BLASTX nr result

ID: Rehmannia22_contig00022904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00022904
         (572 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006490371.1| PREDICTED: DNA mismatch repair protein MSH3-...    63   6e-08

>ref|XP_006490371.1| PREDICTED: DNA mismatch repair protein MSH3-like [Citrus sinensis]
          Length = 1087

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
 Frame = -1

Query: 572  IRRAVAMAARLEVEVCKRDKNKLSMNCSMP--IDKSEDAEEVAYLPPNRLQTAPIETLEE 399
            I RA  +AA+LE EV  R +N+ +    +    D+ ++A+E   + P       +E  E+
Sbjct: 987  ISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPESFYLGRVEASED 1046

Query: 398  VEKAYRDLFFYLNTALHNEDVAKRFNSLKHAKSLANKLL 282
            +  +YRDLF  L  A H+++ AK F  LKHA+S+A +L+
Sbjct: 1047 LISSYRDLFLNLKFATHDDNPAKSFQFLKHARSIAKELI 1085


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