BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00023715
         (1024 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004246310.1| PREDICTED: pentatricopeptide repeat-containi...   330   4e-88
ref|XP_002309173.2| pentatricopeptide repeat-containing family p...   327   6e-87
ref|XP_006429524.1| hypothetical protein CICLE_v10013613mg [Citr...   326   8e-87
ref|XP_004305097.1| PREDICTED: pentatricopeptide repeat-containi...   322   1e-85
gb|EOY07026.1| Pentatricopeptide repeat superfamily protein, put...   315   1e-83
ref|XP_003623530.1| Pentatricopeptide repeat-containing protein ...   312   1e-82
gb|EXB42398.1| hypothetical protein L484_021993 [Morus notabilis]     310   8e-82
ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containi...   299   1e-78
gb|ESW12162.1| hypothetical protein PHAVU_008G089500g [Phaseolus...   295   3e-77
gb|ESW10362.1| hypothetical protein PHAVU_009G202600g [Phaseolus...   294   4e-77
ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containi...   293   7e-77
ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containi...   293   1e-76
gb|AHB18409.1| pentatricopeptide repeat-containing protein [Goss...   276   9e-72
ref|XP_006411054.1| hypothetical protein EUTSA_v10017948mg [Eutr...   270   9e-70
ref|NP_181376.3| pentatricopeptide repeat-containing protein [Ar...   266   1e-68
gb|AAM98219.1| unknown protein [Arabidopsis thaliana] gi|3137637...   266   1e-68
ref|XP_002879744.1| pentatricopeptide repeat-containing protein ...   262   1e-67
ref|XP_006294146.1| hypothetical protein CARUB_v10023139mg [Caps...   258   2e-66
ref|XP_002533822.1| pentatricopeptide repeat-containing protein,...   251   4e-64
emb|CAN63706.1| hypothetical protein VITISV_013107 [Vitis vinifera]   225   2e-56

>ref|XP_004246310.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
            mitochondrial-like [Solanum lycopersicum]
          Length = 496

 Score =  330 bits (847), Expect = 4e-88
 Identities = 168/322 (52%), Positives = 227/322 (70%)
 Frame = +1

Query: 55   RKTKTHLLSDLVNSFSAYEVNPTPQSYHLLFKILIQKRPSNRHDQIQEILNHIEKGESFE 234
            R  KTHLLS L++SFSAYE +PTP +Y+ + K L Q  PS   D+I  IL++I K E+FE
Sbjct: 68   RSPKTHLLSILLDSFSAYECDPTPNAYYFILKTLTQN-PST-WDEIPLILDYIRKFENFE 125

Query: 235  TPECVFIDLIKFYGDTNMFNDAVELFFRLPRFRCDPXXXXXXXXXXXXCRNKMGFEMVPR 414
            TPE +F  LIKFYGD+NM + A E+FF +P +RC+P            C+N     +V +
Sbjct: 126  TPEYIFTYLIKFYGDSNMTHLAYEMFFTMPAYRCNPSVKSLNCLIWVLCKNNYDLRIVLQ 185

Query: 415  VLLKSQVMKIRFEESSFGILIKALCKTGSVSNAFELVNQMVDEGFGLDQKICSLMLATMC 594
            VL+KSQ++ I  EES+F ILI+ALC+ G  +NA +L+  MVD GF LD  ICSL+L+TM 
Sbjct: 186  VLVKSQLLNIWVEESTFKILIRALCRIGKTNNAVDLLKLMVDSGFNLDANICSLILSTMP 245

Query: 595  RQLNCNVGEIMGFMEDLKKLGFEPRKDDLCNVIRFLVKKGKGIESLELLKQMKMNGVKPD 774
               +C   EI G +E+++KLG+ P++ DLCNVIRF V  GKGI++LE+L +MKM G+ PD
Sbjct: 246  DVKDCVGVEIWGVLEEMRKLGYSPKRVDLCNVIRFYVNNGKGIDALEVLNKMKMCGMVPD 305

Query: 775  IMCYNLVLDGLIHNRDFSRADKVFDELLVLGLAPDIYTYNVYISGLFMQKKVDDGIKTLN 954
            ++CYNLVL+GLI   ++S AD++FDELLVLGL PDI TYNVYI+GL  Q K+ + ++ L 
Sbjct: 306  VVCYNLVLNGLIFEGEYSNADELFDELLVLGLNPDIVTYNVYINGLCKQDKMVEALRVLG 365

Query: 955  SMEELGCAPDSSTYSAILRALC 1020
             ME+LGC P+ +TY  IL  LC
Sbjct: 366  CMEDLGCKPEMNTYHTILDGLC 387


>ref|XP_002309173.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550335936|gb|EEE92696.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 490

 Score =  327 bits (837), Expect = 6e-87
 Identities = 165/348 (47%), Positives = 233/348 (66%), Gaps = 7/348 (2%)
 Frame = +1

Query: 1    WDQIFAFRLAKQSFKQSIRK-------TKTHLLSDLVNSFSAYEVNPTPQSYHLLFKILI 159
            W +IF  + A QS KQS  K        K HLLS L++SFS Y+V P P+++  +FK L+
Sbjct: 29   WHRIFNQQQAMQSLKQSALKPPQQESPNKPHLLSSLIHSFSIYDVEPAPKAFDFIFKTLV 88

Query: 160  QKRPSNRHDQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFNDAVELFFRLPRFRCD 339
            +   +++   I  +L+H+EK ESFE PE  F  LI+ YG TN  ++A+ELF+R+P+FRC 
Sbjct: 89   K---TSQFHHIPSVLDHLEKVESFEPPESTFAYLIEVYGRTNKTHEAIELFYRIPKFRCV 145

Query: 340  PXXXXXXXXXXXXCRNKMGFEMVPRVLLKSQVMKIRFEESSFGILIKALCKTGSVSNAFE 519
            P            CRN  G ++VP +LLKSQVM IR EES+F +LI ALC+   V  A E
Sbjct: 146  PSVYSLNTLISVLCRNSKGLKLVPEILLKSQVMNIRVEESTFQVLITALCRIRKVGFAIE 205

Query: 520  LVNQMVDEGFGLDQKICSLMLATMCRQLNCNVGEIMGFMEDLKKLGFEPRKDDLCNVIRF 699
            ++N MV++GF ++ +I SL+L+ +C Q +    E++GF+E L+KLGF P   D  NVIRF
Sbjct: 206  MLNCMVNDGFIVNAEIYSLLLSCLCEQKDATKFEVIGFLEQLRKLGFFPGMVDYSNVIRF 265

Query: 700  LVKKGKGIESLELLKQMKMNGVKPDIMCYNLVLDGLIHNRDFSRADKVFDELLVLGLAPD 879
            LVK  +G+++L +L  MK + +KPDI CY +VL G+I ++D+ +AD++FDELLV GL PD
Sbjct: 266  LVKGKRGLDALHVLNHMKSDRIKPDIFCYTMVLHGVIEDKDYLKADELFDELLVFGLVPD 325

Query: 880  IYTYNVYISGLFMQKKVDDGIKTLNSMEELGCAPDSSTYSAILRALCE 1023
             YTYNVYI+GL  Q  V  GIK + SMEELGC P+  TY+ +++ LC+
Sbjct: 326  AYTYNVYINGLCKQNNVQAGIKMVASMEELGCKPNLITYNMLVKQLCK 373


>ref|XP_006429524.1| hypothetical protein CICLE_v10013613mg [Citrus clementina]
            gi|557531581|gb|ESR42764.1| hypothetical protein
            CICLE_v10013613mg [Citrus clementina]
          Length = 506

 Score =  326 bits (836), Expect = 8e-87
 Identities = 166/351 (47%), Positives = 234/351 (66%), Gaps = 10/351 (2%)
 Frame = +1

Query: 1    WDQIFAFRLAKQSFKQSIRKTKT----------HLLSDLVNSFSAYEVNPTPQSYHLLFK 150
            W Q    + AKQ+ KQS+    T          H+LS L++SFS Y   P P++YH + K
Sbjct: 29   WHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIK 88

Query: 151  ILIQKRPSNRHDQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFNDAVELFFRLPRF 330
             L +   +++   I  +L+HIEK E+FETPE +FIDLIK Y D + F D+V LF+++P+F
Sbjct: 89   TLAE---NSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKF 145

Query: 331  RCDPXXXXXXXXXXXXCRNKMGFEMVPRVLLKSQVMKIRFEESSFGILIKALCKTGSVSN 510
            RC P            CRNK   +MVP++LLKSQ+M IR EESSF ILI  LC+   V  
Sbjct: 146  RCVPSVYSLNALLSVLCRNKEWVKMVPQILLKSQLMNIRIEESSFRILISTLCRINRVGF 205

Query: 511  AFELVNQMVDEGFGLDQKICSLMLATMCRQLNCNVGEIMGFMEDLKKLGFEPRKDDLCNV 690
            A E++N M+++GF +D K CS +L+++C Q + +  E++GF++++KKLGF     D  NV
Sbjct: 206  AIEILNCMINDGFCVDGKTCSWILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 265

Query: 691  IRFLVKKGKGIESLELLKQMKMNGVKPDIMCYNLVLDGLIHNRDFSRADKVFDELLVLGL 870
            IR LVKK K  ++L +L QMK +G+KPDI+CY +VL+G+I   D+ +A+++FDELLVLGL
Sbjct: 266  IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 325

Query: 871  APDIYTYNVYISGLFMQKKVDDGIKTLNSMEELGCAPDSSTYSAILRALCE 1023
             PD+YTYNVYI+GL  Q  V+ GIK +  MEELG  PD  TY+ +L+ALC+
Sbjct: 326  VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 376



 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 44/184 (23%), Positives = 84/184 (45%)
 Frame = +1

Query: 472  LIKALCKTGSVSNAFELVNQMVDEGFGLDQKICSLMLATMCRQLNCNVGEIMGFMEDLKK 651
            +I++L K   V +A  ++NQM  +G   D    +++L  +  Q +    E +   ++L  
Sbjct: 265  VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL--FDELLV 322

Query: 652  LGFEPRKDDLCNVIRFLVKKGKGIESLELLKQMKMNGVKPDIMCYNLVLDGLIHNRDFSR 831
            LG  P        I  L K+      ++++  M+  G KPD++ YN +L  L   R+ +R
Sbjct: 323  LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 382

Query: 832  ADKVFDELLVLGLAPDIYTYNVYISGLFMQKKVDDGIKTLNSMEELGCAPDSSTYSAILR 1011
              ++  E+   G+  ++ TY++ I GL  +  + +    L      G    SS +   + 
Sbjct: 383  LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 442

Query: 1012 ALCE 1023
             LC+
Sbjct: 443  GLCQ 446


>ref|XP_004305097.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 491

 Score =  322 bits (826), Expect = 1e-85
 Identities = 159/341 (46%), Positives = 228/341 (66%)
 Frame = +1

Query: 1    WDQIFAFRLAKQSFKQSIRKTKTHLLSDLVNSFSAYEVNPTPQSYHLLFKILIQKRPSNR 180
            W ++F    A Q+ K S       LLS L++SF+ +  +PTP++Y+ + K L +   +++
Sbjct: 30   WHKLFNQHQALQTLKHSPLNPPQTLLSTLIHSFNTFNCDPTPEAYNFVLKTLFK---TSQ 86

Query: 181  HDQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFNDAVELFFRLPRFRCDPXXXXXX 360
               I  +L+ +E  E F  PE +F +LI+FYG  N   DA+++F R+P+FRCDP      
Sbjct: 87   LSHIPSVLDRLESIEKFHPPESIFANLIRFYGSANRVEDAIDVFCRIPKFRCDPSAVSLN 146

Query: 361  XXXXXXCRNKMGFEMVPRVLLKSQVMKIRFEESSFGILIKALCKTGSVSNAFELVNQMVD 540
                  C +  G +MVP+VL+ S+ M IR EESSF ILI ALC+ GSV  A E++  M+ 
Sbjct: 147  SLLYVLCGSSEGLKMVPQVLMNSRAMGIRLEESSFRILISALCRIGSVGYAIEIMKCMIS 206

Query: 541  EGFGLDQKICSLMLATMCRQLNCNVGEIMGFMEDLKKLGFEPRKDDLCNVIRFLVKKGKG 720
             G+ LD KICSL+L+++C Q      E++GF+E++KK+GF P   D  NVIR LVK+GKG
Sbjct: 207  NGYDLDVKICSLVLSSLCEQKGVGGLEVVGFVEEMKKVGFCPGMLDYSNVIRCLVKQGKG 266

Query: 721  IESLELLKQMKMNGVKPDIMCYNLVLDGLIHNRDFSRADKVFDELLVLGLAPDIYTYNVY 900
            +++L +L +MK+ G+KPDI+CY +VL G+I N D+  ADKVFDELLVLGL PD+YTYNVY
Sbjct: 267  LDALRVLCKMKVEGMKPDIVCYTMVLYGVIANGDYKNADKVFDELLVLGLVPDVYTYNVY 326

Query: 901  ISGLFMQKKVDDGIKTLNSMEELGCAPDSSTYSAILRALCE 1023
            I+GL  Q  V+ GIK +  M+ELGC P+  TY+ +L+ALC+
Sbjct: 327  INGLCNQNNVEAGIKMITCMDELGCRPNLITYNLLLKALCK 367


>gb|EOY07026.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
            cacao]
          Length = 542

 Score =  315 bits (808), Expect = 1e-83
 Identities = 158/346 (45%), Positives = 225/346 (65%), Gaps = 5/346 (1%)
 Frame = +1

Query: 1    WDQIFAFRLAKQSFKQSIRKTKTHL-----LSDLVNSFSAYEVNPTPQSYHLLFKILIQK 165
            W+Q F  + A  SFKQ +   + +L     LS LV SFS Y V+PTPQ+YH L K LIQ 
Sbjct: 72   WNQTFTQKQAMLSFKQLVAVAQDNLPPPILLSTLVRSFSLYNVHPTPQAYHFLIKTLIQN 131

Query: 166  RPSNRHDQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFNDAVELFFRLPRFRCDPX 345
               N    I  +L+H+E  E F+TPE +F DLI  YG  N   DAV++F+R+P+FRC P 
Sbjct: 132  LHFNH---IPSVLHHLEHVEKFQTPEYIFADLITTYGIANRIQDAVDIFYRIPKFRCVPS 188

Query: 346  XXXXXXXXXXXCRNKMGFEMVPRVLLKSQVMKIRFEESSFGILIKALCKTGSVSNAFELV 525
                       CRN+   ++VP+VLLKS +M IR EES+  IL+ ALC+   VS A +++
Sbjct: 189  AYSLNSLLALLCRNQYSLKLVPQVLLKSLLMNIRVEESTLRILVSALCRMNKVSYAIDIL 248

Query: 526  NQMVDEGFGLDQKICSLMLATMCRQLNCNVGEIMGFMEDLKKLGFEPRKDDLCNVIRFLV 705
             +M+DEG G++ K+CS +L+++C + + +  ++MG   +L KLGF P   D   +IRFLV
Sbjct: 249  QRMIDEGLGVNDKVCSFILSSICAKADLDGEDVMGLWRELGKLGFCPAMSDYNCLIRFLV 308

Query: 706  KKGKGIESLELLKQMKMNGVKPDIMCYNLVLDGLIHNRDFSRADKVFDELLVLGLAPDIY 885
            KKG+G+++L+ L QMK  G+KP I+ Y + L+G+I   D+  AD++FDELL+LGL PD+Y
Sbjct: 309  KKGRGLDALDFLNQMKSVGIKPGIVSYTMALNGVIAEGDYMLADELFDELLMLGLVPDVY 368

Query: 886  TYNVYISGLFMQKKVDDGIKTLNSMEELGCAPDSSTYSAILRALCE 1023
            TYN YI  L  Q KV++GIK +  MEEL C P+  TY+ +L A+C+
Sbjct: 369  TYNAYIDALCKQNKVEEGIKMVACMEELRCKPNVLTYNMLLEAICK 414


>ref|XP_003623530.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355498545|gb|AES79748.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 653

 Score =  312 bits (800), Expect = 1e-82
 Identities = 153/316 (48%), Positives = 217/316 (68%)
 Frame = +1

Query: 73   LLSDLVNSFSAYEVNPTPQSYHLLFKILIQKRPSNRHDQIQEILNHIEKGESFETPECVF 252
            LLS L++SF AY  +P+P++Y  L K +     S+ H+ I  ILNH+E  E FETPE +F
Sbjct: 57   LLSTLIHSFKAYHTDPSPKAYFFLIKTITNINTSHLHE-IPHILNHLEHNEKFETPEFIF 115

Query: 253  IDLIKFYGDTNMFNDAVELFFRLPRFRCDPXXXXXXXXXXXXCRNKMGFEMVPRVLLKSQ 432
            + LI+FYG  +   DAV+LFFR+PRFRC P            C  +    MVP +LLKS+
Sbjct: 116  MYLIRFYGFNDRVQDAVDLFFRIPRFRCTPTVCSLNLLLSLLCGKRECLRMVPDILLKSR 175

Query: 433  VMKIRFEESSFGILIKALCKTGSVSNAFELVNQMVDEGFGLDQKICSLMLATMCRQLNCN 612
             MKIR EESSF +LIKALC+   V  A +++N MV++G+ LD KICSL+++++C Q +  
Sbjct: 176  DMKIRLEESSFWVLIKALCRIKRVDYAIKMMNCMVEDGYCLDDKICSLIISSLCEQNDLT 235

Query: 613  VGEIMGFMEDLKKLGFEPRKDDLCNVIRFLVKKGKGIESLELLKQMKMNGVKPDIMCYNL 792
              E +    +++KLGF P   D  N+IRFLVK+GKG+++LE+L Q+K +G+KPDI+CY +
Sbjct: 236  SVEALVVWGNMRKLGFCPGVMDCTNMIRFLVKEGKGMDALEILNQLKEDGIKPDIVCYTI 295

Query: 793  VLDGLIHNRDFSRADKVFDELLVLGLAPDIYTYNVYISGLFMQKKVDDGIKTLNSMEELG 972
            VL G++   D+ + D++FDE+LVLGL PD+YTYNVYI+GL  Q   D+ +K + SME+LG
Sbjct: 296  VLSGIVKEGDYVKLDELFDEILVLGLVPDVYTYNVYINGLCKQNNFDEALKIVVSMEKLG 355

Query: 973  CAPDSSTYSAILRALC 1020
            C P+  TY+ +L ALC
Sbjct: 356  CKPNVVTYNTLLGALC 371



 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 45/184 (24%), Positives = 96/184 (52%)
 Frame = +1

Query: 472  LIKALCKTGSVSNAFELVNQMVDEGFGLDQKICSLMLATMCRQLNCNVGEIMGFMEDLKK 651
            +I+ L K G   +A E++NQ+ ++G   D    +++L+ + ++   +  ++    +++  
Sbjct: 261  MIRFLVKEGKGMDALEILNQLKEDGIKPDIVCYTIVLSGIVKE--GDYVKLDELFDEILV 318

Query: 652  LGFEPRKDDLCNVIRFLVKKGKGIESLELLKQMKMNGVKPDIMCYNLVLDGLIHNRDFSR 831
            LG  P        I  L K+    E+L+++  M+  G KP+++ YN +L  L  + D  +
Sbjct: 319  LGLVPDVYTYNVYINGLCKQNNFDEALKIVVSMEKLGCKPNVVTYNTLLGALCMSGDLGK 378

Query: 832  ADKVFDELLVLGLAPDIYTYNVYISGLFMQKKVDDGIKTLNSMEELGCAPDSSTYSAILR 1011
            A +V  E+ + G+  +++TY + + GL  + ++ +    L  M E    P SST+ +I+ 
Sbjct: 379  AKRVMKEMRLKGVELNLHTYRIMLDGLVGKGEIGEACVLLEEMLEKCFYPRSSTFDSIVH 438

Query: 1012 ALCE 1023
             +C+
Sbjct: 439  QMCQ 442


>gb|EXB42398.1| hypothetical protein L484_021993 [Morus notabilis]
          Length = 494

 Score =  310 bits (793), Expect = 8e-82
 Identities = 151/344 (43%), Positives = 228/344 (66%), Gaps = 3/344 (0%)
 Frame = +1

Query: 1    WDQIFAFRLAKQSFKQSIRKTKTHLLSDLVNSFSAYEVNPTPQSYHLLFKILIQKRPSNR 180
            W + F    A Q+ K+   +    LLS L+NSF++Y+ NPTP++YH + K LI+   +++
Sbjct: 28   WHETFNQTQALQTLKRHQNENPNRLLSLLLNSFNSYDCNPTPEAYHFVLKTLIK---TSQ 84

Query: 181  HDQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFNDAVELFFRLPRFRCDPXXXXXX 360
             D I  +L+ IE  E FETPE  F  +I FYG  +   DA+++F+R+P+FRC P      
Sbjct: 85   FDHIHSVLDRIEFVEKFETPEYFFAQIIGFYGFLDRIEDAIDIFWRIPKFRCVPSSYSLN 144

Query: 361  XXXXXXCRNKMGFEMVPRVLLKSQVMKIRFEESSFGILIKALCKTGSVSNAFELVNQMVD 540
                  CR   G   VP VL+KS+ M IR EE+SF ILI ALCK G V  A E+++ M+ 
Sbjct: 145  SLLYVLCRRNEGLRFVPEVLIKSRDMNIRLEEASFRILITALCKIGKVGYAIEILDCMIS 204

Query: 541  EGFGLDQKICSLMLATMC---RQLNCNVGEIMGFMEDLKKLGFEPRKDDLCNVIRFLVKK 711
            +G+ +D +ICSL+L+ +C   ++L+    +++  ++ ++K+GF PR  D   VIR LV++
Sbjct: 205  DGYDIDARICSLILSFLCGKNKELDLAGFDVLELLQKMEKMGFCPRMGDYSKVIRILVRE 264

Query: 712  GKGIESLELLKQMKMNGVKPDIMCYNLVLDGLIHNRDFSRADKVFDELLVLGLAPDIYTY 891
             +G+E+L++L QMK +G+KPD++CY +VL G++   ++S+AD++FDE+LVLGL PD+YTY
Sbjct: 265  KRGLEALDILGQMKADGMKPDVVCYTMVLHGIVAEGEYSKADEMFDEMLVLGLVPDVYTY 324

Query: 892  NVYISGLFMQKKVDDGIKTLNSMEELGCAPDSSTYSAILRALCE 1023
            N YI+GL  Q  VD  + T+  MEELGC P+  TY+ ILRALC+
Sbjct: 325  NAYINGLCKQNDVDGALDTILRMEELGCKPNLITYNLILRALCK 368


>ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
            mitochondrial-like [Vitis vinifera]
          Length = 505

 Score =  299 bits (765), Expect = 1e-78
 Identities = 146/347 (42%), Positives = 222/347 (63%), Gaps = 8/347 (2%)
 Frame = +1

Query: 1    WDQIFAFRLAKQSFKQSIRK--------TKTHLLSDLVNSFSAYEVNPTPQSYHLLFKIL 156
            W + F  R A Q+ K +I          + +  LS L++SF  Y  +PTP +Y  +   L
Sbjct: 28   WHETFHHRQAMQTLKNTIANQSPSPQSPSNSQFLSILIDSFRIYNSDPTPNAYRFVISTL 87

Query: 157  IQKRPSNRHDQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFNDAVELFFRLPRFRC 336
             + R   +   +  +L+ +EK E FETPE +F +LIK YG+ NMF DAV+LFFR+P FRC
Sbjct: 88   TRCR---QFHHLPPLLHRLEKVEKFETPEFIFTNLIKVYGNANMFEDAVDLFFRIPNFRC 144

Query: 337  DPXXXXXXXXXXXXCRNKMGFEMVPRVLLKSQVMKIRFEESSFGILIKALCKTGSVSNAF 516
             P            C+ + G  MVP++LLKSQ M IR EESSF IL+ ALC+    + A 
Sbjct: 145  VPSVYSLNALLYVLCKRREGLVMVPQILLKSQAMNIRLEESSFRILVAALCRIKKHNYAI 204

Query: 517  ELVNQMVDEGFGLDQKICSLMLATMCRQLNCNVGEIMGFMEDLKKLGFEPRKDDLCNVIR 696
             ++N M+++G+ +D K+CS++L+++C Q   +  E++ FME+++KLGF P + D  NVIR
Sbjct: 205  RILNYMLNDGYAVDAKMCSIILSSLCEQKGLSGDEVLRFMEEMRKLGFYPGRVDCNNVIR 264

Query: 697  FLVKKGKGIESLELLKQMKMNGVKPDIMCYNLVLDGLIHNRDFSRADKVFDELLVLGLAP 876
            FLVK+G  +++L +  QMK +G+KPD + Y ++L+G+  + D+ +AD +FDE+LVLG+ P
Sbjct: 265  FLVKEGMVMDALGVFDQMKTDGIKPDTVSYTMILNGVTADGDYEKADDLFDEMLVLGVVP 324

Query: 877  DIYTYNVYISGLFMQKKVDDGIKTLNSMEELGCAPDSSTYSAILRAL 1017
            DI+ YNVYI+ L  Q  +++G++ L SM ELGC PD  TY+ +L  +
Sbjct: 325  DIHAYNVYINSLCKQNNIEEGVRMLASMRELGCKPDYVTYNMLLEGM 371


>gb|ESW12162.1| hypothetical protein PHAVU_008G089500g [Phaseolus vulgaris]
          Length = 514

 Score =  295 bits (754), Expect = 3e-77
 Identities = 141/316 (44%), Positives = 214/316 (67%)
 Frame = +1

Query: 73   LLSDLVNSFSAYEVNPTPQSYHLLFKILIQKRPSNRHDQIQEILNHIEKGESFETPECVF 252
            LLS L+++F AY  +PTP++Y+ + K L     ++    I  +L+H+E+ E+FETPE + 
Sbjct: 62   LLSTLLDAFKAYSCDPTPKAYYFVIKTLTS---TSHLQDIPPVLDHLEQLETFETPEFIL 118

Query: 253  IDLIKFYGDTNMFNDAVELFFRLPRFRCDPXXXXXXXXXXXXCRNKMGFEMVPRVLLKSQ 432
            + LI+FYG ++   DAV+LF R+PRFRC P            CR +   +MVP +LLKSQ
Sbjct: 119  VYLIRFYGLSDRVQDAVDLFLRIPRFRCTPTVWSLNLVLSLLCRKRECLKMVPEILLKSQ 178

Query: 433  VMKIRFEESSFGILIKALCKTGSVSNAFELVNQMVDEGFGLDQKICSLMLATMCRQLNCN 612
             M IR EES+F +LI+ALC+   V  A +++N M++ G+GLD+ ICSL+++++C Q +  
Sbjct: 179  HMNIRVEESTFQVLIEALCRIKRVGYAIKMLNYMIEGGYGLDETICSLIISSLCEQEDMT 238

Query: 613  VGEIMGFMEDLKKLGFEPRKDDLCNVIRFLVKKGKGIESLELLKQMKMNGVKPDIMCYNL 792
              E +    D++KLGF P   D  N+IRFLVK+GKG ++L++L Q K +G+KPD++CY +
Sbjct: 239  SVEALVIWRDMRKLGFCPGVMDYTNMIRFLVKEGKGTDALDILNQQKKDGIKPDVVCYTM 298

Query: 793  VLDGLIHNRDFSRADKVFDELLVLGLAPDIYTYNVYISGLFMQKKVDDGIKTLNSMEELG 972
            VL G++   ++ + +++FDE+LV GL PD+YTYNVYI+GL  Q  VD+ +K + SMEEL 
Sbjct: 299  VLSGIVAEGEYVKLEELFDEILVFGLVPDVYTYNVYINGLCKQNNVDEALKIVASMEELE 358

Query: 973  CAPDSSTYSAILRALC 1020
            C P+  T + +L ALC
Sbjct: 359  CRPNVVTCNTLLGALC 374


>gb|ESW10362.1| hypothetical protein PHAVU_009G202600g [Phaseolus vulgaris]
          Length = 513

 Score =  294 bits (752), Expect = 4e-77
 Identities = 143/316 (45%), Positives = 213/316 (67%)
 Frame = +1

Query: 73   LLSDLVNSFSAYEVNPTPQSYHLLFKILIQKRPSNRHDQIQEILNHIEKGESFETPECVF 252
            LLS L++SF +Y  +PTP++Y+ L K L     +++   I  +L+H+E  E FETPE   
Sbjct: 62   LLSTLIDSFKSYSCDPTPKAYYFLIKTLTC---TSQFQDIPPVLDHLEHLEKFETPEFNL 118

Query: 253  IDLIKFYGDTNMFNDAVELFFRLPRFRCDPXXXXXXXXXXXXCRNKMGFEMVPRVLLKSQ 432
            + LI+FYG ++   DAV+LF R+PRFRC P            CR +   +MVP +LLKSQ
Sbjct: 119  VYLIRFYGLSDKVQDAVDLFLRIPRFRCTPTVCSLNLVLSLLCRKRECLKMVPEILLKSQ 178

Query: 433  VMKIRFEESSFGILIKALCKTGSVSNAFELVNQMVDEGFGLDQKICSLMLATMCRQLNCN 612
             M IR EES+F +LIKALC+   V  A +++N M++ G+GLD+ +CSL+++++C Q +  
Sbjct: 179  HMNIRVEESTFQVLIKALCRIKRVGYAIKMLNYMIEGGYGLDETMCSLIISSLCEQEDMT 238

Query: 613  VGEIMGFMEDLKKLGFEPRKDDLCNVIRFLVKKGKGIESLELLKQMKMNGVKPDIMCYNL 792
              E +    D++KLGF P   D  N+IRFLVK+GKG+++L++L Q K +G+KPD++CY +
Sbjct: 239  SVEALVIWRDMRKLGFCPGIMDYTNMIRFLVKEGKGMDALDILNQQKKDGIKPDVVCYTM 298

Query: 793  VLDGLIHNRDFSRADKVFDELLVLGLAPDIYTYNVYISGLFMQKKVDDGIKTLNSMEELG 972
            VL G+I   ++ + +++FDE+LV GL PD+YTYNVYI+GL  Q  VD+ +K + SMEEL 
Sbjct: 299  VLSGIIAEGEYVKLEELFDEILVFGLVPDVYTYNVYINGLCKQNNVDEALKIVASMEELE 358

Query: 973  CAPDSSTYSAILRALC 1020
            C P+  T + +L ALC
Sbjct: 359  CKPNVVTCNILLGALC 374


>ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
            mitochondrial-like [Cucumis sativus]
            gi|449483740|ref|XP_004156675.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g38420,
            mitochondrial-like [Cucumis sativus]
          Length = 491

 Score =  293 bits (750), Expect = 7e-77
 Identities = 150/342 (43%), Positives = 218/342 (63%), Gaps = 1/342 (0%)
 Frame = +1

Query: 1    WDQIFAFRLAKQSFKQSIRKTKTHLL-SDLVNSFSAYEVNPTPQSYHLLFKILIQKRPSN 177
            W Q F    A +  KQ+    + HLL S LV SF+AY  +PTP +Y+ + K L +   ++
Sbjct: 30   WHQTFDQDEALRILKQAANPDQPHLLLSALVTSFTAYSCHPTPNAYYFVLKTLAR---TS 86

Query: 178  RHDQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFNDAVELFFRLPRFRCDPXXXXX 357
            +   I  +L+ ++  E+F+TPE +F+DLIK YG  N   DAV LF R+P FRC P     
Sbjct: 87   QFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRMNRIQDAVTLFRRIPMFRCVPSTLSL 146

Query: 358  XXXXXXXCRNKMGFEMVPRVLLKSQVMKIRFEESSFGILIKALCKTGSVSNAFELVNQMV 537
                    RN  G  ++P ++L S  M IR E S+F ILI ALCK   V +A EL N M+
Sbjct: 147  NSLLSQLSRNAQGLPIIPDIILNSHSMGIRLEHSTFQILITALCKVNKVGHAMELFNYMI 206

Query: 538  DEGFGLDQKICSLMLATMCRQLNCNVGEIMGFMEDLKKLGFEPRKDDLCNVIRFLVKKGK 717
             EG+GL+ +ICSL+LA++C+Q   +   ++GF+E++++ GF P   D  NVI+F V +G 
Sbjct: 207  TEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEEMRQKGFCPAVVDYSNVIKFFVTRGM 266

Query: 718  GIESLELLKQMKMNGVKPDIMCYNLVLDGLIHNRDFSRADKVFDELLVLGLAPDIYTYNV 897
            G ++++LL +MK +G KPDI+CY +VL+G+I + D+  AD++FDELL+ GL PDIYTYNV
Sbjct: 267  GSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADELFDELLLFGLVPDIYTYNV 326

Query: 898  YISGLFMQKKVDDGIKTLNSMEELGCAPDSSTYSAILRALCE 1023
            YI GL  Q     G++ +  ME LGC P+  TY+ IL++LC+
Sbjct: 327  YIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNVILKSLCK 368



 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 48/184 (26%), Positives = 89/184 (48%)
 Frame = +1

Query: 472  LIKALCKTGSVSNAFELVNQMVDEGFGLDQKICSLMLATMCRQLNCNVGEIMGFMEDLKK 651
            +IK     G  S+A +L+N+M  +GF  D    +++L  +    +  + + +   ++L  
Sbjct: 257  VIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADEL--FDELLL 314

Query: 652  LGFEPRKDDLCNVIRFLVKKGKGIESLELLKQMKMNGVKPDIMCYNLVLDGLIHNRDFSR 831
             G  P        I  L K+G  +  L+++  M+  G +P+++ YN++L  L    +   
Sbjct: 315  FGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNVILKSLCKTGELDE 374

Query: 832  ADKVFDELLVLGLAPDIYTYNVYISGLFMQKKVDDGIKTLNSMEELGCAPDSSTYSAILR 1011
            A K+  ++ + GLA ++ T+ + I GLF   +V +    L  M      P  ST+S IL 
Sbjct: 375  ARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSRFPPQISTFSEILS 434

Query: 1012 ALCE 1023
             LC+
Sbjct: 435  WLCK 438


>ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
            mitochondrial-like [Glycine max]
          Length = 499

 Score =  293 bits (749), Expect = 1e-76
 Identities = 143/315 (45%), Positives = 212/315 (67%)
 Frame = +1

Query: 73   LLSDLVNSFSAYEVNPTPQSYHLLFKILIQKRPSNRHDQIQEILNHIEKGESFETPECVF 252
            LLS L++SF AY ++PTP++Y  + K L     +++   I  +L H+E  E FETPE + 
Sbjct: 65   LLSTLLDSFKAYSIDPTPKAYFFVLKTLTS---TSQLQDIPPVLYHLEHLEKFETPESIL 121

Query: 253  IDLIKFYGDTNMFNDAVELFFRLPRFRCDPXXXXXXXXXXXXCRNKMGFEMVPRVLLKSQ 432
            + LI+FYG ++   DAV+LFFR+PRFRC P            CR +   EMVP +LLKSQ
Sbjct: 122  VYLIRFYGLSDRVQDAVDLFFRIPRFRCTPTVCSLNLVLSLLCRKRDCLEMVPEILLKSQ 181

Query: 433  VMKIRFEESSFGILIKALCKTGSVSNAFELVNQMVDEGFGLDQKICSLMLATMCRQLNCN 612
             M IR EES+F +LI+ALC+   V  A +++N MV++G+GLD+KICSL+++ +C Q +  
Sbjct: 182  HMNIRVEESTFRVLIRALCRIKRVGYAIKMLNFMVEDGYGLDEKICSLVISALCEQKDLT 241

Query: 613  VGEIMGFMEDLKKLGFEPRKDDLCNVIRFLVKKGKGIESLELLKQMKMNGVKPDIMCYNL 792
              E +    D++KLGF P   D  N+IRFLVK+G+G+++L++L Q K +G+K D++ Y +
Sbjct: 242  SAEALVVWRDMRKLGFCPGVMDYTNMIRFLVKEGRGMDALDILNQQKQDGIKLDVVSYTM 301

Query: 793  VLDGLIHNRDFSRADKVFDELLVLGLAPDIYTYNVYISGLFMQKKVDDGIKTLNSMEELG 972
            VL G++   ++   D++FDE+LV+GL PD YTYNVYI+GL  Q  V + ++ + SMEELG
Sbjct: 302  VLSGIVAEGEYVMLDELFDEMLVIGLIPDAYTYNVYINGLCKQNNVAEALQIVASMEELG 361

Query: 973  CAPDSSTYSAILRAL 1017
            C P+  TY+ +L AL
Sbjct: 362  CKPNVVTYNTLLGAL 376



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 46/187 (24%), Positives = 92/187 (49%), Gaps = 3/187 (1%)
 Frame = +1

Query: 472  LIKALCKTGSVSNAFELVNQMVDEGFGLDQKICSLMLATMCRQLNCNVGEIM---GFMED 642
            +I+ L K G   +A +++NQ   +G  LD    +++L+ +  +     GE +      ++
Sbjct: 267  MIRFLVKEGRGMDALDILNQQKQDGIKLDVVSYTMVLSGIVAE-----GEYVMLDELFDE 321

Query: 643  LKKLGFEPRKDDLCNVIRFLVKKGKGIESLELLKQMKMNGVKPDIMCYNLVLDGLIHNRD 822
            +  +G  P        I  L K+    E+L+++  M+  G KP+++ YN +L  L    D
Sbjct: 322  MLVIGLIPDAYTYNVYINGLCKQNNVAEALQIVASMEELGCKPNVVTYNTLLGALSVAGD 381

Query: 823  FSRADKVFDELLVLGLAPDIYTYNVYISGLFMQKKVDDGIKTLNSMEELGCAPDSSTYSA 1002
            F +A ++  E+   G+  +++TY + + GL  + ++ +    L  M E    P SST+  
Sbjct: 382  FVKARELMKEMGWKGVGLNLHTYRIVLDGLVGKGEIGESCLLLEEMLEKCLFPRSSTFDN 441

Query: 1003 ILRALCE 1023
            I+  +C+
Sbjct: 442  IIFQMCQ 448


>gb|AHB18409.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 480

 Score =  276 bits (706), Expect = 9e-72
 Identities = 135/342 (39%), Positives = 215/342 (62%), Gaps = 3/342 (0%)
 Frame = +1

Query: 1    WDQIFAFRLAKQSFKQSIRK---TKTHLLSDLVNSFSAYEVNPTPQSYHLLFKILIQKRP 171
            W Q F       SFKQ + +    +   +  L+ S S Y ++ +PQ+YH L K L+  R 
Sbjct: 26   WRQAFTQNQPMVSFKQLVARHNPLQPDFVPSLLQSLSLYNLHQSPQAYHFLIKTLLHNR- 84

Query: 172  SNRHDQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFNDAVELFFRLPRFRCDPXXX 351
              +   I  +L+H++  + F+TPE +F  L+KFYG  N   DAV++F+R+P+FRC P   
Sbjct: 85   --QFHHIPSLLHHLQL-QHFQTPEYIFTHLVKFYGKANRIQDAVDIFYRIPQFRCFPSAY 141

Query: 352  XXXXXXXXXCRNKMGFEMVPRVLLKSQVMKIRFEESSFGILIKALCKTGSVSNAFELVNQ 531
                     CR++ G +++P+VLL S  M IR EES+F +L+  LC+   V+ A E++ +
Sbjct: 142  SLNALLALLCRSQRGLKLLPQVLLNSLHMNIRLEESTFRLLVCTLCRMNKVAYAIEILQR 201

Query: 532  MVDEGFGLDQKICSLMLATMCRQLNCNVGEIMGFMEDLKKLGFEPRKDDLCNVIRFLVKK 711
            M+D+G G++ K+ S +L+++C + + +  +++GF   L+KLGF P   D   V+RFLVKK
Sbjct: 202  MLDDGLGVNDKVFSFVLSSVCAEGDLDGEDVIGFWRGLRKLGFSPAMGDYDGVVRFLVKK 261

Query: 712  GKGIESLELLKQMKMNGVKPDIMCYNLVLDGLIHNRDFSRADKVFDELLVLGLAPDIYTY 891
            G+G+++ ++L QMK +G+ P I+ Y +VL+G+    D+  AD++FDELL+LGL P++YTY
Sbjct: 262  GRGLDAWDVLNQMKSDGIMPGIISYTMVLNGVTAEGDYILADELFDELLMLGLVPNVYTY 321

Query: 892  NVYISGLFMQKKVDDGIKTLNSMEELGCAPDSSTYSAILRAL 1017
              YI  L  Q KV++GIK +  MEELGC P+   Y+ +LR +
Sbjct: 322  KAYIDALCKQNKVEEGIKMVACMEELGCKPNVLIYNTLLRTI 363


>ref|XP_006411054.1| hypothetical protein EUTSA_v10017948mg [Eutrema salsugineum]
            gi|557112223|gb|ESQ52507.1| hypothetical protein
            EUTSA_v10017948mg [Eutrema salsugineum]
          Length = 456

 Score =  270 bits (689), Expect = 9e-70
 Identities = 130/315 (41%), Positives = 207/315 (65%)
 Frame = +1

Query: 73   LLSDLVNSFSAYEVNPTPQSYHLLFKILIQKRPSNRHDQIQEILNHIEKGESFETPECVF 252
            +L  L++SF  +   PTPQ+Y  + K L +   +++ + I  +LNHIE  E F+TPE +F
Sbjct: 58   VLRTLISSFRLHNCEPTPQAYKFVIKTLAK---TSQLENIASVLNHIEISEKFDTPESIF 114

Query: 253  IDLIKFYGDTNMFNDAVELFFRLPRFRCDPXXXXXXXXXXXXCRNKMGFEMVPRVLLKSQ 432
             D+I  YG +    +A+++FF++P FRC P             R + G +MVP VLLK+ 
Sbjct: 115  RDVIFAYGFSGRIEEAIDVFFKIPNFRCVPSAYTLNALLSVLVRKRQGLKMVPEVLLKAS 174

Query: 433  VMKIRFEESSFGILIKALCKTGSVSNAFELVNQMVDEGFGLDQKICSLMLATMCRQLNCN 612
             + +R EES+ GILI ALC+ G V  A +LV  M D+ + +D ++ SL+L+++C+  + +
Sbjct: 175  KLGVRLEESTLGILIDALCRIGEVDCATDLVKDMSDDCYIVDPRLYSLLLSSVCKHKDSS 234

Query: 613  VGEIMGFMEDLKKLGFEPRKDDLCNVIRFLVKKGKGIESLELLKQMKMNGVKPDIMCYNL 792
              +++G++E L+K  F P   D   V+RFLV+ G+G E + +L QMK + ++PDI+CY +
Sbjct: 235  CFDVIGYLEGLRKTRFSPDLRDYTAVMRFLVEGGRGKEVVSVLNQMKCDRIEPDIVCYTI 294

Query: 793  VLDGLIHNRDFSRADKVFDELLVLGLAPDIYTYNVYISGLFMQKKVDDGIKTLNSMEELG 972
            +L G+I + D+ +ADK+FDELL+LGL PD+YTYNVYI+GL  Q  ++ GIK ++ ME+LG
Sbjct: 295  ILQGVIADEDYKKADKLFDELLLLGLVPDVYTYNVYINGLCKQSDIECGIKMMSCMEKLG 354

Query: 973  CAPDSSTYSAILRAL 1017
              P+  TY+ +++AL
Sbjct: 355  SEPNVVTYNILIKAL 369


>ref|NP_181376.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|218546769|sp|Q8L6Y7.2|PP193_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g38420, mitochondrial; Flags: Precursor
            gi|3395430|gb|AAC28762.1| hypothetical protein
            [Arabidopsis thaliana] gi|330254441|gb|AEC09535.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 453

 Score =  266 bits (679), Expect = 1e-68
 Identities = 132/334 (39%), Positives = 213/334 (63%), Gaps = 9/334 (2%)
 Frame = +1

Query: 43   KQSIRKTKTHLLSD---------LVNSFSAYEVNPTPQSYHLLFKILIQKRPSNRHDQIQ 195
            K ++ + +++LL+D         L++SF  +   PTPQ+Y  + K L +   S++ + I 
Sbjct: 36   KYAMEELRSNLLTDSENASVMRTLLSSFQLHNCEPTPQAYRFVIKTLAK---SSQLENIS 92

Query: 196  EILNHIEKGESFETPECVFIDLIKFYGDTNMFNDAVELFFRLPRFRCDPXXXXXXXXXXX 375
             +L H+E  E F+TPE +F D+I  YG +    +A+E+FF++P FRC P           
Sbjct: 93   SVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLV 152

Query: 376  XCRNKMGFEMVPRVLLKSQVMKIRFEESSFGILIKALCKTGSVSNAFELVNQMVDEGFGL 555
              R +   E+VP +L+K+  M +R EES+FGILI ALC+ G V  A ELV  M  +   +
Sbjct: 153  LVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIV 212

Query: 556  DQKICSLMLATMCRQLNCNVGEIMGFMEDLKKLGFEPRKDDLCNVIRFLVKKGKGIESLE 735
            D ++ S +L+++C+  + +  +++G++EDL+K  F P   D   V+RFLV+ G+G E + 
Sbjct: 213  DPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVS 272

Query: 736  LLKQMKMNGVKPDIMCYNLVLDGLIHNRDFSRADKVFDELLVLGLAPDIYTYNVYISGLF 915
            +L QMK + V+PD++CY +VL G+I + D+ +ADK+FDELL+LGLAPD+YTYNVYI+GL 
Sbjct: 273  VLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLC 332

Query: 916  MQKKVDDGIKTLNSMEELGCAPDSSTYSAILRAL 1017
             Q  ++  +K ++SM +LG  P+  TY+ +++AL
Sbjct: 333  KQNDIEGALKMMSSMNKLGSEPNVVTYNILIKAL 366


>gb|AAM98219.1| unknown protein [Arabidopsis thaliana] gi|31376375|gb|AAP49514.1|
            At2g38420 [Arabidopsis thaliana]
          Length = 444

 Score =  266 bits (679), Expect = 1e-68
 Identities = 132/334 (39%), Positives = 213/334 (63%), Gaps = 9/334 (2%)
 Frame = +1

Query: 43   KQSIRKTKTHLLSD---------LVNSFSAYEVNPTPQSYHLLFKILIQKRPSNRHDQIQ 195
            K ++ + +++LL+D         L++SF  +   PTPQ+Y  + K L +   S++ + I 
Sbjct: 27   KYAMEELRSNLLTDSENASVMRTLLSSFQLHNCEPTPQAYRFVIKTLAK---SSQLENIS 83

Query: 196  EILNHIEKGESFETPECVFIDLIKFYGDTNMFNDAVELFFRLPRFRCDPXXXXXXXXXXX 375
             +L H+E  E F+TPE +F D+I  YG +    +A+E+FF++P FRC P           
Sbjct: 84   SVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLV 143

Query: 376  XCRNKMGFEMVPRVLLKSQVMKIRFEESSFGILIKALCKTGSVSNAFELVNQMVDEGFGL 555
              R +   E+VP +L+K+  M +R EES+FGILI ALC+ G V  A ELV  M  +   +
Sbjct: 144  LVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIV 203

Query: 556  DQKICSLMLATMCRQLNCNVGEIMGFMEDLKKLGFEPRKDDLCNVIRFLVKKGKGIESLE 735
            D ++ S +L+++C+  + +  +++G++EDL+K  F P   D   V+RFLV+ G+G E + 
Sbjct: 204  DPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVS 263

Query: 736  LLKQMKMNGVKPDIMCYNLVLDGLIHNRDFSRADKVFDELLVLGLAPDIYTYNVYISGLF 915
            +L QMK + V+PD++CY +VL G+I + D+ +ADK+FDELL+LGLAPD+YTYNVYI+GL 
Sbjct: 264  VLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLC 323

Query: 916  MQKKVDDGIKTLNSMEELGCAPDSSTYSAILRAL 1017
             Q  ++  +K ++SM +LG  P+  TY+ +++AL
Sbjct: 324  KQNDIEGALKMMSSMNKLGSEPNVVTYNILIKAL 357


>ref|XP_002879744.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297325583|gb|EFH56003.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 444

 Score =  262 bits (670), Expect = 1e-67
 Identities = 129/334 (38%), Positives = 213/334 (63%), Gaps = 9/334 (2%)
 Frame = +1

Query: 43   KQSIRKTKTHLLSD---------LVNSFSAYEVNPTPQSYHLLFKILIQKRPSNRHDQIQ 195
            K ++ + +++LL+D         LV+SF  +   PTPQ+Y  + + L +   +++ + I 
Sbjct: 27   KYAMEELRSNLLADSENGSVMRTLVSSFQLHNCEPTPQAYRFVIETLAK---TSQLENIA 83

Query: 196  EILNHIEKGESFETPECVFIDLIKFYGDTNMFNDAVELFFRLPRFRCDPXXXXXXXXXXX 375
             +L+H+E  E F+TPE +F D+I  YG +    +A+++FF++P FRC P           
Sbjct: 84   SVLDHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIDVFFKIPNFRCVPSAYTLNALLLV 143

Query: 376  XCRNKMGFEMVPRVLLKSQVMKIRFEESSFGILIKALCKTGSVSNAFELVNQMVDEGFGL 555
              R +   E+VP +L+K+  M +R EES+FGILI ALC+ G V  A ELV  M ++   +
Sbjct: 144  LVRKRQSLELVPEILVKASRMGVRLEESTFGILINALCRIGEVDCATELVRYMSEDSVIV 203

Query: 556  DQKICSLMLATMCRQLNCNVGEIMGFMEDLKKLGFEPRKDDLCNVIRFLVKKGKGIESLE 735
            D ++ SL+L+++C+  + +  +++G++EDL+K  F P   D   V+RFLV+ G+G E + 
Sbjct: 204  DPRLYSLLLSSVCKHKDSSCFDVIGYLEDLRKTRFLPGLRDYTVVMRFLVEGGRGKEVVS 263

Query: 736  LLKQMKMNGVKPDIMCYNLVLDGLIHNRDFSRADKVFDELLVLGLAPDIYTYNVYISGLF 915
            +L QMK + + PD++CY +VL G+I + D+ +ADK+FDELL+LGL PD+YTYNVYI+GL 
Sbjct: 264  VLNQMKCDRIDPDVVCYTIVLLGVIADEDYPKADKLFDELLLLGLDPDVYTYNVYINGLC 323

Query: 916  MQKKVDDGIKTLNSMEELGCAPDSSTYSAILRAL 1017
             Q  ++  IK ++SM +LG  P+  TY+ +++ L
Sbjct: 324  KQNDIEGAIKMMSSMNKLGSEPNVVTYNIVIKGL 357


>ref|XP_006294146.1| hypothetical protein CARUB_v10023139mg [Capsella rubella]
            gi|482562854|gb|EOA27044.1| hypothetical protein
            CARUB_v10023139mg [Capsella rubella]
          Length = 470

 Score =  258 bits (660), Expect = 2e-66
 Identities = 126/315 (40%), Positives = 203/315 (64%)
 Frame = +1

Query: 73   LLSDLVNSFSAYEVNPTPQSYHLLFKILIQKRPSNRHDQIQEILNHIEKGESFETPECVF 252
            ++  LV+SF  +   PTPQ+Y  + K L +   +++ + I  +L+H+E  E F+TPE +F
Sbjct: 72   VIRTLVSSFRLHNCEPTPQAYRFVIKTLAK---TSQLENIASVLSHLEVSEKFDTPESIF 128

Query: 253  IDLIKFYGDTNMFNDAVELFFRLPRFRCDPXXXXXXXXXXXXCRNKMGFEMVPRVLLKSQ 432
             D+I  YG      +A+++FF++P FRC P             R +   E+VP +L+K+ 
Sbjct: 129  RDVIAAYGFAGRIGEAIDVFFKIPNFRCVPSAYTLNALLLVLVRKRESLELVPEILVKAS 188

Query: 433  VMKIRFEESSFGILIKALCKTGSVSNAFELVNQMVDEGFGLDQKICSLMLATMCRQLNCN 612
             M +R EES+FGILI ALCK G V  A ELV  M  +   +D ++ S +L+++C+  + +
Sbjct: 189  RMGVRLEESTFGILIDALCKIGEVDCATELVRYMSIDCVIVDPRLYSQLLSSVCKHKDSS 248

Query: 613  VGEIMGFMEDLKKLGFEPRKDDLCNVIRFLVKKGKGIESLELLKQMKMNGVKPDIMCYNL 792
              +++G++EDL+K  F P   D   V+ FLV+ G+G E + +L QMK + ++PDI+CY +
Sbjct: 249  CFDVVGYLEDLRKTRFSPGLRDYTVVMSFLVEGGRGKEVVSVLNQMKCDRIEPDIVCYTI 308

Query: 793  VLDGLIHNRDFSRADKVFDELLVLGLAPDIYTYNVYISGLFMQKKVDDGIKTLNSMEELG 972
            VL G+I + ++S+ADK FDELL+LGLAPD+YTYNVY++GL  Q  ++  +K ++SM +LG
Sbjct: 309  VLQGVIADAEYSKADKFFDELLLLGLAPDVYTYNVYMNGLCKQNDIEGALKMMSSMNKLG 368

Query: 973  CAPDSSTYSAILRAL 1017
              P+  TY+ +++AL
Sbjct: 369  SEPNVITYNILIKAL 383


>ref|XP_002533822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223526239|gb|EEF28557.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 373

 Score =  251 bits (640), Expect = 4e-64
 Identities = 122/243 (50%), Positives = 164/243 (67%)
 Frame = +1

Query: 295  DAVELFFRLPRFRCDPXXXXXXXXXXXXCRNKMGFEMVPRVLLKSQVMKIRFEESSFGIL 474
            +A+ LF+R P FRC P            CR   G   VP VLLKSQ M IR EESSF +L
Sbjct: 3    NAIHLFYRTPNFRCVPSVYLLNTLLSVLCRTNEGLNFVPEVLLKSQDMNIRMEESSFRLL 62

Query: 475  IKALCKTGSVSNAFELVNQMVDEGFGLDQKICSLMLATMCRQLNCNVGEIMGFMEDLKKL 654
            I ALC    V  A E+ N M+++GF +D KICSL+L+++C Q + +  E+M F+ +L+K 
Sbjct: 63   INALCSINKVGYAVEMFNCMINDGFSVDSKICSLLLSSLCYQADISSSEVMRFLGELRKF 122

Query: 655  GFEPRKDDLCNVIRFLVKKGKGIESLELLKQMKMNGVKPDIMCYNLVLDGLIHNRDFSRA 834
            GF P   D   VI FLV++G G+E+L +L QMK++G+KPDI+CY  VL+G+I N  +S+A
Sbjct: 123  GFCPGIKDYSKVINFLVRRGMGMEALNVLNQMKLDGIKPDIVCYTTVLNGVIANGVYSKA 182

Query: 835  DKVFDELLVLGLAPDIYTYNVYISGLFMQKKVDDGIKTLNSMEELGCAPDSSTYSAILRA 1014
            D++FDELLV GL PD+YTYNVYI GL  Q  V+ GI+ + SMEELGC P+  TY+ +L  
Sbjct: 183  DELFDELLVFGLVPDVYTYNVYIYGLCKQNNVEAGIEMVTSMEELGCKPNLITYNILLED 242

Query: 1015 LCE 1023
            LC+
Sbjct: 243  LCK 245


>emb|CAN63706.1| hypothetical protein VITISV_013107 [Vitis vinifera]
          Length = 390

 Score =  225 bits (573), Expect = 2e-56
 Identities = 122/347 (35%), Positives = 192/347 (55%), Gaps = 8/347 (2%)
 Frame = +1

Query: 1    WDQIFAFRLAKQSFKQSIRK--------TKTHLLSDLVNSFSAYEVNPTPQSYHLLFKIL 156
            W + F  R A Q+ K +I          + +  LS L++SF  Y  +PTP +Y  +   L
Sbjct: 30   WHETFHHRQAMQTLKNTIANQSPSPQSPSNSQFLSILIDSFRIYNSDPTPNAYRFVISTL 89

Query: 157  IQKRPSNRHDQIQEILNHIEKGESFETPECVFIDLIKFYGDTNMFNDAVELFFRLPRFRC 336
             + R   +   +  +L+ +EK E FETPE +F +LIK                       
Sbjct: 90   TRCR---QFHHLPPLLHRLEKVEKFETPEFIFTNLIK----------------------- 123

Query: 337  DPXXXXXXXXXXXXCRNKMGFEMVPRVLLKSQVMKIRFEESSFGILIKALCKTGSVSNAF 516
                                      +LLKSQ M IR EESSF IL+ ALC+    + A 
Sbjct: 124  --------------------------ILLKSQAMNIRLEESSFRILVAALCRIKKHNYAI 157

Query: 517  ELVNQMVDEGFGLDQKICSLMLATMCRQLNCNVGEIMGFMEDLKKLGFEPRKDDLCNVIR 696
             ++N M+++G+ +D K+CS++L+++C Q   +  E++ FME+++KLGF P + D  NVI 
Sbjct: 158  RILNYMLNDGYAVDAKMCSIILSSLCEQKGLSGDEVLRFMEEMRKLGFYPGRVDCNNVIX 217

Query: 697  FLVKKGKGIESLELLKQMKMNGVKPDIMCYNLVLDGLIHNRDFSRADKVFDELLVLGLAP 876
            FLVK+G  +++L +  QMK +G+KPD + Y ++L+G+  + D+ +AD +FDE+LVLG+ P
Sbjct: 218  FLVKEGMVMDALGVFDQMKTDGIKPDTVSYTMILNGVTADGDYEKADDLFDEMLVLGVVP 277

Query: 877  DIYTYNVYISGLFMQKKVDDGIKTLNSMEELGCAPDSSTYSAILRAL 1017
            DI+ YNVYI+ L  Q  +++G++ L SM ELGC PD   Y+ +L  +
Sbjct: 278  DIHAYNVYINSLCKQNNIEEGVRMLASMRELGCKPDYVXYNMLLEGM 324