BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00024043
         (1129 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH65747.1| OSIGBa0102B11.1 [Oryza sativa Indica Group]           377   e-121
dbj|BAH79971.1| hypothetical protein [Oryza sativa Indica Group]      376   e-121
emb|CAH65748.1| OSIGBa0102B11.2 [Oryza sativa Indica Group]           377   e-121
dbj|BAH80069.1| putative retrotransposon protein [Oryza sativa I...   376   e-121
emb|CAH67735.1| H0522A01.6 [Oryza sativa Indica Group] gi|116310...   376   e-121
gb|ABA96234.2| retrotransposon protein, putative, Ty3-gypsy subc...   376   e-121
emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]                376   e-121
gb|AAM93458.1| putative polyprotein [Oryza sativa Japonica Group...   376   e-121
emb|CAE05388.1| OSJNBa0022F16.12 [Oryza sativa Japonica Group]        375   e-121
gb|ABA95223.1| retrotransposon protein, putative, Ty3-gypsy subc...   375   e-120
gb|AAS98511.1| putative polyprotein [Oryza sativa Japonica Group]     375   e-120
emb|CAH66284.1| OSIGBa0161P06.1 [Oryza sativa Indica Group]           376   e-120
gb|ABB47020.1| retrotransposon protein, putative, Ty3-gypsy subc...   375   e-120
gb|AAX95143.1| retrotransposon protein, putative, Ty3-gypsy sub-...   376   e-120
emb|CAD39969.2| OSJNBa0072D08.2 [Oryza sativa Japonica Group]         375   e-120
gb|AAL83344.1|AC074282_11 Putative polyprotein [Oryza sativa Jap...   375   e-120
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e...   377   e-120
gb|AAN09852.1| putative polyprotein [Oryza sativa Japonica Group]     375   e-120
gb|ABG65971.1| retrotransposon protein, putative, Ty3-gypsy subc...   375   e-120
gb|ABA98191.1| retrotransposon protein, putative, Ty3-gypsy subc...   375   e-120

>emb|CAH65747.1| OSIGBa0102B11.1 [Oryza sativa Indica Group]
          Length = 1601

 Score =  377 bits (967), Expect(2) = e-121
 Identities = 183/314 (58%), Positives = 235/314 (74%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD  I YH GKAN VADALSRK +       +LP 
Sbjct: 1029 KSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQLPM 1088

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L KE     + ++  G ++AL   PTL D ++  Q  D DIQ IK  ++ G++ GF   
Sbjct: 1089 ELCKEFERLNLGIVSRGFVAALEAKPTLIDQVREAQVNDPDIQEIKKNMRRGKAIGFLED 1148

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++ G+R+CVP+N++L+  ILKEAH+T YS+HPGSTKMY DLK+ F W  MKR++A+
Sbjct: 1149 EQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAE 1208

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            YV+ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT++G+D+IWVI+DRL
Sbjct: 1209 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1268

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TYS  +LA+LY+  IV LHGVPK I+SDR S+FTS+FW+ ++  MG+KL
Sbjct: 1269 TKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKL 1328

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 1329 NFSTAYHPQTDGQT 1342



 Score = 86.3 bits (212), Expect(2) = e-121
 Identities = 37/54 (68%), Positives = 46/54 (85%)
 Frame = +3

Query: 18   VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
            +LMQ GKV+ YAS QL+ +EKNYPTHDLEL AVV ALKIWRHYL+G + ++YT+
Sbjct: 974  ILMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTD 1027


>dbj|BAH79971.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 1477

 Score =  376 bits (966), Expect(2) = e-121
 Identities = 184/314 (58%), Positives = 235/314 (74%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD  I YH GKAN VADALSRK +  +    +LP 
Sbjct: 905  KSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNVTEGRQLPM 964

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L KE     + +I  G ++AL   PTL D ++  Q  D DIQ IK  ++ G++ GF   
Sbjct: 965  ELCKEFERLNLGIISRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLED 1024

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++ G+R+CVP+N++L+  ILKEAH+T YS+HPGSTKMY DLK+ F W  MKR +A+
Sbjct: 1025 EQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKRKIAE 1084

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            YV+ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT++G+D+IWVI+DRL
Sbjct: 1085 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1144

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TYS  +LA+LY+  IV LHGVPK I+SDR S+FTS+FW+ ++  MG+KL
Sbjct: 1145 TKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKL 1204

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 1205 NFSTAYHPQTDGQT 1218



 Score = 86.7 bits (213), Expect(2) = e-121
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = +3

Query: 18   VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
            VLMQ GKV+ YAS QL+ +EKNYPTHDLEL AVV ALKIWRHYL+G + ++YT+
Sbjct: 850  VLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTD 903


>emb|CAH65748.1| OSIGBa0102B11.2 [Oryza sativa Indica Group]
          Length = 684

 Score =  377 bits (967), Expect(2) = e-121
 Identities = 183/314 (58%), Positives = 235/314 (74%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD  I YH GKAN VADALSRK +       +LP 
Sbjct: 112  KSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQLPM 171

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L KE     + ++  G ++AL   PTL D ++  Q  D DIQ IK  ++ G++ GF   
Sbjct: 172  ELCKEFERLNLGIVSRGFVAALEAKPTLIDQVREAQVNDPDIQEIKKNMRRGKAIGFLED 231

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++ G+R+CVP+N++L+  ILKEAH+T YS+HPGSTKMY DLK+ F W  MKR++A+
Sbjct: 232  EQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAE 291

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            YV+ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT++G+D+IWVI+DRL
Sbjct: 292  YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 351

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TYS  +LA+LY+  IV LHGVPK I+SDR S+FTS+FW+ ++  MG+KL
Sbjct: 352  TKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKL 411

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 412  NFSTAYHPQTDGQT 425



 Score = 86.3 bits (212), Expect(2) = e-121
 Identities = 37/54 (68%), Positives = 46/54 (85%)
 Frame = +3

Query: 18  VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
           +LMQ GKV+ YAS QL+ +EKNYPTHDLEL AVV ALKIWRHYL+G + ++YT+
Sbjct: 57  ILMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTD 110


>dbj|BAH80069.1| putative retrotransposon protein [Oryza sativa Indica Group]
          Length = 1475

 Score =  376 bits (965), Expect(2) = e-121
 Identities = 183/314 (58%), Positives = 235/314 (74%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD  I YH GKAN VADALSRK +       +LP 
Sbjct: 903  KSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQLPL 962

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L KE     + ++  G ++AL   PTL D ++  Q  D DIQ IK  ++ G++ GF   
Sbjct: 963  ELCKEFERLNLGIVSRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLED 1022

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++ G+R+CVP+N++L+  ILKEAH+T YS+HPGSTKMY DLK+ F W  MKR++A+
Sbjct: 1023 EQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAE 1082

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            YV+ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT++G+D+IWVI+DRL
Sbjct: 1083 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1142

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TYS  +LA+LY+  IV LHGVPK I+SDR S+FTS+FW+ ++  MG+KL
Sbjct: 1143 TKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKL 1202

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 1203 NFSTAYHPQTDGQT 1216



 Score = 86.7 bits (213), Expect(2) = e-121
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = +3

Query: 18   VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
            VLMQ GKV+ YAS QL+ +EKNYPTHDLEL AVV ALKIWRHYL+G + ++YT+
Sbjct: 848  VLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTD 901


>emb|CAH67735.1| H0522A01.6 [Oryza sativa Indica Group] gi|116310748|emb|CAH67543.1|
            H0425E08.11 [Oryza sativa Indica Group]
          Length = 1475

 Score =  376 bits (965), Expect(2) = e-121
 Identities = 183/314 (58%), Positives = 235/314 (74%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD  I YH GKAN VADALSRK +  +    +LP 
Sbjct: 903  KSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNVTEGRQLPL 962

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L KE     + ++  G ++AL   PTL D ++  Q  D DIQ IK  ++ G++ GF   
Sbjct: 963  ELCKEFERLNLGIVGRGFVAALEAKPTLIDQVREAQVNDPDIQEIKKNMRRGKAIGFLED 1022

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++ G+R+CVP+N++L+  ILKEAH T YS+HPGSTKMY DLK+ F W  MKR++A+
Sbjct: 1023 EQGTVWLGERICVPDNKDLKDAILKEAHETLYSIHPGSTKMYQDLKERFWWASMKREIAE 1082

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            YV+ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT++G+D+IWVI+DRL
Sbjct: 1083 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1142

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TYS  +LA+LY+  IV LHGVPK I+SDR S+FTS+FW+ ++  MG+KL
Sbjct: 1143 TKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKL 1202

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 1203 NFSTAYHPQTDGQT 1216



 Score = 86.7 bits (213), Expect(2) = e-121
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = +3

Query: 18   VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
            VLMQ GKV+ YAS QL+ +EKNYPTHDLEL AVV ALKIWRHYL+G + ++YT+
Sbjct: 848  VLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTD 901


>gb|ABA96234.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1407

 Score =  376 bits (965), Expect(2) = e-121
 Identities = 183/314 (58%), Positives = 235/314 (74%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD  I YH GKAN VADALSRK +       +LP 
Sbjct: 835  KSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQLPL 894

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L KE     + ++  G ++AL   PTL D ++  Q  D DIQ IK  ++ G++ GF   
Sbjct: 895  ELCKEFERLNLGIVSRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLED 954

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++ G+R+CVP+N++L+  ILKEAH+T YS+HPGSTKMY DLK+ F W  MKR++A+
Sbjct: 955  EQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAE 1014

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            YV+ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT++G+D+IWVI+DRL
Sbjct: 1015 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1074

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TYS  +LA+LY+  IV LHGVPK I+SDR S+FTS+FW+ ++  MG+KL
Sbjct: 1075 TKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKL 1134

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 1135 NFSTAYHPQTDGQT 1148



 Score = 86.7 bits (213), Expect(2) = e-121
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = +3

Query: 18  VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
           VLMQ GKV+ YAS QL+ +EKNYPTHDLEL AVV ALKIWRHYL+G + ++YT+
Sbjct: 780 VLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTD 833


>emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]
          Length = 1481

 Score =  376 bits (965), Expect(2) = e-121
 Identities = 181/314 (57%), Positives = 234/314 (74%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD EI YH GKAN VADALSRKS+  +     LP 
Sbjct: 909  KSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVADALSRKSYCNMSEGRSLPW 968

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L +E     + ++  G ++AL   PTLFD I+  Q  D DIQ IK  ++ G++ GF   
Sbjct: 969  ELCQEFEKLNLGIVSKGFMAALEAKPTLFDQIREAQVNDPDIQEIKKNMRRGKAVGFVED 1028

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++ G+R+CVP N+EL+  I+KEAH T YS+HPGSTKMY DLK  F W  M+R++A+
Sbjct: 1029 EQGTVWLGERICVPENKELKVTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRREIAE 1088

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            YV+ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT+ G+D+IWV++DRL
Sbjct: 1089 YVALCDECQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRL 1148

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TY+  +LA+LY+  +V LHGVPK I+SDR S+FTS FW+ +++ +GT+L
Sbjct: 1149 TKVAHFIPVKTTYTGHKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQSELGTRL 1208

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 1209 NFSTAYHPQTDGQT 1222



 Score = 86.3 bits (212), Expect(2) = e-121
 Identities = 39/54 (72%), Positives = 46/54 (85%)
 Frame = +3

Query: 18   VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
            VLMQ+GKV+ YAS QL+ +E NYPTHDLEL AVV ALKIWRHYLYG + +IYT+
Sbjct: 854  VLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHALKIWRHYLYGNRTEIYTD 907


>gb|AAM93458.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|31430677|gb|AAP52558.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1406

 Score =  376 bits (966), Expect(2) = e-121
 Identities = 184/314 (58%), Positives = 235/314 (74%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD  I YH GKAN VADALSRK +       +LP 
Sbjct: 834  KSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQLPL 893

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L KE     + ++  G ++AL   PTL D ++  Q  D DIQ IK  ++ G++ GF   
Sbjct: 894  ELCKEFERLNLGIVGRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLED 953

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++ G+R+CVP+N++L+  ILKEAH+T YS+HPGSTKMY DLK+ F W  MKR++A+
Sbjct: 954  EHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAE 1013

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            YV+ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT++G+D+IWVI+DRL
Sbjct: 1014 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1073

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TYS  +LA+LY+  IV LHGVPK I+SDR S+FTS+FWE ++  MG+KL
Sbjct: 1074 TKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWEKLQEEMGSKL 1133

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 1134 NFSTAYHPQTDGQT 1147



 Score = 85.9 bits (211), Expect(2) = e-121
 Identities = 37/54 (68%), Positives = 46/54 (85%)
 Frame = +3

Query: 18  VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
           VLMQ GKV+ YAS QL+ +EKNYPTHD+EL AVV ALKIWRHYL+G + ++YT+
Sbjct: 779 VLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEVYTD 832


>emb|CAE05388.1| OSJNBa0022F16.12 [Oryza sativa Japonica Group]
          Length = 1138

 Score =  375 bits (964), Expect(2) = e-121
 Identities = 183/314 (58%), Positives = 234/314 (74%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD  I YH GKAN VADALSRK +       +LP 
Sbjct: 566  KSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQLPL 625

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L KE     + ++  G ++AL   PTL D ++  Q  D DIQ IK  ++ G++ GF   
Sbjct: 626  ELCKEFERLNLGIVSRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLED 685

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++ G+R+CVP+N++L+  ILKEAH+T YS+HPGSTKMY DLK+ F W  MKR++A+
Sbjct: 686  EQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAE 745

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            YV+ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT++G+D+IWVI+DRL
Sbjct: 746  YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 805

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TYS   LA+LY+  IV LHGVPK I+SDR S+FTS+FW+ ++  MG+KL
Sbjct: 806  TKVAHFIPVKTTYSGSHLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKL 865

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 866  NFSTAYHPQTDGQT 879



 Score = 86.7 bits (213), Expect(2) = e-121
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = +3

Query: 18  VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
           VLMQ GKV+ YAS QL+ +EKNYPTHDLEL AVV ALKIWRHYL+G + ++YT+
Sbjct: 511 VLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTD 564


>gb|ABA95223.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1874

 Score =  375 bits (963), Expect(2) = e-120
 Identities = 183/314 (58%), Positives = 235/314 (74%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD  I YH GKAN VADALSRK +       +LP 
Sbjct: 1302 KSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATKGRQLPL 1361

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L KE     + ++  G ++AL   PTL D ++  Q  D DIQ IK  ++ G++ GF   
Sbjct: 1362 ELCKEFERLNLGIVGRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLED 1421

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++ G+R+CVP+N++L+  ILKEAH+T YS+HPGSTKMY DLK+ F W  MKR++A+
Sbjct: 1422 EQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAE 1481

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            YV+ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT++G+D+IWVI+DRL
Sbjct: 1482 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1541

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TYS  +LA+LY+  IV LHGVPK I+SDR S+FTS+FW+ ++  MG+KL
Sbjct: 1542 TKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKL 1601

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 1602 NFSTAYHPQTDGQT 1615



 Score = 86.7 bits (213), Expect(2) = e-120
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = +3

Query: 18   VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
            VLMQ GKV+ YAS QL+ +EKNYPTHDLEL AVV ALKIWRHYL+G + ++YT+
Sbjct: 1247 VLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTD 1300



 Score =  283 bits (724), Expect = 9e-74
 Identities = 127/206 (61%), Positives = 168/206 (81%)
 Frame = +1

Query: 496  VQEGRSEGFRISNDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDS 675
            ++ G++ GF       ++ G+R+CVP+N++L+  ILKEAH+T YS+HPGSTKMY DLK+ 
Sbjct: 1    MRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKER 60

Query: 676  FCWFGMKRDVAKYVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTN 855
            F W  MKR++A+YV+ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT++
Sbjct: 61   FWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSS 120

Query: 856  GYDAIWVIIDRLTKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHF 1035
            G+D+IWVI+DRLTK AHF+ VK TYS  +LA+LY+  IV LHGVPK I+SDR S+FTS+F
Sbjct: 121  GHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNF 180

Query: 1036 WECVKTAMGTKLRFSTAFHPQTDGQT 1113
            W+ ++  MG+KL FSTA+HPQTDGQT
Sbjct: 181  WKKLQEEMGSKLNFSTAYHPQTDGQT 206


>gb|AAS98511.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1678

 Score =  375 bits (963), Expect(2) = e-120
 Identities = 183/314 (58%), Positives = 236/314 (75%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD  I YH GKAN VADALSRK +       +LP 
Sbjct: 1106 KSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQLPL 1165

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L KE     + ++  G ++AL   PTL D ++  Q  D DIQ IK +++ G++ GF   
Sbjct: 1166 ELCKEFERLNLGIVGRGFVAALEAKPTLIDQVREAQINDPDIQEIKKKMRRGKAIGFLED 1225

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++ G+R+CVP+N++L+  ILKEAH+T YS+HPGSTKMY DLK+ F W  MKR++A+
Sbjct: 1226 EHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAE 1285

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            YV+ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT++G+D+IWVI+DRL
Sbjct: 1286 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1345

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TYS  +LA+LY+  IV LHGVPK I+SDR S+FTS+FW+ ++  MG+KL
Sbjct: 1346 TKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKL 1405

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 1406 NFSTAYHPQTDGQT 1419



 Score = 86.7 bits (213), Expect(2) = e-120
 Identities = 37/54 (68%), Positives = 47/54 (87%)
 Frame = +3

Query: 18   VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
            VLMQ+GKV+ YAS QL+ +EKNYPTHD+EL AVV ALKIWRHYL+G + ++YT+
Sbjct: 1051 VLMQEGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEVYTD 1104


>emb|CAH66284.1| OSIGBa0161P06.1 [Oryza sativa Indica Group]
          Length = 1665

 Score =  376 bits (965), Expect(2) = e-120
 Identities = 181/314 (57%), Positives = 234/314 (74%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD EI YH GKAN VADALSRKS+  +     LP 
Sbjct: 1093 KSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVADALSRKSYCNMSEGRSLPW 1152

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L +E     + ++  G ++AL   PTLFD I+  Q  D DIQ IK  ++ G++ GF   
Sbjct: 1153 ELCQEFEKLNLGIVSKGFVAALEAKPTLFDQIREAQVNDPDIQEIKKNMRRGKAIGFVED 1212

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++ G+R+CVP N+EL+  I+KEAH T YS+HPGSTKMY DLK  F W  M+R++A+
Sbjct: 1213 EQGTVWLGERICVPENKELKDTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRREIAE 1272

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            YV+ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT+ G+D+IWV++DRL
Sbjct: 1273 YVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRL 1332

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TY+  +LA+LY+  +V LHGVPK I+SDR S+FTS FW+ +++ +GT+L
Sbjct: 1333 TKVAHFIPVKTTYTGHKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQSELGTRL 1392

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 1393 NFSTAYHPQTDGQT 1406



 Score = 85.9 bits (211), Expect(2) = e-120
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = +3

Query: 18   VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
            VLMQ+GKV+ YAS QL+ +E NYPTHDLEL AVV ALKIWRHYLYG + ++YT+
Sbjct: 1038 VLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHALKIWRHYLYGNRTEVYTD 1091


>gb|ABB47020.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 989

 Score =  375 bits (963), Expect(2) = e-120
 Identities = 183/314 (58%), Positives = 234/314 (74%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD  I YH GKAN VADALSRK +       ELP 
Sbjct: 631  KSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRELPL 690

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L KE    ++ ++  G ++AL   PTL D ++  Q  D DIQ IK  ++ G++ GF   
Sbjct: 691  KLCKEFERLKLGIVSRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLED 750

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                +  G+R+CVP+N+ L+  ILKEAH+T YS+HPGSTKMY DLK+ F W  MKR++A+
Sbjct: 751  EQGTVRLGERICVPDNKNLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAE 810

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            Y++ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT++G+D+IWVI+DRL
Sbjct: 811  YIAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 870

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TYS  +LA+LY+  IV LHGVPK I+SDR S+FTS+FW+ ++  MG+KL
Sbjct: 871  TKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKL 930

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 931  NFSTAYHPQTDGQT 944



 Score = 86.7 bits (213), Expect(2) = e-120
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = +3

Query: 18  VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
           VLMQ GKV+ YAS QL+ +EKNYPTHDLEL AVV ALKIWRHYL+G + ++YT+
Sbjct: 576 VLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTD 629


>gb|AAX95143.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|77549637|gb|ABA92434.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1847

 Score =  376 bits (965), Expect(2) = e-120
 Identities = 181/314 (57%), Positives = 236/314 (75%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD  I YH GKAN VADALSRK +       +LP 
Sbjct: 1340 KSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQLPL 1399

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L KE     + ++  G ++AL   PTL D ++  Q  D DIQ IK  ++ G++ GF   
Sbjct: 1400 ELCKEFERLNLGIVSRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLED 1459

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++ G+R+CVP+N++L+  ILKEAH+T YS+HPGSTKMY DLK+ F W  MKR++A+
Sbjct: 1460 EQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAE 1519

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            YV+ C+ CQRVKAEHQ+P G+LQP++IPEWKWE++ MDFI GLPRT++G+D+IWVI+DRL
Sbjct: 1520 YVAVCVVCQRVKAEHQKPVGLLQPLKIPEWKWEELGMDFITGLPRTSSGHDSIWVIVDRL 1579

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ +K TYS  +LA+LY+  IV LHGVPK I+SDR S+FTS+FW+ ++  MG+KL
Sbjct: 1580 TKVAHFIPIKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKL 1639

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 1640 NFSTAYHPQTDGQT 1653



 Score = 85.5 bits (210), Expect(2) = e-120
 Identities = 37/54 (68%), Positives = 46/54 (85%)
 Frame = +3

Query: 18   VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
            VLMQ GKV+ YAS QL+ +EKNYPTHDLEL A+V ALKIWRHYL+G + ++YT+
Sbjct: 1285 VLMQDGKVVAYASRQLRPHEKNYPTHDLELAAMVHALKIWRHYLFGTRTEVYTD 1338


>emb|CAD39969.2| OSJNBa0072D08.2 [Oryza sativa Japonica Group]
          Length = 1712

 Score =  375 bits (962), Expect(2) = e-120
 Identities = 183/314 (58%), Positives = 234/314 (74%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD  I YH GKAN VADALSRK +       +LP 
Sbjct: 1140 KSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNTTEGRQLPL 1199

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L KE     + ++  G ++AL   PTL D ++  Q  D DIQ IK  ++ G++ GF   
Sbjct: 1200 ELCKEFERLNLGIVSRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLED 1259

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++ G+R+CVP+N++L   ILKEAH+T YS+HPGSTKMY DLK+ F W  MKR++A+
Sbjct: 1260 EQGTVWLGERICVPDNKDLNDAILKEAHDTLYSIHPGSTKMYKDLKERFWWASMKREIAE 1319

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            YV+ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT++G+D+IWVI+DRL
Sbjct: 1320 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1379

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TYS  +LA+LY+  IV LHGVPK I+SDR S+FTS+FW+ ++  MG+KL
Sbjct: 1380 TKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKL 1439

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 1440 NFSTAYHPQTDGQT 1453



 Score = 86.7 bits (213), Expect(2) = e-120
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = +3

Query: 18   VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
            VLMQ GKV+ YAS QL+ +EKNYPTHDLEL AVV ALKIWRHYL+G + ++YT+
Sbjct: 1085 VLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTD 1138


>gb|AAL83344.1|AC074282_11 Putative polyprotein [Oryza sativa Japonica Group]
            gi|20042905|gb|AAM08733.1|AC116601_26 Putative
            polyprotein [Oryza sativa Japonica Group]
            gi|31429938|gb|AAP51922.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1443

 Score =  375 bits (964), Expect(2) = e-120
 Identities = 183/314 (58%), Positives = 235/314 (74%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD  I YH GKAN VADALSRK +       +LP 
Sbjct: 871  KSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQLPL 930

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L KE     + ++  G ++AL   PTL D ++  Q  D DIQ IK  ++ G++ GF   
Sbjct: 931  ELCKEFEILNLGIVSRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLED 990

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++ G+R+CVP+N++L+  ILKEAH+T YS+HPGSTKMY DLK+ F W  MKR++A+
Sbjct: 991  EQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAE 1050

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            YV+ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT++G+D+IWVI+DRL
Sbjct: 1051 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1110

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TYS  +LA+LY+  IV LHGVPK I+SDR S+FTS+FW+ ++  MG+KL
Sbjct: 1111 TKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKL 1170

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 1171 NFSTAYHPQTDGQT 1184



 Score = 85.9 bits (211), Expect(2) = e-120
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = +3

Query: 18  VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
           VLMQ GKV+ YAS QL+ +EKNYPTHDLEL AVV ALKIWRHYL+G + ++YT+
Sbjct: 816 VLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEMYTD 869


>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1053

 Score =  377 bits (968), Expect(2) = e-120
 Identities = 182/314 (57%), Positives = 237/314 (75%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ +LN+RQRR LEL+KDYD  I YH GKAN VADALSRK++   + + +   
Sbjct: 489  KSLKYIFTQSELNLRQRRWLELIKDYDLGIHYHPGKANVVADALSRKAYCNTILVQKNQP 548

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L +E+    +E++  G ++AL + PTL   I+ KQ ED DI+ IK  ++ G++ GF   
Sbjct: 549  ELYEELKHLNLEIVNQGCVNALEVQPTLQSQIREKQLEDEDIKEIKKNMRRGKAPGFSED 608

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++FG+R+CVPN +EL++ ILKEAH +PYS+HPGSTKMY DLK+ + W  MKR++A+
Sbjct: 609  EQGTVWFGNRICVPNQQELKQSILKEAHESPYSIHPGSTKMYQDLKEKYWWVSMKREIAE 668

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            +V+ C  CQRVKAEHQRP G+LQP+ IPEWKWE+I MDFI GLPRT  G D+IWVIIDRL
Sbjct: 669  FVAHCDICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTQTGCDSIWVIIDRL 728

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TY + +LA+LYV +IV LHGVPK I+SDR S+FTS FW+ +  A+GT+L
Sbjct: 729  TKVAHFIPVKTTYQSSKLAELYVAKIVCLHGVPKKIVSDRGSQFTSRFWKSLHEALGTRL 788

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 789  NFSTAYHPQTDGQT 802



 Score = 84.3 bits (207), Expect(2) = e-120
 Identities = 37/54 (68%), Positives = 46/54 (85%)
 Frame = +3

Query: 18  VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
           VLMQ+GKV+ YAS QL+ +E NYPTHDLEL A+V ALKIWRHYL G +C+I+T+
Sbjct: 434 VLMQEGKVVAYASRQLRPHEGNYPTHDLELAAIVHALKIWRHYLIGNRCEIFTD 487


>gb|AAN09852.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1715

 Score =  375 bits (963), Expect(2) = e-120
 Identities = 183/314 (58%), Positives = 235/314 (74%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD  I YH GKAN VADALSRK +       +LP 
Sbjct: 1143 KSLKYIFTQSDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQLPL 1202

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L KE     + ++  G ++AL   PTL D ++  Q  D DIQ IK  ++ G++ GF   
Sbjct: 1203 ELCKEFERLNLGIVGRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLED 1262

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++ G+R+CVP+N++L+  ILKEAH+T YS+HPGSTKMY DLK+ F W  MKR++A+
Sbjct: 1263 EHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAE 1322

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            YV+ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT++G+D+IWVI+DRL
Sbjct: 1323 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1382

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TYS  +LA+LY+  IV LHGVPK I+SDR S+FTS+FW+ ++  MG+KL
Sbjct: 1383 TKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKL 1442

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 1443 NFSTAYHPQTDGQT 1456



 Score = 85.9 bits (211), Expect(2) = e-120
 Identities = 37/54 (68%), Positives = 46/54 (85%)
 Frame = +3

Query: 18   VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
            VLMQ GKV+ YAS QL+ +EKNYPTHD+EL AVV ALKIWRHYL+G + ++YT+
Sbjct: 1088 VLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEVYTD 1141


>gb|ABG65971.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1475

 Score =  375 bits (963), Expect(2) = e-120
 Identities = 183/314 (58%), Positives = 235/314 (74%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD  I YH GKAN VADALSRK +       +LP 
Sbjct: 903  KSLKYIFTQSDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQLPL 962

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L KE     + ++  G ++AL   PTL D ++  Q  D DIQ IK  ++ G++ GF   
Sbjct: 963  ELCKEFERLNLGIVGRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLED 1022

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++ G+R+CVP+N++L+  ILKEAH+T YS+HPGSTKMY DLK+ F W  MKR++A+
Sbjct: 1023 EHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAE 1082

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            YV+ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT++G+D+IWVI+DRL
Sbjct: 1083 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1142

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TYS  +LA+LY+  IV LHGVPK I+SDR S+FTS+FW+ ++  MG+KL
Sbjct: 1143 TKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKL 1202

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 1203 NFSTAYHPQTDGQT 1216



 Score = 85.9 bits (211), Expect(2) = e-120
 Identities = 37/54 (68%), Positives = 46/54 (85%)
 Frame = +3

Query: 18   VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
            VLMQ GKV+ YAS QL+ +EKNYPTHD+EL AVV ALKIWRHYL+G + ++YT+
Sbjct: 848  VLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEVYTD 901


>gb|ABA98191.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1412

 Score =  375 bits (963), Expect(2) = e-120
 Identities = 183/314 (58%), Positives = 235/314 (74%), Gaps = 1/314 (0%)
 Frame = +1

Query: 175  QSLKYFFTQKDLNMRQRR*LELVKDYDCEILYHFGKANRVADALSRKSFATLMSLSELPR 354
            +SLKY FTQ DLNMRQRR LEL+KDYD  I YH GKAN VADALSRK +       +LP 
Sbjct: 840  KSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQLPL 899

Query: 355  PLRKEVLDFRIEMIC-GQLSALTLTPTLFDDIQRKQEEDLDIQNIKHEVQEGRSEGFRIS 531
             L KE     + ++  G ++AL   PTL D ++  Q  D DIQ IK  ++ G++ GF   
Sbjct: 900  ELCKEFERLNLGIVGRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLED 959

Query: 532  NDEVIFFGDRLCVPNNEELRKQILKEAHNTPYSMHPGSTKMYHDLKDSFCWFGMKRDVAK 711
                ++ G+R+CVP+N++L+  ILKEAH+T YS+HPGSTKMY DLK+ F W  MKR++A+
Sbjct: 960  EQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAE 1019

Query: 712  YVSTCLTCQRVKAEHQRPRGVLQPIQIPEWKWEDIVMDFIVGLPRTTNGYDAIWVIIDRL 891
            YV+ C  CQRVKAEHQ+P G+LQP++IPEWKWE+I MDFI GLPRT++G+D+IWVI+DRL
Sbjct: 1020 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1079

Query: 892  TKSAHFLAVKMTYSTEQLAQLYVKEIVRLHGVPKIIISDRDSRFTSHFWECVKTAMGTKL 1071
            TK AHF+ VK TYS  +LA+LY+  IV LHGVPK I+SDR S+FTS+FW+ ++  MG+KL
Sbjct: 1080 TKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKL 1139

Query: 1072 RFSTAFHPQTDGQT 1113
             FSTA+HPQTDGQT
Sbjct: 1140 NFSTAYHPQTDGQT 1153



 Score = 85.9 bits (211), Expect(2) = e-120
 Identities = 37/54 (68%), Positives = 46/54 (85%)
 Frame = +3

Query: 18  VLMQKGKVIKYASSQLKDYEKNYPTHDLELVAVVFALKIWRHYLYGVKCKIYTE 179
           VLMQ GKV+ YAS QL+ +EKNYPTHD+EL AVV ALKIWRHYL+G + ++YT+
Sbjct: 785 VLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEVYTD 838