BLASTX nr result

ID: Rehmannia22_contig00024294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00024294
         (1934 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi...   699   0.0  
gb|AGZ20103.1| pentatricopeptide repeat-containing protein [Came...   682   0.0  
ref|XP_006339632.1| PREDICTED: pentatricopeptide repeat-containi...   674   0.0  
ref|XP_004231193.1| PREDICTED: pentatricopeptide repeat-containi...   674   0.0  
gb|EOX95861.1| Pentatricopeptide repeat superfamily protein, put...   644   0.0  
gb|EXB51620.1| hypothetical protein L484_012912 [Morus notabilis]     629   e-177
ref|XP_002320827.2| pentatricopeptide repeat-containing family p...   605   e-170
ref|XP_006491189.1| PREDICTED: pentatricopeptide repeat-containi...   603   e-170
ref|XP_004301483.1| PREDICTED: pentatricopeptide repeat-containi...   576   e-161
gb|ESW32485.1| hypothetical protein PHAVU_002G326200g [Phaseolus...   567   e-159
ref|XP_004300812.1| PREDICTED: pentatricopeptide repeat-containi...   565   e-158
ref|XP_004308336.1| PREDICTED: pentatricopeptide repeat-containi...   561   e-157
gb|EMJ21398.1| hypothetical protein PRUPE_ppa003068mg [Prunus pe...   554   e-155
ref|XP_004503311.1| PREDICTED: pentatricopeptide repeat-containi...   536   e-149
ref|XP_004503310.1| PREDICTED: pentatricopeptide repeat-containi...   536   e-149
ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containi...   535   e-149
ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containi...   534   e-149
ref|NP_191711.1| pentatricopeptide repeat-containing protein [Ar...   514   e-143
ref|NP_198189.1| pentatricopeptide repeat-containing protein [Ar...   509   e-141
ref|NP_680234.1| pentatricopeptide repeat-containing protein [Ar...   509   e-141

>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial [Vitis vinifera]
            gi|297745328|emb|CBI40408.3| unnamed protein product
            [Vitis vinifera]
          Length = 765

 Score =  699 bits (1805), Expect = 0.0
 Identities = 367/654 (56%), Positives = 465/654 (71%), Gaps = 16/654 (2%)
 Frame = +3

Query: 21   ICSGEPSMRRLIKPFKPPRAASAATLRHFSADPQ-------PSPDLSTPVSQTLSLLQIT 179
            + S +  + R ++P  PP  +S   LRH SA+P        P  D S+ V+  + LLQ T
Sbjct: 7    VSSKQSKLLRFLRPQTPPNLSSL--LRHLSAEPDHHPPAPPPQNDSSSVVNLVVELLQTT 64

Query: 180  DPSSWPTNXXXXXXXXXXXXXXXX----KITRQLPNCQNALQFFNHLKTNSHLSDSAPLA 347
            D + W  +                    +ITR L +   AL+FFN ++ NS   DS  L+
Sbjct: 65   D-NDWNEDKLHQLLFPTTSPPPPPHNLLQITRLLGSTAKALKFFNWVQANSPCQDSPLLS 123

Query: 348  F--QAVLELTMRENPDCPGKLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVF 521
            F  +AV E   RE P+   KL +LF +SK    PLSVNA TLLI+CF RA+M+DE  +V+
Sbjct: 124  FTLEAVFEHASRE-PNSHNKLLDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVY 182

Query: 522  DAIDDEMKNTDVLNLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKR 701
            + +    + T + N++I  L R GRVDDAL LL+EM +P + + PN+NT  IVFS++ KR
Sbjct: 183  NELCPSRRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKR 242

Query: 702  NWCGRSVTDEEIYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSD 881
            +  GR+V +EEI  LVS+F EH V  +   LTQ+I R CR+G  D+AW VLH  M  G  
Sbjct: 243  DKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGV 302

Query: 882  VEVASCNALLTGLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEV 1061
            +E ASCNALLT LG+  +F RMN L+ EMKE  ++PNVVT+GI+I HLCKFRR+DEALEV
Sbjct: 303  MEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEV 362

Query: 1062 LEKMRDGELG---VEPDVVIYNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCL 1232
             EKM  GE     VEPDV+ YNT IDGLCKVGR EEGL L+ERMR + +C PNT+TYNCL
Sbjct: 363  FEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCL 422

Query: 1233 IDGFCKAGEIARGRELFEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGL 1412
            IDG+CKA  I   RELF+QM K+GV  NV+T+NTL+DGMCKHG ++ A+EFF++M+ KGL
Sbjct: 423  IDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGL 482

Query: 1413 KGNVVSYTALITAFCNANNIDKAMKLFDEMRENGCSPDAVVYYSLISGLSQAGRMDDATF 1592
            KGN V+YTALI AFCN NNI+KAM+LFDEM E GCSPDA+VYY+LISGLSQAG++D A+F
Sbjct: 483  KGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASF 542

Query: 1593 ILSKMKEAGFCLDIVGYNILIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFC 1772
            +LSKMKEAGF  DIV +N+LI GFCRKNKLD+A E+LK+MEN+G+KPD VTYN L+S F 
Sbjct: 543  VLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFS 602

Query: 1773 SNGDFTHAHRVMRKMIDEGLTPTVVTYGALINAYCSNDHLDAAMKIFRDMRSSS 1934
              GDF+ AHR+M+KM+ EGL PTVVTYGALI+AYC N +LD AMKIFRDM S+S
Sbjct: 603  KTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTS 656



 Score =  160 bits (404), Expect = 2e-36
 Identities = 115/428 (26%), Positives = 191/428 (44%), Gaps = 37/428 (8%)
 Frame = +3

Query: 399  KLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKN-----TDVL- 560
            ++  L    K+ +   +V    +LI    + + +DE + VF+ ++    N      DV+ 
Sbjct: 323  RMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVIT 382

Query: 561  -NLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNW--CGRSVTDE 731
             N +I GL + GR ++ L L+E M     C  PNT T   +     K +     R + D+
Sbjct: 383  YNTLIDGLCKVGRQEEGLGLVERMRSQPRC-MPNTVTYNCLIDGYCKASMIEAARELFDQ 441

Query: 732  ------------------------EIYNLVSRFGE-HGVSLSGFCLTQ--VIMRFCRNGD 830
                                     I   V  F E  G  L G  +T   +I  FC   +
Sbjct: 442  MNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNN 501

Query: 831  CDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGI 1010
             +KA  +  E + +G   +      L++GL Q     R + ++ +MKE G  P++V++ +
Sbjct: 502  IEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNV 561

Query: 1011 MIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIYNTSIDGLCKVGRHEEGLKLMERMRL 1190
            +I   C+  ++DEA E+L++M +   G++PD V YNT I    K G      +LM++M  
Sbjct: 562  LINGFCRKNKLDEAYEMLKEMENA--GIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVK 619

Query: 1191 ESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEG-VELNVITINTLLDGMCKHGMV 1367
            E    P  +TY  LI  +C  G +    ++F  M     V  N +  N L++ +C+   V
Sbjct: 620  EGLV-PTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQV 678

Query: 1368 SSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEMRENGCSPDAVVYYSL 1547
              A+    DM+ KG+K N  ++ A+       N + KA +L D M E+ C+PD +    L
Sbjct: 679  DLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEIL 738

Query: 1548 ISGLSQAG 1571
               LS  G
Sbjct: 739  TEWLSAVG 746



 Score =  110 bits (274), Expect = 3e-21
 Identities = 87/338 (25%), Positives = 154/338 (45%), Gaps = 32/338 (9%)
 Frame = +3

Query: 468  LIKCFSRAKMLDEMIMVFDAI--DDEMKNTDVLNLVIAGLLRWGRVDDALKLLEEMFEPD 641
            LI  + +A M++    +FD +  D    N   LN ++ G+ + GR++ A++   EM    
Sbjct: 422  LIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKG 481

Query: 642  S--------------CYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHG-VS 776
                           C   N      +F  +L+    G S      Y L+S   + G + 
Sbjct: 482  LKGNAVTYTALIRAFCNVNNIEKAMELFDEMLE---AGCSPDAIVYYTLISGLSQAGKLD 538

Query: 777  LSGFCLTQV---------------IMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALL 911
             + F L+++               I  FCR    D+A+ +L E  N+G   +  + N L+
Sbjct: 539  RASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLI 598

Query: 912  TGLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELG 1091
            +   +  DFS  + LMK+M ++G+ P VVTYG +I   C    +DEA+++   M      
Sbjct: 599  SHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSK- 657

Query: 1092 VEPDVVIYNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARG 1271
            V P+ VIYN  I+ LC+  + +  L LM+ M+++   +PNT T+N +  G  +   +++ 
Sbjct: 658  VPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKG-VKPNTNTFNAMFKGLQEKNWLSKA 716

Query: 1272 RELFEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEF 1385
             EL ++M +     + IT+  L + +   G  +    F
Sbjct: 717  FELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSF 754


>gb|AGZ20103.1| pentatricopeptide repeat-containing protein [Camellia sinensis]
          Length = 771

 Score =  682 bits (1760), Expect = 0.0
 Identities = 355/655 (54%), Positives = 455/655 (69%), Gaps = 21/655 (3%)
 Frame = +3

Query: 27   SGEPSMRRLIKPFKPPRAASAATLRHFSAD------PQPSPDLSTPV--SQTLSLLQITD 182
            S + ++ RL+KP       S   LRH S+       P+P P L   +  +Q L+LLQ T 
Sbjct: 9    SKQSNLLRLVKPNSSTTLPSLL-LRHLSSSATDPPPPEPPPPLPNSILTTQILNLLQ-TH 66

Query: 183  PSSWPTNXXXXXXXXXXXXXXXX-----KITRQLPNCQNALQFFNHLKTNSHLS---DSA 338
               W  N                     KITR L     AL FF   +T S       S 
Sbjct: 67   EIDWNNNNDELRQLLFSSTDSPHSFSLYKITRSLGTATKALNFFEFFRTQSPSPPDPSSL 126

Query: 339  PLAFQAVLELTMRENPDCPGKLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMV 518
              +FQA+ EL  ++ P+ P KL EL   SKD N PL+ ++ TLLI+CF+RA ++++ +++
Sbjct: 127  SSSFQAIFELASQQ-PNPPTKLSELLTISKDHNIPLNFSSATLLIRCFARAGLVEKSVLI 185

Query: 519  FDAIDDEMKNTDVLNLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILK 698
            F  +D ++KNT + NL++  LLR GRVDDA ++ +EM +PDS   PN  TV I  + +L 
Sbjct: 186  FKELDPDLKNTHISNLIVDILLRAGRVDDAFQVFDEMLKPDSESPPNEITVNIAMAGLLW 245

Query: 699  RNWCGRSVTDEEIYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGS 878
            R+  GRSV+DEEI  LVS+FGE GV  S   LTQ+I + CR G  D+AW V+H  M  G 
Sbjct: 246  RDRTGRSVSDEEIIGLVSKFGECGVFPSVVRLTQLITKLCRTGKSDRAWDVIHNVMKLGG 305

Query: 879  DVEVASCNALLTGLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALE 1058
            DV+  SCNALL GLG+  +F +MN L+ EMKE G++P+++T+GI++ HLCKFRR+DEALE
Sbjct: 306  DVQAPSCNALLAGLGRQQNFQKMNKLLAEMKENGIQPDIITFGILVNHLCKFRRVDEALE 365

Query: 1059 VLEKMR-----DGELGVEPDVVIYNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITY 1223
            V EKM      D    V+PD ++YNT IDGLCKVGR E+GL L+E+M+LE  C P T TY
Sbjct: 366  VFEKMSGERESDDGFSVKPDTILYNTLIDGLCKVGRQEQGLGLLEKMKLEQGCAPTTATY 425

Query: 1224 NCLIDGFCKAGEIARGRELFEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMRE 1403
            NCLIDGFCK+GEI R  ELF+QM KEGV  NVIT+NTL+DGMCKHG ++SAMEFF++M+ 
Sbjct: 426  NCLIDGFCKSGEIGRAHELFDQMNKEGVPPNVITLNTLVDGMCKHGRINSAMEFFNEMQG 485

Query: 1404 KGLKGNVVSYTALITAFCNANNIDKAMKLFDEMRENGCSPDAVVYYSLISGLSQAGRMDD 1583
            KGLKGN V+YTALI AFCNANNIDKAM+LF+EM +  CSPDA+VYY+LISGL+QAG++DD
Sbjct: 486  KGLKGNAVTYTALINAFCNANNIDKAMQLFNEMSKAECSPDAIVYYTLISGLTQAGKLDD 545

Query: 1584 ATFILSKMKEAGFCLDIVGYNILIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLS 1763
            A+F+ + MK+AGFCLDI+ YNILIGGFC KNKLDKA E+LK+ME +G+KPD +TYN L+S
Sbjct: 546  ASFVATVMKKAGFCLDIMSYNILIGGFCSKNKLDKAYEMLKEMEQAGVKPDGITYNSLIS 605

Query: 1764 FFCSNGDFTHAHRVMRKMIDEGLTPTVVTYGALINAYCSNDHLDAAMKIFRDMRS 1928
            +F  NGDF  AHRVMR+MI +GL PTVVT GALI+AYC    LD AMKIFRDM S
Sbjct: 606  YFSKNGDFMTAHRVMREMISDGLVPTVVTCGALIHAYCLVGKLDEAMKIFRDMNS 660



 Score =  161 bits (408), Expect = 8e-37
 Identities = 119/472 (25%), Positives = 215/472 (45%), Gaps = 10/472 (2%)
 Frame = +3

Query: 399  KLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTD-------- 554
            K+ +L    K+      +    +L+    + + +DE + VF+ +  E ++ D        
Sbjct: 327  KMNKLLAEMKENGIQPDIITFGILVNHLCKFRRVDEALEVFEKMSGERESDDGFSVKPDT 386

Query: 555  -VLNLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDE 731
             + N +I GL + GR +  L LLE+M     C  P T T                     
Sbjct: 387  ILYNTLIDGLCKVGRQEQGLGLLEKMKLEQGC-APTTAT--------------------- 424

Query: 732  EIYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALL 911
              YN               CL   I  FC++G+  +A  +  +    G    V + N L+
Sbjct: 425  --YN---------------CL---IDGFCKSGEIGRAHELFDQMNKEGVPPNVITLNTLV 464

Query: 912  TGLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELG 1091
             G+ ++   +       EM+ KG++ N VTY  +I   C    +D+A+++  +M   E  
Sbjct: 465  DGMCKHGRINSAMEFFNEMQGKGLKGNAVTYTALINAFCNANNIDKAMQLFNEMSKAECS 524

Query: 1092 VEPDVVIYNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARG 1271
              PD ++Y T I GL + G+ ++   +   M+    C  + ++YN LI GFC   ++ + 
Sbjct: 525  --PDAIVYYTLISGLTQAGKLDDASFVATVMKKAGFCL-DIMSYNILIGGFCSKNKLDKA 581

Query: 1272 RELFEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITA 1451
             E+ ++M++ GV+ + IT N+L+    K+G   +A     +M   GL   VV+  ALI A
Sbjct: 582  YEMLKEMEQAGVKPDGITYNSLISYFSKNGDFMTAHRVMREMISDGLVPTVVTCGALIHA 641

Query: 1452 FCNANNIDKAMKLFDEMREN-GCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCL 1628
            +C    +D+AMK+F +M       P+ V+Y  L+  L +  +++ A  ++  MK+ G   
Sbjct: 642  YCLVGKLDEAMKIFRDMNSGLRVPPNTVIYNILVDALCKNRKVEVALSLMDDMKDKGVRP 701

Query: 1629 DIVGYNILIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGD 1784
            +   +N ++ G    N L+KA E++  M      PD +T  +L+ +  + G+
Sbjct: 702  NTNTFNAMLKGLKEINWLEKAFELMDQMTEHACNPDYITMEILIDWLPAVGE 753


>ref|XP_006339632.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Solanum tuberosum]
          Length = 761

 Score =  674 bits (1740), Expect = 0.0
 Identities = 351/635 (55%), Positives = 444/635 (69%), Gaps = 15/635 (2%)
 Frame = +3

Query: 72   PRAASAATLRHFSAD------PQPSPDLSTPVSQTLSLLQITDPSSWPTNXXXXXXXXXX 233
            P+  S + LRHFS +      P P P  S  V + +SLL+  D + W +N          
Sbjct: 17   PKTGSISGLRHFSGEIDDTQKPLPPPPTSFAVPEIVSLLKTNDHNDWISNSQLVEFLHTP 76

Query: 234  XXXXXX-KITRQLPNCQNALQFFNHLKTNSHLSDSAP----LAFQAVLELTMRENP-DCP 395
                   KITRQL + + AL FF   KT+S  S S P      FQA+LE  M E   D P
Sbjct: 77   PSPTSLLKITRQLGSTEKALHFFEFFKTHSSSSSSNPSSLSFTFQAILEQAMHEEKSDVP 136

Query: 396  GKLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDVLNLVIA 575
            GKL++LF  +KD+  PLS+NA TLL++CF RAKML+E I V++ +D + +NT+V+NL++ 
Sbjct: 137  GKLFQLFSFAKDRKIPLSINAATLLMRCFGRAKMLEESISVYNELDSDSRNTNVVNLLLD 196

Query: 576  GLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSR 755
             L R   +DD  K+L+EM + +S + PN +TV IV  ++ KRNW GR ++ EEI  L+ R
Sbjct: 197  CLFRGVNIDDGFKVLDEMLKRESDFPPNNSTVDIVLDAMWKRNWVGRRMSVEEICGLLVR 256

Query: 756  FGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHD 935
            F EHGV L     T++I +FCR+G CDKAW +LH+ M  G  V+ +S NALL+GLG+ HD
Sbjct: 257  FFEHGVFLDDVWFTKLITKFCRSGKCDKAWDLLHDMMKLGGQVKASSFNALLSGLGREHD 316

Query: 936  FSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELG---VEPDV 1106
            F +MNLLM  MKEK V P+VVT+GI I HLCK  R+DEAL+V EKM   E     V+PDV
Sbjct: 317  FQKMNLLMNVMKEKEVNPDVVTFGIFINHLCKCYRVDEALQVFEKMGGSETDGVLVKPDV 376

Query: 1107 VIYNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFE 1286
            V+YNT IDGLCKVG+ EEGLKLME+MRL++   PNTITYNCLIDGFCKAGEI R  ELF+
Sbjct: 377  VLYNTLIDGLCKVGKQEEGLKLMEKMRLKNGSVPNTITYNCLIDGFCKAGEIERSLELFD 436

Query: 1287 QMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNAN 1466
            QMK + V  NVIT+NTLL GMCK G VSSAM FF++M+EKGLKGNV++YT LIT FC+ N
Sbjct: 437  QMKMDRVVPNVITMNTLLHGMCKFGRVSSAMSFFAEMQEKGLKGNVITYTVLITTFCSVN 496

Query: 1467 NIDKAMKLFDEMRENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYN 1646
            NID+AM LF+EM EN C PDA VYYSLI GL QA R DDA+ I SK KEAG  LDI+ YN
Sbjct: 497  NIDRAMSLFNEMSENRCLPDAKVYYSLIMGLCQARRTDDASCIASKAKEAGIGLDIICYN 556

Query: 1647 ILIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRVMRKMIDE 1826
             LIG  CRKNK+D+A ++LKDME +G+KPD  TYN L+S+F   G FT A R+M++MID+
Sbjct: 557  ALIGALCRKNKIDEAHKMLKDMEEAGIKPDCYTYNTLISYFSEKGQFTTASRIMKRMIDD 616

Query: 1827 GLTPTVVTYGALINAYCSNDHLDAAMKIFRDMRSS 1931
            G  P VVTYGALI+A+C   +LD AMKIF++M S+
Sbjct: 617  GFLPNVVTYGALIHAFCLAGNLDEAMKIFQNMSSA 651



 Score =  164 bits (414), Expect = 2e-37
 Identities = 116/445 (26%), Positives = 214/445 (48%), Gaps = 6/445 (1%)
 Frame = +3

Query: 468  LIKCFSRAKMLDEMIMVFDAIDDEMKNTDVLN--LVIAGLLRWGRVDDALKLLEEMFEPD 641
            L+    R     +M ++ + + ++  N DV+   + I  L +  RVD+AL++ E+M   +
Sbjct: 307  LLSGLGREHDFQKMNLLMNVMKEKEVNPDVVTFGIFINHLCKCYRVDEALQVFEKMGGSE 366

Query: 642  S---CYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSLSGFCLTQVIMR 812
            +     +P+     +V  + L    C     +E +  +     ++G   +      +I  
Sbjct: 367  TDGVLVKPD-----VVLYNTLIDGLCKVGKQEEGLKLMEKMRLKNGSVPNTITYNCLIDG 421

Query: 813  FCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKEMKEKGVEPN 992
            FC+ G+ +++  +  +         V + N LL G+ +    S       EM+EKG++ N
Sbjct: 422  FCKAGEIERSLELFDQMKMDRVVPNVITMNTLLHGMCKFGRVSSAMSFFAEMQEKGLKGN 481

Query: 993  VVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIYNTSIDGLCKVGRHEEGLKL 1172
            V+TY ++I   C    +D A+ +  +M +      PD  +Y + I GLC+  R ++   +
Sbjct: 482  VITYTVLITTFCSVNNIDRAMSLFNEMSENRC--LPDAKVYYSLIMGLCQARRTDDASCI 539

Query: 1173 MERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGVELNVITINTLLDGMC 1352
              + + E+    + I YN LI   C+  +I    ++ + M++ G++ +  T NTL+    
Sbjct: 540  ASKAK-EAGIGLDIICYNALIGALCRKNKIDEAHKMLKDMEEAGIKPDCYTYNTLISYFS 598

Query: 1353 KHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEMREN-GCSPDA 1529
            + G  ++A      M + G   NVV+Y ALI AFC A N+D+AMK+F  M       P+ 
Sbjct: 599  EKGQFTTASRIMKRMIDDGFLPNVVTYGALIHAFCLAGNLDEAMKIFQNMSSAINVPPNT 658

Query: 1530 VVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILIGGFCRKNKLDKASEILKD 1709
            V+Y  LI  LS++ +++ A  +L +MK+ G   +   YN L  G   +N ++KA EI+  
Sbjct: 659  VIYNILIDTLSKSDKVEAAISLLGEMKDKGVRPNTKTYNALFKGLQERNWVEKAFEIMDQ 718

Query: 1710 MENSGLKPDRVTYNMLLSFFCSNGD 1784
            M  +   PD +T  +L  +    G+
Sbjct: 719  MTENACNPDYITMEVLTPWLSDIGE 743



 Score =  149 bits (376), Expect = 4e-33
 Identities = 109/408 (26%), Positives = 190/408 (46%), Gaps = 37/408 (9%)
 Frame = +3

Query: 468  LIKCFSRAKMLDEMIMVFDAI-----DDEMKNTDVL--NLVIAGLLRWGRVDDALKLLEE 626
            L KC+     +DE + VF+ +     D  +   DV+  N +I GL + G+ ++ LKL+E+
Sbjct: 346  LCKCYR----VDEALQVFEKMGGSETDGVLVKPDVVLYNTLIDGLCKVGKQEEGLKLMEK 401

Query: 627  MFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVT-------DEEIYNLVS---------RF 758
            M   +    PNT T   +     K     RS+        D  + N+++         +F
Sbjct: 402  MRLKNGSV-PNTITYNCLIDGFCKAGEIERSLELFDQMKMDRVVPNVITMNTLLHGMCKF 460

Query: 759  GEHGVSLSGFC-------------LTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASC 899
            G    ++S F               T +I  FC   + D+A ++ +E   +    +    
Sbjct: 461  GRVSSAMSFFAEMQEKGLKGNVITYTVLITTFCSVNNIDRAMSLFNEMSENRCLPDAKVY 520

Query: 900  NALLTGLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRD 1079
             +L+ GL Q       + +  + KE G+  +++ Y  +I  LC+  ++DEA ++L+ M  
Sbjct: 521  YSLIMGLCQARRTDDASCIASKAKEAGIGLDIICYNALIGALCRKNKIDEAHKMLKDME- 579

Query: 1080 GELGVEPDVVIYNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGE 1259
             E G++PD   YNT I    + G+     ++M+RM ++    PN +TY  LI  FC AG 
Sbjct: 580  -EAGIKPDCYTYNTLISYFSEKGQFTTASRIMKRM-IDDGFLPNVVTYGALIHAFCLAGN 637

Query: 1260 IARGRELFEQMKKE-GVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYT 1436
            +    ++F+ M     V  N +  N L+D + K   V +A+    +M++KG++ N  +Y 
Sbjct: 638  LDEAMKIFQNMSSAINVPPNTVIYNILIDTLSKSDKVEAAISLLGEMKDKGVRPNTKTYN 697

Query: 1437 ALITAFCNANNIDKAMKLFDEMRENGCSPDAVVYYSLISGLSQAGRMD 1580
            AL       N ++KA ++ D+M EN C+PD +    L   LS  G  +
Sbjct: 698  ALFKGLQERNWVEKAFEIMDQMTENACNPDYITMEVLTPWLSDIGETE 745



 Score =  112 bits (281), Expect = 4e-22
 Identities = 84/337 (24%), Positives = 147/337 (43%), Gaps = 31/337 (9%)
 Frame = +3

Query: 468  LIKCFSRAKMLDEMIMVFDAI--DDEMKNTDVLNLVIAGLLRWGRVDDALKLLEEMFEPD 641
            LI  F +A  ++  + +FD +  D  + N   +N ++ G+ ++GRV  A+    EM E  
Sbjct: 418  LIDGFCKAGEIERSLELFDQMKMDRVVPNVITMNTLLHGMCKFGRVSSAMSFFAEMQEKG 477

Query: 642  SCYQPNTNTVGIVFSSILKRNWCGRSVT------------DEEIYN-------------- 743
               + N  T  ++ ++    N   R+++            D ++Y               
Sbjct: 478  --LKGNVITYTVLITTFCSVNNIDRAMSLFNEMSENRCLPDAKVYYSLIMGLCQARRTDD 535

Query: 744  ---LVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLT 914
               + S+  E G+ L   C   +I   CR    D+A  +L +   +G   +  + N L++
Sbjct: 536  ASCIASKAKEAGIGLDIICYNALIGALCRKNKIDEAHKMLKDMEEAGIKPDCYTYNTLIS 595

Query: 915  GLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGV 1094
               +   F+  + +MK M + G  PNVVTYG +I   C    +DEA+++ + M    + V
Sbjct: 596  YFSEKGQFTTASRIMKRMIDDGFLPNVVTYGALIHAFCLAGNLDEAMKIFQNMSSA-INV 654

Query: 1095 EPDVVIYNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGR 1274
             P+ VIYN  ID L K  + E  + L+  M+ +    PNT TYN L  G  +   + +  
Sbjct: 655  PPNTVIYNILIDTLSKSDKVEAAISLLGEMK-DKGVRPNTKTYNALFKGLQERNWVEKAF 713

Query: 1275 ELFEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEF 1385
            E+ +QM +     + IT+  L   +   G       F
Sbjct: 714  EIMDQMTENACNPDYITMEVLTPWLSDIGETEKLRSF 750


>ref|XP_004231193.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Solanum lycopersicum]
          Length = 761

 Score =  674 bits (1738), Expect = 0.0
 Identities = 352/636 (55%), Positives = 448/636 (70%), Gaps = 16/636 (2%)
 Frame = +3

Query: 72   PRAASAATLRHFSAD------PQPSPDLSTPVSQTLSLLQITDPSSWPTNXXXXXXXXXX 233
            P+  S + LR FS +      P P P +S  V + +SLL+ TD + W +N          
Sbjct: 17   PKTGSISGLRCFSGEIDDTQKPLPQPPISFAVPEIVSLLKTTDHNDWISNSELVEYLHTP 76

Query: 234  XXXXXX-KITRQLPNCQNALQFFNHLKTNSHLSDSAP----LAFQAVLELTMRENP-DCP 395
                   KITRQL + + ALQFF   KT+S  S S P      FQA+LE  MRE   D P
Sbjct: 77   PSPTSLLKITRQLGSTEKALQFFEFFKTHSSSSSSNPSSLSFTFQAILEQAMREEKSDVP 136

Query: 396  GKLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDVLNLVIA 575
             KL++LF  +KD+  PLS+NAGTLL++CF RAKML+E I V+  +D + +NT+V+NL++ 
Sbjct: 137  RKLFQLFSFAKDRKIPLSINAGTLLMRCFGRAKMLEESISVYHELDSDSRNTNVVNLLLD 196

Query: 576  GLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSR 755
             L R   +DD  K+L+EM + DS + PN +TV IV S++ K NW GR ++ EEIY L+ R
Sbjct: 197  CLFRGRNIDDGFKVLDEMLKRDSDFPPNNSTVDIVLSAMWKSNWVGRRMSVEEIYGLLVR 256

Query: 756  FGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHD 935
            F EHGV L     T++I +FCR+G CDKAW +LH+ M  G  V+ +S NALL GLG+ HD
Sbjct: 257  FFEHGVFLDDVWFTKLITKFCRSGKCDKAWDLLHDMMKLGGQVKASSFNALLCGLGREHD 316

Query: 936  FSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKM----RDGELGVEPD 1103
            F +MNLLM EMKEK V P+VVT+GI I +LCK  R+DEAL+V EKM     DG L V+PD
Sbjct: 317  FQKMNLLMNEMKEKEVNPDVVTFGIFINYLCKCYRVDEALQVFEKMGGSGTDGVL-VKPD 375

Query: 1104 VVIYNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELF 1283
            +V+YNT IDGLCKVG+ EEGLKLME+MRLE+ C PNTITYNCLIDG+CKAGEI R  ELF
Sbjct: 376  LVLYNTLIDGLCKVGKQEEGLKLMEKMRLENVCVPNTITYNCLIDGYCKAGEIERSLELF 435

Query: 1284 EQMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNA 1463
            +QMKK+ V  NVIT+NTLL GMCK G VSSAM FF++M+E+GLKGN ++YT LIT FC+ 
Sbjct: 436  DQMKKDRVVPNVITMNTLLHGMCKFGRVSSAMRFFAEMQERGLKGNAITYTILITTFCSV 495

Query: 1464 NNIDKAMKLFDEMRENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGY 1643
            NNID+AM LF+EM E+GC PDA  YYSLI GL QA R D+A+ I SK KEA   LDI+ Y
Sbjct: 496  NNIDRAMSLFNEMSEDGCLPDARAYYSLIMGLCQARRTDEASCIASKAKEARVDLDIICY 555

Query: 1644 NILIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRVMRKMID 1823
            N LIG  CRKNK+++A ++LKDME +G+KPD  TYN L+S+F   G FT A R+M++MID
Sbjct: 556  NSLIGALCRKNKIEEAQKMLKDMEEAGIKPDCYTYNTLISYFSEKGQFTAASRIMKRMID 615

Query: 1824 EGLTPTVVTYGALINAYCSNDHLDAAMKIFRDMRSS 1931
            +G  P VVTYGALI+AYC   +LD AM IF++M S+
Sbjct: 616  DGYLPDVVTYGALIHAYCVAGNLDEAMTIFQNMSSA 651



 Score =  157 bits (398), Expect = 1e-35
 Identities = 118/447 (26%), Positives = 208/447 (46%), Gaps = 8/447 (1%)
 Frame = +3

Query: 468  LIKCFSRAKMLDEMIMVFDAI-----DDEMKNTDVL--NLVIAGLLRWGRVDDALKLLEE 626
            L KC+     +DE + VF+ +     D  +   D++  N +I GL + G+ ++ LKL+E+
Sbjct: 346  LCKCYR----VDEALQVFEKMGGSGTDGVLVKPDLVLYNTLIDGLCKVGKQEEGLKLMEK 401

Query: 627  MFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSLSGFCLTQVI 806
            M   + C  PNT T                       YN               CL   I
Sbjct: 402  MRLENVCV-PNTIT-----------------------YN---------------CL---I 419

Query: 807  MRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKEMKEKGVE 986
              +C+ G+ +++  +  +         V + N LL G+ +    S       EM+E+G++
Sbjct: 420  DGYCKAGEIERSLELFDQMKKDRVVPNVITMNTLLHGMCKFGRVSSAMRFFAEMQERGLK 479

Query: 987  PNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIYNTSIDGLCKVGRHEEGL 1166
             N +TY I+I   C    +D A+ +  +M   E G  PD   Y + I GLC+  R +E  
Sbjct: 480  GNAITYTILITTFCSVNNIDRAMSLFNEM--SEDGCLPDARAYYSLIMGLCQARRTDEAS 537

Query: 1167 KLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGVELNVITINTLLDG 1346
             +  + + E++ + + I YN LI   C+  +I   +++ + M++ G++ +  T NTL+  
Sbjct: 538  CIASKAK-EARVDLDIICYNSLIGALCRKNKIEEAQKMLKDMEEAGIKPDCYTYNTLISY 596

Query: 1347 MCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEMREN-GCSP 1523
              + G  ++A      M + G   +VV+Y ALI A+C A N+D+AM +F  M       P
Sbjct: 597  FSEKGQFTAASRIMKRMIDDGYLPDVVTYGALIHAYCVAGNLDEAMTIFQNMSSAINVPP 656

Query: 1524 DAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILIGGFCRKNKLDKASEIL 1703
            + V+Y  L+  L ++ +++ A  +L  MK+ G   +   +N L  G   +N ++KA EI+
Sbjct: 657  NTVIYNILVDTLCKSDKLEAAISLLGDMKDKGVRPNTKTFNALFKGLRERNWVEKALEIM 716

Query: 1704 KDMENSGLKPDRVTYNMLLSFFCSNGD 1784
              M  +   PD +T  +L  +    G+
Sbjct: 717  DQMTENACNPDYITMEVLTPWLSDIGE 743



 Score =  105 bits (263), Expect = 5e-20
 Identities = 80/337 (23%), Positives = 145/337 (43%), Gaps = 31/337 (9%)
 Frame = +3

Query: 468  LIKCFSRAKMLDEMIMVFDAI--DDEMKNTDVLNLVIAGLLRWGRVDDALKLLEEMFEPD 641
            LI  + +A  ++  + +FD +  D  + N   +N ++ G+ ++GRV  A++   EM E  
Sbjct: 418  LIDGYCKAGEIERSLELFDQMKKDRVVPNVITMNTLLHGMCKFGRVSSAMRFFAEMQERG 477

Query: 642  SCYQPNTNTVGIVFSSILKRNWCGRSVT-----------------------------DEE 734
               + N  T  I+ ++    N   R+++                              +E
Sbjct: 478  --LKGNAITYTILITTFCSVNNIDRAMSLFNEMSEDGCLPDARAYYSLIMGLCQARRTDE 535

Query: 735  IYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLT 914
               + S+  E  V L   C   +I   CR    ++A  +L +   +G   +  + N L++
Sbjct: 536  ASCIASKAKEARVDLDIICYNSLIGALCRKNKIEEAQKMLKDMEEAGIKPDCYTYNTLIS 595

Query: 915  GLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGV 1094
               +   F+  + +MK M + G  P+VVTYG +I   C    +DEA+ + + M    + V
Sbjct: 596  YFSEKGQFTAASRIMKRMIDDGYLPDVVTYGALIHAYCVAGNLDEAMTIFQNMSSA-INV 654

Query: 1095 EPDVVIYNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGR 1274
             P+ VIYN  +D LCK  + E  + L+  M+ +    PNT T+N L  G  +   + +  
Sbjct: 655  PPNTVIYNILVDTLCKSDKLEAAISLLGDMK-DKGVRPNTKTFNALFKGLRERNWVEKAL 713

Query: 1275 ELFEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEF 1385
            E+ +QM +     + IT+  L   +   G       F
Sbjct: 714  EIMDQMTENACNPDYITMEVLTPWLSDIGETEKLRSF 750


>gb|EOX95861.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
            cacao]
          Length = 764

 Score =  644 bits (1662), Expect = 0.0
 Identities = 341/644 (52%), Positives = 443/644 (68%), Gaps = 15/644 (2%)
 Frame = +3

Query: 48   RLIKPFKPPRAASAATLRHFSADPQPSP------DLSTPVSQTLSLLQITDPSSWPTNXX 209
            RL+KP  PP   S    RH   +P P P      D  + + Q + LL  T    W ++  
Sbjct: 17   RLLKP--PP--TSYLLHRHLCTEPNPEPLPAPPQDEESKIIQAVQLLLETPHEEWSSSQP 72

Query: 210  XXXXXXXXXXXXXX---KITRQLPNCQNALQFFNHLKTNSHLSDSAPLA--FQAVLELTM 374
                             +ITR+LP+   AL FF HL+ NS   D+  L+  FQAVLE   
Sbjct: 73   LQSLLFSSPPLSPRFLLQITRRLPSSSEALNFFKHLQQNSPSQDAQFLSYPFQAVLEQAG 132

Query: 375  RENPDCPGKLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTD 554
            RE PD   +L +L+  SK    PL+VNA  LLI+ F R +M+DE +++F+ +D  +KNT 
Sbjct: 133  RE-PDSATRLSQLYQDSKQWEIPLTVNAAVLLIRYFGRLEMVDESLLIFNELDPTLKNTH 191

Query: 555  VLNLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEE 734
            V N++I   LR GRVD AL +L+EM +P S   PN  T  IVF  ++KR   GR +++EE
Sbjct: 192  VRNVLIDVSLRDGRVDYALNVLDEMLQPLSEVPPNDVTGDIVFYGLVKRERKGRKLSEEE 251

Query: 735  IYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLT 914
            I  LV +FGEH V      LTQ+I R CR+G  ++AW VL E +   + +E A  NA+LT
Sbjct: 252  IIKLVLKFGEHSVFPRTIWLTQLITRLCRSGKINQAWNVLQELLRLRAPLEAAPFNAVLT 311

Query: 915  GLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDG---- 1082
            GLG++ D  RMN+L+ EMKE  ++PN VT+GI+I  LCK RR+DEA+EVL +M +G    
Sbjct: 312  GLGRSGDVERMNMLLVEMKESDIQPNGVTFGILINQLCKSRRVDEAMEVLNRMGEGTGSD 371

Query: 1083 ELGVEPDVVIYNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEI 1262
            ++ VE D++ YNT IDGLCKVGR EEGL+LMERMR      PNT+TYNCLIDGFCK GEI
Sbjct: 372  DVSVEADIITYNTLIDGLCKVGRQEEGLRLMERMRCTKGLAPNTVTYNCLIDGFCKVGEI 431

Query: 1263 ARGRELFEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTAL 1442
             RG+EL+++MK+EGV  NVIT+NTL+DGMC+HG  SSA+EFF+DM+ KGLKGN V+YT L
Sbjct: 432  ERGKELYDRMKEEGVSPNVITLNTLVDGMCRHGRTSSALEFFNDMQGKGLKGNAVTYTTL 491

Query: 1443 ITAFCNANNIDKAMKLFDEMRENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGF 1622
            I+AFCN NNIDKA+ LFD++  +GCS DA+VYYSLISGL QAGRMDDA+ +LSK+KEAGF
Sbjct: 492  ISAFCNVNNIDKAVDLFDQLLRSGCSADAIVYYSLISGLCQAGRMDDASNVLSKLKEAGF 551

Query: 1623 CLDIVGYNILIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHR 1802
            C D+  YN+LI GFC+KNK+DKA EILK+ME +G+K D VTYN L+++F   G+F  AHR
Sbjct: 552  CPDVACYNVLISGFCKKNKIDKAYEILKEMEEAGMKVDNVTYNTLIAYFSKIGEFGVAHR 611

Query: 1803 VMRKMIDEGLTPTVVTYGALINAYCSNDHLDAAMKIFRDMRSSS 1934
            VM+KMI EGL PTV TYGALI+AYC N ++  AMK+F++M S S
Sbjct: 612  VMKKMIGEGLVPTVATYGALIHAYCLNGNIKEAMKLFKNMSSIS 655



 Score =  158 bits (400), Expect = 7e-36
 Identities = 107/423 (25%), Positives = 200/423 (47%), Gaps = 7/423 (1%)
 Frame = +3

Query: 537  EMKNTDV------LNLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILK 698
            EMK +D+        ++I  L +  RVD+A+++L  M E       +     I +++++ 
Sbjct: 328  EMKESDIQPNGVTFGILINQLCKSRRVDEAMEVLNRMGEGTGSDDVSVEADIITYNTLID 387

Query: 699  RNWCGRSVTDEEIYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGS 878
               C     +E +  +       G++ +      +I  FC+ G+ ++   +       G 
Sbjct: 388  -GLCKVGRQEEGLRLMERMRCTKGLAPNTVTYNCLIDGFCKVGEIERGKELYDRMKEEGV 446

Query: 879  DVEVASCNALLTGLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALE 1058
               V + N L+ G+ ++   S       +M+ KG++ N VTY  +I   C    +D+A++
Sbjct: 447  SPNVITLNTLVDGMCRHGRTSSALEFFNDMQGKGLKGNAVTYTTLISAFCNVNNIDKAVD 506

Query: 1059 VLEKMRDGELGVEPDVVIYNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLID 1238
            + +++     G   D ++Y + I GLC+ GR ++   ++ +++    C P+   YN LI 
Sbjct: 507  LFDQLLRS--GCSADAIVYYSLISGLCQAGRMDDASNVLSKLKEAGFC-PDVACYNVLIS 563

Query: 1239 GFCKAGEIARGRELFEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKG 1418
            GFCK  +I +  E+ ++M++ G++++ +T NTL+    K G    A      M  +GL  
Sbjct: 564  GFCKKNKIDKAYEILKEMEEAGMKVDNVTYNTLIAYFSKIGEFGVAHRVMKKMIGEGLVP 623

Query: 1419 NVVSYTALITAFCNANNIDKAMKLFDEMRE-NGCSPDAVVYYSLISGLSQAGRMDDATFI 1595
             V +Y ALI A+C   NI +AMKLF  M   +   P+ ++Y  LI  L +   +  A  +
Sbjct: 624  TVATYGALIHAYCLNGNIKEAMKLFKNMSSISTIPPNTIIYNILIDSLCKNDEVQLALSM 683

Query: 1596 LSKMKEAGFCLDIVGYNILIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCS 1775
            +  M+  G   +   YN ++ G   KN L  A  ++  M      PD +T  +L  +  +
Sbjct: 684  MDDMQAKGVKPNTTTYNAILKGLKEKNWLGDAFRLMDSMVEHACNPDYITMEILTEWLSA 743

Query: 1776 NGD 1784
             G+
Sbjct: 744  VGE 746



 Score =  149 bits (377), Expect = 3e-33
 Identities = 120/435 (27%), Positives = 192/435 (44%), Gaps = 45/435 (10%)
 Frame = +3

Query: 411  LFVSSKDQNT-PLSVNAGTLLIKCFSRAKMLDEMIMVFDAI------DDEMKNTDVL--N 563
            L V  K+ +  P  V  G +LI    +++ +DE + V + +      DD     D++  N
Sbjct: 325  LLVEMKESDIQPNGVTFG-ILINQLCKSRRVDEAMEVLNRMGEGTGSDDVSVEADIITYN 383

Query: 564  LVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYN 743
             +I GL + GR ++ L+L+E M        PNT T   +     K    G     +E+Y+
Sbjct: 384  TLIDGLCKVGRQEEGLRLMERM-RCTKGLAPNTVTYNCLIDGFCK---VGEIERGKELYD 439

Query: 744  LVSRFGEHGVS---------LSGFC--------------------------LTQVIMRFC 818
               R  E GVS         + G C                           T +I  FC
Sbjct: 440  ---RMKEEGVSPNVITLNTLVDGMCRHGRTSSALEFFNDMQGKGLKGNAVTYTTLISAFC 496

Query: 819  RNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKEMKEKGVEPNVV 998
               + DKA  +  + + SG   +     +L++GL Q       + ++ ++KE G  P+V 
Sbjct: 497  NVNNIDKAVDLFDQLLRSGCSADAIVYYSLISGLCQAGRMDDASNVLSKLKEAGFCPDVA 556

Query: 999  TYGIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIYNTSIDGLCKVGRHEEGLKLME 1178
             Y ++I   CK  ++D+A E+L++M   E G++ D V YNT I    K+G      ++M+
Sbjct: 557  CYNVLISGFCKKNKIDKAYEILKEME--EAGMKVDNVTYNTLIAYFSKIGEFGVAHRVMK 614

Query: 1179 RMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKK-EGVELNVITINTLLDGMCK 1355
            +M  E    P   TY  LI  +C  G I    +LF+ M     +  N I  N L+D +CK
Sbjct: 615  KMIGEGLV-PTVATYGALIHAYCLNGNIKEAMKLFKNMSSISTIPPNTIIYNILIDSLCK 673

Query: 1356 HGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEMRENGCSPDAVV 1535
            +  V  A+    DM+ KG+K N  +Y A++      N +  A +L D M E+ C+PD + 
Sbjct: 674  NDEVQLALSMMDDMQAKGVKPNTTTYNAILKGLKEKNWLGDAFRLMDSMVEHACNPDYIT 733

Query: 1536 YYSLISGLSQAGRMD 1580
               L   LS  G  +
Sbjct: 734  MEILTEWLSAVGESE 748


>gb|EXB51620.1| hypothetical protein L484_012912 [Morus notabilis]
          Length = 769

 Score =  629 bits (1621), Expect = e-177
 Identities = 334/623 (53%), Positives = 428/623 (68%), Gaps = 10/623 (1%)
 Frame = +3

Query: 96   LRHFSADPQPSPDLSTPVSQTLSLLQITDPSSWPTNXXXXXXXXXXXXXXXXK---ITRQ 266
            LRH S +  P  D  T +S  L LLQ  + + W                   +   I R+
Sbjct: 31   LRHLSVESYPPKDDETFISHALQLLQPPE-TEWNAEQLQTLLFSDSESPSPTRLLHIARR 89

Query: 267  LPNCQNALQFFNHLKTNSHL-SDSAPLA--FQAVLELTMRENPDCPGKLYELFVSSKDQN 437
            L +   AL FF+H++ NSHL  DS+ LA  FQAVLEL  RE P    +L+EL+ +S+++N
Sbjct: 90   LDSSSKALNFFDHVRENSHLPKDSSLLASTFQAVLELASRE-PSWEKRLFELYTTSRERN 148

Query: 438  TPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDVLNLVIAGLLRWGRVDDALKL 617
             PL++NA TLL  CF RA M +E++ V   +DD+ KNT  LN VI  LLR G VDDAL +
Sbjct: 149  VPLTINAATLLFVCFGRAGMREELMTVLKGLDDDCKNTHALNRVIDVLLRLGCVDDALHV 208

Query: 618  LEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSLSGFCLT 797
            L+EM EPD  + PN  T   VF  +L R+   R   DEEI  LVSRFGEHGV   G  L 
Sbjct: 209  LDEMLEPDGKFPPNEVTGNAVFPLLLNRDRSFRRFEDEEIIGLVSRFGEHGVFPDGLLLR 268

Query: 798  QVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKEMKEK 977
            Q+I  FCR+     AW VL   + S   V   +CNALL GL ++ DF +MN LM++MKEK
Sbjct: 269  QLITNFCRDKKDGCAWDVLCNVIKSNGSVATDACNALLAGLARSKDFKKMNELMEKMKEK 328

Query: 978  GVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDG-ELG---VEPDVVIYNTSIDGLCKV 1145
             ++PNVVTYGI+I  LCK RR+D ALEV   +R G E G   V+PDV+IYNT IDGLCKV
Sbjct: 329  DIKPNVVTYGILINCLCKSRRIDGALEVFAVLRQGGENGKYLVKPDVIIYNTLIDGLCKV 388

Query: 1146 GRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGVELNVIT 1325
            GR EEGL LME+MR E  C+PNT+TYNCLIDGF K GEI RG ++F+QMK++ V  +V+T
Sbjct: 389  GRQEEGLNLMEQMRSEEFCKPNTVTYNCLIDGFNKVGEIERGLKIFDQMKRDQVPPDVVT 448

Query: 1326 INTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEMR 1505
            +NTL+DGMCK G V SA++ F  M+  G++GN  +YT LI AFC+ NNI+KAM+LFD+M 
Sbjct: 449  LNTLVDGMCKLGRVGSAVKLFDVMQRTGIQGNAFTYTMLIAAFCSVNNINKAMELFDQMV 508

Query: 1506 ENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILIGGFCRKNKLD 1685
             +  S DA++YYSLISGLS+AGRMDDA+ ++SK+KEAGFCLDIV YN+LI GFC+KNKLD
Sbjct: 509  SSRHSADAILYYSLISGLSRAGRMDDASMVVSKLKEAGFCLDIVAYNVLISGFCKKNKLD 568

Query: 1686 KASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRVMRKMIDEGLTPTVVTYGALI 1865
            KA E+LKDME +G+KP+ +TYN L+S FC  G F  AH+V++KM++ GL PTVVTYG+LI
Sbjct: 569  KAYEMLKDMEETGIKPNTITYNTLISHFCKIGSFETAHKVLQKMLNSGLAPTVVTYGSLI 628

Query: 1866 NAYCSNDHLDAAMKIFRDMRSSS 1934
            NAYC  D ++ AM++F  M S S
Sbjct: 629  NAYCMEDKIEEAMELFEWMSSGS 651



 Score =  177 bits (448), Expect = 2e-41
 Identities = 119/443 (26%), Positives = 210/443 (47%), Gaps = 41/443 (9%)
 Frame = +3

Query: 399  KLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDVL------ 560
            K+ EL    K+++   +V    +LI C  +++ +D  + VF  +    +N   L      
Sbjct: 317  KMNELMEKMKEKDIKPNVVTYGILINCLCKSRRIDGALEVFAVLRQGGENGKYLVKPDVI 376

Query: 561  --NLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNT----------NTVG---------- 674
              N +I GL + GR ++ L L+E+M   + C +PNT          N VG          
Sbjct: 377  IYNTLIDGLCKVGRQEEGLNLMEQMRSEEFC-KPNTVTYNCLIDGFNKVGEIERGLKIFD 435

Query: 675  ----------IVFSSILKRNWC--GRSVTDEEIYNLVSRFGEHGVSLSGFCLTQVIMRFC 818
                      +V  + L    C  GR  +  ++++++ R G  G   + F  T +I  FC
Sbjct: 436  QMKRDQVPPDVVTLNTLVDGMCKLGRVGSAVKLFDVMQRTGIQG---NAFTYTMLIAAFC 492

Query: 819  RNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKEMKEKGVEPNVV 998
               + +KA  +  + ++S    +     +L++GL +       ++++ ++KE G   ++V
Sbjct: 493  SVNNINKAMELFDQMVSSRHSADAILYYSLISGLSRAGRMDDASMVVSKLKEAGFCLDIV 552

Query: 999  TYGIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIYNTSIDGLCKVGRHEEGLKLME 1178
             Y ++I   CK  ++D+A E+L+ M   E G++P+ + YNT I   CK+G  E   K+++
Sbjct: 553  AYNVLISGFCKKNKLDKAYEMLKDME--ETGIKPNTITYNTLISHFCKIGSFETAHKVLQ 610

Query: 1179 RMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEG-VELNVITINTLLDGMCK 1355
            +M L S   P  +TY  LI+ +C   +I    ELFE M     +  N +  N L+D +CK
Sbjct: 611  KM-LNSGLAPTVVTYGSLINAYCMEDKIEEAMELFEWMSSGSKIPPNTVIYNILIDSLCK 669

Query: 1356 HGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEMRENGCSPDAVV 1535
               V  A+   +DM+ +G+K N  +Y AL       N +++A K  D+M +  C+PD + 
Sbjct: 670  KNDVKLALSLMNDMKVRGVKPNTTTYNALFKGLRENNLLEEAFKFMDQMADQSCNPDYIT 729

Query: 1536 YYSLISGLSQAGRMDDATFILSK 1604
               L   LS  G+ D+    L +
Sbjct: 730  MEVLAEWLSAVGKRDELMKFLQR 752


>ref|XP_002320827.2| pentatricopeptide repeat-containing family protein, partial [Populus
            trichocarpa] gi|550323783|gb|EEE99142.2|
            pentatricopeptide repeat-containing family protein,
            partial [Populus trichocarpa]
          Length = 720

 Score =  605 bits (1559), Expect = e-170
 Identities = 306/573 (53%), Positives = 422/573 (73%), Gaps = 12/573 (2%)
 Frame = +3

Query: 252  KITRQLPNCQNALQFFNHLKTNSHLS-DSAPL---AFQAVLELTMRENPDCPGKLYELFV 419
            +ITR+LP+   AL+F N+L+ NS  S D+  L    FQA+ EL   E PD    L  L+ 
Sbjct: 45   QITRRLPSSSQALKFLNYLQNNSPSSPDTQSLLSYTFQAIFELAFCE-PDSNANLSRLYK 103

Query: 420  SSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDVLNLVIAGLLRWGRV 599
            +SK+ N PL+VNA + L++   R+++++E +++F+ +D  +KNT + N+ ++ LLR GRV
Sbjct: 104  TSKELNIPLTVNAASFLLRASGRSELVEESLILFNDLDPSVKNTYLRNVWLSILLRSGRV 163

Query: 600  DDALKLLEEMFEP--DSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGV 773
             DALK+++EMFE   DS  +PN  T  I+FS +LKR      ++++EI NLV +FGEHGV
Sbjct: 164  KDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGV 223

Query: 774  SLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNL 953
             +S F + ++I R CRN   ++ W +  E +  G+ +E A+CN+LLTGL +  +F+RMN 
Sbjct: 224  LISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNE 283

Query: 954  LMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGE------LGVEPDVVIY 1115
            LM++M E  ++PNVVT+GI+I H+CKFRR+D+ALEVLEKM  G+      + VEPDVVIY
Sbjct: 284  LMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIY 343

Query: 1116 NTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMK 1295
            NT IDGLCKVGR +EGL LMERMR +  C P+TITYNCLIDGFCKAGEI +G+ELF++M 
Sbjct: 344  NTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMN 403

Query: 1296 KEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNID 1475
            KEGV  NV+T+NTL+ GMC+ G VSSA+ FF + + +G+KG+ V+YTALI AFCN NN +
Sbjct: 404  KEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFE 463

Query: 1476 KAMKLFDEMRENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILI 1655
            KAM+LF+EM ++GCSPDA+VYY+LISG SQAGRM DA+F+L+++K+ G   D V YN LI
Sbjct: 464  KAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLI 523

Query: 1656 GGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRVMRKMIDEGLT 1835
            GGFCR NK  +  E+LK+ME +GLKPD +TYN L+++   NGD   A +VMRKMI  G+ 
Sbjct: 524  GGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVV 583

Query: 1836 PTVVTYGALINAYCSNDHLDAAMKIFRDMRSSS 1934
            PTV TYGA+INAYC N + + AM+IF+DM+++S
Sbjct: 584  PTVATYGAVINAYCLNGNGNEAMEIFKDMKAAS 616



 Score =  152 bits (383), Expect = 7e-34
 Identities = 111/448 (24%), Positives = 203/448 (45%), Gaps = 13/448 (2%)
 Frame = +3

Query: 480  FSRAKMLDEMIMVFDAIDDEMKNTDVLNLVIAGLLRWGRVDDALKLLEEM---------- 629
            F+R   L E ++  D       N     ++I  + ++ RVDDAL++LE+M          
Sbjct: 278  FNRMNELMEKMVEMDI----QPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGIS 333

Query: 630  --FEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSLSGFCLTQV 803
               EPD           +V  + L    C      E +  +     + G +        +
Sbjct: 334  VSVEPD-----------VVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCL 382

Query: 804  IMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKEMKEKGV 983
            I  FC+ G+ +K   +  E    G    V + N L+ G+ +    S       E + +G+
Sbjct: 383  IDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGM 442

Query: 984  EPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIYNTSIDGLCKVGRHEEG 1163
            + + VTY  +I   C     ++A+E+  +M     G  PD ++Y T I G  + GR  + 
Sbjct: 443  KGDAVTYTALINAFCNVNNFEKAMELFNEMLKS--GCSPDAIVYYTLISGFSQAGRMADA 500

Query: 1164 LKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGVELNVITINTLLD 1343
              ++  ++ +    P+T+ YN LI GFC+  +  R  E+ ++M++ G++ + IT NTL+ 
Sbjct: 501  SFVLAELK-KLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIA 559

Query: 1344 GMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEMRE-NGCS 1520
               K+G +  A +    M + G+   V +Y A+I A+C   N ++AM++F +M+  +   
Sbjct: 560  YASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVP 619

Query: 1521 PDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILIGGFCRKNKLDKASEI 1700
            P+ V+Y  LI+ L +  ++  A  ++  MK  G   +   YN +  G   +  L+K  E 
Sbjct: 620  PNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEF 679

Query: 1701 LKDMENSGLKPDRVTYNMLLSFFCSNGD 1784
            +  M      PD +T  +L  +  + G+
Sbjct: 680  MDRMIEHACNPDYITMEILTEWLSAVGE 707



 Score =  139 bits (349), Expect = 6e-30
 Identities = 90/349 (25%), Positives = 164/349 (46%), Gaps = 1/349 (0%)
 Frame = +3

Query: 546  NTDVLNLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVT 725
            +T   N +I G  + G ++   +L +EM +      PN  TV  +   + +    GR  +
Sbjct: 375  DTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVA--PNVVTVNTLVGGMCRT---GRVSS 429

Query: 726  DEEIYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNA 905
                +    R G  G +++    T +I  FC   + +KA  + +E + SG   +      
Sbjct: 430  AVNFFVEAQRRGMKGDAVT---YTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYT 486

Query: 906  LLTGLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGE 1085
            L++G  Q    +  + ++ E+K+ G+ P+ V Y  +I   C+  +     E+L++M   E
Sbjct: 487  LISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEME--E 544

Query: 1086 LGVEPDVVIYNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIA 1265
             G++PD + YNT I    K G  +   K+M +M +++   P   TY  +I+ +C  G   
Sbjct: 545  AGLKPDTITYNTLIAYASKNGDLKFAQKVMRKM-IKAGVVPTVATYGAVINAYCLNGNGN 603

Query: 1266 RGRELFEQMKKEG-VELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTAL 1442
               E+F+ MK    V  N +  N L++ +CK+  V SA+    DM+  G+  N  +Y A+
Sbjct: 604  EAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAI 663

Query: 1443 ITAFCNANNIDKAMKLFDEMRENGCSPDAVVYYSLISGLSQAGRMDDAT 1589
                 +  +++K  +  D M E+ C+PD +    L   LS  G ++ +T
Sbjct: 664  FKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIESST 712


>ref|XP_006491189.1| PREDICTED: pentatricopeptide repeat-containing protein At5g28460-like
            [Citrus sinensis]
          Length = 757

 Score =  603 bits (1556), Expect = e-170
 Identities = 318/629 (50%), Positives = 424/629 (67%), Gaps = 16/629 (2%)
 Frame = +3

Query: 96   LRHFSADPQ-PSPDLSTP---VSQTLSLLQITDPSSW---PTNXXXXXXXXXXXXXXXXK 254
            LRHF  +   P P +S     ++Q L +L  T  + W   P                  +
Sbjct: 21   LRHFCTEHNSPLPQVSESSIIITQALDVLLQTPDNEWTSSPQIKNLLFSSTSLSPQLFFQ 80

Query: 255  ITRQLPNCQNALQFFNHLKTNSHL---SDSAPLAFQAVLELTMRENPDCPGKLYELFVSS 425
            ITR+ P+   AL FFN L++N      + S   A+QAV EL +RE    P  L++L+ + 
Sbjct: 81   ITRRFPSSSRALSFFNFLQSNLPTEANTSSLSYAYQAVFELAIRERMS-PESLFDLYKAC 139

Query: 426  KDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDVLNLVIAGLLRWGRVDD 605
            KDQN PLS+N+ TLLI+ F +  M D  ++V++ +D+ ++NT V N++I  LLR     D
Sbjct: 140  KDQNIPLSINSATLLIRFFGKVSMYDYSLLVYNELDNNLRNTHVRNVLIDVLLRCDHDRD 199

Query: 606  ALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSLSG 785
            A  +L+EM + +S +  N  T  IVF ++++R     SVTDEE+  LVS+F EHGV  + 
Sbjct: 200  AFNVLDEMLDRESQFPVNELTGDIVFYALMRREHVKNSVTDEELVGLVSKFAEHGVFPNA 259

Query: 786  FCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKE 965
              LTQ+I RFCR G  D+AW VLH  M   + +E ASCNALL  LG+  DF RMN L  E
Sbjct: 260  VWLTQLITRFCRKGKTDEAWDVLHVLMKFDAPLEAASCNALLNALGREGDFKRMNQLFTE 319

Query: 966  MKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDG----ELGVEPDVVIYNTSIDG 1133
            MKE  +EP+VVT+G +I  LCK  R DEALEV EKM  G    E+ VEPDV+I+NT IDG
Sbjct: 320  MKENDIEPSVVTFGTIINRLCKLYRADEALEVFEKMIAGKETAEISVEPDVIIFNTLIDG 379

Query: 1134 LCKVGRHEEGLKLME--RMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGV 1307
            LCKVG+ EE L L+E  R+RL+  C PN +TYNCLI+GFCK+G I +G ELF  MK+EGV
Sbjct: 380  LCKVGKQEEALGLIEQMRLRLQKGCMPNAVTYNCLINGFCKSGNIEKGLELFHLMKQEGV 439

Query: 1308 ELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMK 1487
              NV+T+NTL+DGMC+HG ++SA+EFF ++  KGL  N V+YT LITAFCN NN  +A+K
Sbjct: 440  TPNVVTLNTLVDGMCRHGRINSAVEFFQEVTRKGLCANAVTYTILITAFCNVNNFQEAIK 499

Query: 1488 LFDEMRENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILIGGFC 1667
             FD+M   GCS D+VVY++LISGL QAGRM+DA+ ++SK+KEAGF  DIV YN LI GFC
Sbjct: 500  WFDDMSRAGCSADSVVYFTLISGLCQAGRMNDASLVVSKLKEAGFRPDIVCYNHLISGFC 559

Query: 1668 RKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRVMRKMIDEGLTPTVV 1847
            +K  LDKA E+L++ME+ G+ P+ VTYN L+SF   +G+F+ A RV++KM+ EGL PTVV
Sbjct: 560  KKKMLDKAYEVLQEMEDIGMTPNSVTYNTLISFLSKSGNFSAARRVLKKMVKEGLVPTVV 619

Query: 1848 TYGALINAYCSNDHLDAAMKIFRDMRSSS 1934
            TYGALI+A+C N H+D AMKIF+++ SSS
Sbjct: 620  TYGALIHAFCVNGHVDEAMKIFKELSSSS 648



 Score =  174 bits (442), Expect = 9e-41
 Identities = 124/459 (27%), Positives = 216/459 (47%), Gaps = 10/459 (2%)
 Frame = +3

Query: 435  NTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDV------LNLVIAGLLRWGR 596
            + PL   +   L+    R      M  +F     EMK  D+         +I  L +  R
Sbjct: 289  DAPLEAASCNALLNALGREGDFKRMNQLFT----EMKENDIEPSVVTFGTIINRLCKLYR 344

Query: 597  VDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFG---EH 767
             D+AL++ E+M       + +     I+F++++    C +    EE   L+ +     + 
Sbjct: 345  ADEALEVFEKMIAGKETAEISVEPDVIIFNTLID-GLC-KVGKQEEALGLIEQMRLRLQK 402

Query: 768  GVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRM 947
            G   +      +I  FC++G+ +K   + H     G    V + N L+ G+ ++   +  
Sbjct: 403  GCMPNAVTYNCLINGFCKSGNIEKGLELFHLMKQEGVTPNVVTLNTLVDGMCRHGRINSA 462

Query: 948  NLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIYNTSI 1127
                +E+  KG+  N VTY I+I   C      EA++  + M     G   D V+Y T I
Sbjct: 463  VEFFQEVTRKGLCANAVTYTILITAFCNVNNFQEAIKWFDDM--SRAGCSADSVVYFTLI 520

Query: 1128 DGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGV 1307
             GLC+ GR  +   ++ +++ E+   P+ + YN LI GFCK   + +  E+ ++M+  G+
Sbjct: 521  SGLCQAGRMNDASLVVSKLK-EAGFRPDIVCYNHLISGFCKKKMLDKAYEVLQEMEDIGM 579

Query: 1308 ELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMK 1487
              N +T NTL+  + K G  S+A      M ++GL   VV+Y ALI AFC   ++D+AMK
Sbjct: 580  TPNSVTYNTLISFLSKSGNFSAARRVLKKMVKEGLVPTVVTYGALIHAFCVNGHVDEAMK 639

Query: 1488 LFDEM-RENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILIGGF 1664
            +F E+   +  SP+ V+Y  LI  L +  +++ A  ++ +MK      +   YN +  G 
Sbjct: 640  IFKELSSSSNVSPNTVIYNILIDSLCKNNQVELALSLMEEMKVKEVRPNTNTYNAMFKGL 699

Query: 1665 CRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNG 1781
             +KN LDKA +++  M      PD ++  +L  +    G
Sbjct: 700  RQKNMLDKAFKLMDRMIEHACHPDYISMEILTEWLSEAG 738



 Score =  152 bits (385), Expect = 4e-34
 Identities = 114/439 (25%), Positives = 200/439 (45%), Gaps = 45/439 (10%)
 Frame = +3

Query: 399  KLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDV------- 557
            ++ +LF   K+ +   SV     +I    +    DE + VF+ +    +  ++       
Sbjct: 312  RMNQLFTEMKENDIEPSVVTFGTIINRLCKLYRADEALEVFEKMIAGKETAEISVEPDVI 371

Query: 558  -LNLVIAGLLRWGRVDDALKLLEEM-FEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDE 731
              N +I GL + G+ ++AL L+E+M         PN  T   + +   K    G      
Sbjct: 372  IFNTLIDGLCKVGKQEEALGLIEQMRLRLQKGCMPNAVTYNCLINGFCKS---GNIEKGL 428

Query: 732  EIYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKA------------------WTVL- 854
            E+++L+    + GV+ +   L  ++   CR+G  + A                  +T+L 
Sbjct: 429  ELFHLMK---QEGVTPNVVTLNTLVDGMCRHGRINSAVEFFQEVTRKGLCANAVTYTILI 485

Query: 855  ---------HEGMNSGSDVEVASCNA-------LLTGLGQNHDFSRMNLLMKEMKEKGVE 986
                      E +    D+  A C+A       L++GL Q    +  +L++ ++KE G  
Sbjct: 486  TAFCNVNNFQEAIKWFDDMSRAGCSADSVVYFTLISGLCQAGRMNDASLVVSKLKEAGFR 545

Query: 987  PNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIYNTSIDGLCKVGRHEEGL 1166
            P++V Y  +I   CK + +D+A EVL++M D  +G+ P+ V YNT I  L K G      
Sbjct: 546  PDIVCYNHLISGFCKKKMLDKAYEVLQEMED--IGMTPNSVTYNTLISFLSKSGNFSAAR 603

Query: 1167 KLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEG-VELNVITINTLLD 1343
            +++++M  E    P  +TY  LI  FC  G +    ++F+++     V  N +  N L+D
Sbjct: 604  RVLKKMVKEGLV-PTVVTYGALIHAFCVNGHVDEAMKIFKELSSSSNVSPNTVIYNILID 662

Query: 1344 GMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEMRENGCSP 1523
             +CK+  V  A+    +M+ K ++ N  +Y A+       N +DKA KL D M E+ C P
Sbjct: 663  SLCKNNQVELALSLMEEMKVKEVRPNTNTYNAMFKGLRQKNMLDKAFKLMDRMIEHACHP 722

Query: 1524 DAVVYYSLISGLSQAGRMD 1580
            D +    L   LS+AG+ +
Sbjct: 723  DYISMEILTEWLSEAGQTE 741


>ref|XP_004301483.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 771

 Score =  576 bits (1484), Expect = e-161
 Identities = 293/566 (51%), Positives = 403/566 (71%), Gaps = 6/566 (1%)
 Frame = +3

Query: 255  ITRQLPNCQNALQFFNHLKTNSHLSDSAPL----AFQAVLELTMRENPDCPGKLYELFVS 422
            ITR+L +   AL+FF+ +  N    D        +FQA++ELT+R+ P     LYEL+  
Sbjct: 89   ITRRLASPNKALKFFDFVSQNLTPQDPPKALLSSSFQALVELTLRQPPS-ETNLYELYKM 147

Query: 423  SKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDVLNLVIAGLLRWGRVD 602
            +KD+N P+S  A  LL++   RA M +E ++VF+ ++  +K T + N+VI   L+ GRVD
Sbjct: 148  AKDRNVPISPKAAGLLVQSMGRAGMEEEALIVFNELESGLKTTHIRNVVIGMSLKMGRVD 207

Query: 603  DALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSLS 782
             ALK+L+EM +P++ +Q +  TV +V    L+    GRSV++EEI  LVS+FG  GV  +
Sbjct: 208  GALKVLDEMLDPEANFQVDEYTVDVVVGLFLRGEIRGRSVSEEEIAELVSKFGGRGVFPN 267

Query: 783  GFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMK 962
               LT+++   CRN     AW VLH+ M  G  VE A  NALL+ LG+ ++F RM  LM 
Sbjct: 268  SMVLTKLVSGLCRNRKVSLAWDVLHDVMKKGGAVEAAPYNALLSALGRGNEFKRMRELMA 327

Query: 963  EMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGV--EPDVVIYNTSIDGL 1136
            +M+E G++PNV+T+GI+I  LCK RR+  A+EV EKM  G  GV  EPDVVIYNT IDGL
Sbjct: 328  KMEEMGIKPNVITFGILINRLCKSRRIGAAMEVFEKMSGGVKGVSAEPDVVIYNTLIDGL 387

Query: 1137 CKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGVELN 1316
            CKVGR EEGL+LME+MR +S C PNT+TYN LIDGF K G+I +G ELF++MK+EG+ +N
Sbjct: 388  CKVGRQEEGLRLMEKMRSQSGCAPNTVTYNILIDGFNKVGDIEKGHELFDKMKEEGIPMN 447

Query: 1317 VITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFD 1496
            V T+NT+LDG+ + G +++A+EFF++M  KGLKGN V+YT LIT+FCN  NI KAM+LFD
Sbjct: 448  VSTLNTMLDGLSRRGRLNTALEFFNEMERKGLKGNAVTYTILITSFCNVTNIRKAMELFD 507

Query: 1497 EMRENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILIGGFCRKN 1676
            +M  +GC  DA VY+ LISGLSQAGRM+DA+F++SKMKEAGF +DIV YN +I GF  KN
Sbjct: 508  QMLSSGCPTDAKVYHCLISGLSQAGRMEDASFVVSKMKEAGFSMDIVSYNGMIRGFSSKN 567

Query: 1677 KLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRVMRKMIDEGLTPTVVTYG 1856
            K DK  E++++ME S +KPD VTYN LL++   +GDF  AH+V+ +M+ EG+ PTVVT+G
Sbjct: 568  KPDKIHEMIEEMEVSRVKPDSVTYNTLLAYLGKSGDFESAHKVLDRMLSEGIVPTVVTFG 627

Query: 1857 ALINAYCSNDHLDAAMKIFRDMRSSS 1934
             LI+A+C +  ++ AM+IFRDM S+S
Sbjct: 628  TLIHAHCLDGDIEKAMRIFRDMGSNS 653



 Score =  138 bits (348), Expect = 7e-30
 Identities = 106/433 (24%), Positives = 187/433 (43%), Gaps = 39/433 (9%)
 Frame = +3

Query: 399  KLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTD------VL 560
            ++ EL    ++     +V    +LI    +++ +   + VF+ +   +K         + 
Sbjct: 321  RMRELMAKMEEMGIKPNVITFGILINRLCKSRRIGAAMEVFEKMSGGVKGVSAEPDVVIY 380

Query: 561  NLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILK-------------- 698
            N +I GL + GR ++ L+L+E+M     C  PNT T  I+     K              
Sbjct: 381  NTLIDGLCKVGRQEEGLRLMEKMRSQSGC-APNTVTYNILIDGFNKVGDIEKGHELFDKM 439

Query: 699  ------------------RNWCGRSVTDEEIYNLVSRFGEHGVSLSGFCLTQVIMRFCRN 824
                               +  GR  T  E +N + R G  G +++    T +I  FC  
Sbjct: 440  KEEGIPMNVSTLNTMLDGLSRRGRLNTALEFFNEMERKGLKGNAVT---YTILITSFCNV 496

Query: 825  GDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKEMKEKGVEPNVVTY 1004
             +  KA  +  + ++SG   +    + L++GL Q       + ++ +MKE G   ++V+Y
Sbjct: 497  TNIRKAMELFDQMLSSGCPTDAKVYHCLISGLSQAGRMEDASFVVSKMKEAGFSMDIVSY 556

Query: 1005 GIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIYNTSIDGLCKVGRHEEGLKLMERM 1184
              MI+      + D+  E++E+M      V+PD V YNT +  L K G  E   K+++RM
Sbjct: 557  NGMIRGFSSKNKPDKIHEMIEEMEVSR--VKPDSVTYNTLLAYLGKSGDFESAHKVLDRM 614

Query: 1185 RLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEG-VELNVITINTLLDGMCKHG 1361
             L     P  +T+  LI   C  G+I +   +F  M     +  N +  N L++ +CK  
Sbjct: 615  -LSEGIVPTVVTFGTLIHAHCLDGDIEKAMRIFRDMGSNSKIPPNTVIYNDLINSLCKKN 673

Query: 1362 MVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEMRENGCSPDAVVYY 1541
                A+    DM++KG++ N  ++ AL       N + KA +  D+M E  C+PD +   
Sbjct: 674  DAEQALSLMEDMKKKGVRPNTQTFNALFKGLRENNLLKKAFQFMDQMVEEDCNPDYITME 733

Query: 1542 SLISGLSQAGRMD 1580
             L   L   G ++
Sbjct: 734  ILTEWLPGVGEIE 746



 Score =  117 bits (293), Expect = 2e-23
 Identities = 88/349 (25%), Positives = 158/349 (45%), Gaps = 8/349 (2%)
 Frame = +3

Query: 465  LLIKCFSRAKMLDEMIMVFDAIDDE--MKNTDVLNLVIAGLLRWGRVDDALKLLEEMFEP 638
            +LI  F++   +++   +FD + +E    N   LN ++ GL R GR++ AL+   EM   
Sbjct: 418  ILIDGFNKVGDIEKGHELFDKMKEEGIPMNVSTLNTMLDGLSRRGRLNTALEFFNEMERK 477

Query: 639  DSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSLSGFCLTQVIMRFC 818
                + N  T  I+ +S               + N+          LS  C T   +  C
Sbjct: 478  G--LKGNAVTYTILITSFCN------------VTNIRKAMELFDQMLSSGCPTDAKVYHC 523

Query: 819  ------RNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKEMKEKG 980
                  + G  + A  V+ +   +G  +++ S N ++ G    +   +++ +++EM+   
Sbjct: 524  LISGLSQAGRMEDASFVVSKMKEAGFSMDIVSYNGMIRGFSSKNKPDKIHEMIEEMEVSR 583

Query: 981  VEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIYNTSIDGLCKVGRHEE 1160
            V+P+ VTY  ++ +L K    + A +VL++M     G+ P VV + T I   C  G  E+
Sbjct: 584  VKPDSVTYNTLLAYLGKSGDFESAHKVLDRMLSE--GIVPTVVTFGTLIHAHCLDGDIEK 641

Query: 1161 GLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGVELNVITINTLL 1340
             +++   M   SK  PNT+ YN LI+  CK  +  +   L E MKK+GV  N  T N L 
Sbjct: 642  AMRIFRDMGSNSKIPPNTVIYNDLINSLCKKNDAEQALSLMEDMKKKGVRPNTQTFNALF 701

Query: 1341 DGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMK 1487
             G+ ++ ++  A +F   M E+    + ++   L         I++  K
Sbjct: 702  KGLRENNLLKKAFQFMDQMVEEDCNPDYITMEILTEWLPGVGEIERLRK 750


>gb|ESW32485.1| hypothetical protein PHAVU_002G326200g [Phaseolus vulgaris]
          Length = 760

 Score =  567 bits (1461), Expect = e-159
 Identities = 303/638 (47%), Positives = 419/638 (65%), Gaps = 9/638 (1%)
 Frame = +3

Query: 48   RLIKPFKPPRAASAATLRHFSADPQPSPDLSTPVSQTLSLLQITDPSSWPTNXXXXXXXX 227
            R I    P   +S    R +S+ P  + D    V+Q + LLQ    + W  +        
Sbjct: 11   RRIHRLLPSTFSSVRRCRSYSSPPLRN-DAGLTVTQVVELLQ-NPLNHW--DYDKLRPFL 66

Query: 228  XXXXXXXXKITRQLPNCQNALQFFNHLKTNSHLSDSAPLAFQAVLELTMRENPDCPGKLY 407
                     IT +L +   AL F N L   +    +    F+  LEL   ++P+   +L 
Sbjct: 67   FEASHHLLHITIRLNSIPKALDFINFLGDRTEHHQALSRVFEGALELAT-QHPNSQKELL 125

Query: 408  EL--FVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDVLNLVIAGL 581
             L  +  S      L+  +G LL+KC  +A+M+++ +++F  +D   K++++ N ++ GL
Sbjct: 126  MLHSYRKSIGGRIALTSRSGFLLLKCLGKAQMVEDSLILFKELDSSSKSSEICNELLKGL 185

Query: 582  LRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFG 761
             R G +D AL +L+EM E DS + PN  T  +VF  + ++   GRS  DEEI  LV++  
Sbjct: 186  FRSGGIDGALHVLDEMLERDSDFPPNNFTGEVVFRVLGEQERRGRSFADEEIMGLVTKLC 245

Query: 762  EHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDV--EVASCNALLTGLGQNHD 935
            EHGV    F LTQ+I + CR+     AW VLH  M  G  V  E ASCNALL GLG+  D
Sbjct: 246  EHGVFPDTFKLTQMITKLCRHRKNGVAWEVLHVVMRLGGAVAVEAASCNALLAGLGRERD 305

Query: 936  FSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMR-----DGELGVEP 1100
              RMN LM EM+E G++P+VVT+GI++ HLCK RR+DEAL+V +K+R     +  +GVEP
Sbjct: 306  IQRMNKLMAEMEEMGIKPSVVTFGILVNHLCKARRIDEALQVFDKLRGKGEGNNRVGVEP 365

Query: 1101 DVVIYNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGREL 1280
            DVV++NT IDGLCKVGR E GL L+E M+ + +  PNTITYNCLIDGFCKAG I + REL
Sbjct: 366  DVVLFNTLIDGLCKVGREEHGLSLLEEMKTKKQSRPNTITYNCLIDGFCKAGNIGKAREL 425

Query: 1281 FEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCN 1460
            + QM +EGV+ +V+T+NT+++G+CKHG V +A+EFF++M+ KGLKGN V+YTALI+AFC 
Sbjct: 426  YSQMIEEGVQPSVVTLNTMVNGLCKHGKVHNAVEFFNEMKGKGLKGNAVTYTALISAFCG 485

Query: 1461 ANNIDKAMKLFDEMRENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVG 1640
             NNIDKAM+ FD+M  +GCSPDA+VYYSLISGLS AGRMDDA+ ++S++K+AGF LD+  
Sbjct: 486  VNNIDKAMQYFDDMLSSGCSPDAIVYYSLISGLSTAGRMDDASVVVSRLKQAGFGLDLTC 545

Query: 1641 YNILIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRVMRKMI 1820
            YN+LI GFC+K KL++  E+L +ME +G+KPD VTYN L+S+    GDF  A  VM++MI
Sbjct: 546  YNVLISGFCKKKKLERVYEMLNEMEVTGVKPDIVTYNTLVSYLGKIGDFETASNVMKRMI 605

Query: 1821 DEGLTPTVVTYGALINAYCSNDHLDAAMKIFRDMRSSS 1934
             EGL P+VVTYGA+I+AYC   ++D AMKIF  M S+S
Sbjct: 606  KEGLEPSVVTYGAVIHAYCLKKNVDEAMKIFEQMCSNS 643



 Score =  177 bits (448), Expect = 2e-41
 Identities = 129/472 (27%), Positives = 219/472 (46%), Gaps = 10/472 (2%)
 Frame = +3

Query: 399  KLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTD-------- 554
            ++ +L    ++     SV    +L+    +A+ +DE + VFD +  + +  +        
Sbjct: 308  RMNKLMAEMEEMGIKPSVVTFGILVNHLCKARRIDEALQVFDKLRGKGEGNNRVGVEPDV 367

Query: 555  -VLNLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDE 731
             + N +I GL + GR +  L LLEEM +     +PNT T                     
Sbjct: 368  VLFNTLIDGLCKVGREEHGLSLLEEM-KTKKQSRPNTIT--------------------- 405

Query: 732  EIYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALL 911
              YN               CL   I  FC+ G+  KA  +  + +  G    V + N ++
Sbjct: 406  --YN---------------CL---IDGFCKAGNIGKARELYSQMIEEGVQPSVVTLNTMV 445

Query: 912  TGLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELG 1091
             GL ++           EMK KG++ N VTY  +I   C    +D+A++  + M     G
Sbjct: 446  NGLCKHGKVHNAVEFFNEMKGKGLKGNAVTYTALISAFCGVNNIDKAMQYFDDMLSS--G 503

Query: 1092 VEPDVVIYNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARG 1271
              PD ++Y + I GL   GR ++   ++ R++ ++    +   YN LI GFCK  ++ R 
Sbjct: 504  CSPDAIVYYSLISGLSTAGRMDDASVVVSRLK-QAGFGLDLTCYNVLISGFCKKKKLERV 562

Query: 1272 RELFEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITA 1451
             E+  +M+  GV+ +++T NTL+  + K G   +A      M ++GL+ +VV+Y A+I A
Sbjct: 563  YEMLNEMEVTGVKPDIVTYNTLVSYLGKIGDFETASNVMKRMIKEGLEPSVVTYGAVIHA 622

Query: 1452 FCNANNIDKAMKLFDEMRENG-CSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCL 1628
            +C   N+D+AMK+F++M  N    P+ V+Y  LI  L +   ++ A  ++  MK  G   
Sbjct: 623  YCLKKNVDEAMKIFEQMCSNSKVPPNTVIYSILIDALCKNSNVEKAVSLMDDMKIKGVRP 682

Query: 1629 DIVGYNILIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGD 1784
            +   YN +  G   K  L KA E++  M      PD VT  +L  +F + G+
Sbjct: 683  NTTTYNAIFKGVRDKKMLQKAFELMDRMIEDACSPDYVTMEILTEWFDAVGE 734


>ref|XP_004300812.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 763

 Score =  565 bits (1457), Expect = e-158
 Identities = 302/642 (47%), Positives = 428/642 (66%), Gaps = 14/642 (2%)
 Frame = +3

Query: 51   LIKPFKPPRAASAATL-RHFSADPQPSP-DLSTPVSQTLSLLQITDPSSWPTNXXXXXXX 224
            L+KP  P   +    L  H   +P  +P D  + ++Q L +LQ+  P+    N       
Sbjct: 10   LLKPQTPKSNSPFFLLTHHLCTNPISNPNDEDSIITQVLQVLQVLQPNEQHWNFPQLHTL 69

Query: 225  XXXXXXXXXK------ITRQLPNCQNALQFFNHLKTNSHLSDSAPL----AFQAVLELTM 374
                            ITR L +   AL+FF+ +  N    D        +F+A++ELT+
Sbjct: 70   LFPSSTSSPSPRTLLHITRCLASPTKALKFFDFVSQNLTPQDPPKAVLSSSFEALVELTL 129

Query: 375  RENPDCPGKLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTD 554
            R+ P     LYEL+  +KD+N P+S  A  LL++   RA M +E ++VF+ +D  +K T 
Sbjct: 130  RQPPS-ETNLYELYKMAKDRNVPISPKAVRLLVQSMRRAGMEEEALLVFNELDSALKTTF 188

Query: 555  VLNLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEE 734
            + N  I  LL+ GRVDDALK+L+EM +P++ +Q +  TVG+  S  ++    GRSV++EE
Sbjct: 189  IRNEAIGLLLKMGRVDDALKVLDEMLDPEAKFQVDDFTVGLFLSGEIR----GRSVSEEE 244

Query: 735  IYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLT 914
            I   VS+FGE  V  +   LT+++   CRN     AW VLH+ M  G  +E A CNALL+
Sbjct: 245  IVEFVSKFGERVVFPNSVVLTKLVSGLCRNRKVGLAWDVLHDVMKKGGALEAAPCNALLS 304

Query: 915  GLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGV 1094
             LG+ ++F RM  LM +M+E G++P+V+T+GI+I  LC+ RR+D A+EV EKM  G  GV
Sbjct: 305  ALGRGNEFERMRELMAKMEEMGIKPDVITFGILINRLCQSRRIDAAMEVFEKMSGGVKGV 364

Query: 1095 --EPDVVIYNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIAR 1268
              EPDV IY+T IDGLCKVGR EEGL+LME+MR +S C P+T+TYN LIDGF K G+I +
Sbjct: 365  SVEPDVGIYSTLIDGLCKVGRQEEGLRLMEKMRSQSGCAPDTVTYNILIDGFNKVGDIEK 424

Query: 1269 GRELFEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALIT 1448
            GRELF++MK+EG+ +NV T+NT+LDG+ + G +++A+EFF++M  KGLKG+ V+YT LIT
Sbjct: 425  GRELFDKMKEEGIPMNVSTLNTMLDGLSRRGRLNTALEFFNEMERKGLKGDFVTYTILIT 484

Query: 1449 AFCNANNIDKAMKLFDEMRENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCL 1628
            +FCN  NI KAM+LFD+M   GC  DA VY  LISGLSQAGRM+DA+F++SK+KEAGF +
Sbjct: 485  SFCNVTNIHKAMELFDQML-TGCPTDAKVYRRLISGLSQAGRMEDASFVVSKLKEAGFSM 543

Query: 1629 DIVGYNILIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRVM 1808
            DIV YN++I GFC +NK DK  E++++ME SG+KPD VTYN LL++   +GD   A++V 
Sbjct: 544  DIVSYNVMIHGFCSENKPDKIHEMIEEMEASGVKPDSVTYNTLLAYLGKHGDIESAYKVF 603

Query: 1809 RKMIDEGLTPTVVTYGALINAYCSNDHLDAAMKIFRDMRSSS 1934
             +M++EG+ PTVVT+G LI+A+C +  ++ AM+IFRDM S S
Sbjct: 604  DRMLNEGVVPTVVTFGTLIHAHCLDGDIEKAMRIFRDMGSKS 645



 Score =  134 bits (336), Expect = 2e-28
 Identities = 108/433 (24%), Positives = 186/433 (42%), Gaps = 39/433 (9%)
 Frame = +3

Query: 399  KLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDV------L 560
            ++ EL    ++      V    +LI    +++ +D  + VF+ +   +K   V       
Sbjct: 314  RMRELMAKMEEMGIKPDVITFGILINRLCQSRRIDAAMEVFEKMSGGVKGVSVEPDVGIY 373

Query: 561  NLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILK-------------- 698
            + +I GL + GR ++ L+L+E+M     C  P+T T  I+     K              
Sbjct: 374  STLIDGLCKVGRQEEGLRLMEKMRSQSGC-APDTVTYNILIDGFNKVGDIEKGRELFDKM 432

Query: 699  ------------------RNWCGRSVTDEEIYNLVSRFGEHGVSLSGFCLTQVIMRFCRN 824
                               +  GR  T  E +N + R G  G  ++    T +I  FC  
Sbjct: 433  KEEGIPMNVSTLNTMLDGLSRRGRLNTALEFFNEMERKGLKGDFVT---YTILITSFCNV 489

Query: 825  GDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKEMKEKGVEPNVVTY 1004
             +  KA   L + M +G   +      L++GL Q       + ++ ++KE G   ++V+Y
Sbjct: 490  TNIHKAME-LFDQMLTGCPTDAKVYRRLISGLSQAGRMEDASFVVSKLKEAGFSMDIVSY 548

Query: 1005 GIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIYNTSIDGLCKVGRHEEGLKLMERM 1184
             +MI   C   + D+  E++E+M     GV+PD V YNT +  L K G  E   K+ +RM
Sbjct: 549  NVMIHGFCSENKPDKIHEMIEEMEAS--GVKPDSVTYNTLLAYLGKHGDIESAYKVFDRM 606

Query: 1185 RLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQM-KKEGVELNVITINTLLDGMCKHG 1361
             L     P  +T+  LI   C  G+I +   +F  M  K  +  N +  + L++ +CK  
Sbjct: 607  -LNEGVVPTVVTFGTLIHAHCLDGDIEKAMRIFRDMGSKSKMPPNTVIYSDLINSLCKKN 665

Query: 1362 MVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEMRENGCSPDAVVYY 1541
             V  A+    DM+ KG++ +  +++AL       N + KA +  D+M E  C+PD +   
Sbjct: 666  DVEQALSLMEDMKAKGVRPDTQTFSALFKGLRENNLLKKAFQFMDQMVEEDCNPDYITMD 725

Query: 1542 SLISGLSQAGRMD 1580
             L   L   G  +
Sbjct: 726  ILTEWLPGVGETE 738


>ref|XP_004308336.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 883

 Score =  561 bits (1445), Expect = e-157
 Identities = 303/646 (46%), Positives = 419/646 (64%), Gaps = 8/646 (1%)
 Frame = +3

Query: 21   ICSGEPSMRRLIKPFKPPRAASAATLRHF-----SADPQPSPDLSTPVSQTLSLLQITDP 185
            + + +P + RL KP  P        L H      +++P P P  +  VS     LQ+  P
Sbjct: 6    LSASKPLLHRL-KPQTPKSKPPVFLLTHHLCTNPTSNPNPPPQ-NDDVSLATQFLQLLQP 63

Query: 186  SSWPTNXXXXXXXXXXXXXXXXKITRQLPNCQNALQFFNHLKTNSHLSDSAPLAFQAVLE 365
            +    N                            L F N    + H   SA    QAVLE
Sbjct: 64   NEKDWNFDQL----------------------QTLLFSNSTSPSPHSLSSA---LQAVLE 98

Query: 366  LTMRENPDCPGKLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMK 545
            LT+RE      KL+EL+  +K++N  L+VN   LLI+   R  M +E ++VF  +D E+K
Sbjct: 99   LTLRERIS-EKKLFELYQMAKERNVELNVNTAALLIRSLERDGMEEEGLVVFKELDSELK 157

Query: 546  NTDVLNLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVT 725
            +T + N+VI  L+  GRVDDALK+L+EM +P++ ++ +  T  IV  S+L +   GR V 
Sbjct: 158  STHIRNVVIKMLVNMGRVDDALKVLDEMLDPEAQFRVDEITADIVIGSLLGKEKKGRGVG 217

Query: 726  DEEIYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNA 905
            +EEI  LVS+FG+HGV      LT+++   CRNG   +AW VL + M  G  +E ASCNA
Sbjct: 218  EEEIVGLVSKFGKHGVFPDSRILTKLVTVLCRNGKVSRAWDVLCDVMKMGGGLEAASCNA 277

Query: 906  LLTGLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGE 1085
            +LT LG+++DF RM  +M +M+E G++PN++T+G+ + HLCK RR+D AL V EKM  G 
Sbjct: 278  VLTALGRSNDFKRMGEVMVKMEEIGIKPNLITFGLFVNHLCKSRRIDAALGVFEKMSVGV 337

Query: 1086 LGV--EPDVVI-YNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAG 1256
             GV  +PDV+I YNT IDGLCKVGR +EGL LME+MR +  C PNT+TY+CLI GF K G
Sbjct: 338  EGVSAKPDVIIIYNTLIDGLCKVGRPQEGLSLMEKMRSQDGCAPNTVTYSCLIGGFNKVG 397

Query: 1257 EIARGRELFEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYT 1436
            +I RG ELFE+MK+EG+ LNV+T+NTLLDG+C+HG +++A+EFF +M+  GLKGN VSYT
Sbjct: 398  DIDRGLELFEKMKEEGIPLNVVTLNTLLDGLCRHGRLNAALEFFKEMQRDGLKGNAVSYT 457

Query: 1437 ALITAFCNANNIDKAMKLFDEMRENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEA 1616
             LI++FC+ NNI KAM+LF++M    C  D  VY+ LIS LS AGRM+DA+F++SK+KEA
Sbjct: 458  LLISSFCDVNNISKAMELFNQMLSAECPTDVRVYHCLISCLSLAGRMEDASFVVSKLKEA 517

Query: 1617 GFCLDIVGYNILIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHA 1796
            GF +D V YN++I GF  KN  DK  E++++ME S +KPD VTYN LL++     DF  A
Sbjct: 518  GFSMDTVSYNVMIKGFSGKNMPDKIHEMIEEMEASRVKPDSVTYNTLLAYLSKARDFKGA 577

Query: 1797 HRVMRKMIDEGLTPTVVTYGALINAYCSNDHLDAAMKIFRDMRSSS 1934
            H+V+ +M+DEG+ PTVVTYG LI+A+C + ++D AM+IFRDM S S
Sbjct: 578  HKVLDRMMDEGIVPTVVTYGTLIHAHCLDGNIDKAMRIFRDMGSKS 623



 Score =  150 bits (378), Expect = 2e-33
 Identities = 121/467 (25%), Positives = 206/467 (44%), Gaps = 8/467 (1%)
 Frame = +3

Query: 465  LLIKCFSRAKMLDEMIMVFD----AIDDEMKNTDVL---NLVIAGLLRWGRVDDALKLLE 623
            L +    +++ +D  + VF+     ++      DV+   N +I GL + GR  + L L+E
Sbjct: 312  LFVNHLCKSRRIDAALGVFEKMSVGVEGVSAKPDVIIIYNTLIDGLCKVGRPQEGLSLME 371

Query: 624  EMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSLSGFCLTQV 803
            +M   D C  PNT T                                        CL   
Sbjct: 372  KMRSQDGC-APNTVTYS--------------------------------------CL--- 389

Query: 804  IMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKEMKEKGV 983
            I  F + GD D+   +  +    G  + V + N LL GL ++   +      KEM+  G+
Sbjct: 390  IGGFNKVGDIDRGLELFEKMKEEGIPLNVVTLNTLLDGLCRHGRLNAALEFFKEMQRDGL 449

Query: 984  EPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIYNTSIDGLCKVGRHEEG 1163
            + N V+Y ++I   C    + +A+E+  +M   E     DV +Y+  I  L   GR E+ 
Sbjct: 450  KGNAVSYTLLISSFCDVNNISKAMELFNQMLSAECPT--DVRVYHCLISCLSLAGRMEDA 507

Query: 1164 LKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGVELNVITINTLLD 1343
              ++ +++ E+    +T++YN +I GF       +  E+ E+M+   V+ + +T NTLL 
Sbjct: 508  SFVVSKLK-EAGFSMDTVSYNVMIKGFSGKNMPDKIHEMIEEMEASRVKPDSVTYNTLLA 566

Query: 1344 GMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEM-RENGCS 1520
             + K      A +    M ++G+   VV+Y  LI A C   NIDKAM++F +M  ++  S
Sbjct: 567  YLSKARDFKGAHKVLDRMMDEGIVPTVVTYGTLIHAHCLDGNIDKAMRIFRDMGSKSKIS 626

Query: 1521 PDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILIGGFCRKNKLDKASEI 1700
            P+ V+Y  LI+   +   ++ A  ++  MK+ G   +   +N L  G    N L+KA + 
Sbjct: 627  PNTVIYNELINSFCKNNDVEQALSLVDDMKDKGARPNTQTFNALFKGLRENNLLEKAFQF 686

Query: 1701 LKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRVMRKMIDEGLTPT 1841
            +  M     KPD  T  +L  +    G+       +RK   + L PT
Sbjct: 687  MDRMVEQACKPDYTTMEILTEWLSCVGEIER----LRKAKGKALVPT 729



 Score =  121 bits (304), Expect = 9e-25
 Identities = 95/363 (26%), Positives = 172/363 (47%), Gaps = 8/363 (2%)
 Frame = +3

Query: 423  SKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDE--MKNTDVLNLVIAGLLRWGR 596
            S+D   P +V   + LI  F++   +D  + +F+ + +E    N   LN ++ GL R GR
Sbjct: 375  SQDGCAPNTVTY-SCLIGGFNKVGDIDRGLELFEKMKEEGIPLNVVTLNTLLDGLCRHGR 433

Query: 597  VDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVS 776
            ++ AL+  +EM       + N  +  ++ SS    N   +++   E++N +         
Sbjct: 434  LNAALEFFKEMQRDG--LKGNAVSYTLLISSFCDVNNISKAM---ELFNQM--------- 479

Query: 777  LSGFCLTQVIMRFCR------NGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDF 938
            LS  C T V +  C        G  + A  V+ +   +G  ++  S N ++ G    +  
Sbjct: 480  LSAECPTDVRVYHCLISCLSLAGRMEDASFVVSKLKEAGFSMDTVSYNVMIKGFSGKNMP 539

Query: 939  SRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIYN 1118
             +++ +++EM+   V+P+ VTY  ++ +L K R    A +VL++M D   G+ P VV Y 
Sbjct: 540  DKIHEMIEEMEASRVKPDSVTYNTLLAYLSKARDFKGAHKVLDRMMDE--GIVPTVVTYG 597

Query: 1119 TSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKK 1298
            T I   C  G  ++ +++   M  +SK  PNT+ YN LI+ FCK  ++ +   L + MK 
Sbjct: 598  TLIHAHCLDGNIDKAMRIFRDMGSKSKISPNTVIYNELINSFCKNNDVEQALSLVDDMKD 657

Query: 1299 EGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDK 1478
            +G   N  T N L  G+ ++ ++  A +F   M E+  K +  +   L         I++
Sbjct: 658  KGARPNTQTFNALFKGLRENNLLEKAFQFMDRMVEQACKPDYTTMEILTEWLSCVGEIER 717

Query: 1479 AMK 1487
              K
Sbjct: 718  LRK 720


>gb|EMJ21398.1| hypothetical protein PRUPE_ppa003068mg [Prunus persica]
          Length = 607

 Score =  554 bits (1428), Expect = e-155
 Identities = 278/509 (54%), Positives = 369/509 (72%), Gaps = 5/509 (0%)
 Frame = +3

Query: 423  SKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDVLNLVIAGLLRWGRVD 602
            +K++N PL+++A  LL++      M+DE ++VF+ +D  +KNT + N  I  +L+ G VD
Sbjct: 2    AKERNIPLNISAAALLVRSLGMVGMVDEALIVFNDLDPGLKNTHLRNAAIDVMLKSGCVD 61

Query: 603  DALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSLS 782
            DALK+L+EMF P +  + +  T  IV S +LKR W GRS ++E+I  LV +FGE GV   
Sbjct: 62   DALKVLDEMFAPKAEGRVDQVTGDIVLSYLLKREWPGRSFSEEDIVGLVLKFGERGVFPD 121

Query: 783  GFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMK 962
               LT++I   CRN   +KAW VLH+ M  G DV+ ASCNALLT L + +DF RMN LM 
Sbjct: 122  SVKLTKLITALCRNRKTNKAWDVLHDVMKLGGDVKAASCNALLTCLTRCNDFKRMNELMV 181

Query: 963  EMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGE-----LGVEPDVVIYNTSI 1127
            +MKE  + P+V             RR+DEALE+ EK+ +G      +  EPDVVIYNT I
Sbjct: 182  KMKEMDIHPDVS------------RRIDEALELFEKISEGREKSDGVSTEPDVVIYNTLI 229

Query: 1128 DGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGV 1307
            DGLCKVGR EEGL+LME+MRL++ C PNT+TYNCLIDGF K G+I RG ELF QMK+EG+
Sbjct: 230  DGLCKVGRQEEGLRLMEKMRLQNGCAPNTVTYNCLIDGFNKVGDIERGCELFHQMKEEGI 289

Query: 1308 ELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMK 1487
              +VIT+NT++D +CKHG ++SA+EF ++M+  G+KGN V+Y  LIT+FCN NNI  AM+
Sbjct: 290  SPSVITLNTMVDCLCKHGRLNSAIEFLNEMQRDGVKGNAVTYATLITSFCNVNNISMAME 349

Query: 1488 LFDEMRENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILIGGFC 1667
            LF++M  +G S DA+VYYSLISGLSQAGRMDDA  ++SK+KEA F LD+V YN+LI GFC
Sbjct: 350  LFEQMLRDGGSTDAIVYYSLISGLSQAGRMDDAISVVSKLKEACFSLDLVSYNVLINGFC 409

Query: 1668 RKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRVMRKMIDEGLTPTVV 1847
            +KNKLDK  E++++ME +G+KPD VTYN L+S+FC  G+ T  HR++ KMIDEGL PT +
Sbjct: 410  KKNKLDKVHEMVQEMEAAGVKPDGVTYNTLISYFCKAGELTTGHRILSKMIDEGLVPTAI 469

Query: 1848 TYGALINAYCSNDHLDAAMKIFRDMRSSS 1934
            T+GALI+AYC N + D AMKIFR+M S S
Sbjct: 470  TFGALIHAYCLNGNTDKAMKIFREMGSKS 498



 Score =  172 bits (437), Expect = 4e-40
 Identities = 120/452 (26%), Positives = 216/452 (47%), Gaps = 11/452 (2%)
 Frame = +3

Query: 489  AKMLDEMIMVFDAIDDEMKNTD---------VLNLVIAGLLRWGRVDDALKLLEEMFEPD 641
            ++ +DE + +F+ I +  + +D         + N +I GL + GR ++ L+L+E+M   +
Sbjct: 193  SRRIDEALELFEKISEGREKSDGVSTEPDVVIYNTLIDGLCKVGRQEEGLRLMEKMRLQN 252

Query: 642  SCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSLSGFCLTQVIMRFCR 821
             C  PNT T                       YN               CL   I  F +
Sbjct: 253  GC-APNTVT-----------------------YN---------------CL---IDGFNK 270

Query: 822  NGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKEMKEKGVEPNVVT 1001
             GD ++   + H+    G    V + N ++  L ++   +     + EM+  GV+ N VT
Sbjct: 271  VGDIERGCELFHQMKEEGISPSVITLNTMVDCLCKHGRLNSAIEFLNEMQRDGVKGNAVT 330

Query: 1002 YGIMIKHLCKFRRMDEALEVLEKM-RDGELGVEPDVVIYNTSIDGLCKVGRHEEGLKLME 1178
            Y  +I   C    +  A+E+ E+M RDG      D ++Y + I GL + GR ++ + ++ 
Sbjct: 331  YATLITSFCNVNNISMAMELFEQMLRDGG---STDAIVYYSLISGLSQAGRMDDAISVVS 387

Query: 1179 RMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGVELNVITINTLLDGMCKH 1358
            +++ E+    + ++YN LI+GFCK  ++ +  E+ ++M+  GV+ + +T NTL+   CK 
Sbjct: 388  KLK-EACFSLDLVSYNVLINGFCKKNKLDKVHEMVQEMEAAGVKPDGVTYNTLISYFCKA 446

Query: 1359 GMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEM-RENGCSPDAVV 1535
            G +++     S M ++GL    +++ ALI A+C   N DKAMK+F EM  ++   P+ V+
Sbjct: 447  GELTTGHRILSKMIDEGLVPTAITFGALIHAYCLNGNTDKAMKIFREMGSKSKVPPNTVI 506

Query: 1536 YYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILIGGFCRKNKLDKASEILKDME 1715
            Y  LI  L +   ++ A  ++  MK+ G   +   +N L  G    N L+KA E +  M 
Sbjct: 507  YNILIDTLCKKNEVELAISLIDSMKDKGVRPNTATFNALFKGLKENNLLEKAFEFMDQMI 566

Query: 1716 NSGLKPDRVTYNMLLSFFCSNGDFTHAHRVMR 1811
                 PD +T  +L  +  + G+     R ++
Sbjct: 567  KHACNPDYITMEILTEWLSAVGETEKLRRFVQ 598


>ref|XP_004503311.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like isoform X2 [Cicer arietinum]
          Length = 643

 Score =  536 bits (1380), Expect = e-149
 Identities = 271/484 (55%), Positives = 350/484 (72%), Gaps = 4/484 (0%)
 Frame = +3

Query: 495  MLDEMIMVFDAIDDEMKNTDVLNLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVG 674
            MLD  ++ F+ +D   K+T V N ++ GL + GR  DAL +L++M E +S + P+  T  
Sbjct: 39   MLDVSLLRFNELDPSSKSTRVCNGLLMGLFKSGRTTDALHILDQMLELNSEFPPDDFTGE 98

Query: 675  IVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVL 854
            +VF  ++KR   G+ + DEEI  LV++ GEHGV    F LTQ+I + C       AW +L
Sbjct: 99   VVFGELVKRERPGKGLADEEIMGLVTKLGEHGVFPDTFKLTQLISKLCGKRKNCVAWELL 158

Query: 855  HEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKF 1034
            H  M  G  VE ASCNALLTGLG+  D  +MN L+ EM+E  + P+V+T+GI+I HLCK 
Sbjct: 159  HGVMKLGGPVEAASCNALLTGLGRERDIQKMNKLLAEMEELKIRPSVITFGILINHLCKA 218

Query: 1035 RRMDEALEVLEKMRD-GEL---GVEPDVVIYNTSIDGLCKVGRHEEGLKLMERMRLESKC 1202
            RR+DEAL V +K+R  GE    GVEPDVV+YNT IDGLCKVGR E+GL L+E M+ E K 
Sbjct: 219  RRIDEALGVFDKLRGKGEKNRNGVEPDVVLYNTLIDGLCKVGREEDGLSLLEEMKTEKKN 278

Query: 1203 EPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGVELNVITINTLLDGMCKHGMVSSAME 1382
             PNT+TYNCLIDGFCKAG I + RELF  M +EGV+ NV+T+NTL+ GMCK G V SA+E
Sbjct: 279  RPNTVTYNCLIDGFCKAGNIDKARELFGLMNEEGVQPNVVTLNTLVGGMCKIGRVYSAVE 338

Query: 1383 FFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEMRENGCSPDAVVYYSLISGLS 1562
            F ++M+ KGLKGN V+YTALI+AFC  NNID+AM+ FDEM  +GCSPDA+VYYSLISGLS
Sbjct: 339  FLNEMKGKGLKGNAVTYTALISAFCGVNNIDQAMQYFDEMLSSGCSPDAIVYYSLISGLS 398

Query: 1563 QAGRMDDATFILSKMKEAGFCLDIVGYNILIGGFCRKNKLDKASEILKDMENSGLKPDRV 1742
             AGRMDDA+ ++S++K AGF LD   YN+LI GFC+K KL++  E+L  ME +G+KPD V
Sbjct: 399  IAGRMDDASVVVSQLKRAGFGLDRTCYNVLISGFCKKKKLERVYEMLNQMEETGVKPDTV 458

Query: 1743 TYNMLLSFFCSNGDFTHAHRVMRKMIDEGLTPTVVTYGALINAYCSNDHLDAAMKIFRDM 1922
            TYN L+S+    GDF  A +VM KMI EGL P+VVTYGA+I+AYC   ++D AMKIF +M
Sbjct: 459  TYNTLVSYLGKAGDFAAASKVMEKMIKEGLKPSVVTYGAVIHAYCLKKNVDEAMKIFEEM 518

Query: 1923 RSSS 1934
             S+S
Sbjct: 519  CSTS 522



 Score =  178 bits (452), Expect = 7e-42
 Identities = 137/476 (28%), Positives = 223/476 (46%), Gaps = 14/476 (2%)
 Frame = +3

Query: 399  KLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNT------DVL 560
            K+ +L    ++     SV    +LI    +A+ +DE + VFD +  + +        DV+
Sbjct: 188  KMNKLLAEMEELKIRPSVITFGILINHLCKARRIDEALGVFDKLRGKGEKNRNGVEPDVV 247

Query: 561  --NLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEE 734
              N +I GL + GR +D L LLEEM + +   +PNT T                      
Sbjct: 248  LYNTLIDGLCKVGREEDGLSLLEEM-KTEKKNRPNTVT---------------------- 284

Query: 735  IYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLT 914
             YN               CL   I  FC+ G+ DKA  +       G    V + N L+ 
Sbjct: 285  -YN---------------CL---IDGFCKAGNIDKARELFGLMNEEGVQPNVVTLNTLVG 325

Query: 915  GLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGV 1094
            G+ +          + EMK KG++ N VTY  +I   C    +D+A++  ++M     G 
Sbjct: 326  GMCKIGRVYSAVEFLNEMKGKGLKGNAVTYTALISAFCGVNNIDQAMQYFDEMLSS--GC 383

Query: 1095 EPDVVIYNTSIDGLCKVGRHEEGLKLMERMR-----LESKCEPNTITYNCLIDGFCKAGE 1259
             PD ++Y + I GL   GR ++   ++ +++     L+  C      YN LI GFCK  +
Sbjct: 384  SPDAIVYYSLISGLSIAGRMDDASVVVSQLKRAGFGLDRTC------YNVLISGFCKKKK 437

Query: 1260 IARGRELFEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTA 1439
            + R  E+  QM++ GV+ + +T NTL+  + K G  ++A +    M ++GLK +VV+Y A
Sbjct: 438  LERVYEMLNQMEETGVKPDTVTYNTLVSYLGKAGDFAAASKVMEKMIKEGLKPSVVTYGA 497

Query: 1440 LITAFCNANNIDKAMKLFDEMRENGC-SPDAVVYYSLISGLSQAGRMDDATFILSKMKEA 1616
            +I A+C   N+D+AMK+F+EM       P+ V+Y  LI  L +   ++ A  ++  MK  
Sbjct: 498  VIHAYCLKKNVDEAMKIFEEMCSTSIVPPNTVIYNILIDALCKINNVEKAVSLMDDMKVK 557

Query: 1617 GFCLDIVGYNILIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGD 1784
            G   +   YN ++ G   K  L KA E++  M      PD VT  +L  +  + G+
Sbjct: 558  GVRPNTTTYNAILKGVRDKRMLHKAFELMDRMVEDACSPDYVTMEILTEWLSAVGE 613



 Score =  124 bits (311), Expect = 1e-25
 Identities = 101/379 (26%), Positives = 168/379 (44%), Gaps = 2/379 (0%)
 Frame = +3

Query: 402  LYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDE--MKNTDVLNLVIA 575
            L E+    K++   ++ N    LI  F +A  +D+   +F  +++E    N   LN ++ 
Sbjct: 269  LEEMKTEKKNRPNTVTYNC---LIDGFCKAGNIDKARELFGLMNEEGVQPNVVTLNTLVG 325

Query: 576  GLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSR 755
            G+ + GRV  A++ L EM       + N  T   + S+     +CG +  D+ +      
Sbjct: 326  GMCKIGRVYSAVEFLNEM--KGKGLKGNAVTYTALISA-----FCGVNNIDQAMQYFDEM 378

Query: 756  FGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHD 935
                G S        +I      G  D A  V+ +   +G  ++    N L++G  +   
Sbjct: 379  LSS-GCSPDAIVYYSLISGLSIAGRMDDASVVVSQLKRAGFGLDRTCYNVLISGFCKKKK 437

Query: 936  FSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIY 1115
              R+  ++ +M+E GV+P+ VTY  ++ +L K      A +V+EKM   + G++P VV Y
Sbjct: 438  LERVYEMLNQMEETGVKPDTVTYNTLVSYLGKAGDFAAASKVMEKMI--KEGLKPSVVTY 495

Query: 1116 NTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMK 1295
               I   C     +E +K+ E M   S   PNT+ YN LID  CK   + +   L + MK
Sbjct: 496  GAVIHAYCLKKNVDEAMKIFEEMCSTSIVPPNTVIYNILIDALCKINNVEKAVSLMDDMK 555

Query: 1296 KEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNID 1475
             +GV  N  T N +L G+    M+  A E    M E     + V+   L         I+
Sbjct: 556  VKGVRPNTTTYNAILKGVRDKRMLHKAFELMDRMVEDACSPDYVTMEILTEWLSAVGEIE 615

Query: 1476 KAMKLFDEMRENGCSPDAV 1532
            K +KLF E      +P ++
Sbjct: 616  K-LKLFVEGYRVSSNPSSL 633


>ref|XP_004503310.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like isoform X1 [Cicer arietinum]
          Length = 776

 Score =  536 bits (1380), Expect = e-149
 Identities = 271/484 (55%), Positives = 350/484 (72%), Gaps = 4/484 (0%)
 Frame = +3

Query: 495  MLDEMIMVFDAIDDEMKNTDVLNLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVG 674
            MLD  ++ F+ +D   K+T V N ++ GL + GR  DAL +L++M E +S + P+  T  
Sbjct: 172  MLDVSLLRFNELDPSSKSTRVCNGLLMGLFKSGRTTDALHILDQMLELNSEFPPDDFTGE 231

Query: 675  IVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVL 854
            +VF  ++KR   G+ + DEEI  LV++ GEHGV    F LTQ+I + C       AW +L
Sbjct: 232  VVFGELVKRERPGKGLADEEIMGLVTKLGEHGVFPDTFKLTQLISKLCGKRKNCVAWELL 291

Query: 855  HEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKF 1034
            H  M  G  VE ASCNALLTGLG+  D  +MN L+ EM+E  + P+V+T+GI+I HLCK 
Sbjct: 292  HGVMKLGGPVEAASCNALLTGLGRERDIQKMNKLLAEMEELKIRPSVITFGILINHLCKA 351

Query: 1035 RRMDEALEVLEKMRD-GEL---GVEPDVVIYNTSIDGLCKVGRHEEGLKLMERMRLESKC 1202
            RR+DEAL V +K+R  GE    GVEPDVV+YNT IDGLCKVGR E+GL L+E M+ E K 
Sbjct: 352  RRIDEALGVFDKLRGKGEKNRNGVEPDVVLYNTLIDGLCKVGREEDGLSLLEEMKTEKKN 411

Query: 1203 EPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGVELNVITINTLLDGMCKHGMVSSAME 1382
             PNT+TYNCLIDGFCKAG I + RELF  M +EGV+ NV+T+NTL+ GMCK G V SA+E
Sbjct: 412  RPNTVTYNCLIDGFCKAGNIDKARELFGLMNEEGVQPNVVTLNTLVGGMCKIGRVYSAVE 471

Query: 1383 FFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEMRENGCSPDAVVYYSLISGLS 1562
            F ++M+ KGLKGN V+YTALI+AFC  NNID+AM+ FDEM  +GCSPDA+VYYSLISGLS
Sbjct: 472  FLNEMKGKGLKGNAVTYTALISAFCGVNNIDQAMQYFDEMLSSGCSPDAIVYYSLISGLS 531

Query: 1563 QAGRMDDATFILSKMKEAGFCLDIVGYNILIGGFCRKNKLDKASEILKDMENSGLKPDRV 1742
             AGRMDDA+ ++S++K AGF LD   YN+LI GFC+K KL++  E+L  ME +G+KPD V
Sbjct: 532  IAGRMDDASVVVSQLKRAGFGLDRTCYNVLISGFCKKKKLERVYEMLNQMEETGVKPDTV 591

Query: 1743 TYNMLLSFFCSNGDFTHAHRVMRKMIDEGLTPTVVTYGALINAYCSNDHLDAAMKIFRDM 1922
            TYN L+S+    GDF  A +VM KMI EGL P+VVTYGA+I+AYC   ++D AMKIF +M
Sbjct: 592  TYNTLVSYLGKAGDFAAASKVMEKMIKEGLKPSVVTYGAVIHAYCLKKNVDEAMKIFEEM 651

Query: 1923 RSSS 1934
             S+S
Sbjct: 652  CSTS 655



 Score =  178 bits (452), Expect = 7e-42
 Identities = 137/476 (28%), Positives = 223/476 (46%), Gaps = 14/476 (2%)
 Frame = +3

Query: 399  KLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNT------DVL 560
            K+ +L    ++     SV    +LI    +A+ +DE + VFD +  + +        DV+
Sbjct: 321  KMNKLLAEMEELKIRPSVITFGILINHLCKARRIDEALGVFDKLRGKGEKNRNGVEPDVV 380

Query: 561  --NLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEE 734
              N +I GL + GR +D L LLEEM + +   +PNT T                      
Sbjct: 381  LYNTLIDGLCKVGREEDGLSLLEEM-KTEKKNRPNTVT---------------------- 417

Query: 735  IYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLT 914
             YN               CL   I  FC+ G+ DKA  +       G    V + N L+ 
Sbjct: 418  -YN---------------CL---IDGFCKAGNIDKARELFGLMNEEGVQPNVVTLNTLVG 458

Query: 915  GLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGV 1094
            G+ +          + EMK KG++ N VTY  +I   C    +D+A++  ++M     G 
Sbjct: 459  GMCKIGRVYSAVEFLNEMKGKGLKGNAVTYTALISAFCGVNNIDQAMQYFDEMLSS--GC 516

Query: 1095 EPDVVIYNTSIDGLCKVGRHEEGLKLMERMR-----LESKCEPNTITYNCLIDGFCKAGE 1259
             PD ++Y + I GL   GR ++   ++ +++     L+  C      YN LI GFCK  +
Sbjct: 517  SPDAIVYYSLISGLSIAGRMDDASVVVSQLKRAGFGLDRTC------YNVLISGFCKKKK 570

Query: 1260 IARGRELFEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTA 1439
            + R  E+  QM++ GV+ + +T NTL+  + K G  ++A +    M ++GLK +VV+Y A
Sbjct: 571  LERVYEMLNQMEETGVKPDTVTYNTLVSYLGKAGDFAAASKVMEKMIKEGLKPSVVTYGA 630

Query: 1440 LITAFCNANNIDKAMKLFDEMRENGC-SPDAVVYYSLISGLSQAGRMDDATFILSKMKEA 1616
            +I A+C   N+D+AMK+F+EM       P+ V+Y  LI  L +   ++ A  ++  MK  
Sbjct: 631  VIHAYCLKKNVDEAMKIFEEMCSTSIVPPNTVIYNILIDALCKINNVEKAVSLMDDMKVK 690

Query: 1617 GFCLDIVGYNILIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGD 1784
            G   +   YN ++ G   K  L KA E++  M      PD VT  +L  +  + G+
Sbjct: 691  GVRPNTTTYNAILKGVRDKRMLHKAFELMDRMVEDACSPDYVTMEILTEWLSAVGE 746



 Score =  124 bits (311), Expect = 1e-25
 Identities = 101/379 (26%), Positives = 168/379 (44%), Gaps = 2/379 (0%)
 Frame = +3

Query: 402  LYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDE--MKNTDVLNLVIA 575
            L E+    K++   ++ N    LI  F +A  +D+   +F  +++E    N   LN ++ 
Sbjct: 402  LEEMKTEKKNRPNTVTYNC---LIDGFCKAGNIDKARELFGLMNEEGVQPNVVTLNTLVG 458

Query: 576  GLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSR 755
            G+ + GRV  A++ L EM       + N  T   + S+     +CG +  D+ +      
Sbjct: 459  GMCKIGRVYSAVEFLNEM--KGKGLKGNAVTYTALISA-----FCGVNNIDQAMQYFDEM 511

Query: 756  FGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHD 935
                G S        +I      G  D A  V+ +   +G  ++    N L++G  +   
Sbjct: 512  LSS-GCSPDAIVYYSLISGLSIAGRMDDASVVVSQLKRAGFGLDRTCYNVLISGFCKKKK 570

Query: 936  FSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIY 1115
              R+  ++ +M+E GV+P+ VTY  ++ +L K      A +V+EKM   + G++P VV Y
Sbjct: 571  LERVYEMLNQMEETGVKPDTVTYNTLVSYLGKAGDFAAASKVMEKMI--KEGLKPSVVTY 628

Query: 1116 NTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMK 1295
               I   C     +E +K+ E M   S   PNT+ YN LID  CK   + +   L + MK
Sbjct: 629  GAVIHAYCLKKNVDEAMKIFEEMCSTSIVPPNTVIYNILIDALCKINNVEKAVSLMDDMK 688

Query: 1296 KEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNID 1475
             +GV  N  T N +L G+    M+  A E    M E     + V+   L         I+
Sbjct: 689  VKGVRPNTTTYNAILKGVRDKRMLHKAFELMDRMVEDACSPDYVTMEILTEWLSAVGEIE 748

Query: 1476 KAMKLFDEMRENGCSPDAV 1532
            K +KLF E      +P ++
Sbjct: 749  K-LKLFVEGYRVSSNPSSL 766


>ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Glycine max]
          Length = 746

 Score =  535 bits (1377), Expect = e-149
 Identities = 287/611 (46%), Positives = 401/611 (65%), Gaps = 10/611 (1%)
 Frame = +3

Query: 132  DLSTPVSQTLSLLQITDPSSWPTNXXXXXXXXXXXXXXXX--KITRQLPNCQNALQFFNH 305
            D ++ V+Q + LLQ+  P  W  +                  +IT QL +   +LQF  +
Sbjct: 31   DAASAVTQVVELLQLP-PDHWDHDKLHSILFNPSPLSSHHFLQITLQLSSIPKSLQFLKY 89

Query: 306  L--KTNSHLSDSAPLAFQAVLELTMRENPDCPGKLYEL--FVSSKDQNTPLSVNAGTLLI 473
            L  K   H   S    FQ  LEL  R +P+    L  L  F  S     PL+  + +LL+
Sbjct: 90   LSAKAPQHHPHSLSSVFQGSLELASR-HPNSQTHLLSLHRFRKSTHPTLPLTPKSASLLL 148

Query: 474  KCFSRAKMLDEMIMVFDAIDDEMKNTDVLNLVIAGLLRWGRVDDALKLLEEMFEPDSCYQ 653
            +C   A+++++ +++F+ +D   K+  + + ++  LL+ GR  DAL +L+EM + +S + 
Sbjct: 149  QCLENARLVNDSLLLFNQLDPSSKSPQLCHGLLRVLLKSGRAGDALHVLDEMPQANSGFS 208

Query: 654  PNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDC 833
                T  IVF  +++    GRS  D E+  LV++ GE GV   GF LTQ++ + C +   
Sbjct: 209  V---TGEIVFGELVRS---GRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKN 262

Query: 834  DKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIM 1013
              AW VLH  M  G  V+ ASCNALLT LG+  D  RMN L+ EM+++ + P+VVT+GI+
Sbjct: 263  GVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGIL 322

Query: 1014 IKHLCKFRRMDEALEVLEKMR----DGELGVEPDVVIYNTSIDGLCKVGRHEEGLKLMER 1181
            + HLCK RR+DEAL+V +++R       +GVEPDVV++NT IDGLCKVG+ E+GL L+E 
Sbjct: 323  VNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEE 382

Query: 1182 MRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGVELNVITINTLLDGMCKHG 1361
            M++ +   PNT+TYNCLIDGF KAG   R  ELF QM +EGV+ NVIT+NTL+DG+CKHG
Sbjct: 383  MKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHG 442

Query: 1362 MVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEMRENGCSPDAVVYY 1541
             V  A+EFF++M+ KGLKGN  +YTALI+AFC  NNI++AM+ F+EM  +GCSPDAVVYY
Sbjct: 443  RVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYY 502

Query: 1542 SLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILIGGFCRKNKLDKASEILKDMENS 1721
            SLISGL  AGRM+DA+ ++SK+K AGF LD   YN+LI GFC+K KL++  E+L +ME +
Sbjct: 503  SLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEET 562

Query: 1722 GLKPDRVTYNMLLSFFCSNGDFTHAHRVMRKMIDEGLTPTVVTYGALINAYCSNDHLDAA 1901
            G+KPD +TYN L+S+    GDF  A +VM KMI EGL P+VVTYGA+I+AYCS  ++D  
Sbjct: 563  GVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEG 622

Query: 1902 MKIFRDMRSSS 1934
            MKIF +M S+S
Sbjct: 623  MKIFGEMCSTS 633



 Score =  176 bits (445), Expect = 4e-41
 Identities = 132/471 (28%), Positives = 218/471 (46%), Gaps = 9/471 (1%)
 Frame = +3

Query: 399  KLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDV------- 557
            ++ EL    + +    SV    +L+    +A+ +DE + VFD +  +  +  V       
Sbjct: 299  RMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVV 358

Query: 558  -LNLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEE 734
              N +I GL + G+ +D L LLEEM +  +  +PNT T                      
Sbjct: 359  LFNTLIDGLCKVGKEEDGLSLLEEM-KMGNINRPNTVT---------------------- 395

Query: 735  IYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLT 914
             YN               CL   I  F + G+ D+A  +  +    G    V + N L+ 
Sbjct: 396  -YN---------------CL---IDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVD 436

Query: 915  GLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGV 1094
            GL ++    R      EMK KG++ N  TY  +I   C    ++ A++  E+M     G 
Sbjct: 437  GLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSS--GC 494

Query: 1095 EPDVVIYNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGR 1274
             PD V+Y + I GLC  GR  +   ++ +++L       +  YN LI GFCK  ++ R  
Sbjct: 495  SPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSC-YNVLISGFCKKKKLERVY 553

Query: 1275 ELFEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAF 1454
            EL  +M++ GV+ + IT NTL+  + K G  ++A +    M ++GL+ +VV+Y A+I A+
Sbjct: 554  ELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAY 613

Query: 1455 CNANNIDKAMKLFDEMRENG-CSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLD 1631
            C+  N+D+ MK+F EM       P+ V+Y  LI  L +   +D A  ++  MK      +
Sbjct: 614  CSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPN 673

Query: 1632 IVGYNILIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGD 1784
               YN ++ G   K  L KA E++  M     +PD +T  +L  +  + G+
Sbjct: 674  TTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGE 724



 Score =  121 bits (303), Expect = 1e-24
 Identities = 98/354 (27%), Positives = 156/354 (44%), Gaps = 2/354 (0%)
 Frame = +3

Query: 468  LIKCFSRAKMLDEMIMVFDAIDDE--MKNTDVLNLVIAGLLRWGRVDDALKLLEEMFEPD 641
            LI  F +A   D    +F  +++E    N   LN ++ GL + GRV  A++   EM    
Sbjct: 399  LIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEM--KG 456

Query: 642  SCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSLSGFCLTQVIMRFCR 821
               + N  T   + S+    N   R++   E           G S        +I   C 
Sbjct: 457  KGLKGNAATYTALISAFCGVNNINRAMQCFE------EMLSSGCSPDAVVYYSLISGLCI 510

Query: 822  NGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKEMKEKGVEPNVVT 1001
             G  + A  V+ +   +G  ++ +  N L++G  +     R+  L+ EM+E GV+P+ +T
Sbjct: 511  AGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTIT 570

Query: 1002 YGIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIYNTSIDGLCKVGRHEEGLKLMER 1181
            Y  +I +L K      A +V+EKM   + G+ P VV Y   I   C     +EG+K+   
Sbjct: 571  YNTLISYLGKTGDFATASKVMEKMI--KEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGE 628

Query: 1182 MRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGVELNVITINTLLDGMCKHG 1361
            M   SK  PNT+ YN LID  C+  ++ R   L E MK + V  N  T N +L G+    
Sbjct: 629  MCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKK 688

Query: 1362 MVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEMRENGCSP 1523
            M+  A E    M E+  + + ++   L         I+K +K F E  ++   P
Sbjct: 689  MLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEK-LKHFVEGYQDSSYP 741


>ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Cucumis sativus]
            gi|449475521|ref|XP_004154479.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  534 bits (1375), Expect = e-149
 Identities = 260/492 (52%), Positives = 363/492 (73%), Gaps = 5/492 (1%)
 Frame = +3

Query: 468  LIKCFSRAKMLDEMIMVFDAIDDEMKNTDVLNLVIAGLLRWGRVDDALKLLEEMFEPDSC 647
            L++   R  M+DE +  F  +D   KNT+V N +I  LL+ GRVD+A+ +L+EM  P+S 
Sbjct: 12   LLRRLGRIGMVDEALAAFSTLDSHAKNTNVRNEIINLLLKSGRVDNAMNVLDEMLLPESE 71

Query: 648  YQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSLSGFCLTQVIMRFCRNG 827
            ++PN  T GIVF+++LK +     V ++EI  LVS+FG+H +      LTQ+I + CR+G
Sbjct: 72   FRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSG 131

Query: 828  DCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKEMKEKGVEPNVVTYG 1007
            + + AW +L   M      + A CNALLTGLG+  +F +MNLLM++MK+  ++P V+T+G
Sbjct: 132  NTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFG 191

Query: 1008 IMIKHLCKFRRMDEALEVLEKMR----DGELGVEPDVVIYNTSIDGLCKVGRHEEGLKLM 1175
            I+I HLCKFRR+D+ALEV EKM+    + ++ V PD ++YNT IDGLCKVGR EE L LM
Sbjct: 192  ILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLM 251

Query: 1176 ERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGVELNVITINTLLDGMCK 1355
             +MR + +C P T T+NCLI+G+C++GEI    +LF +M+   +E NVIT+NTL+DGMCK
Sbjct: 252  GKMRSD-QCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCK 310

Query: 1356 HGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEMRENGCSPDAVV 1535
            H  +S+A+EFF  M++KGLKGN V+YT  I AFCN NN++KAM+  DEM ++GC PDAVV
Sbjct: 311  HNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVV 370

Query: 1536 YYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILIGGFCRKNKLDKASEILKDME 1715
            YY+LI GL+QAGR+DDA+ ++SK+KEAGFCLD V YN+LI  FC+KNKLD+A E L +ME
Sbjct: 371  YYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEME 430

Query: 1716 NSGLKPDRVTYNMLLSFFCSNGDFTHAHRVMRKMI-DEGLTPTVVTYGALINAYCSNDHL 1892
             +G+KPD VTYN L+S+F   G+F  AH+ M+KM  +EGL+PTV TYGALI+AYC N+++
Sbjct: 431  LAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNI 490

Query: 1893 DAAMKIFRDMRS 1928
            D A+KIF++M +
Sbjct: 491  DEAIKIFKEMNN 502



 Score =  181 bits (458), Expect = 1e-42
 Identities = 136/476 (28%), Positives = 223/476 (46%), Gaps = 11/476 (2%)
 Frame = +3

Query: 396  GKLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDVL----- 560
            GK+  L    KD N   +V    +LI    + + +D+ + VF+ +  E + T V      
Sbjct: 169  GKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDT 228

Query: 561  ---NLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDE 731
               N +I GL + GR ++AL L+ +M   D C  P T T                     
Sbjct: 229  IMYNTLIDGLCKVGRQEEALCLMGKM-RSDQC-APTTATFN------------------- 267

Query: 732  EIYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALL 911
                               CL   I  +CR+G+ + A  + +E  N+  +  V + N L+
Sbjct: 268  -------------------CL---INGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLV 305

Query: 912  TGLGQNHDFSRMNLLMKEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELG 1091
             G+ +++  S      + M++KG++ N VTY + I   C    M++A+E L++M     G
Sbjct: 306  DGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKD--G 363

Query: 1092 VEPDVVIYNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARG 1271
              PD V+Y T I GL + GR ++   ++ +++    C  + + YN LI  FCK  ++ R 
Sbjct: 364  CFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCL-DRVCYNVLISEFCKKNKLDRA 422

Query: 1272 RELFEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDM-REKGLKGNVVSYTALIT 1448
            +E   +M+  GV+ + +T NTL+    K G    A +F   M  E+GL   V +Y ALI 
Sbjct: 423  QEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIH 482

Query: 1449 AFCNANNIDKAMKLFDEMRE--NGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGF 1622
            A+C  NNID+A+K+F EM    +   P+ V+Y  LI  L +  +++ A  +L  MK  G 
Sbjct: 483  AYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGV 542

Query: 1623 CLDIVGYNILIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFT 1790
              +   YN +      KN LDKA +++  M      PD +T  +L  +  + G+ T
Sbjct: 543  MPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEIT 598



 Score =  129 bits (325), Expect = 3e-27
 Identities = 82/334 (24%), Positives = 152/334 (45%), Gaps = 12/334 (3%)
 Frame = +3

Query: 966  MKEKGVEPNVVTYGIMIKHLCKFRRM------DEALEVLEKMRDGELGVEPDVVIYNTSI 1127
            + E    PN  T GI+  +L K   +      DE   ++ K   G+  + PD +     I
Sbjct: 67   LPESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKF--GKHNIFPDTIALTQLI 124

Query: 1128 DGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGV 1307
              LC+ G       +++ + + +  + +    N L+ G  KA E  +   L  +MK   +
Sbjct: 125  SKLCRSGNTNLAWNILDNLMMLNGLK-DAAPCNALLTGLGKAREFGKMNLLMRKMKDMNI 183

Query: 1308 ELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNV------VSYTALITAFCNANN 1469
            +  VIT   L++ +CK   +  A+E F  M+ +  +  V      + Y  LI   C    
Sbjct: 184  QPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGR 243

Query: 1470 IDKAMKLFDEMRENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNI 1649
             ++A+ L  +MR + C+P    +  LI+G  ++G ++ A  + ++M+ A    +++  N 
Sbjct: 244  QEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNT 303

Query: 1650 LIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRVMRKMIDEG 1829
            L+ G C+ N++  A E  + M+  GLK + VTY + ++ FC+  +   A   + +M  +G
Sbjct: 304  LVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDG 363

Query: 1830 LTPTVVTYGALINAYCSNDHLDAAMKIFRDMRSS 1931
              P  V Y  LI        LD A  +   ++ +
Sbjct: 364  CFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEA 397



 Score =  100 bits (250), Expect = 2e-18
 Identities = 69/266 (25%), Positives = 131/266 (49%), Gaps = 3/266 (1%)
 Frame = +3

Query: 597  VDDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTD--EEIYNLVSRFGEHG 770
            ++ A++ L+EM + D C+        +V+ +++    CG +     ++  ++VS+  E G
Sbjct: 349  MNKAMEFLDEMSK-DGCFPD-----AVVYYTLI----CGLAQAGRLDDASSVVSKLKEAG 398

Query: 771  VSLSGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMN 950
              L   C   +I  FC+    D+A   L+E   +G   +  + N L++   +  +F   +
Sbjct: 399  FCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAH 458

Query: 951  LLMKEM-KEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIYNTSI 1127
              MK+M +E+G+ P V TYG +I   C    +DEA+++ ++M +    V P+ VIYN  I
Sbjct: 459  KFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILI 518

Query: 1128 DGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGV 1307
            D LCK  +    L L++ M+      PNT TYN +         + +  +L ++M ++  
Sbjct: 519  DSLCKQTQVNFALSLLDDMKFRGVM-PNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQAC 577

Query: 1308 ELNVITINTLLDGMCKHGMVSSAMEF 1385
              + IT+  L + +   G ++   +F
Sbjct: 578  NPDYITMEILTEWLSAVGEITKLKKF 603


>ref|NP_191711.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75183498|sp|Q9M316.1|PP292_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g61520, mitochondrial; Flags: Precursor
            gi|6850843|emb|CAB71082.1| putative protein [Arabidopsis
            thaliana] gi|332646696|gb|AEE80217.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 766

 Score =  514 bits (1324), Expect = e-143
 Identities = 276/626 (44%), Positives = 397/626 (63%), Gaps = 17/626 (2%)
 Frame = +3

Query: 96   LRHFSADPQPSPDLSTP-----VSQTLSLLQITDPSSWPTNXXXXXXXXXXXXXXXX--- 251
            LR FS D  P P++        V + +  LQ T    W ++                   
Sbjct: 23   LRRFSYDVDPRPEIKLESQEFVVVKFVKTLQKTPQHDWASSESLSALVVSSSSASPLVFS 82

Query: 252  KITRQLPNCQNALQFFNHLKTNSHL----SDSAPLAFQAVLELTMRENPDCPGKLYELFV 419
            +ITR+L +   A+ FF +L   S       +S  LA Q+V+E    E PD   KL  L+ 
Sbjct: 83   QITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSE-PDPRDKLLRLYE 141

Query: 420  SSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDVLNLVIAGLLRWGRV 599
             +K++N PL+V A  LLI+ F R  M+++ ++V++ +D  MKN+ V N+V+  LLR G V
Sbjct: 142  IAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLV 201

Query: 600  DDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSL 779
            DDA K+L+EM + +S + PN  T  IV   +    W GR +T+E+I  L+SRF  HGVS 
Sbjct: 202  DDAFKVLDEMLQKESVFPPNRITADIVLHEV----WKGRLLTEEKIIALISRFSSHGVSP 257

Query: 780  SGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLM 959
            +   LT+ I   C+N   + AW +L + M + + +E    NALL+ LG+N D SRMN L+
Sbjct: 258  NSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLV 317

Query: 960  KEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMR-----DGELGVEPDVVIYNTS 1124
             +M E  + P+VVT GI+I  LCK RR+DEALEV EKMR     DG + ++ D + +NT 
Sbjct: 318  LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNV-IKADSIHFNTL 376

Query: 1125 IDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEG 1304
            IDGLCKVGR +E  +L+ RM+LE +C PN +TYNCLIDG+C+AG++   +E+  +MK++ 
Sbjct: 377  IDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE 436

Query: 1305 VELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAM 1484
            ++ NV+T+NT++ GMC+H  ++ A+ FF DM ++G+KGNVV+Y  LI A C+ +N++KAM
Sbjct: 437  IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496

Query: 1485 KLFDEMRENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILIGGF 1664
              +++M E GCSPDA +YY+LISGL Q  R  DA  ++ K+KE GF LD++ YN+LIG F
Sbjct: 497  YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556

Query: 1665 CRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRVMRKMIDEGLTPTV 1844
            C KN  +K  E+L DME  G KPD +TYN L+SFF  + DF    R+M +M ++GL PTV
Sbjct: 557  CDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616

Query: 1845 VTYGALINAYCSNDHLDAAMKIFRDM 1922
             TYGA+I+AYCS   LD A+K+F+DM
Sbjct: 617  TTYGAVIDAYCSVGELDEALKLFKDM 642



 Score =  162 bits (411), Expect = 4e-37
 Identities = 123/463 (26%), Positives = 216/463 (46%), Gaps = 5/463 (1%)
 Frame = +3

Query: 438  TPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDV--LNLVIAGLLRWGRVDDAL 611
            TPL       L+ C  R   +  M  +   +D+     DV  L ++I  L +  RVD+AL
Sbjct: 290  TPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEAL 349

Query: 612  KLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWC--GRSVTDEEIYNLVSRFGEHGVSLSG 785
            ++ E+M    +          I F++++    C  GR    EE+  LV    E   + + 
Sbjct: 350  EVFEKMRGKRTDDGNVIKADSIHFNTLID-GLCKVGRLKEAEEL--LVRMKLEERCAPNA 406

Query: 786  FCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKE 965
                 +I  +CR G  + A  V+           V + N ++ G+ ++H  +   +   +
Sbjct: 407  VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMD 466

Query: 966  MKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIYNTSIDGLCKV 1145
            M+++GV+ NVVTY  +I   C    +++A+   EKM   E G  PD  IY   I GLC+V
Sbjct: 467  MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKML--EAGCSPDAKIYYALISGLCQV 524

Query: 1146 GRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGVELNVIT 1325
             R  + ++++E+++ E     + + YN LI  FC      +  E+   M+KEG + + IT
Sbjct: 525  RRDHDAIRVVEKLK-EGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSIT 583

Query: 1326 INTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEM- 1502
             NTL+    KH    S       MRE GL   V +Y A+I A+C+   +D+A+KLF +M 
Sbjct: 584  YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643

Query: 1503 RENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILIGGFCRKNKL 1682
              +  +P+ V+Y  LI+  S+ G    A  +  +MK      ++  YN L      K + 
Sbjct: 644  LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703

Query: 1683 DKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRVMR 1811
            +   +++ +M     +P+++T  +L+     + +     + M+
Sbjct: 704  ETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746



 Score = 72.0 bits (175), Expect = 9e-10
 Identities = 52/220 (23%), Positives = 103/220 (46%), Gaps = 4/220 (1%)
 Frame = +3

Query: 1278 LFEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFC 1457
            L+E  K++ + L V+  N L+    + GMV+ ++  +  + +  +K + V    ++    
Sbjct: 139  LYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERL-DSNMKNSQVR-NVVVDVLL 196

Query: 1458 NANNIDKAMKLFDEM--RENGCSPDAVVYYSLISGLSQAGRMDDATFI--LSKMKEAGFC 1625
                +D A K+ DEM  +E+   P+ +    ++  + +   + +   I  +S+    G  
Sbjct: 197  RNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVS 256

Query: 1626 LDIVGYNILIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRV 1805
             + V     I   C+  + + A +IL D+  +    +   +N LLS    N D +  + +
Sbjct: 257  PNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316

Query: 1806 MRKMIDEGLTPTVVTYGALINAYCSNDHLDAAMKIFRDMR 1925
            + KM +  + P VVT G LIN  C +  +D A+++F  MR
Sbjct: 317  VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356


>ref|NP_198189.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|9502152|gb|AAF88005.1| similar to a large family of
            Arabidopsis thaliana salt inducible protein-like
            proteins; contains similarity to Pfam family PF01535
            (Domain of unknown function), score=340.5, E=1.9e-98, N=2
            [Arabidopsis thaliana] gi|332006410|gb|AED93793.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 727

 Score =  509 bits (1311), Expect = e-141
 Identities = 273/626 (43%), Positives = 397/626 (63%), Gaps = 17/626 (2%)
 Frame = +3

Query: 96   LRHFSADPQPSPDLSTP-----VSQTLSLLQITDPSSWPTNXXXXXXXXXXXXXXXX--- 251
            LR FS D  P P++ +      V + +  LQ T    W ++                   
Sbjct: 23   LRRFSYDVDPRPEIKSESQEFVVVKFVKTLQNTPQHDWASSESLSALVVSSSSASPLVFS 82

Query: 252  KITRQLPNCQNALQFFNHLKTNSHL----SDSAPLAFQAVLELTMRENPDCPGKLYELFV 419
            +ITR+L +   A+ FF +L   S       +S  LA Q+V+E    E PD   KL  L+ 
Sbjct: 83   QITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSE-PDPRDKLLRLYE 141

Query: 420  SSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDVLNLVIAGLLRWGRV 599
             +K++N PL++ A  LLI+ F R  M+++ ++V++ +D  MKN+ V N+V+  LLR G V
Sbjct: 142  IAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLV 201

Query: 600  DDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSL 779
            DDA K+L+EM + +S + PN  T  IV   +    W  R +T+E+I  L+SRF  HGVS 
Sbjct: 202  DDAFKVLDEMLQKESVFPPNRITADIVLHEV----WKERLLTEEKIIALISRFSSHGVSP 257

Query: 780  SGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLM 959
            +   LT+ I   C+N   + AW +L + M + + +E    NALL+ LG+N D SRMN L+
Sbjct: 258  NSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLV 317

Query: 960  KEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMR-----DGELGVEPDVVIYNTS 1124
             +M E  + P+VVT GI+I  LCK RR+DEALEV E+MR     DG + ++ D + +NT 
Sbjct: 318  LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNV-IKADSIHFNTL 376

Query: 1125 IDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEG 1304
            IDGLCKVGR +E  +L+ RM+LE +C PN +TYNCLIDG+C+AG++   +E+  +MK++ 
Sbjct: 377  IDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE 436

Query: 1305 VELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAM 1484
            ++ NV+T+NT++ GMC+H  ++ A+ FF DM ++G+KGNVV+Y  LI A C+ +N++KAM
Sbjct: 437  IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496

Query: 1485 KLFDEMRENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILIGGF 1664
              +++M E GCSPDA +YY+LISGL Q  R  DA  ++ K+KE GF LD++ YN+LIG F
Sbjct: 497  YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556

Query: 1665 CRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRVMRKMIDEGLTPTV 1844
            C KN  +K  E+L DME  G KPD +TYN L+SFF  + DF    R+M +M ++GL PTV
Sbjct: 557  CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616

Query: 1845 VTYGALINAYCSNDHLDAAMKIFRDM 1922
             TYGA+I+AYCS   LD A+K+F+DM
Sbjct: 617  TTYGAVIDAYCSVGELDEALKLFKDM 642



 Score =  152 bits (385), Expect = 4e-34
 Identities = 119/430 (27%), Positives = 201/430 (46%), Gaps = 5/430 (1%)
 Frame = +3

Query: 438  TPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDV--LNLVIAGLLRWGRVDDAL 611
            TPL       L+ C  R   +  M  +   +D+     DV  L ++I  L +  RVD+AL
Sbjct: 290  TPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEAL 349

Query: 612  KLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWC--GRSVTDEEIYNLVSRFGEHGVSLSG 785
            ++ E+M    +          I F++++    C  GR    EE+  LV    E     + 
Sbjct: 350  EVFEQMRGKRTDDGNVIKADSIHFNTLID-GLCKVGRLKEAEEL--LVRMKLEERCVPNA 406

Query: 786  FCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKE 965
                 +I  +CR G  + A  V+           V + N ++ G+ ++H  +   +   +
Sbjct: 407  VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMD 466

Query: 966  MKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIYNTSIDGLCKV 1145
            M+++GV+ NVVTY  +I   C    +++A+   EKM   E G  PD  IY   I GLC+V
Sbjct: 467  MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKML--EAGCSPDAKIYYALISGLCQV 524

Query: 1146 GRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGVELNVIT 1325
             R  + ++++E+++ E     + + YN LI  FC      +  E+   M+KEG + + IT
Sbjct: 525  RRDHDAIRVVEKLK-EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583

Query: 1326 INTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEM- 1502
             NTL+    KH    S       MRE GL   V +Y A+I A+C+   +D+A+KLF +M 
Sbjct: 584  YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643

Query: 1503 RENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILIGGFCRKNKL 1682
              +  +P+ V+Y  LI+  S+ G    A  +  +MK      ++  YN L      K + 
Sbjct: 644  LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703

Query: 1683 DKASEILKDM 1712
            +   +++ +M
Sbjct: 704  ETLLKLMDEM 713



 Score =  100 bits (249), Expect = 2e-18
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 35/341 (10%)
 Frame = +3

Query: 486  RAKMLDEMIMVFDAIDDEMKNTDVLNLVIAGLLRWGRVDDALKLLEEMFEPDSCYQPNTN 665
            R K  +E+++     +  + N    N +I G  R G+++ A +++  M E +   +PN  
Sbjct: 385  RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE--IKPNVV 442

Query: 666  TVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSLSGFCLTQVIMRFCRNGDCDKAW 845
            TV  +   + + +    +V             + GV  +      +I   C   + +KA 
Sbjct: 443  TVNTIVGGMCRHHGLNMAVV------FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496

Query: 846  TVLHEGMNSGSDVEVASCNALLTGLGQ---NHDFSRMNLLMKE----------------- 965
                + + +G   +     AL++GL Q   +HD  R+   +KE                 
Sbjct: 497  YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556

Query: 966  ---------------MKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGVEP 1100
                           M+++G +P+ +TY  +I    K +  +    ++E+MR+   G++P
Sbjct: 557  CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED--GLDP 614

Query: 1101 DVVIYNTSIDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGREL 1280
             V  Y   ID  C VG  +E LKL + M L SK  PNT+ YN LI+ F K G   +   L
Sbjct: 615  TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674

Query: 1281 FEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMRE 1403
             E+MK + V  NV T N L   + +     + ++   +M E
Sbjct: 675  KEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715



 Score = 69.3 bits (168), Expect = 6e-09
 Identities = 50/220 (22%), Positives = 102/220 (46%), Gaps = 4/220 (1%)
 Frame = +3

Query: 1278 LFEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFC 1457
            L+E  K++ + L ++    L+    + GMV+ ++  +  + +  +K + V    ++    
Sbjct: 139  LYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERL-DSNMKNSQVR-NVVVDVLL 196

Query: 1458 NANNIDKAMKLFDEM--RENGCSPDAVVYYSLISGLSQAGRMDDATFI--LSKMKEAGFC 1625
                +D A K+ DEM  +E+   P+ +    ++  + +   + +   I  +S+    G  
Sbjct: 197  RNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVS 256

Query: 1626 LDIVGYNILIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRV 1805
             + V     I   C+  + + A +IL D+  +    +   +N LLS    N D +  + +
Sbjct: 257  PNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316

Query: 1806 MRKMIDEGLTPTVVTYGALINAYCSNDHLDAAMKIFRDMR 1925
            + KM +  + P VVT G LIN  C +  +D A+++F  MR
Sbjct: 317  VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356


>ref|NP_680234.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75174514|sp|Q9LKU8.1|PP401_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g28460 gi|9502149|gb|AAF88002.1| contains similarity
            to Pfam family PF01535 (Domain of unknown function),
            score=340.5, E=1.9e-98, N=2 [Arabidopsis thaliana]
            gi|15529206|gb|AAK97697.1| AT5g28460/F21B23_120
            [Arabidopsis thaliana] gi|27363272|gb|AAO11555.1|
            At5g28460/F21B23_120 [Arabidopsis thaliana]
            gi|332006418|gb|AED93801.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 766

 Score =  509 bits (1311), Expect = e-141
 Identities = 273/626 (43%), Positives = 397/626 (63%), Gaps = 17/626 (2%)
 Frame = +3

Query: 96   LRHFSADPQPSPDLSTP-----VSQTLSLLQITDPSSWPTNXXXXXXXXXXXXXXXX--- 251
            LR FS D  P P++ +      V + +  LQ T    W ++                   
Sbjct: 23   LRRFSYDVDPRPEIKSESQEFVVVKFVKTLQNTPQHDWASSESLSALVVSSSSASPLVFS 82

Query: 252  KITRQLPNCQNALQFFNHLKTNSHL----SDSAPLAFQAVLELTMRENPDCPGKLYELFV 419
            +ITR+L +   A+ FF +L   S       +S  LA Q+V+E    E PD   KL  L+ 
Sbjct: 83   QITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSE-PDPRDKLLRLYE 141

Query: 420  SSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDVLNLVIAGLLRWGRV 599
             +K++N PL++ A  LLI+ F R  M+++ ++V++ +D  MKN+ V N+V+  LLR G V
Sbjct: 142  IAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLV 201

Query: 600  DDALKLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWCGRSVTDEEIYNLVSRFGEHGVSL 779
            DDA K+L+EM + +S + PN  T  IV   +    W  R +T+E+I  L+SRF  HGVS 
Sbjct: 202  DDAFKVLDEMLQKESVFPPNRITADIVLHEV----WKERLLTEEKIIALISRFSSHGVSP 257

Query: 780  SGFCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLM 959
            +   LT+ I   C+N   + AW +L + M + + +E    NALL+ LG+N D SRMN L+
Sbjct: 258  NSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLV 317

Query: 960  KEMKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMR-----DGELGVEPDVVIYNTS 1124
             +M E  + P+VVT GI+I  LCK RR+DEALEV E+MR     DG + ++ D + +NT 
Sbjct: 318  LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNV-IKADSIHFNTL 376

Query: 1125 IDGLCKVGRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEG 1304
            IDGLCKVGR +E  +L+ RM+LE +C PN +TYNCLIDG+C+AG++   +E+  +MK++ 
Sbjct: 377  IDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE 436

Query: 1305 VELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAM 1484
            ++ NV+T+NT++ GMC+H  ++ A+ FF DM ++G+KGNVV+Y  LI A C+ +N++KAM
Sbjct: 437  IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496

Query: 1485 KLFDEMRENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILIGGF 1664
              +++M E GCSPDA +YY+LISGL Q  R  DA  ++ K+KE GF LD++ YN+LIG F
Sbjct: 497  YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556

Query: 1665 CRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRVMRKMIDEGLTPTV 1844
            C KN  +K  E+L DME  G KPD +TYN L+SFF  + DF    R+M +M ++GL PTV
Sbjct: 557  CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616

Query: 1845 VTYGALINAYCSNDHLDAAMKIFRDM 1922
             TYGA+I+AYCS   LD A+K+F+DM
Sbjct: 617  TTYGAVIDAYCSVGELDEALKLFKDM 642



 Score =  162 bits (409), Expect = 6e-37
 Identities = 123/463 (26%), Positives = 215/463 (46%), Gaps = 5/463 (1%)
 Frame = +3

Query: 438  TPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEMKNTDV--LNLVIAGLLRWGRVDDAL 611
            TPL       L+ C  R   +  M  +   +D+     DV  L ++I  L +  RVD+AL
Sbjct: 290  TPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEAL 349

Query: 612  KLLEEMFEPDSCYQPNTNTVGIVFSSILKRNWC--GRSVTDEEIYNLVSRFGEHGVSLSG 785
            ++ E+M    +          I F++++    C  GR    EE+  LV    E     + 
Sbjct: 350  EVFEQMRGKRTDDGNVIKADSIHFNTLID-GLCKVGRLKEAEEL--LVRMKLEERCVPNA 406

Query: 786  FCLTQVIMRFCRNGDCDKAWTVLHEGMNSGSDVEVASCNALLTGLGQNHDFSRMNLLMKE 965
                 +I  +CR G  + A  V+           V + N ++ G+ ++H  +   +   +
Sbjct: 407  VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMD 466

Query: 966  MKEKGVEPNVVTYGIMIKHLCKFRRMDEALEVLEKMRDGELGVEPDVVIYNTSIDGLCKV 1145
            M+++GV+ NVVTY  +I   C    +++A+   EKM   E G  PD  IY   I GLC+V
Sbjct: 467  MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKML--EAGCSPDAKIYYALISGLCQV 524

Query: 1146 GRHEEGLKLMERMRLESKCEPNTITYNCLIDGFCKAGEIARGRELFEQMKKEGVELNVIT 1325
             R  + ++++E+++ E     + + YN LI  FC      +  E+   M+KEG + + IT
Sbjct: 525  RRDHDAIRVVEKLK-EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583

Query: 1326 INTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFCNANNIDKAMKLFDEM- 1502
             NTL+    KH    S       MRE GL   V +Y A+I A+C+   +D+A+KLF +M 
Sbjct: 584  YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643

Query: 1503 RENGCSPDAVVYYSLISGLSQAGRMDDATFILSKMKEAGFCLDIVGYNILIGGFCRKNKL 1682
              +  +P+ V+Y  LI+  S+ G    A  +  +MK      ++  YN L      K + 
Sbjct: 644  LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703

Query: 1683 DKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRVMR 1811
            +   +++ +M     +P+++T  +L+     + +     + M+
Sbjct: 704  ETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746



 Score = 69.3 bits (168), Expect = 6e-09
 Identities = 50/220 (22%), Positives = 102/220 (46%), Gaps = 4/220 (1%)
 Frame = +3

Query: 1278 LFEQMKKEGVELNVITINTLLDGMCKHGMVSSAMEFFSDMREKGLKGNVVSYTALITAFC 1457
            L+E  K++ + L ++    L+    + GMV+ ++  +  + +  +K + V    ++    
Sbjct: 139  LYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERL-DSNMKNSQVR-NVVVDVLL 196

Query: 1458 NANNIDKAMKLFDEM--RENGCSPDAVVYYSLISGLSQAGRMDDATFI--LSKMKEAGFC 1625
                +D A K+ DEM  +E+   P+ +    ++  + +   + +   I  +S+    G  
Sbjct: 197  RNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVS 256

Query: 1626 LDIVGYNILIGGFCRKNKLDKASEILKDMENSGLKPDRVTYNMLLSFFCSNGDFTHAHRV 1805
             + V     I   C+  + + A +IL D+  +    +   +N LLS    N D +  + +
Sbjct: 257  PNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316

Query: 1806 MRKMIDEGLTPTVVTYGALINAYCSNDHLDAAMKIFRDMR 1925
            + KM +  + P VVT G LIN  C +  +D A+++F  MR
Sbjct: 317  VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356


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