BLASTX nr result

ID: Rehmannia22_contig00023698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00023698
         (548 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    60   4e-07
ref|XP_006283806.1| hypothetical protein CARUB_v10004905mg [Caps...    59   6e-07
gb|EOY12492.1| F-box/RNI superfamily protein, putative [Theobrom...    59   1e-06
emb|CBI32913.3| unnamed protein product [Vitis vinifera]               57   4e-06
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    57   4e-06
ref|XP_006411527.1| hypothetical protein EUTSA_v10017553mg, part...    56   5e-06
gb|EOY12923.1| F-box/RNI/FBD-like domains-containing protein, pu...    55   8e-06
gb|EOY12922.1| F-box/RNI/FBD-like domains-containing protein, pu...    55   8e-06

>ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75249810|sp|Q94B46.1|FBL74_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g14096
           gi|14596145|gb|AAK68800.1| Unknown protein [Arabidopsis
           thaliana] gi|22136112|gb|AAM91134.1| unknown protein
           [Arabidopsis thaliana] gi|332657971|gb|AEE83371.1|
           F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 468

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 49/141 (34%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
 Frame = -2

Query: 547 KKLYFYSLECE---VDLSYLISGCPVLEELFIDGTPY--FGCCDISSPTLKRLTIDFRFD 383
           K LY  S   E   + L+ L+SGCP+LE+L +D  P+  +    +S PTLKRLT    F 
Sbjct: 161 KTLYIDSCYFEKYGIGLTKLLSGCPILEDLVLDDIPWCTWDFASVSVPTLKRLT----FS 216

Query: 382 SSEFDILDYRV*INAPALTYLNVCDCSYQHISISPLKSLIEAYIWLNTLPSNDFY----- 218
           +   D     V I+ P L YL   D            SL+EA+I L  L  +  Y     
Sbjct: 217 TQVRDEFPKSVSIDTPNLVYLKFTDTVAGKYPKVNFDSLVEAHIDLRLLQGHQGYGENDM 276

Query: 217 CRSVLKFLDSLCKVKCLKLSS 155
             +   F+  +C VK L LSS
Sbjct: 277 VGNATDFIMRICNVKTLYLSS 297


>ref|XP_006283806.1| hypothetical protein CARUB_v10004905mg [Capsella rubella]
           gi|482552511|gb|EOA16704.1| hypothetical protein
           CARUB_v10004905mg [Capsella rubella]
          Length = 421

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
 Frame = -2

Query: 541 LYFYSLECEVDLSYLISGCPVLEELFIDGTPYFG---CCDISSPTLKRLTI--DFRFDSS 377
           +YFY+ +C V L  L+S CP LEEL I G  +     C ++SS TLK+LTI   FRF   
Sbjct: 158 IYFYNSDCCV-LGKLLSACPALEELTIRGESWQCIEFCRNVSSSTLKKLTITPSFRFHYD 216

Query: 376 EFDILDYRV*INAPALTYLNVCDCSYQHISISPLKSLIEAYIWLN 242
            +D+       + P+LTYL   D   +H     L++L+EA + L+
Sbjct: 217 FWDMA-----FDTPSLTYLEYSDLVQKHYPFVNLEALVEAKLDLD 256


>gb|EOY12492.1| F-box/RNI superfamily protein, putative [Theobroma cacao]
          Length = 436

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
 Frame = -2

Query: 547 KKLYFYSLECEVDLSY--LISGCPVLEELFIDGTPYFGCC--DISSPTLKRLTIDFRFDS 380
           K LY   +E   D S   L S CP LEEL +           ++S+PTLKRLTI +    
Sbjct: 168 KILYLELIEFTDDDSVQRLFSSCPRLEELVVQNCKLKNISKFEVSNPTLKRLTISYP--- 224

Query: 379 SEFDILDYR--V*INAPALTYLNVCDCSYQHISISPLKSLIEAYIWLNTLPSNDFYCRSV 206
              ++ +Y+  V INAP+L Y        ++ S   L+SL+EAYI    + +++FY    
Sbjct: 225 ---EVYEYKHEVVINAPSLVYFKCYHFIARYFSYIDLQSLVEAYINCGPVLNSEFYDSGT 281

Query: 205 LKFLDSLCKVKCLKLS 158
              +  + +V+ L LS
Sbjct: 282 ADLIRGISRVQSLHLS 297


>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 18/148 (12%)
 Frame = -2

Query: 547 KKLYFYSLECEVD--LSYLISGCPVLEELFIDGTPYFG--CCDISSPTLKRLTIDFRFDS 380
           K L+  S+E   D  +  L+SGCPVLEEL I+          ++S+P+LK L I F  D 
Sbjct: 143 KALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDG 202

Query: 379 S----EFDILDYRV*INAPALTYLNVCDCSYQHISISPLKSLIEAYIWLNTLPSNDF--- 221
                E +  DY+V ++AP L YL++ D   +   +  L SL++A+I +    S +F   
Sbjct: 203 FAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFIDVEQ-DSEEFEES 261

Query: 220 -------YCRSVLKFLDSLCKVKCLKLS 158
                  Y   + + L  +  VKCL L+
Sbjct: 262 PHNGGISYHGPIYELLGRISNVKCLSLT 289


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 18/148 (12%)
 Frame = -2

Query: 547 KKLYFYSLECEVD--LSYLISGCPVLEELFIDGTPYFG--CCDISSPTLKRLTIDFRFDS 380
           K L+  S+E   D  +  L+SGCPVLEEL I+          ++S+P+LK L I F  D 
Sbjct: 166 KALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDG 225

Query: 379 S----EFDILDYRV*INAPALTYLNVCDCSYQHISISPLKSLIEAYIWLNTLPSNDF--- 221
                E +  DY+V ++AP L YL++ D   +   +  L SL++A+I +    S +F   
Sbjct: 226 FAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFIDVEQ-DSEEFEES 284

Query: 220 -------YCRSVLKFLDSLCKVKCLKLS 158
                  Y   + + L  +  VKCL L+
Sbjct: 285 PHNGGISYHGPIYELLGRISNVKCLSLT 312


>ref|XP_006411527.1| hypothetical protein EUTSA_v10017553mg, partial [Eutrema
           salsugineum] gi|557112696|gb|ESQ52980.1| hypothetical
           protein EUTSA_v10017553mg, partial [Eutrema salsugineum]
          Length = 338

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
 Frame = -2

Query: 541 LYFYSLECEVDLSYLISGCPVLEELFIDGTPYFG---CCDISSPTLKRLTIDFRFDSSEF 371
           +YFY+    V L  L+SGCP+LEEL I    +     CC +SS TLK+LTI+ R     F
Sbjct: 161 VYFYNSGYCV-LEKLVSGCPLLEELTIRSARWQSGNFCCIVSSWTLKKLTIEVR---DAF 216

Query: 370 DILDYRV*INAPALTYLNVCDCSYQHISISPLKSLIEAYIWLN 242
           D  ++ +  + P+L YL   D   + + +  L+SL+EA + L+
Sbjct: 217 D--NWEISFDTPSLVYLEYSDVVPRAVPVVNLESLVEAKLGLH 257


>gb|EOY12923.1| F-box/RNI/FBD-like domains-containing protein, putative isoform 2,
           partial [Theobroma cacao]
          Length = 366

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
 Frame = -2

Query: 541 LYFYSLECEVDLSYLISGCPVLEELFIDGTPYFGCCDIS--SPTLKRLTIDFRFDSSEFD 368
           L + ++  +  L  L SGC VLE L +    +    DI   S TLK L+I+ R+      
Sbjct: 183 LLYVNIANDESLGKLFSGCFVLETLLLKTDYHENTLDIKLCSSTLKSLSINLRY------ 236

Query: 367 ILDYRV*INAPALTYLNVCDCSYQHISISPLKSLIEAYIWLNTLPSNDFYCRSVLKFLDS 188
             +Y++ INAP L YL + +  +Q   I  L SL+EA I +N       Y  S+ + +  
Sbjct: 237 -AEYKLEINAPVLEYLELEESYHQVSFIGNLSSLVEANIHIN-------YGISLNQLIRV 288

Query: 187 LCKVKCLKLSSY 152
           L  VK L L+SY
Sbjct: 289 LYNVKLLSLASY 300


>gb|EOY12922.1| F-box/RNI/FBD-like domains-containing protein, putative isoform 1
           [Theobroma cacao]
          Length = 413

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
 Frame = -2

Query: 541 LYFYSLECEVDLSYLISGCPVLEELFIDGTPYFGCCDIS--SPTLKRLTIDFRFDSSEFD 368
           L + ++  +  L  L SGC VLE L +    +    DI   S TLK L+I+ R+      
Sbjct: 183 LLYVNIANDESLGKLFSGCFVLETLLLKTDYHENTLDIKLCSSTLKSLSINLRY------ 236

Query: 367 ILDYRV*INAPALTYLNVCDCSYQHISISPLKSLIEAYIWLNTLPSNDFYCRSVLKFLDS 188
             +Y++ INAP L YL + +  +Q   I  L SL+EA I +N       Y  S+ + +  
Sbjct: 237 -AEYKLEINAPVLEYLELEESYHQVSFIGNLSSLVEANIHIN-------YGISLNQLIRV 288

Query: 187 LCKVKCLKLSSY 152
           L  VK L L+SY
Sbjct: 289 LYNVKLLSLASY 300


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