjct: 897  KQLVCRLKRSIYGLKQASRQWYRKFDQVITSFGFKENTVDQCIYLKFSGSKFIILVLYVD 956

Query: 2228 DILLIGNDIGMLTSAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNIL 2407
            DILL  +D+ +L   K +L+ +FDMKDLG AS+VLGI+I RDR    + LSQ +YID +L
Sbjct: 957  DILLASSDVXLLHETKRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVL 1016

Query: 2408 ERFAMQNSKKGQTP 2449
             RF M N   G TP
Sbjct: 1017 SRFGMSNCAPGDTP 1030



 Score =  212 bits (540), Expect(2) = 0.0
 Identities = 106/243 (43%), Positives = 151/243 (62%), Gaps = 1/243 (0%)
 Frame = +3

Query: 2460 EFTCHGEHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEH 2639
            +F+ H   CPK   E + M++ PYASAVGSLMYA +CTRPDI Y VG++ RY SNPG +H
Sbjct: 1036 KFSLH--QCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDH 1093

Query: 2640 WIAVKHILKYLRRTRGYMLVYSA-TDLVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVI 2816
            W   K +++YL+RT+ YML Y   + L  VGY DSDF    D+R STS  +F L GGAV 
Sbjct: 1094 WKKAKRVMRYLQRTKDYMLTYRIXSHLEIVGYXDSDFAGCLDSRRSTSXYIFMLAGGAVS 1153

Query: 2817 WRSIKQSCIADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVAN 2996
            W+S+KQ+ I  STMEAE++A  EA+   +WLRNF+  + +V    + + + CDN  A   
Sbjct: 1154 WKSVKQTLIXSSTMEAEFIACYEASNHGIWLRNFVTQLRIVDXIEKPLXINCDNKAAELY 1213

Query: 2997 AREPRNHQRGKHIERKYHLVRDIVQRGDVLVSKIPSAEKSC*PFTKSLPTRSFEGHIESM 3176
            ++  R+  + KHI+ K+ +V++ VQ   V +  I +        TK LP + +  H+  M
Sbjct: 1214 SKNNRSSSKSKHIDIKFLVVKEKVQSLQVSIEHISTNSMIADXLTKGLPPKVYHEHVTHM 1273

Query: 3177 GVL 3185
            GV+
Sbjct: 1274 GVV 1276


>gb|AAS98437.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1362

 Score =  589 bits (1519), Expect(2) = 0.0
 Identities = 346/846 (40%), Positives = 465/846 (54%), Gaps = 27/846 (3%)
 Frame = +2

Query: 5    FQVTRELNEGEHTLRXXXXXXXXXXXXXXXYLYFSNNKHLVLKNCYYVPDITRNLIYVAL 184
            F+ TR     E T+R                L  +N   L+L++ +YVP + RNLI V+ 
Sbjct: 326  FRSTRTTQGRESTIRVANGVEEKVEAVGDLPLELANGFTLLLRDVFYVPSLQRNLISVSK 385

Query: 185  LFKQGYYVHFSPMAVDITLNKALICKGHVNNDLYTLKPSD-----SSLHHTTSNKRMKLY 349
            L   GY   F     ++  N A I    + ++LY L  S+     SSL  T  NK+ K  
Sbjct: 386  LDFDGYDCRFGSGKCELWHNNACIGLAVLRDELYLLSLSENVNVVSSL--TKENKKRKRT 443

Query: 350  PTNETYLWHLRLGHINLHRIQRLVRDGPLNDIKVESLPVCESCLEGKMTKRSFTSKGLRA 529
            P   + LWH RLGHI+  RI+RLV++  L  ++   L  C  C++GK  K          
Sbjct: 444  PDVSSKLWHCRLGHISRGRIERLVKNEILPPLEFSDLEQCIECIKGKFVK---------- 493

Query: 530  KQVLELVHSDVCGPISVQARGGYEYFITFTDDYSRYGYVYLMTRKSEALEKFKEFRSEAE 709
                           S++            DDYSRYGY+Y +  +SEAL+KFK F++E E
Sbjct: 494  ---------------SIKK-----------DDYSRYGYIYPIKERSEALDKFKIFKAEVE 527

Query: 710  KQLGKSIKILRSDRGGEY---------LSNDFRTYLSENGILSQLSAPGTPQQNGVSERR 862
             QL   IK++RSDRGGEY         +   F  +L ENGI++Q S PG PQQNGV+ERR
Sbjct: 528  NQLDIKIKVVRSDRGGEYYGRHTPYGQVPRPFARFLLENGIVAQYSTPGEPQQNGVAERR 587

Query: 863  NRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSKFVPKTPLELWNGRKPNLRHIR 1042
            NRTL+D+VRSM+ +STL       A++TA+++LN V SK VPKTP ELW GR P+L H+R
Sbjct: 588  NRTLMDIVRSMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWTGRVPSLTHLR 647

Query: 1043 IWGCPAH--VLKGKMEKMESRLEVCIFIGYPKGTRGYHFCSPQDKKVFVST-NATFLEDR 1213
            +WG PA   V    + K++ +   C FIGYP+ ++GY F  P     FV T +A FLED 
Sbjct: 648  VWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRFYCPNSYTKFVETRHAVFLEDE 707

Query: 1214 YIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXXLVAGSSGRQTEAPPTVPT 1393
             I       ++ LEE R ++P+ S  E               +V      +  AP   P 
Sbjct: 708  MIRGSSVVREIDLEERRVSVPAPSTQE-------PFFSLPADVVPAMPVIEVPAPVVTP- 759

Query: 1394 RSPIPEMEGDRVPIVQTPLGAKDENEEHREQELVGXXXXXXXXXXXXXV--------RRS 1549
              P+  M     P++Q         EE  +Q  +                       RRS
Sbjct: 760  --PVATMNESEEPVIQDSTEMVVTPEEELQQPQIDNVPVQETHQEPQVQDVPNVQAPRRS 817

Query: 1550 GRVIRPPSR--YLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRSAMDSEMKSMYTKS 1723
             RV R   R  Y +Y        +  E+DPTSY+EAM       W  AM  EMKSM   +
Sbjct: 818  ERVRRSAIRDDYKVYNIE----ESHMEDDPTSYEEAMRSARSSEWLEAMKDEMKSMKLNN 873

Query: 1724 V*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARLVAKGFTQREGIDYEETFSPVAML 1903
            V DL ++P G K +GCKWVYK K    G +E +KARLVAKGFTQREGIDY ETFSPV+  
Sbjct: 874  VWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARLVAKGFTQREGIDYNETFSPVSCK 933

Query: 1904 KSIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIF 2083
             S RI++++ AH+D E+ QMDVKTAFLNG L+E++YM QP GF+ KG E+  C+LK+SI+
Sbjct: 934  DSFRIIMALVAHYDLELHQMDVKTAFLNGDLEEKVYMAQPKGFVMKGNENMGCRLKRSIY 993

Query: 2084 GLKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGML 2263
            GLKQASR W +KFD  +K +GF +N+++ C+Y K K+ +  FL+LYVDDILL  +D+ +L
Sbjct: 994  GLKQASRQWYLKFDGTIKKFGFQENVEDNCIYSKFKNGRFIFLILYVDDILLASSDVSLL 1053

Query: 2264 TSAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQ 2443
               K +L+  FDMKDLGEASYVLGI I RDR    + LSQ +YI+ +L++F M       
Sbjct: 1054 QETKKFLSSNFDMKDLGEASYVLGIEIHRDRTKYALGLSQKTYIEKVLKKFNMYRCSATP 1113

Query: 2444 TPFRHG 2461
             P   G
Sbjct: 1114 APIMKG 1119



 Score =  204 bits (519), Expect(2) = 0.0
 Identities = 103/234 (44%), Positives = 145/234 (61%), Gaps = 1/234 (0%)
 Frame = +3

Query: 2484 CPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKHIL 2663
            CP+   E+  MK  PYASAVGSL YA +CTRPD+ +  G++ R+QSNPG EHW  VK +L
Sbjct: 1127 CPRNQYELNEMKTKPYASAVGSLQYAQVCTRPDLAFVTGLLGRFQSNPGLEHWKLVKKVL 1186

Query: 2664 KYLRRTRGYMLVYSATD-LVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQSC 2840
            +YL+ T+G ML Y  ++ L  VGY+DSDF   +D   STSG VFTL GGA+ W+S KQ+ 
Sbjct: 1187 RYLQGTKGLMLTYRRSESLQIVGYSDSDFA--KDNTKSTSGYVFTLAGGAISWKSSKQTI 1244

Query: 2841 IADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNHQ 3020
             A STM AE++A  EA  +  WL+ F+  +++V    + + LYCDN   V  A   ++  
Sbjct: 1245 TAGSTMYAEFIACYEATGQVNWLKKFIPGLKVVDSIEKPLKLYCDNEPTVMYAHNNQSSG 1304

Query: 3021 RGKHIERKYHLVRDIVQRGDVLVSKIPSAEKSC*PFTKSLPTRSFEGHIESMGV 3182
              KHI+ KY++V+D V+   + +  I +      P TK LP   F+ H+  MG+
Sbjct: 1305 AAKHIDIKYYVVKDKVRDQTISLEHIKTERMLADPLTKGLPPNVFKEHVAGMGL 1358


>gb|ABA97777.1| transposon protein, putative, unclassified [Oryza sativa Japonica
            Group]
          Length = 1378

 Score =  588 bits (1516), Expect(2) = 0.0
 Identities = 341/837 (40%), Positives = 464/837 (55%), Gaps = 18/837 (2%)
 Frame = +2

Query: 5    FQVTRELNEGEHTLRXXXXXXXXXXXXXXXYLYFSNNKHLVLKNCYYVPDITRNLIYVAL 184
            F+ TR     E T+R                L  +N   L+L++ +YVP + RNLI V+ 
Sbjct: 364  FRSTRTTQRRESTIRVANGVEEKVEAVGDLPLELANGFILLLRDVFYVPSLQRNLISVSK 423

Query: 185  LFKQGYYVHFSPMAVDITLNKALICKGHVNNDLYTLKPSD-----SSLHHTTSNKRMKLY 349
            L   GY   F     ++  N A I    + ++LY L  S+     SSL  T  NK+ K  
Sbjct: 424  LDFDGYDCRFGSGKCELWHNNACIGLAVLRDELYLLSLSENVNVVSSL--TKENKKRKRT 481

Query: 350  PTNETYLWHLRLGHINLHRIQRLVRDGPLNDIKVESLPVCESCLEGKMTKRSFTSKGLRA 529
            P   + LWH RLGHI+  RI+RLV++  L  ++   L  C  C++GK  K S      R+
Sbjct: 482  PDVSSKLWHCRLGHISRGRIERLVKNEILPPLEFSDLEQCIECIKGKFVK-SIKKGAKRS 540

Query: 530  KQVLELVHSDVCGPISVQARGGYEYFITFTDDYSRYGYVYLMTRKSEALEKFKEFRSEAE 709
              +LE++H+D+CGP  V++  GY+ FITFTDDYSRYGY+Y +  +SEAL+KFK F++E E
Sbjct: 541  AGILEIIHTDICGPFPVKSVDGYDSFITFTDDYSRYGYIYPIKERSEALDKFKIFKAEVE 600

Query: 710  KQLGKSIKILRSDRGGEYLSNDFRTYLSENGILSQLSAPGTPQQNGVSERRNRTLLDMVR 889
             Q    I +                                   NGV+ERRNRTL+DMVR
Sbjct: 601  NQHDIKINV-----------------------------------NGVAERRNRTLMDMVR 625

Query: 890  SMLGFSTLATSFCGYAIQTAVYLLNMVLSKFVPKTPLELWNGRKPNLRHIRIWGCPAH-- 1063
            SM+ +STL       A++TA+++LN V SK VPKTP ELW GR P+L H+R+WG PA   
Sbjct: 626  SMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWTGRVPSLTHLRVWGSPAEAK 685

Query: 1064 VLKGKMEKMESRLEVCIFIGYPKGTRGYHFCSPQDKKVFVST-NATFLEDRYIEECESKS 1240
            V    + K++ +   C FIGYP+ ++GY F  P     FV T +A FLED  I       
Sbjct: 686  VFNPNIGKLDPKTVSCHFIGYPERSKGYRFYCPNSYTKFVETRHAVFLEDEMIRGSSVVR 745

Query: 1241 KVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXXLVAGSSGRQTEAPPTVPTRSPIPEMEG 1420
            ++ LEE R ++P+ S  E+              +V      + +AP   P   P+  M  
Sbjct: 746  EIDLEERRVSVPAPSTQEL-------FFSLPADVVPAMPVIEVQAPVVTP---PVATMNE 795

Query: 1421 DRVPIVQ--TPLGAKDENEEHREQ------ELVGXXXXXXXXXXXXXVRRSGRVIRPPSR 1576
               P++Q  T + A  E E  + Q      +                 RRS RV R   R
Sbjct: 796  SEEPVIQDSTEMVATPEEELQQPQIDNVPVQETHQEPQVQDVPNVQAPRRSERVRRSAIR 855

Query: 1577 --YLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRSAMDSEMKSMYTKSV*DLVDLPN 1750
              Y +Y        +  E+DPTSY+EAM       W  AM  EMKSM    V DL ++P 
Sbjct: 856  DDYKVYNIE----ESHMEDDPTSYEEAMRSARSSEWLEAMKDEMKSMKLNDVWDLEEIPK 911

Query: 1751 GVKPIGCKWVYKRKRGIDGKVETYKARLVAKGFTQREGIDYEETFSPVAMLKSIRILLSI 1930
            G K +GCKWVYK K    G +E +KARLVAKGFTQREGIDY ETFSPV+   S RI++++
Sbjct: 912  GAKTVGCKWVYKTKYDSRGNIEKFKARLVAKGFTQREGIDYNETFSPVSCKDSFRIIMAL 971

Query: 1931 AAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFGLKQASRSW 2110
             AH+D E+ QMDVKTAFLNG L+E++YM QP GF+ KG E+  C+L++SI+GLKQASR W
Sbjct: 972  VAHYDLELHQMDVKTAFLNGDLEEKVYMAQPKGFVMKGNENMGCRLRRSIYGLKQASRQW 1031

Query: 2111 NIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLTSAKCWLAQ 2290
             +KFD  +K +GF +N+++ C+Y K K+ +  FL+LYVDDILL  +D+ +L   K +L+ 
Sbjct: 1032 YLKFDGTIKKFGFQENVEDNCIYSKFKNGRFIFLILYVDDILLASSDVSLLQETKKFLSS 1091

Query: 2291 QFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQTPFRHG 2461
             FDMKDLGEASYVLGI I RDR    + LSQ +YI+ +L++F M        P   G
Sbjct: 1092 NFDMKDLGEASYVLGIEIHRDRTKYALGLSQKTYIEKVLKKFNMYRCSATPAPIMKG 1148



 Score =  194 bits (494), Expect(2) = 0.0
 Identities = 100/225 (44%), Positives = 140/225 (62%), Gaps = 1/225 (0%)
 Frame = +3

Query: 2484 CPKTPSEVEYMKKVPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGPEHWIAVKHIL 2663
            CP+   E+  MK  PYASAVGSL YA +CTRP++ +  G++ R+QSNPG EHW  VK +L
Sbjct: 1156 CPRNQYELNEMKTKPYASAVGSLQYAQVCTRPNLAFVTGLLGRFQSNPGLEHWKLVKKVL 1215

Query: 2664 KYLRRTRGYMLVYSATD-LVPVGYTDSDFQADRDTRNSTSGSVFTLGGGAVIWRSIKQSC 2840
            +YL+ T+G ML Y  ++ L  VGY+DSDF   +D   STSG VFTL GGA+ W+S KQ+ 
Sbjct: 1216 RYLQGTKGLMLSYRRSESLQIVGYSDSDFA--KDNTKSTSGYVFTLAGGAISWKSSKQTI 1273

Query: 2841 IADSTMEAEYVAACEAAKEAVWLRNFLLSIEMVPFASQAITLYCDNSGAVANAREPRNHQ 3020
             A STM AE++A  EA  +  WL+ F+  +++V    + + LYCDN  AV  A   ++  
Sbjct: 1274 TAGSTMYAEFIACYEAMGQVNWLKKFIPGLKVVDSIEKPLKLYCDNEPAVMYAHNNQSSG 1333

Query: 3021 RGKHIERKYHLVRDIVQRGDVLVSKIPSAEKSC*PFTKSLPTRSF 3155
              KHI+ KY++V+D V+   + +  I +      P TK LP   F
Sbjct: 1334 AAKHIDIKYYVVKDKVRDQTISLEHIKTERMLADPLTKGLPPNVF 1378