BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00023977
         (376 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008992319.1| hypothetical protein Salmi_Mp055 (mitochondr...    88   1e-15
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...    59   9e-07
ref|XP_004304923.1| PREDICTED: putative ribonuclease H protein A...    59   9e-07
ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein A...    57   2e-06

>ref|YP_008992319.1| hypothetical protein Salmi_Mp055 (mitochondrion) [Salvia
           miltiorrhiza] gi|534292292|gb|AGU16584.1| hypothetical
           protein Salmi_Mp055 (mitochondrion) [Salvia
           miltiorrhiza]
          Length = 119

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 41/87 (47%), Positives = 55/87 (63%)
 Frame = +1

Query: 1   SDSVYMVELLRKRST*VPWRHLSMWRYTLQLLSQMNLVVSHIFREDNRAADILSKTSHED 180
           SDS+Y+V LLR RS  VPW H + W YTL L+ QMN+VV+HIFRE N  AD L+  + + 
Sbjct: 31  SDSIYVVSLLRSRSMIVPWNHRNRWLYTLHLIRQMNIVVTHIFREGNHVADALANAAGDL 90

Query: 181 TWWGMPSAAIISSLTQDYVGQVNYRFV 261
            WW      I S++ +D  G   +RF+
Sbjct: 91  KWWNSMPDFISSAVYRDIAGVSFFRFI 117


>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 872

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
 Frame = +1

Query: 49   VPWRHLSMWRYTLQLLSQMNLVVSHIFREDNRAADILSK---TSHEDTWWGMPSAAIISS 219
            VPW+    W   L  +S M    SHIFRE NR AD L+    +  E+ WW +P + I+S 
Sbjct: 799  VPWQLRVRWLNCLYRISTMTFKSSHIFREGNRVADALANHGTSMSEEVWWDVPPSFILSY 858

Query: 220  LTQDYVGQVNYRF 258
              +D +G  N+RF
Sbjct: 859  YERDLLGMPNFRF 871


>ref|XP_004304923.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 209

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
 Frame = +1

Query: 1   SDSVYMVELLRKRST*VPWRHLSMWRYTLQLLSQMNLVVSHIFREDNRAADILSK---TS 171
           SDSV +V     +S   PW     W   L ++ QMN   SHIFRE N  AD ++    ++
Sbjct: 120 SDSVSVVACFSSKSFSPPWNLRVRWNNCLSIIRQMNFRCSHIFREGNMVADKMANLGLSN 179

Query: 172 HEDTWWGMPSAAIISSLTQDYVGQVNYRF 258
              TW+  P   +   L  DY+G  NYRF
Sbjct: 180 ASFTWYDNPPTELHGFLQADYLGIPNYRF 208


>ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 197

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
 Frame = +1

Query: 1   SDSVYMVELLRKRST*VPWRHLSMWRYTLQLLSQMNLVVSHIFREDNRAADILSKTSHED 180
           SDS  ++  L      VPWR  + W     +L+ M + VSHI+RE NR AD L+    ++
Sbjct: 107 SDSTLVIHFLSSFQVDVPWRFTTEWFNCRTILTSMTVKVSHIYREGNRVADCLANFGADN 166

Query: 181 T---WWGMPSAAIISSLTQDYVGQVNYRF 258
               WW       I++ ++D     NYRF
Sbjct: 167 AGVHWWDSYPPCAITAYSRDLADFPNYRF 195