BLASTX nr result

ID: Rehmannia22_contig00023958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00023958
         (584 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    65   1e-08
ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein A...    64   3e-08
ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein A...    60   4e-07
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A...    60   5e-07
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    60   5e-07
gb|EMJ14652.1| hypothetical protein PRUPE_ppa024777mg, partial [...    59   9e-07
ref|XP_003596177.1| hypothetical protein MTR_2g069220 [Medicago ...    58   2e-06
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...    56   6e-06

>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 27/77 (35%), Positives = 40/77 (51%)
 Frame = -3

Query: 237 DTRAWLHSDDGSITSKSAYTFLRPRAPLVHWGSWIWSPHIPERRSIVAWRAIHNRLAVLD 58
           D   W  S DG +++K A++FL    P VHW   +W+ + P   + + WR +HN+L   D
Sbjct: 41  DKLIWTDSVDGDLSNKLAFSFLPGHGPTVHWAKMLWNAYTPPTGAFITWRFLHNKLPTDD 100

Query: 57  VLRSRGSFTGPSVCGLC 7
            LR RG +     C  C
Sbjct: 101 NLRKRGCYIVSICCCFC 117


>ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 409

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 34/95 (35%), Positives = 50/95 (52%)
 Frame = -3

Query: 291 ILDMVRDTVRVPIAPASSDTRAWLHSDDGSITSKSAYTFLRPRAPLVHWGSWIWSPHIPE 112
           I  ++ D V + I P  SD   W+ S  G + +K A+ F+RPR P + W   IWS  I  
Sbjct: 17  ICKLIND-VPISIVPDMSDKLIWVPSSSGELLAKEAFQFMRPRLPSLDWSKLIWSKFIIP 75

Query: 111 RRSIVAWRAIHNRLAVLDVLRSRGSFTGPSVCGLC 7
           R S+ +W+ +  R+   D+L+ RG     S C LC
Sbjct: 76  RISLHSWKVLRGRVLSEDLLQRRGIVLA-SRCVLC 109


>ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 364

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 30/78 (38%), Positives = 43/78 (55%)
 Frame = -3

Query: 240 SDTRAWLHSDDGSITSKSAYTFLRPRAPLVHWGSWIWSPHIPERRSIVAWRAIHNRLAVL 61
           SD   W+    G +++K A+ FLRPR P + WG  IWS  I  R S+ +W+ +  R+   
Sbjct: 2   SDKLIWVPLSSGELSAKEAFQFLRPRLPSLDWGKLIWSKFIIPRISLHSWKVLRGRVLSE 61

Query: 60  DVLRSRGSFTGPSVCGLC 7
           D+L+ RG     S C LC
Sbjct: 62  DLLQRRG-IALASRCVLC 78


>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 751

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
 Frame = -3

Query: 285 DMVRDTVRVPIAPA-SSDTRAWLHSDDGSITSKSAYTFLRPRAPLVHWGSWIWSPHIPER 109
           D  +  + +P+     SD   W HS  G  +    Y  +RP    + W S +W   IP R
Sbjct: 423 DCAKQILEIPLPNTPESDILIWEHSSSGIFSFSDGYELVRPYFEKLDWASSVWHSFIPPR 482

Query: 108 RSIVAWRAIHNRLAVLDVLRSRGSFTGPSVCGLC 7
            S++AWR  H +L   D L+ RG     SVC LC
Sbjct: 483 YSVLAWRIFHLKLPTDDQLQRRG-IPFVSVCQLC 515


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 29/94 (30%), Positives = 48/94 (51%)
 Frame = -3

Query: 288 LDMVRDTVRVPIAPASSDTRAWLHSDDGSITSKSAYTFLRPRAPLVHWGSWIWSPHIPER 109
           L ++ + V +P+     D   W H+ +G +  + +Y F        +W   IWS  IP  
Sbjct: 66  LKLLAEKVTIPMED-KEDKLIWNHNSNGDLMMRDSYAFKNQPVNTHNWAKLIWSKDIPPS 124

Query: 108 RSIVAWRAIHNRLAVLDVLRSRGSFTGPSVCGLC 7
           +SI+ WR IH+++   + L+ RG    PS+C LC
Sbjct: 125 KSILTWRLIHDKVPTDEKLQQRGCQL-PSMCSLC 157


>gb|EMJ14652.1| hypothetical protein PRUPE_ppa024777mg, partial [Prunus persica]
          Length = 465

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 26/69 (37%), Positives = 35/69 (50%)
 Frame = -3

Query: 249 PASSDTRAWLHSDDGSITSKSAYTFLRPRAPLVHWGSWIWSPHIPERRSIVAWRAIHNRL 70
           P + D   W  S  G  ++K AY F RP+   V W   IW P I   +S +AW+ +H RL
Sbjct: 101 PGAGDLLVWAPSSSGGFSAKDAYEFTRPKFAKVPWCKLIWKPFIEPWKSFLAWKVMHGRL 160

Query: 69  AVLDVLRSR 43
              D L+ R
Sbjct: 161 LTEDFLQKR 169


>ref|XP_003596177.1| hypothetical protein MTR_2g069220 [Medicago truncatula]
           gi|355485225|gb|AES66428.1| hypothetical protein
           MTR_2g069220 [Medicago truncatula]
          Length = 107

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/66 (37%), Positives = 34/66 (51%)
 Frame = -3

Query: 237 DTRAWLHSDDGSITSKSAYTFLRPRAPLVHWGSWIWSPHIPERRSIVAWRAIHNRLAVLD 58
           D   W+HS DG +T+K A TFL P   L+ W   +W   I    S + W   H ++   +
Sbjct: 41  DKLVWIHSPDGCLTAKQAITFLLPLTVLIPWADLVWKSCITSSHSFIFWHLWHQKMLTDE 100

Query: 57  VLRSRG 40
            LRSRG
Sbjct: 101 NLRSRG 106


>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 872

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 26/76 (34%), Positives = 41/76 (53%)
 Frame = -3

Query: 267 VRVPIAPASSDTRAWLHSDDGSITSKSAYTFLRPRAPLVHWGSWIWSPHIPERRSIVAWR 88
           V + I P+  D   W  S  G +T+K A+ FL+  +P+V WG  +WS  I  R S+ AW+
Sbjct: 487 VPISINPSMEDKLIWQASSTGELTAKQAFLFLQQASPVVPWGKPLWSKFILPRMSLHAWK 546

Query: 87  AIHNRLAVLDVLRSRG 40
            +   +    +L+ RG
Sbjct: 547 VMRGTVISYHLLQRRG 562


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