BLASTX nr result

ID: Rehmannia22_contig00024465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00024465
         (399 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004240247.1| PREDICTED: F-box protein At5g07610-like [Sol...    64   3e-08
ref|XP_006366529.1| PREDICTED: F-box protein At5g07610-like [Sol...    60   4e-07

>ref|XP_004240247.1| PREDICTED: F-box protein At5g07610-like [Solanum lycopersicum]
          Length = 383

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
 Frame = +2

Query: 2   SEWFVKYTVDLSS--NSYYIGHSFPICTLIRGKKDEDSFLILRTTKG--IIRYNLACGTS 169
           SEWF+KY VD     +  +  ++F I +L+RGK++ED+FL+L       +++YN    T 
Sbjct: 293 SEWFIKYKVDFEHPYDHEFKYYNFAILSLVRGKREEDAFLVLAVVNDDKVMKYNFINKTF 352

Query: 170 EIIDEFDVAEHRAKFCAEF-SFQYIECLCSV 259
           E   ++DV + +  +C+   +F+YIE LC V
Sbjct: 353 EKFCDYDVEDEQVFYCSTIGAFEYIESLCCV 383


>ref|XP_006366529.1| PREDICTED: F-box protein At5g07610-like [Solanum tuberosum]
          Length = 403

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
 Frame = +2

Query: 2   SEWFVKYTVDLSSNSYYIGHSFPICTLIRGKKDEDSFLILRTTKG--IIRYNLACGTSEI 175
           SEWFVKY VDL        ++F + +L+RG+++ED+FL+L        +RYN+   T E 
Sbjct: 318 SEWFVKYKVDLEHPHELNYYNFTVLSLVRGRREEDAFLVLAIPGDCKAMRYNIIEKTFEK 377

Query: 176 IDEFDVAEHRAKFCAEFSFQYIECLCSV 259
           + +++ A+ +  F    +F+YIE LC V
Sbjct: 378 LCDYEGADEQVYFLN--AFEYIESLCCV 403


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