BLASTX nr result
ID: Rehmannia22_contig00024448
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00024448
(1427 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme... 545 e-152
ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polyme... 513 e-143
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme... 511 e-142
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 487 e-135
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 483 e-134
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 479 e-133
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 479 e-133
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu... 477 e-132
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 477 e-132
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu... 462 e-127
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 455 e-125
ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps... 451 e-124
gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial ... 446 e-123
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid... 445 e-122
ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabid... 435 e-119
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr... 434 e-119
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme... 427 e-117
ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polyme... 423 e-115
ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Caps... 421 e-115
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme... 419 e-114
>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 911
Score = 545 bits (1403), Expect = e-152
Identities = 276/473 (58%), Positives = 363/473 (76%), Gaps = 1/473 (0%)
Frame = -1
Query: 1418 VVTLDGADEIYRMNDLPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKD 1239
+V+ AD+I R +L M FE++IWN++G+ + E DRS+++DW+ KTH+YYCH+ ++
Sbjct: 187 IVSPQIADDIVRKKNLSMTDFESEIWNAFGKAYYAESDRSKYVDWNCRKTHIYYCHIKQN 246
Query: 1238 GSYYFKGPYLNSSRTHLQRSLGDDNILIVKFSEDGAYATDNIVEEGILVGLRRYRFFVFK 1059
G FKGPYLN++RTHLQR+LGDDN+L+VKF ED + A + IVEEGILVGLRRYRFFV+K
Sbjct: 247 GQCTFKGPYLNTARTHLQRALGDDNVLLVKFVEDTSCA-NMIVEEGILVGLRRYRFFVYK 305
Query: 1058 DERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGKRISEARCRFMHIYN 879
D++++ K M +K AS +KCYFVR +S+ D G+Y+ S KRIS+ARC+FMH++
Sbjct: 306 DDKEKKKSPAMMKKKTAS---LKCYFVRFESIETCNDGGSYVFSTKRISQARCQFMHVHM 362
Query: 878 VSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSIIHDEDGKPILHTDGT 699
VS + KY AR SLILSKTIKL+V+LA T+E IEDI +DENG II DEDG+P +HTDGT
Sbjct: 363 VSNMAKYAARLSLILSKTIKLQVNLASVTIERIEDILCRDENGCIIKDEDGEPRIHTDGT 422
Query: 698 GYISEDLAMKCPKDFSTAKYIRDNSFE-IVNSGDAACQKRGAEARNKEPPLLMQCRLFHG 522
G+ISEDLAM CPKDF A+YI+D ++E V+ D ++R + + N+EPPLLMQCRLF
Sbjct: 423 GFISEDLAMHCPKDFVKAEYIKDENYENFVDIVDLDAERRESVSWNREPPLLMQCRLFFN 482
Query: 521 GYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAISNRPRRNYLSKY 342
G AVKGT LVNRK+ I IRPSM+KVE D + TF+SLEIVAIS+RP + YLSK
Sbjct: 483 GCAVKGTFLVNRKIGSRKIHIRPSMVKVEIDPAISSIPTFDSLEIVAISHRPNKAYLSKN 542
Query: 341 LIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLDFAFVAERMISAGV 162
LI+LLSYGGV +E+F+ LL +ALEET+ VY +RAAL+V N+ +D + RMIS+G+
Sbjct: 543 LISLLSYGGVQKEYFMELLGSALEETKQVYLRKRAALKVVINYREMDDDCLTARMISSGI 602
Query: 161 PLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNNDEVCII 3
PLNEP+L+ LS L + E+TKL+ GK+PIS+SFYLMGTADPTGVL ++EVC+I
Sbjct: 603 PLNEPHLRARLSRLAKIERTKLRGGKLPISDSFYLMGTADPTGVLESNEVCVI 655
>ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 759
Score = 513 bits (1321), Expect = e-143
Identities = 265/475 (55%), Positives = 336/475 (70%), Gaps = 3/475 (0%)
Frame = -1
Query: 1418 VVTLDGADEIYRMNDLPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKD 1239
V+TL +I M PM FE+ IWN YG C+ R Q+LDWDSG+THLY+CHV D
Sbjct: 214 VITLHDVGDILDMIYQPMSHFESYIWNKYGH-LCEHNKRVQYLDWDSGRTHLYHCHVHSD 272
Query: 1238 GSYYFKGPYLNSSRTHLQRSLGDDNILIVKFSEDGAYATDNIVEEGILVGLRRYRFFVFK 1059
SY FKGPYL + RTHLQ SLGD+N+LIVKF ++ + IV+ GILVGLRRYRFFV+K
Sbjct: 273 RSYTFKGPYLKAERTHLQHSLGDENVLIVKFEQNTPGCPEEIVQNGILVGLRRYRFFVYK 332
Query: 1058 DERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGKRISEARCRFMHIYN 879
D+ K+ + +K+ +VKCYFVR++S+ PY ++ YIL K + EARC FMH++
Sbjct: 333 DDGKK----RRLKDKEEKIDSVKCYFVRMESLNPYENE-TYILHDKMVHEARCNFMHVHM 387
Query: 878 VSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSIIHDEDGKPILHTDGT 699
VS++ KY+ARFSLILS T+KL+VDL ++ IEDI D++G II+DEDGKP++HTDGT
Sbjct: 388 VSSMAKYMARFSLILSTTVKLQVDLNSVNIDRIEDIYCHDKSGRIIYDEDGKPLIHTDGT 447
Query: 698 GYISEDLAMKCPKDFSTAKYIRDNSFEIVNS---GDAACQKRGAEARNKEPPLLMQCRLF 528
GYISEDLA KCP+DF K+ N N G+ + + AE ++ EPPLLMQCRLF
Sbjct: 448 GYISEDLARKCPQDFFNVKHKCANLVRYANGVKLGENSSELGEAEFQSGEPPLLMQCRLF 507
Query: 527 HGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAISNRPRRNYLS 348
+ G AVKGTLLVNRKL TIQIRPSMIKVE D ++ + FNSLEI S +PR YLS
Sbjct: 508 YNGLAVKGTLLVNRKLPQRTIQIRPSMIKVEADPRLSRAHMFNSLEINTPSLKPRNTYLS 567
Query: 347 KYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLDFAFVAERMISA 168
+ LIALL+YGGVP E+F ++L N LEET+ +YS+ AL+VA NH D A A MI A
Sbjct: 568 RTLIALLTYGGVPVEYFYDILNNTLEETQRLYSDEVTALKVAVNHRDRDDASTATSMIMA 627
Query: 167 GVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNNDEVCII 3
GVPL EPYL CLS+L + E+ LK G++PI+++FYLMGTADPT LN EVC+I
Sbjct: 628 GVPLTEPYLWCCLSSLAKEERNGLKGGRLPIADTFYLMGTADPTDTLNRHEVCVI 682
>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 1110
Score = 511 bits (1317), Expect = e-142
Identities = 264/475 (55%), Positives = 336/475 (70%), Gaps = 3/475 (0%)
Frame = -1
Query: 1418 VVTLDGADEIYRMNDLPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKD 1239
V+ L +I M PM FE+ IWN YG C+ R Q+LDWDSG+THLY+CHV D
Sbjct: 270 VIMLHDVGDILDMIYQPMSHFESYIWNKYGH-LCEHNKRVQYLDWDSGRTHLYHCHVHSD 328
Query: 1238 GSYYFKGPYLNSSRTHLQRSLGDDNILIVKFSEDGAYATDNIVEEGILVGLRRYRFFVFK 1059
GSY FKGPYL + RTHLQ+SLGD+N+LIVKF ++ + IV+ GILVGLRRYRFFV+K
Sbjct: 329 GSYTFKGPYLKAERTHLQQSLGDENVLIVKFEQNTPGCPEEIVQNGILVGLRRYRFFVYK 388
Query: 1058 DERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGKRISEARCRFMHIYN 879
D+ K+ + +K+ +VKCYFVR++S+ PY + YIL K + EARC FMH++
Sbjct: 389 DDGKK----RSSKDKEEKIDSVKCYFVRMESLNPYEKE-TYILRDKMVHEARCNFMHVHM 443
Query: 878 VSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSIIHDEDGKPILHTDGT 699
VS++ KY+ARFSL LS T+KL+VDL ++ IEDI D++G II+DEDGKP++HTDGT
Sbjct: 444 VSSMAKYMARFSLTLSTTVKLQVDLNSVNIDRIEDICCHDKSGRIIYDEDGKPLIHTDGT 503
Query: 698 GYISEDLAMKCPKDFSTAKYIRDNSFEIVNS---GDAACQKRGAEARNKEPPLLMQCRLF 528
GYISEDLA KCP+DF K+ N N G+ + + AE ++ EPPLLMQCRLF
Sbjct: 504 GYISEDLARKCPQDFFNVKHRCANLERYTNGVKLGENSSELGEAEFQSGEPPLLMQCRLF 563
Query: 527 HGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAISNRPRRNYLS 348
+ G AVKGTLLVNRKL TIQIRPSMIKVE D ++ + + FNSLEI S +PR YLS
Sbjct: 564 YNGLAVKGTLLVNRKLPRRTIQIRPSMIKVEADPRLSRAQMFNSLEINTPSLKPRNTYLS 623
Query: 347 KYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLDFAFVAERMISA 168
+ LIALL+YGGVP E+F ++L N LEET+ +YS+ AL+VA NH D A A MI A
Sbjct: 624 RTLIALLTYGGVPVEYFYDILNNTLEETQRLYSDEVTALKVAVNHRDRDDASTATSMIMA 683
Query: 167 GVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNNDEVCII 3
GVPL EPYL CLS+L + E+ LK G++PI+++FYLMGTADPT LN EVC+I
Sbjct: 684 GVPLTEPYLWCCLSSLAKEERNGLKGGRLPIADTFYLMGTADPTDTLNPHEVCVI 738
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 487 bits (1253), Expect = e-135
Identities = 257/478 (53%), Positives = 336/478 (70%), Gaps = 12/478 (2%)
Frame = -1
Query: 1400 ADEIYRMNDLPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFK 1221
A+EI ++ +LPM VFE ++WN+ G+KF E DR + DWDS KTH+Y+CHV DGSY FK
Sbjct: 131 AEEILKLKNLPMGVFETEVWNNLGRKFIKEEDRQRSFDWDSDKTHIYHCHVSPDGSYRFK 190
Query: 1220 GPYLNSSRTHLQRSLGDDNILIVKFSEDGA------YATDN------IVEEGILVGLRRY 1077
GPYLN +RTHLQR LGD+NIL+VKF+ED +TD+ I EGI VGLR+Y
Sbjct: 191 GPYLNKTRTHLQRVLGDENILLVKFAEDVTDRSSLNCSTDSNASYNKIAREGIFVGLRQY 250
Query: 1076 RFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGKRISEARCR 897
RFFVFKD K E +KK S+VKCYFV ++S LSGK + EARC
Sbjct: 251 RFFVFKDGGK-------EEKKKNPTSSVKCYFVFMESSA---------LSGKTVHEARCI 294
Query: 896 FMHIYNVSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSIIHDEDGKPI 717
FMH + VS++ KY+ARFSLILSKT+KL+VDL+ ++ I+D P +DE+G +++DED KP+
Sbjct: 295 FMHAHMVSSVAKYMARFSLILSKTVKLDVDLSTVNIQRIDDEPGRDEDGHVVYDEDWKPL 354
Query: 716 LHTDGTGYISEDLAMKCPKDFSTAKYIRDNSFEIVNSGDAACQKRGAEARNKEPPLLMQC 537
+ TDGTG+ISEDLA++CP + KY+ N+G++ PLL+QC
Sbjct: 355 ILTDGTGFISEDLALRCPNNLCRGKYM--------NNGNS-------------DPLLIQC 393
Query: 536 RLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAISNRPRRN 357
RLF+ G AVKGTLL+NRKL P TIQIRPSMIKVE D K+ +T NS+EI SN+PRR+
Sbjct: 394 RLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTSNQPRRS 453
Query: 356 YLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLDFAFVAERM 177
YLSKYLIALLSYGGVP E+F+NLL +ALE+ +V S++RAALRV+ +D + V RM
Sbjct: 454 YLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDDSIVT-RM 512
Query: 176 ISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNNDEVCII 3
I +G+P++EP+L CLS + E+ L+ GK+P+++ FYLMGTADPTG L +DEVCII
Sbjct: 513 ILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCII 570
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 483 bits (1243), Expect = e-134
Identities = 256/486 (52%), Positives = 337/486 (69%), Gaps = 20/486 (4%)
Frame = -1
Query: 1400 ADEIYRMNDLPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFK 1221
A+EI ++ +LPM VFE ++WN+ G+KF E DR + DWDS KTH+Y+CHV DGSY FK
Sbjct: 131 AEEILKLKNLPMGVFETEVWNNLGRKFIKEEDRQRSFDWDSDKTHIYHCHVSPDGSYRFK 190
Query: 1220 --------GPYLNSSRTHLQRSLGDDNILIVKFSEDGA------YATDN------IVEEG 1101
GPYLN +RTHLQR LGD+NIL+VKF+ED +TD+ I EG
Sbjct: 191 VCISSSLNGPYLNKTRTHLQRVLGDENILLVKFAEDVTDRSSLNCSTDSNASYNKIAREG 250
Query: 1100 ILVGLRRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGK 921
I VGLR+YRFFVFKD K E +KK S+VKCYFV ++S LSGK
Sbjct: 251 IFVGLRQYRFFVFKDGGK-------EEKKKNPTSSVKCYFVFMESSA---------LSGK 294
Query: 920 RISEARCRFMHIYNVSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSII 741
+ EARC FMH + VS++ KY+ARFSLILSKT+KL+VDL+ ++ I+D P +DE+G ++
Sbjct: 295 TVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDLSTVNIQRIDDEPGRDEDGHVV 354
Query: 740 HDEDGKPILHTDGTGYISEDLAMKCPKDFSTAKYIRDNSFEIVNSGDAACQKRGAEARNK 561
+DED KP++ TDGTG+ISEDLA++CP + KY+ + + ++ +S
Sbjct: 355 YDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYMNNGNSDVCDS--------------- 399
Query: 560 EPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVA 381
PLL+QCRLF+ G AVKGTLL+NRKL P TIQIRPSMIKVE D K+ +T NS+EI
Sbjct: 400 RYPLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEING 459
Query: 380 ISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLD 201
SN+PRR+YLSKYLIALLSYGGVP E+F+NLL +ALE+ +V S++RAALRV+ +D
Sbjct: 460 TSNQPRRSYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMD 519
Query: 200 FAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNN 21
+ V RMI +G+P++EP+L CLS + E+ L+ GK+P+++ FYLMGTADPTG L +
Sbjct: 520 DSIVT-RMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKS 578
Query: 20 DEVCII 3
DEVCII
Sbjct: 579 DEVCII 584
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 479 bits (1234), Expect = e-133
Identities = 257/486 (52%), Positives = 332/486 (68%), Gaps = 20/486 (4%)
Frame = -1
Query: 1400 ADEIYRMNDLPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFK 1221
ADEI M DL M FE+++W G+K + DR L WDSGKTH+Y+CH+ G+ FK
Sbjct: 178 ADEIRGMRDLQMARFESEVWEKLGRKNISQEDRRMSLKWDSGKTHMYHCHISTKGNCTFK 237
Query: 1220 GPYLNSSRTHLQRSLGDDNILIVKFSED-GAYATDN-----------IVEEGILVGLRRY 1077
GPYLN +RTHLQR LGDDNIL+VKF E+ G + + N I EGILVGLR Y
Sbjct: 238 GPYLNQTRTHLQRELGDDNILLVKFDEELGGHRSSNNWNDSYSKYNEIAREGILVGLRCY 297
Query: 1076 RFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGKRISEARCR 897
FFVFKD K KK K S S VKCYFVR++S YILSGK + EAR
Sbjct: 298 HFFVFKDGGKEEKK------KDPSTSPVKCYFVRMESSAFIDMGYQYILSGKTVHEARYM 351
Query: 896 FMHIYNVSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSIIHDEDGKPI 717
FMH+ VS++ Y++R SLILSKT+KLEVD + +E IED P +D++G++++ +DG+ +
Sbjct: 352 FMHVRTVSSVANYMSRLSLILSKTMKLEVDFSRINIERIEDEPCRDKDGNVVY-KDGEAL 410
Query: 716 LHTDGTGYISEDLAMKCPKDFSTAKYIRDNSFEI--------VNSGDAACQKRGAEARNK 561
+HTDGTG+ISEDLA+KCP K D+S E N D A E+
Sbjct: 411 IHTDGTGFISEDLALKCPTYVYKEKCTNDDSTERSIDRKELEANFSDVA----RTESHYG 466
Query: 560 EPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVA 381
EPPLLMQ RLF+ G AVKGTLL+N+KL P TIQIRPSMIKV+ D + +TFNSLE+V
Sbjct: 467 EPPLLMQVRLFYNGTAVKGTLLLNKKLPPQTIQIRPSMIKVKADRDLSDGQTFNSLEVVK 526
Query: 380 ISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLD 201
SN+PR+ YLS+ LIALLSYGGVP+ FFL++L NAL++ R V+SN+R AL+V+ N+ G+D
Sbjct: 527 TSNQPRKTYLSRNLIALLSYGGVPEIFFLDILRNALDDARGVFSNKRNALKVSFNYGGMD 586
Query: 200 FAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNN 21
+ F + RMI +G+ L+EPYLQ LS L + EK L+ GK+P++ES+YLMGT DPTG+L +
Sbjct: 587 YDFTSARMILSGISLDEPYLQHRLSILMKEEKKSLQAGKLPVTESYYLMGTVDPTGILKS 646
Query: 20 DEVCII 3
+EVCII
Sbjct: 647 NEVCII 652
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 479 bits (1234), Expect = e-133
Identities = 257/486 (52%), Positives = 332/486 (68%), Gaps = 20/486 (4%)
Frame = -1
Query: 1400 ADEIYRMNDLPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFK 1221
ADEI M DL M FE+++W G+K + DR L WDSGKTH+Y+CH+ G+ FK
Sbjct: 180 ADEIRGMRDLQMARFESEVWEKLGRKNISQEDRRMSLKWDSGKTHMYHCHISTKGNCTFK 239
Query: 1220 GPYLNSSRTHLQRSLGDDNILIVKFSED-GAYATDN-----------IVEEGILVGLRRY 1077
GPYLN +RTHLQR LGDDNIL+VKF E+ G + + N I EGILVGLR Y
Sbjct: 240 GPYLNQTRTHLQRELGDDNILLVKFDEELGGHRSSNNWNDSYSKYNEIAREGILVGLRCY 299
Query: 1076 RFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGKRISEARCR 897
FFVFKD K KK K S S VKCYFVR++S YILSGK + EAR
Sbjct: 300 HFFVFKDGGKEEKK------KDPSTSPVKCYFVRMESSAFIDMGYQYILSGKTVHEARYM 353
Query: 896 FMHIYNVSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSIIHDEDGKPI 717
FMH+ VS++ Y++R SLILSKT+KLEVD + +E IED P +D++G++++ +DG+ +
Sbjct: 354 FMHVRTVSSVANYMSRLSLILSKTMKLEVDFSRINIERIEDEPCRDKDGNVVY-KDGEAL 412
Query: 716 LHTDGTGYISEDLAMKCPKDFSTAKYIRDNSFEI--------VNSGDAACQKRGAEARNK 561
+HTDGTG+ISEDLA+KCP K D+S E N D A E+
Sbjct: 413 IHTDGTGFISEDLALKCPTYVYKEKCTNDDSTERSIDRKELEANFSDVA----RTESHYG 468
Query: 560 EPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVA 381
EPPLLMQ RLF+ G AVKGTLL+N+KL P TIQIRPSMIKV+ D + +TFNSLE+V
Sbjct: 469 EPPLLMQVRLFYNGTAVKGTLLLNKKLPPQTIQIRPSMIKVKADRDLSDGQTFNSLEVVK 528
Query: 380 ISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLD 201
SN+PR+ YLS+ LIALLSYGGVP+ FFL++L NAL++ R V+SN+R AL+V+ N+ G+D
Sbjct: 529 TSNQPRKTYLSRNLIALLSYGGVPEIFFLDILRNALDDARGVFSNKRNALKVSFNYGGMD 588
Query: 200 FAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNN 21
+ F + RMI +G+ L+EPYLQ LS L + EK L+ GK+P++ES+YLMGT DPTG+L +
Sbjct: 589 YDFTSARMILSGISLDEPYLQHRLSILMKEEKKSLQAGKLPVTESYYLMGTVDPTGILKS 648
Query: 20 DEVCII 3
+EVCII
Sbjct: 649 NEVCII 654
>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334280|gb|ERP58267.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 877
Score = 477 bits (1227), Expect = e-132
Identities = 257/480 (53%), Positives = 336/480 (70%), Gaps = 15/480 (3%)
Frame = -1
Query: 1397 DEIYRMNDLPMKVFEAKIWNSYG--QKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYF 1224
D+I DLPM+ FE+KIW ++G + + E DR ++LDWDSGKTH+Y+CHV DGSY F
Sbjct: 47 DQIRGYKDLPMRTFESKIWEAFGCRRDYIKEEDRVKYLDWDSGKTHIYHCHVDPDGSYRF 106
Query: 1223 KGPYLNSSRTHLQRSLGDDNILIVKFSE------DGAYATDN-------IVEEGILVGLR 1083
KGPYL+ R LQR+LGDDNIL+VKF E G+ + D+ ++ EGI VGLR
Sbjct: 107 KGPYLSKLRNVLQRTLGDDNILMVKFGEVKDDRDSGSRSLDDYFSKYNKVLGEGIHVGLR 166
Query: 1082 RYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGKRISEAR 903
YRFFVFKD K KK K + S VKC+FVR++SV + N ILSGK I +AR
Sbjct: 167 CYRFFVFKDGGKEEKK------KDPTTSPVKCFFVRMESVASIDNQDN-ILSGKTIRQAR 219
Query: 902 CRFMHIYNVSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSIIHDEDGK 723
FMH+ N+S++ Y+ARFSLILSKT+ LEVDL+ ++TI D P +D++G++++ DGK
Sbjct: 220 SVFMHVDNLSSLSNYMARFSLILSKTMNLEVDLSCVDIKTIADEPCRDKDGNVVYGTDGK 279
Query: 722 PILHTDGTGYISEDLAMKCPKDFSTAKYIRDNSFEIVNSGDAACQKRGAEARNKEPPLLM 543
P++HTDGTG+IS DLA+KCPK+ +R ++ E +N + ++ E RN +PPLL+
Sbjct: 280 PLIHTDGTGFISHDLALKCPKNQFKGTCLRASNIERLNVHNEVMEQY-PECRNGDPPLLI 338
Query: 542 QCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAISNRPR 363
Q RLF+ G AVKGT LVN+KL T+ IRPSMIKVE D K+ + NSLEIV S+RP+
Sbjct: 339 QFRLFNNGRAVKGTFLVNKKLTHQTLHIRPSMIKVETDPKLSSTFSKNSLEIVGTSSRPK 398
Query: 362 RNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLDFAFVAE 183
+ +LSK LIALLSYGGVP+EFF+ ++ NALE+ + SN+ AALRVA N+ +D VA
Sbjct: 399 KTFLSKNLIALLSYGGVPEEFFMGIVNNALEDAHGILSNKNAALRVALNYGDMDDNIVA- 457
Query: 182 RMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNNDEVCII 3
MI G+PL EPYLQ LS L + EK LK GKIP+ ES+YLMGTADPTG+L +DEVCII
Sbjct: 458 TMIGCGIPLEEPYLQCRLSILMKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCII 517
>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334279|gb|ERP58266.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 899
Score = 477 bits (1227), Expect = e-132
Identities = 257/480 (53%), Positives = 336/480 (70%), Gaps = 15/480 (3%)
Frame = -1
Query: 1397 DEIYRMNDLPMKVFEAKIWNSYG--QKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYF 1224
D+I DLPM+ FE+KIW ++G + + E DR ++LDWDSGKTH+Y+CHV DGSY F
Sbjct: 69 DQIRGYKDLPMRTFESKIWEAFGCRRDYIKEEDRVKYLDWDSGKTHIYHCHVDPDGSYRF 128
Query: 1223 KGPYLNSSRTHLQRSLGDDNILIVKFSE------DGAYATDN-------IVEEGILVGLR 1083
KGPYL+ R LQR+LGDDNIL+VKF E G+ + D+ ++ EGI VGLR
Sbjct: 129 KGPYLSKLRNVLQRTLGDDNILMVKFGEVKDDRDSGSRSLDDYFSKYNKVLGEGIHVGLR 188
Query: 1082 RYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGKRISEAR 903
YRFFVFKD K KK K + S VKC+FVR++SV + N ILSGK I +AR
Sbjct: 189 CYRFFVFKDGGKEEKK------KDPTTSPVKCFFVRMESVASIDNQDN-ILSGKTIRQAR 241
Query: 902 CRFMHIYNVSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSIIHDEDGK 723
FMH+ N+S++ Y+ARFSLILSKT+ LEVDL+ ++TI D P +D++G++++ DGK
Sbjct: 242 SVFMHVDNLSSLSNYMARFSLILSKTMNLEVDLSCVDIKTIADEPCRDKDGNVVYGTDGK 301
Query: 722 PILHTDGTGYISEDLAMKCPKDFSTAKYIRDNSFEIVNSGDAACQKRGAEARNKEPPLLM 543
P++HTDGTG+IS DLA+KCPK+ +R ++ E +N + ++ E RN +PPLL+
Sbjct: 302 PLIHTDGTGFISHDLALKCPKNQFKGTCLRASNIERLNVHNEVMEQY-PECRNGDPPLLI 360
Query: 542 QCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAISNRPR 363
Q RLF+ G AVKGT LVN+KL T+ IRPSMIKVE D K+ + NSLEIV S+RP+
Sbjct: 361 QFRLFNNGRAVKGTFLVNKKLTHQTLHIRPSMIKVETDPKLSSTFSKNSLEIVGTSSRPK 420
Query: 362 RNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLDFAFVAE 183
+ +LSK LIALLSYGGVP+EFF+ ++ NALE+ + SN+ AALRVA N+ +D VA
Sbjct: 421 KTFLSKNLIALLSYGGVPEEFFMGIVNNALEDAHGILSNKNAALRVALNYGDMDDNIVA- 479
Query: 182 RMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNNDEVCII 3
MI G+PL EPYLQ LS L + EK LK GKIP+ ES+YLMGTADPTG+L +DEVCII
Sbjct: 480 TMIGCGIPLEEPYLQCRLSILMKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCII 539
>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
gi|550336519|gb|ERP59562.1| hypothetical protein
POPTR_0006s17780g [Populus trichocarpa]
Length = 866
Score = 462 bits (1190), Expect = e-127
Identities = 251/481 (52%), Positives = 331/481 (68%), Gaps = 15/481 (3%)
Frame = -1
Query: 1400 ADEIYRMNDLPMKVFEAKIWNSYG--QKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYY 1227
AD+I DLPM+ FE+KIW+++G + + E DR ++LDWDSGK H+Y+CHV DGSY
Sbjct: 46 ADQIRGYKDLPMETFESKIWDAFGCRRDYIKEEDRVKYLDWDSGKAHIYHCHVDPDGSYR 105
Query: 1226 FKGPYLNSSRTHLQRSLGDDNILIVKFSE------------DGAYATDN-IVEEGILVGL 1086
FKGPYL+ R LQR+LGDDNIL+VKF E D +A N ++ EGI VGL
Sbjct: 106 FKGPYLSKQRNVLQRTLGDDNILMVKFEEVKDERYSVSSSLDNYFAKYNKVLREGIHVGL 165
Query: 1085 RRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGKRISEA 906
R YRFFVFKD K KK K + S VKC+FV ++SV + N IL GK I +A
Sbjct: 166 RCYRFFVFKDGGKEEKK------KDPTTSPVKCFFVCMESVASVDNQDN-ILCGKTIRQA 218
Query: 905 RCRFMHIYNVSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSIIHDEDG 726
R FMH+ N+S++ Y+ARFSLILSKT+ LEVDL+ ++ I D P +D++G+ ++ DG
Sbjct: 219 RSVFMHVDNLSSLSNYMARFSLILSKTMNLEVDLSFVDIKPIADEPCRDKDGNAVYGTDG 278
Query: 725 KPILHTDGTGYISEDLAMKCPKDFSTAKYIRDNSFEIVNSGDAACQKRGAEARNKEPPLL 546
KP++HTDGTG+IS DLA+KCPK+ ++ ++ E + + ++ E + +PPLL
Sbjct: 279 KPLIHTDGTGFISHDLALKCPKNQVKGTCLQASNIERLRVHNEVMEQN-PECLHGDPPLL 337
Query: 545 MQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAISNRP 366
+Q RLF+ G AVKGT LVN+KL T+ +RPSMIKVE D K+ + NSLEIV S RP
Sbjct: 338 IQFRLFNNGRAVKGTFLVNKKLNHRTLHVRPSMIKVETDPKLSNTFSKNSLEIVGTSCRP 397
Query: 365 RRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLDFAFVA 186
++ +LSK LIALLSYGGVP+EFF+ +L NALE+ + SN++AALRVA N+ +D VA
Sbjct: 398 KKTFLSKNLIALLSYGGVPEEFFMGILNNALEDAHGILSNKKAALRVALNYGDMDDNIVA 457
Query: 185 ERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNNDEVCI 6
MI G+PL EPYLQ LS L++ EK LK GKIP+ ES+YLMGTADPTG+L +DEVCI
Sbjct: 458 -TMIGCGIPLEEPYLQHHLSILKKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCI 516
Query: 5 I 3
I
Sbjct: 517 I 517
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 455 bits (1170), Expect = e-125
Identities = 238/485 (49%), Positives = 318/485 (65%), Gaps = 10/485 (2%)
Frame = -1
Query: 1427 LGAVVTLDGADEIYRMNDLPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHV 1248
LG V T ADEI DLPM +EA +W+ G+++C + DR + L WDSGKTH Y CHV
Sbjct: 164 LGQVTT---ADEIRLWKDLPMVAYEAAVWDRLGRRYCPQTDR-RMLQWDSGKTHYYQCHV 219
Query: 1247 CKDGSYYFKGPYLNSSRTHLQRSLGDDNILIVKFSE----DGAYATDN------IVEEGI 1098
DGSY FKGP L + THL + LGD+N+L VKF++ Y+ D I + GI
Sbjct: 220 APDGSYTFKGPLLEHTGTHLHKVLGDENVLTVKFADVPKNSSTYSNDRYFTYKEIAKNGI 279
Query: 1097 LVGLRRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGKR 918
++GLRRY+FFVFKD K KK + +K VKCYF+R DS + YI +GK
Sbjct: 280 MIGLRRYQFFVFKDGGKEEKKKDLSTKK------VKCYFIRTDSTASCDMENPYIFTGKS 333
Query: 917 ISEARCRFMHIYNVSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSIIH 738
I EAR FMH++ T+ Y+ARFSLILSKT LEVD+ T + I+DI D++G +
Sbjct: 334 IHEARMHFMHVHRAPTLANYMARFSLILSKTKTLEVDMTGITFDPIDDIHCHDQDGKDVL 393
Query: 737 DEDGKPILHTDGTGYISEDLAMKCPKDFSTAKYIRDNSFEIVNSGDAACQKRGAEARNKE 558
D++ KP +H+DGTGYISEDLA CP + K +R + + EA N++
Sbjct: 394 DKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSENIQ--------------EACNQD 439
Query: 557 PPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAI 378
PPLL+Q R+F+ GYAVKGT L+N+KL P T+Q+RPSMIKV +D + TFN+LE+V
Sbjct: 440 PPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTT 499
Query: 377 SNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLDF 198
SN PRR LSK L+ALLSYGG+P EFFL++L+N LEE+++++ N+ AAL VA N+ +D
Sbjct: 500 SNPPRRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKHAALNVALNYGEMDD 559
Query: 197 AFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNND 18
A+ MI G+PL+EP+L+ LS L + EK LK G++P++ES+YLMGT DPTG L D
Sbjct: 560 QNAAQ-MILVGIPLDEPHLKNHLSILLKTEKNDLKAGRLPVTESYYLMGTVDPTGELKED 618
Query: 17 EVCII 3
EVC+I
Sbjct: 619 EVCVI 623
>ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella]
gi|482565615|gb|EOA29804.1| hypothetical protein
CARUB_v10012898mg [Capsella rubella]
Length = 982
Score = 451 bits (1159), Expect = e-124
Identities = 241/485 (49%), Positives = 319/485 (65%), Gaps = 10/485 (2%)
Frame = -1
Query: 1427 LGAVVTLDGADEIYRMNDLPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHV 1248
LG VVT A+EI R DLPM +EA +W+S G+KFC + D + L WDSGKTH Y CHV
Sbjct: 168 LGEVVT---AEEIRRWKDLPMVAYEAAVWDSLGRKFCPQTDE-RVLQWDSGKTHYYQCHV 223
Query: 1247 CKDGSYYFKGPYLNSSRTHLQRSLGDDNILIVKFSE----------DGAYATDNIVEEGI 1098
DGSY FKGP L S+ THL + LGD+N+L VKF+ D + I + GI
Sbjct: 224 APDGSYTFKGPLLESTGTHLHKVLGDENVLTVKFANVQKNSSTYCSDSYFTYKGIAKNGI 283
Query: 1097 LVGLRRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGKR 918
+VGLRRY+FFVFKD K KNK + K+A KCYF+R DS + YI SGK
Sbjct: 284 MVGLRRYKFFVFKDGGKD-DKNKDVSTKRA-----KCYFIRTDSTASIDMEKPYIFSGKS 337
Query: 917 ISEARCRFMHIYNVSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSIIH 738
I EAR FMH++ + ++ Y+ARFSLILSKT KLEVDL E I+DIP D++G +
Sbjct: 338 IHEARMHFMHVHTLPSLANYMARFSLILSKTKKLEVDLTGVNFEIIKDIPCHDQDGKDVL 397
Query: 737 DEDGKPILHTDGTGYISEDLAMKCPKDFSTAKYIRDNSFEIVNSGDAACQKRGAEARNKE 558
D++ KP +H+DGTGYISEDLA CP + K +R + + EA +E
Sbjct: 398 DKNKKPRIHSDGTGYISEDLAQMCPVNIYKGKCLRSDKIK--------------EACGQE 443
Query: 557 PPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAI 378
PPLL+Q R+F+ GYA+KGT L+N+K+ T+Q+RPSMIKV D +P TFN+LE+V
Sbjct: 444 PPLLIQFRMFYNGYAIKGTFLLNKKIPSRTVQVRPSMIKVLPD-SLPNISTFNTLEVVNT 502
Query: 377 SNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLDF 198
S P+R LS+ L+ALLSYGG+P EFFL++L N LEE++ ++ N+RAAL A ++ +D
Sbjct: 503 SFPPKRTKLSRNLVALLSYGGIPDEFFLDILHNTLEESKAIFYNKRAALNAALSYGEMDD 562
Query: 197 AFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNND 18
A+ MI AG+PL+EP+L+ CLS+ + EK LK G++P++ES+YLMGT DPTG L D
Sbjct: 563 QNAAQ-MILAGIPLDEPHLKTCLSSFLKREKNDLKAGRLPVTESYYLMGTVDPTGELKED 621
Query: 17 EVCII 3
EVC+I
Sbjct: 622 EVCVI 626
>gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial [Phaseolus vulgaris]
Length = 689
Score = 446 bits (1148), Expect = e-123
Identities = 250/485 (51%), Positives = 320/485 (65%), Gaps = 19/485 (3%)
Frame = -1
Query: 1400 ADEIYRMNDLPMKVFEAKIWNSYGQKFC-DEWDRSQFLDWDSGKTHLYYCHVCKDGSYYF 1224
AD I + DLPM FE IW ++G+ + DR ++DWDSG+TH+Y C+V DGS F
Sbjct: 138 ADCIRSLKDLPMATFEKTIWEAFGKDHIYSQSDRQVYVDWDSGRTHVYQCYVSSDGSLRF 197
Query: 1223 KGPYLNSSRTHLQRSLGDDNILIVKFSEDG-----------AYAT-DNIVEEGILVGLRR 1080
KGP L S++THLQRSLGDDN+L+VKF+E+G AY +EGI VGLR
Sbjct: 198 KGPILQSTQTHLQRSLGDDNVLLVKFAENGIANNIRTSAEEAYRLYGKFGKEGINVGLRL 257
Query: 1079 YRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGKRISEARC 900
YRFFVFKD K KK K + S+VKCYFVR+ S NYILS K +SEAR
Sbjct: 258 YRFFVFKDGGKEEKK------KDPTSSSVKCYFVRMQSCWSIDGSANYILSNKTVSEARG 311
Query: 899 RFMHIYNVSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSIIHDEDGKP 720
FMH + + +++KY+ARFSLILSKT KL +DLA V+TI+D+ QDENG+II+D + KP
Sbjct: 312 LFMHAHLLPSLDKYMARFSLILSKTFKLNIDLATVNVQTIQDVYCQDENGNIIYDNE-KP 370
Query: 719 ILHTDGTGYISEDLAMKCPKDFSTAKYIRDNSFEIVNS---GDAACQKRG---AEARNKE 558
+ TDGTG+IS DLA+ CP + +N + +N+ + C++ G + +
Sbjct: 371 RILTDGTGFISGDLALLCPNSVCKGNNLENNYIQEINNLLELEDMCKEMGETELKLTTHQ 430
Query: 557 PPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAI 378
PPLL+QCRLFH G A+KGTLLVN+KL P TI +RPSMIKVE D + ++ NSLEIV
Sbjct: 431 PPLLIQCRLFHMGSAIKGTLLVNKKLPPRTIHVRPSMIKVETDLSL-NMQSINSLEIVNT 489
Query: 377 SNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLDF 198
S +P R YLSK LIALLSYGGVP EFF +LL + LEE +V+SN+R ALR + NH +D
Sbjct: 490 SIKPNRTYLSKNLIALLSYGGVPNEFFKSLLESNLEEANHVFSNKRVALRASVNHGNMD- 548
Query: 197 AFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNND 18
+ A MI G+P +EP+LQ LS L R EK KL+ GK+ I + FYLMGT DPTG L
Sbjct: 549 EYNAAGMILCGIPQDEPFLQYRLSILAREEKKKLRGGKLYIPDCFYLMGTVDPTGCLEKG 608
Query: 17 EVCII 3
+VCII
Sbjct: 609 QVCII 613
>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
polymerase 5 [Arabidopsis thaliana]
Length = 977
Score = 445 bits (1145), Expect = e-122
Identities = 238/491 (48%), Positives = 319/491 (64%), Gaps = 16/491 (3%)
Frame = -1
Query: 1427 LGAVVTLDGADEIYRMNDLPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHV 1248
+G V+T ADEI DLPM +EA +W+ G+ +C + DR + L WDSGKTH Y C+V
Sbjct: 154 VGQVIT---ADEIRLWKDLPMVEYEAAVWDRLGRHYCPQKDR-RMLQWDSGKTHYYQCNV 209
Query: 1247 CKDGSYYFK------GPYLNSSRTHLQRSLGDDNILIVKFSE----DGAYATDN------ 1116
+GSY FK GP L + THL + LGDDN+L VKF++ Y+ D+
Sbjct: 210 APNGSYTFKVLSALQGPLLEHTGTHLHKVLGDDNVLTVKFADVQKSSSTYSIDHYFTYKG 269
Query: 1115 IVEEGILVGLRRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNY 936
I + GI++GLRRY+FFVFKD K KK + +K VKCYF+R DS Y Y
Sbjct: 270 IAKNGIMIGLRRYQFFVFKDGGKEEKKKDLSTKK------VKCYFIRTDSTAFYDMQNPY 323
Query: 935 ILSGKRISEARCRFMHIYNVSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDE 756
IL+GK I EAR FMH++ T+ Y+ARFSLILSKT LEVD+ T + I+DI D+
Sbjct: 324 ILTGKSIYEARMHFMHVHRAPTLANYMARFSLILSKTKTLEVDMTGITFDQIDDIHCHDQ 383
Query: 755 NGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSTAKYIRDNSFEIVNSGDAACQKRGA 576
+G + D++ KP +H+DGTGYISEDLA CP + K +R S +
Sbjct: 384 DGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQ-------------- 429
Query: 575 EARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNS 396
EA ++PPLL+Q R+F+ GYAVKGT L+N+KL P T+Q+RPSMIKV +D + TFN+
Sbjct: 430 EACYQDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNA 489
Query: 395 LEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASN 216
LE+V SN P+R LSK L+ALLSYGG+P EFFL++L+N LEE+++++ N+RAAL A N
Sbjct: 490 LEVVTTSNPPKRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALN 549
Query: 215 HDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPT 36
+ +D A+ MI G+PL+EP+L+ LS L + EK LK GK+P++ES+YLMGT DPT
Sbjct: 550 YGEMDDQNAAQ-MILVGIPLDEPHLKNYLSILLKTEKNDLKAGKLPVTESYYLMGTVDPT 608
Query: 35 GVLNNDEVCII 3
G L DEVC+I
Sbjct: 609 GALKEDEVCVI 619
>ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana]
gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 3;
Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
3 gi|330251848|gb|AEC06942.1| probable RNA-dependent RNA
polymerase 3 [Arabidopsis thaliana]
Length = 992
Score = 435 bits (1119), Expect = e-119
Identities = 231/477 (48%), Positives = 305/477 (63%), Gaps = 12/477 (2%)
Frame = -1
Query: 1397 DEIYRMNDLPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKG 1218
D+I + DLPM +EA +WN GQ++C +R + L+ DSG TH Y CHV DGSY FKG
Sbjct: 171 DQIRKWKDLPMVSYEAAVWNRLGQRYCSPKERRRPLEGDSGMTHYYQCHVATDGSYKFKG 230
Query: 1217 PYLNSSRTHLQRSLGDDNILIVKFSE--------DGAYAT-DNIVEEGILVGLRRYRFFV 1065
L ++ THL + LGDDN+L VKF + + Y+T I + GI+VGLRRYRFFV
Sbjct: 231 HLLENTGTHLHKVLGDDNVLTVKFDKVLGVETYCNDLYSTYKGIAKNGIMVGLRRYRFFV 290
Query: 1064 FKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGKRISEARCRFMHI 885
FKD K KK K S VKCYF+R DS YI +GK + EAR FMH+
Sbjct: 291 FKDGGKEEKK------KDVSTKGVKCYFIRTDSTASIDMQNPYIFAGKSMHEARMHFMHV 344
Query: 884 YNVSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSIIHDEDGKPILHTD 705
+S++ Y++RFSLILSKT LEVD+ T E I+DI D++ + D++GKP +H+D
Sbjct: 345 NTLSSLPNYMSRFSLILSKTKTLEVDMTGITFEQIDDIHCHDQDDKDVLDKNGKPCIHSD 404
Query: 704 GTGYISEDLAMKCPKDFSTAKYIRDNSFEIVN---SGDAACQKRGAEARNKEPPLLMQCR 534
GTGYISEDLA CP + K +R N+ + N G C +EPPLL+Q R
Sbjct: 405 GTGYISEDLARMCPVNIFKGKSMRSNNIQSKNLNFEGQGPC--------GQEPPLLIQFR 456
Query: 533 LFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAISNRPRRNY 354
+F+ GYAVKGT L N+KL P T+Q+RPSMIKV D + TFNSLE+V SN PR+
Sbjct: 457 IFYNGYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTTSNPPRKAR 516
Query: 353 LSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLDFAFVAERMI 174
LS+ L+ALLSYGGVP +FFLN+L N LEE++ ++ + RAA + A N+ D + A+ MI
Sbjct: 517 LSRNLVALLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYG--DDQYTAD-MI 573
Query: 173 SAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNNDEVCII 3
G+PL+EPYL+ LS L + E+ LK G+ PI ES+Y+MGT DPTG L +E+C+I
Sbjct: 574 LVGIPLDEPYLKDRLSYLLKTERNALKAGRFPIDESYYIMGTVDPTGELKENEICVI 630
>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
gi|557110064|gb|ESQ50361.1| hypothetical protein
EUTSA_v10001897mg [Eutrema salsugineum]
Length = 988
Score = 434 bits (1115), Expect = e-119
Identities = 229/476 (48%), Positives = 308/476 (64%), Gaps = 10/476 (2%)
Frame = -1
Query: 1400 ADEIYRMNDLPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFK 1221
ADEI + DLPM +EA +W+ + + L+WDS KTH Y CHV DGSY FK
Sbjct: 177 ADEIRQWKDLPMVAYEAAVWDRLSRLELSQTVERVSLEWDSEKTHYYQCHVASDGSYTFK 236
Query: 1220 GPYLNSSRTHLQRSLGDDNILIVKFSE----DGAYATDN------IVEEGILVGLRRYRF 1071
GP L + THL + LGD+N+L VKF++ Y+ D I + GI+VGLRRY+F
Sbjct: 237 GPLLEPTGTHLHKVLGDENVLTVKFADVQKNSSTYSNDRYSAYKRIAKNGIMVGLRRYQF 296
Query: 1070 FVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGKRISEARCRFM 891
FVFKD K KK K S + VKCYF+R DS YI SGK I+EAR FM
Sbjct: 297 FVFKDVGKAEKK------KDFSTNGVKCYFIRTDSTAANDMGKAYIFSGKTINEARMHFM 350
Query: 890 HIYNVSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSIIHDEDGKPILH 711
H++ + ++ KY+ARFSLILSKT KLEVD+ T + I++I D+N +++ D++ +P +H
Sbjct: 351 HVHTLPSLAKYMARFSLILSKTKKLEVDMTGITYQEIKEIHCHDQNNNVVLDKNKEPRMH 410
Query: 710 TDGTGYISEDLAMKCPKDFSTAKYIRDNSFEIVNSGDAACQKRGAEARNKEPPLLMQCRL 531
+DGTGYISEDLA CP + + G +K E+ ++PPLL+Q R+
Sbjct: 411 SDGTGYISEDLARMCPVN--------------IFKGKCLSKKNIQESCGQDPPLLIQFRM 456
Query: 530 FHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAISNRPRRNYL 351
F+ G AVKGT L+N+KL T+Q+RPSMIKV +D + TFNSLE+V SN P+R L
Sbjct: 457 FYDGNAVKGTFLLNKKLPDRTVQVRPSMIKVSKDRALSNFSTFNSLEVVTTSNPPKRTKL 516
Query: 350 SKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLDFAFVAERMIS 171
S+ L+ALLSYGGVP EFFL+LL+N +EET+ +++N+RAAL+ A NH +D A+ MI
Sbjct: 517 SRNLVALLSYGGVPNEFFLDLLLNTMEETKTIFNNKRAALKAALNHGDMDDQNAAQ-MIL 575
Query: 170 AGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNNDEVCII 3
G+PL+EP+L+ LS L EK LK G++P++ES+YLMGT DPTG L DEVC+I
Sbjct: 576 VGIPLDEPHLKDRLSILSNIEKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVI 631
>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
Length = 988
Score = 427 bits (1098), Expect = e-117
Identities = 236/483 (48%), Positives = 316/483 (65%), Gaps = 19/483 (3%)
Frame = -1
Query: 1394 EIYRMNDLPMKVFEAKIWNSYGQK-FCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKG 1218
+I + DLPM FE IW +G+K D+ DR DW+SG+TH+Y C V DG+ FKG
Sbjct: 154 KIRSLKDLPMAKFEKTIWEDFGEKCIYDQSDRQLHRDWNSGRTHVYQCFVFPDGNLRFKG 213
Query: 1217 PYLNSSRTHLQRSLGDDNILIVKFSEDGA------YATD------NIVEEGILVGLRRYR 1074
P L S+RTHLQ++LGDDN+L+VKF+EDG+ +A + +EGI VGLR YR
Sbjct: 214 PILQSTRTHLQKTLGDDNVLLVKFAEDGSGKNFRTHAEEANALYGKFGKEGIRVGLRLYR 273
Query: 1073 FFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGKRISEARCRF 894
FFVFKD E +K + S VKCYFVR+ S + +YILS K +SEAR F
Sbjct: 274 FFVFKD------GGNEEKQKDPTSSTVKCYFVRMQSGCSADEGADYILSNKTVSEARTLF 327
Query: 893 MHIYN-VSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSIIHDEDGKPI 717
MH + + + KY+ARFSLILSKT+KL +DL +V+ I D +D NG+I+ D + KP
Sbjct: 328 MHAHMLLPNLNKYMARFSLILSKTLKLNIDLTTVSVQKIPDEYCKDANGNIMVDNE-KPR 386
Query: 716 LHTDGTGYISEDLAMKCPKDFSTAKYIRDNSFEIVNS-----GDAACQKRGAEARNKEPP 552
+ TDGTG+IS DLA+ CP + + +N + +N+ + + EPP
Sbjct: 387 ILTDGTGFISRDLALLCPNNVYKGSNLENNCIQEINNLVELEDMSNAMGEAEQLSTHEPP 446
Query: 551 LLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAISN 372
LL+QCRLFH G+A+KGTLLVNRKL P TIQ+RPSMIKVE+D V ++ NSLE+V SN
Sbjct: 447 LLIQCRLFHMGHAIKGTLLVNRKLPPRTIQVRPSMIKVEKDPSV-HMQSINSLEVVTTSN 505
Query: 371 RPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLDFAF 192
+P+R YLSK+LIALLS+GGVP EFF++LL + +E+ +VYSN+R+ALR + N D +
Sbjct: 506 KPKRGYLSKHLIALLSFGGVPNEFFMDLLRSNMEDANHVYSNKRSALRASINCGEKD-EY 564
Query: 191 VAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNNDEV 12
A MI G+PL+EP+L+ LS R EK KL+ GK+ + + FYLMGT DPTG L ++V
Sbjct: 565 NAAEMILCGIPLDEPFLKHHLSRFAREEKKKLRGGKLYMPDCFYLMGTVDPTGHLKKNQV 624
Query: 11 CII 3
CII
Sbjct: 625 CII 627
>ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Fragaria
vesca subsp. vesca]
Length = 1405
Score = 423 bits (1087), Expect = e-115
Identities = 235/478 (49%), Positives = 308/478 (64%), Gaps = 14/478 (2%)
Frame = -1
Query: 1400 ADEIYRMNDLPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFK 1221
A+ I DLPM +FE+ +W G+K DR + DWDSG TH+Y+C+V DGSY FK
Sbjct: 577 AEAIRHWKDLPMVMFESTVWEHLGRKCISTEDRRLYFDWDSGSTHVYHCYVNVDGSYRFK 636
Query: 1220 GPYLNS-SRTHLQRSLGDDNILIVKFSED-------GA---YATD-NIVEEGILVGLRRY 1077
GPYL RT LQ+ LGDDN+L+VKF+++ GA Y T + EGILVGLRRY
Sbjct: 637 GPYLYKIRRTLLQKELGDDNVLMVKFAKEEVQRGQSGACHNYPTYMKVAREGILVGLRRY 696
Query: 1076 RFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGKRISEARCR 897
RFFVFKD KK K + S VKCYFVR+ S Y LS + EARC
Sbjct: 697 RFFVFKDGGNEEKK------KNPTSSPVKCYFVRVASDAAIDKGVYYRLSHMTMYEARCL 750
Query: 896 FMHIYNVSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSIIHDEDGKPI 717
FMH + +++I+ Y+ARFSLILSKT+ L+ D + VE I++ DE+G+ I+ D KP+
Sbjct: 751 FMHAHTLASIDNYMARFSLILSKTMSLKADWSLVKVEIIDEEYCLDESGNCIY-RDEKPL 809
Query: 716 LHTDGTGYISEDLAMKCPKDFSTAKYIRDNSFEIVNSGDAACQ--KRGAEARNKEPPLLM 543
+HTDGTG+ISEDLA+ CPK + ++I D + + D K A R +EPPLL+
Sbjct: 810 IHTDGTGFISEDLALLCPKIEAKGQWISDEHMKGLPDPDELDDTGKNRAGLRTEEPPLLI 869
Query: 542 QCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAISNRPR 363
QCRLFH G A KGTLLVN+KL+P IQIRPSM+KV+ D + +T NSLEIV S PR
Sbjct: 870 QCRLFHNGSASKGTLLVNKKLQPNRIQIRPSMLKVKTDPVISNNQTLNSLEIVGTSTPPR 929
Query: 362 RNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLDFAFVAE 183
+LS+ LIALL +GGVP+EFF+ +L ALE++ V+ +RAAL+VA + +D F+
Sbjct: 930 NTHLSRILIALLVHGGVPEEFFMQILNKALEDSHGVFCKKRAALKVAEKYGEMDDNFLGR 989
Query: 182 RMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNNDEVC 9
MIS G+PL E YL+ LS L + E L++G++ I +S+ LMGTADPTG L DEVC
Sbjct: 990 LMISFGIPLEESYLRYRLSVLMKEENNSLRKGRLYIPDSYNLMGTADPTGTLKEDEVC 1047
>ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Capsella rubella]
gi|482565607|gb|EOA29796.1| hypothetical protein
CARUB_v10012890mg [Capsella rubella]
Length = 998
Score = 421 bits (1083), Expect = e-115
Identities = 231/489 (47%), Positives = 309/489 (63%), Gaps = 15/489 (3%)
Frame = -1
Query: 1424 GAVVTLDGADEIYRMNDLPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVC 1245
G + + D+I + DLPM +EA++W G+++C + +R + L+ DS KTH Y CHV
Sbjct: 169 GKPLEVISGDDIRQWKDLPMVSYEAEVWFQLGERYCSKKERRRSLEGDSEKTHYYQCHVA 228
Query: 1244 KDGSYYFK------GPYLNSSRTHLQRSLGDDNILIVKFSE--------DGAYAT-DNIV 1110
DGSY FK G L ++ THL + LGDDN+L VKF + + Y+T + I
Sbjct: 229 TDGSYKFKVGSPNSGHLLENTGTHLHKVLGDDNVLTVKFDDMSCTETNCNNLYSTYEGIA 288
Query: 1109 EEGILVGLRRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYIL 930
+ GI+VGLRRY+FFVFKD K KK K S VKCYF+R S + YIL
Sbjct: 289 KNGIMVGLRRYQFFVFKDGGKEGKK------KDFSRQGVKCYFIRTGSTALSDMENPYIL 342
Query: 929 SGKRISEARCRFMHIYNVSTIEKYIARFSLILSKTIKLEVDLADATVETIEDIPFQDENG 750
G I EAR FMH+YN+ + Y+ARFSLILSKT KLE+D+ T E I+DI D++
Sbjct: 343 DGMSIHEARMHFMHVYNLPSPANYMARFSLILSKTKKLEMDMTGITFEKIDDIHCHDQDN 402
Query: 749 SIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSTAKYIRDNSFEIVNSGDAACQKRGAEA 570
+ D++GKP +H+DGTGYISEDLA CP + K IR N+ + C
Sbjct: 403 HDVLDKNGKPCIHSDGTGYISEDLARMCPINIFKGKSIRSNNIK------GTC------- 449
Query: 569 RNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLE 390
++PPLL+Q R+F+ GYAVKGT L N+KL P T+Q+RPSMIKV D+ + TFNSLE
Sbjct: 450 -GEDPPLLIQFRMFYKGYAVKGTFLSNKKLPPQTVQVRPSMIKVYEDQALLNFSTFNSLE 508
Query: 389 IVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHD 210
+V SN P+ LS+ LIALLSYGGVP +FFLN+L LEE++ ++ + RAA++ A N+
Sbjct: 509 VVNTSNPPKMTRLSRNLIALLSYGGVPNDFFLNILRKTLEESKTIFYSERAAIKAAINYG 568
Query: 209 GLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGV 30
+D AE MI +PL+EP+L+ LS L + EK LKEG++PI ES+YLMGT DPTG
Sbjct: 569 DMDDQNTAE-MILVDIPLDEPHLKDRLSILLKTEKNALKEGRLPIGESYYLMGTVDPTGE 627
Query: 29 LNNDEVCII 3
L +EVC+I
Sbjct: 628 LKENEVCVI 636
>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
sativus]
Length = 1056
Score = 419 bits (1076), Expect = e-114
Identities = 232/454 (51%), Positives = 307/454 (67%), Gaps = 22/454 (4%)
Frame = -1
Query: 1298 QFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIVKFSEDGA---- 1131
Q++DWD KTH+Y+CHV DGS FKGP+LN+++THLQR LGDDN+L+VKF+ED +
Sbjct: 255 QYVDWDRRKTHIYHCHVALDGSCRFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPL 314
Query: 1130 --------YATDNIVEEGILVGLRRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVR 975
YA I +GIL+GLRRY FFVFKD K KK K + SAVKCYFVR
Sbjct: 315 SNHSGGSFYAYSKIARDGILLGLRRYHFFVFKDGGKEEKK------KNPTTSAVKCYFVR 368
Query: 974 IDSVVPYGDDGNYILSGKRISEARCRFMHIYNVSTIEKYIARFSLILSKTIKLEVDLADA 795
++S Y LS + + EAR FMH + VS+I Y+ARFSLILSKTI L++DL+
Sbjct: 369 MESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTINLKIDLSTV 428
Query: 794 TVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDF--STAKYIRD--- 630
V+ I DIP +D G++I+ DGKP++HTDGTG+ISEDLA++CP + AK+ D
Sbjct: 429 NVQRIGDIPCKDIYGNVIY-RDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDADLKA 487
Query: 629 -----NSFEIVNSGDAACQKRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTI 465
+FE + G E R EPPLL+Q RLF+ G AVKGT L+N++L P TI
Sbjct: 488 IWQRIPAFEGFQNKTLQLTLPGLELR--EPPLLIQFRLFYNGLAVKGTFLLNKQLPPRTI 545
Query: 464 QIRPSMIKVERDEKVPKEETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLL 285
QIR SMIKVE D + ET NSLE+V SN P+R +LS+ LIALL+YGGVP+E+F+N+L
Sbjct: 546 QIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGGVPREYFMNIL 605
Query: 284 MNALEETRNVYSNRRAALRVASNHDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEK 105
++AL++ + V+S++RAALRV+ N+ +D F+ RMI AG+PL+E YLQ LS L + EK
Sbjct: 606 VDALKDVQGVFSSKRAALRVSINNGEMD-DFLVARMILAGIPLDESYLQYRLSVLLKEEK 664
Query: 104 TKLKEGKIPISESFYLMGTADPTGVLNNDEVCII 3
LK G++ + E +YLMGT DPT L + EVC+I
Sbjct: 665 KSLKSGRLHVPECYYLMGTVDPTFTLESGEVCVI 698