BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00022832
         (2243 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       594   e-167
emb|CBI17549.3| unnamed protein product [Vitis vinifera]              537   e-150
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   526   e-146
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s...   523   e-145
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s...   519   e-144
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s...   516   e-143
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu...   505   e-140
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo...   503   e-139
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s...   499   e-138
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   499   e-138
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   498   e-138
gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]          494   e-137
gb|EOX91149.1| Transcription regulators,zinc ion binding, putati...   489   e-135
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati...   487   e-135
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr...   484   e-134
ref|XP_004232385.1| PREDICTED: uncharacterized protein LOC101252...   461   e-127
ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5...   456   e-125
ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III s...   452   e-124
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor...   447   e-122
gb|ABU45208.1| unknown [Solanum bulbocastanum]                        444   e-122

>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  594 bits (1531), Expect = e-167
 Identities = 316/574 (55%), Positives = 389/574 (67%), Gaps = 6/574 (1%)
 Frame = -1

Query: 2084 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 1905
            Y +P +DP T+LYVLQYPLR  WRPYELD RCEEVRVK  S EVE+DL V VDSKNYDS 
Sbjct: 114  YLTPSIDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSD 173

Query: 1904 ADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSK 1725
            ADPRV M KQ LT+SW+P   +GYAVGVL GNKLHLNPIHAV QLRP M+H   + SK +
Sbjct: 174  ADPRVSMTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRR 233

Query: 1724 SVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQ 1545
            +   SN+ D  K EE   G             EQ KD+ EDW+PL YHGA SD++  Y++
Sbjct: 234  TTASSNLEDNTKGEEVTTGSLKKQGKPSGPVIEQNKDTREDWIPLNYHGARSDISMSYVR 293

Query: 1544 KMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPP 1365
            KM+  + S I FSM ++DY+N+LCPGTS++   S GPS RVLL+LPL+ERFRTWLLQGPP
Sbjct: 294  KMVEHDSSHIQFSM-NHDYVNTLCPGTSNENNGSNGPS-RVLLSLPLEERFRTWLLQGPP 351

Query: 1364 VHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLF 1185
            +HRFDALKHL  D SVE++L VL  HA++VQGLW+PKSSL+YG DQGI  LARDYVLLLF
Sbjct: 352  IHRFDALKHLAPDASVEDILAVLSQHAQLVQGLWIPKSSLLYGKDQGIDALARDYVLLLF 411

Query: 1184 SKNVIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQX 1008
            S+  II +SQLP   KL  AM+DVL+ +A +R +  DWK KE PD +F+K NP +V++Q 
Sbjct: 412  SRTPIINNSQLPQQQKLNRAMRDVLDTVAFERVSLNDWKFKEPPDMTFIKLNPKIVREQE 471

Query: 1007 XXXXXXEKIINDTI-GGRNGPGKKSD----TTTNPATSKSSSKVTARTPKVANSRTAMSE 843
                  EK+I + I G +N P  K+     TT NPATSKS SK  + +      R  MSE
Sbjct: 472  QTWERLEKLITEKIFGDKNRPATKNSSRPLTTNNPATSKSLSKHASNSLNAGVPRRPMSE 531

Query: 842  EVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAYPDE 663
            E REA+ KALQKLF+S K+C FQQI Q LR+MAVSES+R  GFAREA+ AA+ ++A P+E
Sbjct: 532  ETREALPKALQKLFQSHKVC-FQQICQRLREMAVSESSRPKGFAREAIAAAHGVEAPPEE 590

Query: 662  LQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMEL 483
            LQ II+QVA+NIHG+ V KSSP +P++D F                              
Sbjct: 591  LQAIISQVAINIHGVYVLKSSPVHPEHDEF------------------------------ 620

Query: 482  KREISQIEYQKVLQELCLSQGSAWILRSAGGNTK 381
                       V+QELC+SQGSAW+L+S  GN K
Sbjct: 621  -----------VVQELCVSQGSAWVLKSGDGNPK 643


>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  537 bits (1383), Expect = e-150
 Identities = 296/577 (51%), Positives = 376/577 (65%), Gaps = 12/577 (2%)
 Frame = -1

Query: 2075 PCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADP 1896
            P  D  T++YVLQYPLR  WRPYEL +RC+EVRVKPAS EVE+DL++ VDSKNYD  A  
Sbjct: 113  PPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPN 172

Query: 1895 RVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVG 1716
              +MKKQ L+TSW+P   +GY VGVL GNKLHLNPIHAV QLRP ME++ S  +K K+  
Sbjct: 173  AQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNV 232

Query: 1715 PSNVNDTVK----SEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYL 1548
              + N  VK    +EE   G             EQ  D+ E WVPLKYH + SD + RYL
Sbjct: 233  TGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLKYHSSESDFSARYL 292

Query: 1547 QKMMAREVSQISFSMSSNDYLNSLC-PGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQG 1371
            QKM+A + S I F MS  +Y+NSLC PG S+D   SKG S R LL++PL+ERF+T L +G
Sbjct: 293  QKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEG 352

Query: 1370 PPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLL 1191
            PPVHRF ALKH   D SVE+VL VL  HA +VQGLWVPKSSL++   QG+  LARDY+LL
Sbjct: 353  PPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILL 412

Query: 1190 LFSKNVIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKK 1014
            LFSK  +I  SQ+     L  A+K  L++LAV+R +F+DWK KE  D SF+K +P +V++
Sbjct: 413  LFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVRE 472

Query: 1013 QXXXXXXXEKIINDTI--GGRNGP----GKKSDTTTNPATSKSSSKVTARTPKVANSRTA 852
            Q       EK I D I  GGR GP      K        TS  S   T  T      RTA
Sbjct: 473  QRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTA 532

Query: 851  MSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAY 672
            MS E REA+ KAL+++F+  K+CSFQ I Q LRD+AVS+S       R  V AA   DA 
Sbjct: 533  MSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPRTFVAAAYGADAP 592

Query: 671  PDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASK 492
             +EL  II++ A  +HG+ V K+S ++ +++P RKVV+DLF  + PNAKLK+A I+EA+K
Sbjct: 593  QEELHAIISKYATTVHGVYVWKTS-EHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAK 651

Query: 491  MELKREISQIEYQKVLQELCLSQGSAWILRSAGGNTK 381
            + LK+EI+  EY KV+ ELC S+GS W+L+S  G  K
Sbjct: 652  IALKKEITTHEYNKVVSELCESRGSLWVLKSGDGKPK 688


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
            vinifera]
          Length = 672

 Score =  526 bits (1356), Expect = e-146
 Identities = 293/575 (50%), Positives = 375/575 (65%), Gaps = 10/575 (1%)
 Frame = -1

Query: 2075 PCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADP 1896
            P  D  T++YVLQYPLR  WRPYEL +RC+EVRVKPAS EVE+DL++ VDSKNYD  A  
Sbjct: 113  PPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPN 172

Query: 1895 RVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVG 1716
              +MKKQ L+TSW+P   +GY VGVL GNKLHLNPIHAV QLRP ME++ S  +K K+  
Sbjct: 173  AQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNV 232

Query: 1715 PSNVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDS--EEDWVPLKYHGASSDLTERYLQK 1542
              + N  VK E   E              E++  S  ++ WVPLKYH + SD + RYLQK
Sbjct: 233  TGDTNSAVKLEVSNE--------------EESVGSLKKQSWVPLKYHSSESDFSARYLQK 278

Query: 1541 MMAREVSQISFSMSSNDYLNSLC-PGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPP 1365
            M+A + S I F MS  +Y+NSLC PG S+D   SKG S R LL++PL+ERF+T L +GPP
Sbjct: 279  MVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPP 338

Query: 1364 VHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLF 1185
            VHRF ALKH   D SVE+VL VL  HA +VQGLWVPKSSL++   QG+  LARDY+LLLF
Sbjct: 339  VHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLF 398

Query: 1184 SKNVIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQX 1008
            SK  +I  SQ+     L  A+K  L++LAV+R +F+DWK KE  D SF+K +P +V++Q 
Sbjct: 399  SKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQR 458

Query: 1007 XXXXXXEKIINDTI--GGRNGP----GKKSDTTTNPATSKSSSKVTARTPKVANSRTAMS 846
                  EK I D I  GGR GP      K        TS  S   T  T      RTAMS
Sbjct: 459  RVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMS 518

Query: 845  EEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAYPD 666
             E REA+ KAL+++F+  K+CSFQ I Q LRD+AVS+S       R  V AA   DA  +
Sbjct: 519  AETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPRTFVAAAYGADAPQE 578

Query: 665  ELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKME 486
            EL  II++ A  +HG+ V K+S ++ +++P RKVV+DLF  + PNAKLK+A I+EA+K+ 
Sbjct: 579  ELHAIISKYATTVHGVYVWKTS-EHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIA 637

Query: 485  LKREISQIEYQKVLQELCLSQGSAWILRSAGGNTK 381
            LK+EI+  EY KV+ ELC S+GS W+L+S  G  K
Sbjct: 638  LKKEITTHEYNKVVSELCESRGSLWVLKSGDGKPK 672


>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X1 [Solanum tuberosum]
          Length = 669

 Score =  523 bits (1346), Expect = e-145
 Identities = 286/571 (50%), Positives = 381/571 (66%), Gaps = 8/571 (1%)
 Frame = -1

Query: 2078 SPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGAD 1899
            +P  DP T+LYV QYPLR  WRPYEL++RC+EVR++P++ E+E+DL + +DSKN+D  + 
Sbjct: 103  NPSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSV 162

Query: 1898 PRVQMKKQILTTSWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSK 1725
                +KKQ+L+TSW P  +  SGYAVGVL G+KLHLNP+HAV QLRP   ++   E K K
Sbjct: 163  HAATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELK-K 221

Query: 1724 SVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQ 1545
            +V  +N   +V++E+ +E                 KD  E W+ LKYHGA SD++ RYLQ
Sbjct: 222  NVTTNNDEKSVENEDVKEKRPMGPSKKQNKPPGIEKDIGEHWLHLKYHGARSDISARYLQ 281

Query: 1544 KMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPP 1365
            KM   E S + FSMS  DYLN+  PG  +D    K    R L  LPL+ER RTWLL+GPP
Sbjct: 282  KMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEERVRTWLLEGPP 340

Query: 1364 VHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLF 1185
            +HRFDALKHL  D S +E++RVLQ +A++VQGLWVPKSSLVYGT+ G++VLAR++VL  F
Sbjct: 341  IHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEF 400

Query: 1184 SKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQX 1008
            +K ++IK S      +   A    L  LAV+R +  DWKLKE PD  F      VV+++ 
Sbjct: 401  TKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREKQ 460

Query: 1007 XXXXXXEKIINDTI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVANS---RTAMSEE 840
                   K IND + GGRN P     T  NP    +         K  +S   RT+MSEE
Sbjct: 461  ATWECLGKQINDVLPGGRNRP-----TMKNPLNPNADIPALPSGDKPTSSSLLRTSMSEE 515

Query: 839  VREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSI-DAYPDE 663
            +REA+ KALQ++F++ K+CSFQQI Q LR + VS+S    G  R+A+ A+  + DA  +E
Sbjct: 516  IREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITASIDVFDAPQEE 575

Query: 662  LQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMEL 483
            +Q +INQVAVNIHG+ V KSSPDNPQYD  RKVVIDLF+AE P+AKLKKA++ EA+K++L
Sbjct: 576  IQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKKASVTEAAKLQL 635

Query: 482  KREISQIEYQKVLQELCLSQGSAWILRSAGG 390
             R+I+ +E+ KV++ELC S+ SAW+LRS  G
Sbjct: 636  NRDITNVEFLKVMKELCHSEKSAWVLRSGDG 666


>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
            lycopersicum]
          Length = 669

 Score =  519 bits (1336), Expect = e-144
 Identities = 283/574 (49%), Positives = 381/574 (66%), Gaps = 11/574 (1%)
 Frame = -1

Query: 2078 SPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGAD 1899
            +P  DP T+LYV QYPL+  WRPYEL++RC+EVR++P++ E+E+DL + +DSKN+D  + 
Sbjct: 103  NPSFDPSTQLYVFQYPLKAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSV 162

Query: 1898 PRVQMKKQILTTSWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSK 1725
                +KKQ+L+TSW P  +  SGYAVGVL G+KLHLNP+HAV QLRP   ++   E K K
Sbjct: 163  HAATVKKQMLSTSWIPLPTCTSGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELK-K 221

Query: 1724 SVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQ 1545
            ++  +N   +V++E+ +E                 KD  E W+ LKYHGA SD++ RYLQ
Sbjct: 222  NIITNNDEKSVENEDVKEKRPVGPSKKQNKSPGIEKDIGEHWLHLKYHGARSDISARYLQ 281

Query: 1544 KMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPP 1365
            KM   E S + FSMS  DYLN+ CPG  +D    K    R L  LPL+ER R WLL+GPP
Sbjct: 282  KMSMEEGSPVPFSMSPVDYLNAFCPGRPTDTDRLKILRTR-LSQLPLEERVRIWLLEGPP 340

Query: 1364 VHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLF 1185
            +HRFDAL HL  D S +E++RVLQ +A++VQGLWVPKSSLVYGT+ G++VLAR++VL  F
Sbjct: 341  IHRFDALMHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEF 400

Query: 1184 SKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQX 1008
            +K ++IK S      +   A    L  LAV+R +  DWKLKE PD  F      VV++Q 
Sbjct: 401  TKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREQQ 460

Query: 1007 XXXXXXEKIINDTI-GGRNGPGKKS------DTTTNPATSKSSSKVTARTPKVANSRTAM 849
                   K IND + GGR  P  K+      D T  P+  K +S    RT        +M
Sbjct: 461  ATWECLGKQINDVLPGGRTRPTMKNPINRNADITALPSGDKPTSSSLLRT--------SM 512

Query: 848  SEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSI-DAY 672
            SEE+REA+ KALQ++F++ K+CSFQQI Q LR + VS+S    G  R+A+ A+  + DA 
Sbjct: 513  SEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITASVDVFDAP 572

Query: 671  PDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASK 492
             +E+Q +INQVAVNIHG+ V KSSPDNPQYD  RK+VIDLF+AE P+AKLKKA++ EA+K
Sbjct: 573  QEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKIVIDLFMAEGPSAKLKKASVTEAAK 632

Query: 491  MELKREISQIEYQKVLQELCLSQGSAWILRSAGG 390
            ++L R+I+ +E+ KV++ELC S+ SAW+LRS  G
Sbjct: 633  LQLNRDITNVEFLKVMKELCHSEKSAWVLRSGDG 666


>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X2 [Solanum tuberosum]
          Length = 657

 Score =  516 bits (1329), Expect = e-143
 Identities = 283/571 (49%), Positives = 380/571 (66%), Gaps = 8/571 (1%)
 Frame = -1

Query: 2078 SPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGAD 1899
            +P  DP T+LYV QYPLR  WRPYEL++RC+EVR++P++ E+E+DL + +DSKN+D  + 
Sbjct: 103  NPSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSV 162

Query: 1898 PRVQMKKQILTTSWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSK 1725
                +KKQ+L+TSW P  +  SGYAVGVL G+KLHLNP+HAV QLRP   ++   E K K
Sbjct: 163  HAATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELK-K 221

Query: 1724 SVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQ 1545
            +V  +N   +V++E+ +E                    ++ W+ LKYHGA SD++ RYLQ
Sbjct: 222  NVTTNNDEKSVENEDVKE------------KRPMGPSKKQHWLHLKYHGARSDISARYLQ 269

Query: 1544 KMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPP 1365
            KM   E S + FSMS  DYLN+  PG  +D    K    R L  LPL+ER RTWLL+GPP
Sbjct: 270  KMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEERVRTWLLEGPP 328

Query: 1364 VHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLF 1185
            +HRFDALKHL  D S +E++RVLQ +A++VQGLWVPKSSLVYGT+ G++VLAR++VL  F
Sbjct: 329  IHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEF 388

Query: 1184 SKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQX 1008
            +K ++IK S      +   A    L  LAV+R +  DWKLKE PD  F      VV+++ 
Sbjct: 389  TKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREKQ 448

Query: 1007 XXXXXXEKIINDTI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVANS---RTAMSEE 840
                   K IND + GGRN P     T  NP    +         K  +S   RT+MSEE
Sbjct: 449  ATWECLGKQINDVLPGGRNRP-----TMKNPLNPNADIPALPSGDKPTSSSLLRTSMSEE 503

Query: 839  VREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSI-DAYPDE 663
            +REA+ KALQ++F++ K+CSFQQI Q LR + VS+S    G  R+A+ A+  + DA  +E
Sbjct: 504  IREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITASIDVFDAPQEE 563

Query: 662  LQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMEL 483
            +Q +INQVAVNIHG+ V KSSPDNPQYD  RKVVIDLF+AE P+AKLKKA++ EA+K++L
Sbjct: 564  IQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKKASVTEAAKLQL 623

Query: 482  KREISQIEYQKVLQELCLSQGSAWILRSAGG 390
             R+I+ +E+ KV++ELC S+ SAW+LRS  G
Sbjct: 624  NRDITNVEFLKVMKELCHSEKSAWVLRSGDG 654


>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
            gi|550334731|gb|EEE90658.2| hypothetical protein
            POPTR_0007s12540g [Populus trichocarpa]
          Length = 667

 Score =  505 bits (1300), Expect = e-140
 Identities = 274/571 (47%), Positives = 370/571 (64%), Gaps = 6/571 (1%)
 Frame = -1

Query: 2084 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 1905
            Y++P VDP T+LYV+QYPLR  WRPYELD+RC+EVRVKP S EVE+DL++  D+KNYD  
Sbjct: 118  YYTPSVDPNTQLYVMQYPLRPCWRPYELDERCKEVRVKPESTEVEVDLSID-DTKNYDPD 176

Query: 1904 ADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSK 1725
               R+ MKKQ L++SW P   +GYAVGVL GNKLHLNPIHAV QLRP M+++ S  SK K
Sbjct: 177  IASRLNMKKQTLSSSWSPPPATGYAVGVLIGNKLHLNPIHAVVQLRPSMDYLSSGNSKGK 236

Query: 1724 SVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQ 1545
                S  +    +E    G            +EQ  D EE W+PLKYHG+ SDL+ RYLQ
Sbjct: 237  KNATSGEDS---NEGKPLGLPKKQSKQMSSGNEQKPDVEESWIPLKYHGSKSDLSSRYLQ 293

Query: 1544 KMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPP 1365
             M+A E S I F+M+  DY++SLCPG S++     GPS RVLL+LPL+ER +   L+GPP
Sbjct: 294  NMVAPESSTIEFAMNPYDYMSSLCPGISNNNIKLNGPSRRVLLSLPLEERIKRLFLEGPP 353

Query: 1364 VHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGT---DQGIKVLARDYVL 1194
            +HRF AL+HLI ++S+E++L VLQ++ ++VQGLWVPK+SL++      + +K+ ARDY+L
Sbjct: 354  IHRFAALRHLIPNDSIEDLLIVLQEYGQLVQGLWVPKTSLLFPNPKPTEKVKLAARDYIL 413

Query: 1193 LLFSKNVIIKDSQLPNNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKK 1014
            LLFSK++++  S+L        +K  LN+ AV+R +FKDWK KE  D  FV+  P +V+K
Sbjct: 414  LLFSKSLVVTPSELNVPMKPLILKSFLNIFAVERPSFKDWKFKENVDTLFVELYPDIVRK 473

Query: 1013 QXXXXXXXEKIINDTIGGRNGPGKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEVR 834
            Q        K I+                      KS SK     PK       M++E R
Sbjct: 474  QEQAWEVMGKNISAAF---------------DRAGKSVSKNVITKPK-----KTMTDETR 513

Query: 833  EAITKALQKLFKSVKIC--SFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAYPDEL 660
            EA+ KAL K+ ++ K+C   FQ I Q LR +A+S+S       R AV AA+  +A P+EL
Sbjct: 514  EALRKALPKVLQTHKVCRYGFQMICQGLRQLAISQSTLPKADPRIAVAAASGAEAPPEEL 573

Query: 659  QTIINQVAVNIHGICVPKSSPDNPQYDPF-RKVVIDLFVAEVPNAKLKKATILEASKMEL 483
            Q +I++VA NIHG  V KSSP++P +DP  RKVVI LF+A  PNA +KK+ +  A+++EL
Sbjct: 574  QEVISEVATNIHGFYVLKSSPEHPDFDPLSRKVVIGLFLARGPNANIKKSEVQAAARLEL 633

Query: 482  KREISQIEYQKVLQELCLSQGSAWILRSAGG 390
            KRE S  EY KV+ +LC S+GSAW+L+S  G
Sbjct: 634  KREPSNSEYIKVMTDLCESKGSAWVLKSGDG 664


>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  503 bits (1296), Expect = e-139
 Identities = 281/577 (48%), Positives = 374/577 (64%), Gaps = 12/577 (2%)
 Frame = -1

Query: 2084 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 1905
            +F+P +D  T+LYVLQYPLR  WRPYELD+RCEEVRVKPAS EVE+DL V VDS NYDS 
Sbjct: 128  FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 187

Query: 1904 ADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSK 1725
               R++M KQ L++SW P   +GYAVGVL G+KLHLNPIHAV QLRP M H+    SK K
Sbjct: 188  RASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRK 247

Query: 1724 SVGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTE 1557
            +   ++   TVK EEP +    G            +EQ  D +E WVPLKYH + +D + 
Sbjct: 248  NAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSA 307

Query: 1556 RYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLL 1377
            +YLQ+MMA E  +I F+MS  DY++SLCPG S++   ++GPS R+LL++PL+ER +  L 
Sbjct: 308  QYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLSIPLEERLKKLLS 366

Query: 1376 QGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYV 1197
            +GPP HRF ALKH   D S+E++  VLQ HA +VQGLWVPKSSL++  D   K LARDYV
Sbjct: 367  EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDP-YKSLARDYV 425

Query: 1196 LLLFSKNVIIKDSQLPNNKLAPAMKD----VLNVLAVKRDNFKDWKLKELPDFSFVKSNP 1029
            LLLFSKN II  +Q+  + L+P+ K+     L +LA++R +FKDWKLKE  D  F K  P
Sbjct: 426  LLLFSKNPIISLAQV--HALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYP 483

Query: 1028 SVVKKQXXXXXXXEKIINDTI--GGRNGPGK-KSDTTTNPATSKSSSKVTARTPKVANSR 858
             +VK Q       E  + + I  G + GP + K  T   P  + +S K   R      + 
Sbjct: 484  DIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAG 543

Query: 857  TAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSID 678
              MS+E REAI KAL+K+F++ K+CS Q I + LRD+A+S+S      AR  V AA   D
Sbjct: 544  RTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADARMVVKAAYGAD 603

Query: 677  AYPDELQTIINQVAVNIH-GICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILE 501
            A   ELQ ++++VAV +H G+ V +SSP++P+YDP R+VVI+L   +    KLKKA +  
Sbjct: 604  APEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLLRVK---GKLKKADVSA 660

Query: 500  ASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGG 390
            A+ + LKREIS  EY KV+ + C  + S W+L+S  G
Sbjct: 661  AALLSLKREISNNEYNKVMSDFCEYKSSWWVLKSGDG 697


>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis
            sativus]
          Length = 702

 Score =  499 bits (1285), Expect = e-138
 Identities = 278/578 (48%), Positives = 364/578 (62%), Gaps = 11/578 (1%)
 Frame = -1

Query: 2081 FSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGA 1902
            F+P VD  ++LYVLQYPLR +WRPYE + RC+EVRVKP++ EVE+DL V ++S NYD+ A
Sbjct: 128  FTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIESNNYDNKA 187

Query: 1901 DPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKS 1722
            D   QMKKQ LT+SW+P   + YAVG+L GNKLHLNP+HAV QLRP  EH++S   K K+
Sbjct: 188  DGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNSGGPKRKN 247

Query: 1721 VGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTER 1554
                  +  VKSEE  +    G            +E     EE W+PLKY+G  SDL+ R
Sbjct: 248  --NVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLESDLSTR 305

Query: 1553 YLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQ 1374
            +LQ M+++ VS + FSMS +DY++SLCPGTS+ G   KGPS + LL+L L+ER +  L +
Sbjct: 306  HLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIKKLLTE 365

Query: 1373 GPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVL 1194
            GPPV RF ALKH   D   EE +  LQ +A++VQGLWVPKS  +   D G    ARD+VL
Sbjct: 366  GPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQD-GSGRCARDFVL 424

Query: 1193 LLFSKNVIIKDSQLPNNK-LAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVK 1017
             LFSKN ++  SQ+   K L   +K  LN+  V+R  FKDWK KE  D  F+ ++  + +
Sbjct: 425  FLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHVRIAE 484

Query: 1016 KQXXXXXXXEKIIN-----DTIGGRNGPGKKSDTTTNPATSKSSSKVTARTPKVA-NSRT 855
            KQ       EK         ++   N    K           SS + T ++     N + 
Sbjct: 485  KQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPLNRKG 544

Query: 854  AMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDA 675
            AMS+E REA+ KALQKLF++ K+CSFQ I Q LRD+AVS+S      AR AV AA  +DA
Sbjct: 545  AMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAYGVDA 604

Query: 674  YPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEAS 495
             PDEL+ II+QVA  IHG+ V  SSP++P+YDP RKVVI L     P A LKKA +LEAS
Sbjct: 605  PPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEAS 664

Query: 494  KMELKREISQIEYQKVLQELCLSQGSAWILRSAGGNTK 381
            K EL R I+  EY KV+ E+C+S GS+W L+S  GN++
Sbjct: 665  KHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 677

 Score =  499 bits (1284), Expect = e-138
 Identities = 273/555 (49%), Positives = 365/555 (65%), Gaps = 9/555 (1%)
 Frame = -1

Query: 2084 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 1905
            +F+P +D  T+LYV+QYPLR  WRPYELD+RCEEVRVKP S EVE+DLT+  DS N+D  
Sbjct: 124  FFTPSIDSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEVDLTID-DSSNWDPA 182

Query: 1904 ADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSK 1725
               +   KKQ L+TS+ P  V+GYAVGVL GNKLHLNPIHAV QLRP +EHV+S +SK K
Sbjct: 183  QASKYNFKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVVQLRPSLEHVNSNDSKRK 242

Query: 1724 SVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQ 1545
            +   + +N  VK E+  EG                   ++ W+ LKYHG+ SD + RYL+
Sbjct: 243  N--SATLNPEVKLEDSNEGKPIG------------SSKKQCWISLKYHGSKSDFSSRYLE 288

Query: 1544 KMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPP 1365
            KM+A+E S + F+M+  DY++SLCP  S++   SKGP  R LL+LPL ER +  +L+GPP
Sbjct: 289  KMIAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLPLAERLKKLILEGPP 348

Query: 1364 VHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLF 1185
            V RF  LKH   D+SVE+VL+VLQ++ ++VQGLW PKSSL++  D   K   RDYVLLLF
Sbjct: 349  VQRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLF-PDANSKQGIRDYVLLLF 407

Query: 1184 SKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQX 1008
            SKN++I  SQ+    K+   +K  LN+ AV+R +FKDWK KE  D +F+K  P +VKKQ 
Sbjct: 408  SKNLVINSSQVNFPVKIKEEIKSFLNLFAVERPSFKDWKFKEHTDTTFIKLYPDIVKKQE 467

Query: 1007 XXXXXXEKIINDTIGGRNGPGKKSDTTTNPATSKSSSK---VTARTPKVAN-----SRTA 852
                  EK ++     R+G     +    P    ++ K        PK+A+     ++T 
Sbjct: 468  EAWDNTEKRLSKVFD-RSGKASMKNAIPKPPMVHNTVKHLDSEKSMPKIASGMRRLTKTT 526

Query: 851  MSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAY 672
            ++ E REA+ KAL K+F+S K+CSFQ I Q LRD+AVS+S       R AV AA+  DA 
Sbjct: 527  ITVETREALLKALPKVFQSHKVCSFQLICQGLRDLAVSQSTLPKADPRIAVAAASGADAP 586

Query: 671  PDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASK 492
            P+ELQ II+QVA NIHG  V KSSP++PQYD  RKV+IDL +A  PNAKLKKA + EA++
Sbjct: 587  PEELQEIISQVATNIHGFYVLKSSPEHPQYDELRKVIIDLLLARGPNAKLKKAEVFEAAR 646

Query: 491  MELKREISQIEYQKV 447
            +  KR+++ IEY K+
Sbjct: 647  LAFKRDVTNIEYNKL 661


>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit RPC5-like [Cucumis sativus]
          Length = 702

 Score =  498 bits (1283), Expect = e-138
 Identities = 278/578 (48%), Positives = 363/578 (62%), Gaps = 11/578 (1%)
 Frame = -1

Query: 2081 FSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGA 1902
            F+P VD  ++LYVLQYPLR +WRPYE + RC+EVRVKP++ EVE+DL V ++S NYD+ A
Sbjct: 128  FTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIESNNYDNKA 187

Query: 1901 DPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKS 1722
            D   QMKKQ LT+SW+P   + YAVG+L GNKLHLNP+HAV QLRP  EH++S   K K+
Sbjct: 188  DGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNSGGPKRKN 247

Query: 1721 VGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTER 1554
                  +  VKSEE  +    G            +E     EE W+PLKY+G  SDL+ R
Sbjct: 248  --NVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLESDLSTR 305

Query: 1553 YLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQ 1374
            +LQ M+++ VS + FSMS +DY++SLCPGTS+ G   KGPS + LL+L L+ER +  L +
Sbjct: 306  HLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIKKLLTE 365

Query: 1373 GPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVL 1194
            GPPV RF ALKH   D   EE +  LQ +A++VQGLWVPKS  +   D G    ARD+VL
Sbjct: 366  GPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQD-GSGRCARDFVL 424

Query: 1193 LLFSKNVIIKDSQLPNNK-LAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVK 1017
             LFSKN ++  SQ+   K L   +K  LN+  V+R  FKDWK KE  D  F+ ++  + +
Sbjct: 425  FLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHVRIAE 484

Query: 1016 KQXXXXXXXEKIIN-----DTIGGRNGPGKKSDTTTNPATSKSSSKVTARTPKVA-NSRT 855
            KQ       EK         ++   N    K           SS + T ++     N + 
Sbjct: 485  KQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPLNRKG 544

Query: 854  AMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDA 675
            AMS+E REA+ KALQKLF++ K+CSFQ I Q LRD+AVS+S      AR AV AA  +DA
Sbjct: 545  AMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAYGVDA 604

Query: 674  YPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEAS 495
             PDEL  II+QVA  IHG+ V  SSP++P+YDP RKVVI L     P A LKKA +LEAS
Sbjct: 605  PPDELXKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEAS 664

Query: 494  KMELKREISQIEYQKVLQELCLSQGSAWILRSAGGNTK 381
            K EL R I+  EY KV+ E+C+S GS+W L+S  GN++
Sbjct: 665  KHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702


>gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]
          Length = 666

 Score =  494 bits (1273), Expect = e-137
 Identities = 281/561 (50%), Positives = 362/561 (64%), Gaps = 15/561 (2%)
 Frame = -1

Query: 2084 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 1905
            YF+P +DP T+LYVLQ P+R  WRPYEL++RC+EVR++P + ++E+DL +  DSKN+D  
Sbjct: 103  YFTPSLDPNTQLYVLQSPMRPVWRPYELEERCKEVRLRPTTAQMEVDLAIDFDSKNFDRD 162

Query: 1904 ADPRVQMKKQILTTSW--EPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESK 1731
            +    +M+KQ ++TSW   P+  SGYAVGVL G+KLHLNPIH V QLRP  +H+   E K
Sbjct: 163  SIYAEKMEKQTVSTSWIPVPTGTSGYAVGVLIGDKLHLNPIHTVVQLRPSKQHLKESELK 222

Query: 1730 SKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERY 1551
             K++  SN   TV++EE +E                 KD EE WV LKYHGA S+++ RY
Sbjct: 223  -KNIATSNDEKTVENEEIKENKPVAPSKKQNKPPGNDKDIEEHWVHLKYHGARSEISARY 281

Query: 1550 LQKMMAREVSQISFSMSSN----------DYLNSLCPGTSSDGFSSKGPSIRVLLTLPLK 1401
            LQ+M   E S I FSMS            DYL +LCPG  +D    K   IRV   LPL 
Sbjct: 282  LQRMAMEEGSPIPFSMSLAFFSVNLIHRVDYLRTLCPGRPNDTDKYKDLRIRVS-QLPLD 340

Query: 1400 ERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGI 1221
            ERFRTWL +GPP+HRF ALKHL  D  VEE+L VLQ +A+VVQGLWVPKSSLVYG + G 
Sbjct: 341  ERFRTWLHEGPPIHRFGALKHLALDNPVEEILEVLQRYAQVVQGLWVPKSSLVYGRNDGH 400

Query: 1220 KVLARDYVLLLFSKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSF 1044
            +VLARD+VL  FSK+  IK S      +   A    L +LAV+R +  DWKLKE PD  F
Sbjct: 401  EVLARDFVLFEFSKSPFIKQSVFDRKPEFFKAATPALKLLAVERPDLNDWKLKEHPDKEF 460

Query: 1043 VKSNPSVVKKQXXXXXXXEKIINDTI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVA 867
                  +VK+Q        K I   + GGRN P  K+   +NP+    +     +    +
Sbjct: 461  ENLYGDLVKEQQVTWERLGKQIYGLLAGGRNRPTMKN--PSNPSAGIPALPSGGKPTPRS 518

Query: 866  NSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAAN 687
             +RT+MSE  REA+ KALQK+F++ K+CSFQQI   LR+ AVSE+ R  G A+ AV AA+
Sbjct: 519  VTRTSMSERTREALQKALQKVFRTHKVCSFQQIRLRLREAAVSENDRPKGNAKGAVAAAS 578

Query: 686  SI-DAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKAT 510
             + DA P+ELQ +I+QVA NIHG  V KSSPDNPQYD  RKVV++L + E P+AKLKKAT
Sbjct: 579  FVDDAPPEELQAVIDQVAFNIHGDYVLKSSPDNPQYDALRKVVVELLIGEGPSAKLKKAT 638

Query: 509  ILEASKMELKREISQIEYQKV 447
            I++A+K EL R+I   E+QKV
Sbjct: 639  IMKAAKSELNRDIPPAEFQKV 659


>gb|EOX91149.1| Transcription regulators,zinc ion binding, putative isoform 2
            [Theobroma cacao]
          Length = 588

 Score =  489 bits (1260), Expect = e-135
 Identities = 275/562 (48%), Positives = 365/562 (64%), Gaps = 12/562 (2%)
 Frame = -1

Query: 2084 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 1905
            +F+P +D  T+LYVLQYPLR  WRPYELD+RCEEVRVKPAS EVE+DL V VDS NYDS 
Sbjct: 31   FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 90

Query: 1904 ADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSK 1725
               R++M KQ L++SW P   +GYAVGVL G+KLHLNPIHAV QLRP M H+    SK K
Sbjct: 91   RASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRK 150

Query: 1724 SVGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTE 1557
            +   ++   TVK EEP +    G            +EQ  D +E WVPLKYH + +D + 
Sbjct: 151  NAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSA 210

Query: 1556 RYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLL 1377
            +YLQ+MMA E  +I F+MS  DY++SLCPG S++   ++GPS R+LL++PL+ER +  L 
Sbjct: 211  QYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLSIPLEERLKKLLS 269

Query: 1376 QGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYV 1197
            +GPP HRF ALKH   D S+E++  VLQ HA +VQGLWVPKSSL++  D   K LARDYV
Sbjct: 270  EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDP-YKSLARDYV 328

Query: 1196 LLLFSKNVIIKDSQLPNNKLAPAMKD----VLNVLAVKRDNFKDWKLKELPDFSFVKSNP 1029
            LLLFSKN II  +Q+  + L+P+ K+     L +LA++R +FKDWKLKE  D  F K  P
Sbjct: 329  LLLFSKNPIISLAQV--HALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYP 386

Query: 1028 SVVKKQXXXXXXXEKIINDTI--GGRNGPGK-KSDTTTNPATSKSSSKVTARTPKVANSR 858
             +VK Q       E  + + I  G + GP + K  T   P  + +S K   R      + 
Sbjct: 387  DIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAG 446

Query: 857  TAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSID 678
              MS+E REAI KAL+K+F++ K+CS Q I + LRD+A+S+S      AR  V AA   D
Sbjct: 447  RTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADARMVVKAAYGAD 506

Query: 677  AYPDELQTIINQVAVNIH-GICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILE 501
            A   ELQ ++++VAV +H G+ V +SSP++P+YDP R+VVI+L   +    KLKKA +  
Sbjct: 507  APEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLLRVK---GKLKKADVSA 563

Query: 500  ASKMELKREISQIEYQKVLQEL 435
            A+ + LKREIS  EY K L+ +
Sbjct: 564  AALLSLKREISNNEYNKALRNM 585


>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
            [Theobroma cacao]
          Length = 736

 Score =  487 bits (1254), Expect = e-135
 Identities = 279/610 (45%), Positives = 374/610 (61%), Gaps = 45/610 (7%)
 Frame = -1

Query: 2084 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 1905
            +F+P +D  T+LYVLQYPLR  WRPYELD+RCEEVRVKPAS EVE+DL V VDS NYDS 
Sbjct: 128  FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 187

Query: 1904 ADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSK 1725
               R++M KQ L++SW P   +GYAVGVL G+KLHLNPIHAV QLRP M H+    SK K
Sbjct: 188  RASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRK 247

Query: 1724 SVGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTE 1557
            +   ++   TVK EEP +    G            +EQ  D +E WVPLKYH + +D + 
Sbjct: 248  NAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSA 307

Query: 1556 RYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLL 1377
            +YLQ+MMA E  +I F+MS  DY++SLCPG S++   ++GPS R+LL++PL+ER +  L 
Sbjct: 308  QYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLSIPLEERLKKLLS 366

Query: 1376 QGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYV 1197
            +GPP HRF ALKH   D S+E++  VLQ HA +VQGLWVPKSSL++  D   K LARDYV
Sbjct: 367  EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDP-YKSLARDYV 425

Query: 1196 LLLFSKNVIIKDSQLPNNKLAPAMKD----VLNVLAVKRDNFKDWKLKELPDFSFVKSNP 1029
            LLLFSKN II  +Q+  + L+P+ K+     L +LA++R +FKDWKLKE  D  F K  P
Sbjct: 426  LLLFSKNPIISLAQV--HALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYP 483

Query: 1028 SVVKKQXXXXXXXEKIINDTI--GGRNGPGK-KSDTTTNPATSKSSSKVTARTPKVANSR 858
             +VK Q       E  + + I  G + GP + K  T   P  + +S K   R      + 
Sbjct: 484  DIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAG 543

Query: 857  TAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSID 678
              MS+E REAI KAL+K+F++ K+CS Q I + LRD+A+S+S      AR  V AA   D
Sbjct: 544  RTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADARMVVKAAYGAD 603

Query: 677  AYPDELQTIINQVAVNIH-GICVPKSSPDNPQYDPFR-------------KVVIDLFVAE 540
            A   ELQ ++++VAV +H G+ V +SSP++P+YDP R               ++ +F  +
Sbjct: 604  APEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLRLHKYVQLVFKWEEMFMVSMFFLQ 663

Query: 539  VPN--------------------AKLKKATILEASKMELKREISQIEYQKVLQELCLSQG 420
             P+                     KLKKA +  A+ + LKREIS  EY KV+ + C  + 
Sbjct: 664  NPSFSSELFFPCREVVINLLRVKGKLKKADVSAAALLSLKREISNNEYNKVMSDFCEYKS 723

Query: 419  SAWILRSAGG 390
            S W+L+S  G
Sbjct: 724  SWWVLKSGDG 733


>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
            gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC5-like [Citrus sinensis]
            gi|557527707|gb|ESR38957.1| hypothetical protein
            CICLE_v10025048mg [Citrus clementina]
          Length = 690

 Score =  484 bits (1246), Expect = e-134
 Identities = 268/570 (47%), Positives = 366/570 (64%), Gaps = 9/570 (1%)
 Frame = -1

Query: 2084 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 1905
            +F+P +D  ++LYV+QYPLR  WRPYELD+RCEEVRVKP++ EVE+DL++ VDS N+DS 
Sbjct: 120  FFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNWDSE 179

Query: 1904 ADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSK 1725
               R+ M KQ L+T+W P   +GYA+GVL GNKLHLNPIHAV QLR  M  + S  SK K
Sbjct: 180  KASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKSGGSKRK 239

Query: 1724 SVGPSNVNDTVK-SEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYL 1548
            +   S +   ++ S + +               EQ  + EE WVPLKYHG+ SD + RYL
Sbjct: 240  NNVASEIPVKLEDSNQDKSVGSSKKQNKRMGSIEQRSNEEECWVPLKYHGSKSDFSARYL 299

Query: 1547 QKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGP 1368
            Q+M+  E S I F+M+  DY++SLCPG  S+   SKGPS R LL++PL+ERF+  L +G 
Sbjct: 300  QRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMPLEERFKKLLCEGE 359

Query: 1367 PVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLL 1188
            PV RF  L H   +++VE+V+ VL  +  +VQGLW P+S L++  D+ +K LARDYVLL 
Sbjct: 360  PVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLFNNDK-MKCLARDYVLLS 418

Query: 1187 FSKNVIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQ 1011
            FSKN ++K   L  + KL   +K  LN+ AV+R +FKDWK ++  D SF+K +P++V KQ
Sbjct: 419  FSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQTDLSFIKEHPNIVIKQ 478

Query: 1010 XXXXXXXEKIINDTIG--GRNGPGKKSDTTTNPATSKSSSKV-TARTPKVA-NSRTAMSE 843
                   EK I D I   G++G   ++D   +   +K    + ++  P  A      +S 
Sbjct: 479  EQVWAAAEKQITDVINKLGKSGSTLRNDAGKSAMVNKHLKAINSSNGPSGALTGNKNLSN 538

Query: 842  EVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAY--- 672
            E REA+ KALQKLF+  K+CS   I Q LRD+A+S+S      AR  V+AA  +D+    
Sbjct: 539  ESREALPKALQKLFQIHKVCSLPLIKQGLRDLAISQSTLPKADARMTVLAAEIVDSSFVD 598

Query: 671  PDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASK 492
              E   +I+QVA NIHG  V KSS D PQ+ P RKVV DL +A  P+AKLKKA ++EA++
Sbjct: 599  TQEFAEVISQVATNIHGFYVSKSSED-PQHGPLRKVVTDLLLAGGPDAKLKKADVVEAAR 657

Query: 491  MELKREISQIEYQKVLQELCLSQGSAWILR 402
              LKREIS  EY KV+ ++C S+GSAWIL+
Sbjct: 658  HVLKREISNAEYSKVMSDICESKGSAWILK 687


>ref|XP_004232385.1| PREDICTED: uncharacterized protein LOC101252245 [Solanum
            lycopersicum]
          Length = 659

 Score =  461 bits (1187), Expect = e-127
 Identities = 253/560 (45%), Positives = 354/560 (63%), Gaps = 6/560 (1%)
 Frame = -1

Query: 2048 YVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQIL 1869
            YVLQYPLR +WRPY LD+RC++VR++P+S E+E+DL +  DSKN+D  +     +KKQI+
Sbjct: 114  YVLQYPLRSEWRPYGLDERCQDVRLRPSSAEMEVDLAIDFDSKNFDRDSVHAATIKKQIV 173

Query: 1868 TTSWEPSHV-SGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTV 1692
            +T W PS   + +AVG+  G+K HLNP+HA+ QLRP ++H   KES+ K++  SN   + 
Sbjct: 174  STKWVPSSTCADFAVGIFIGDKFHLNPVHAIVQLRPSLQH--RKESELKNLTTSNDEKSC 231

Query: 1691 KSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQIS 1512
            ++E+ +E                 KD  E W+ LKYHG  SD++ R+LQKM     S + 
Sbjct: 232  ENEDVKEKKPVGLSKKQNKLPGNYKDIGEHWLHLKYHGTRSDISARHLQKMAMEGGSPVP 291

Query: 1511 FSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKHLI 1332
            FSM  +DYLN++CP   +D    +    R L   P +ER RTWLL+GPP+HRFD LKHL 
Sbjct: 292  FSMIPSDYLNAICPARPTDIDRLRNLRTR-LSQKPFEERVRTWLLEGPPIHRFDTLKHLA 350

Query: 1331 QDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQL 1152
             D  V+E+L VL+  A++VQGLWV KSSLVY T+ G++VLAR++VL  F+K+ +IK S  
Sbjct: 351  PDNPVDEILEVLKSCAQLVQGLWVAKSSLVYDTNNGVEVLARNFVLYEFTKSTLIKKSVF 410

Query: 1151 PNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXEKIIN 975
                +   A   VL  LAV+R +  DWKLKELPD  F      VV++Q        K IN
Sbjct: 411  GRRPEFLKAATPVLKSLAVERPDLDDWKLKELPDKKFENLYGDVVREQEAIWESMGKQIN 470

Query: 974  DTI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVANS---RTAMSEEVREAITKALQK 807
            D + GGRN P     T  NP   K++    + + K   +   RT++SEE+R A+ KALQ 
Sbjct: 471  DIMHGGRNRP-----TLKNPLNPKANIPALSSSDKPTPTTFLRTSLSEEIRGALPKALQN 525

Query: 806  LFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAYPDELQTIINQVAVNI 627
            +F+  K+CS  QI +L+      ++  S          A   DA   E++ ++NQ+AVNI
Sbjct: 526  VFRIHKVCSLLQICELMEKEDPMKAIISP---------AGISDALRKEIEAVVNQIAVNI 576

Query: 626  HGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKREISQIEYQKV 447
            HG+ V KSSPDNPQYD  RKVVIDLF+AE  NAKLKKA+I+EA+K++L R+++ +E+QKV
Sbjct: 577  HGVYVLKSSPDNPQYDALRKVVIDLFMAEGSNAKLKKASIVEAAKLQLGRDVTTVEFQKV 636

Query: 446  LQELCLSQGSAWILRSAGGN 387
            ++ELC S+ SAW+L  +  N
Sbjct: 637  MKELCRSENSAWVLGISDSN 656


>ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula]
            gi|358344405|ref|XP_003636280.1| DNA-directed RNA
            polymerase III subunit RPC5 [Medicago truncatula]
            gi|355502215|gb|AES83418.1| DNA-directed RNA polymerase
            III subunit RPC5 [Medicago truncatula]
            gi|355513299|gb|AES94922.1| DNA-directed RNA polymerase
            III subunit RPC5 [Medicago truncatula]
          Length = 683

 Score =  456 bits (1172), Expect = e-125
 Identities = 251/582 (43%), Positives = 365/582 (62%), Gaps = 16/582 (2%)
 Frame = -1

Query: 2084 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 1905
            YFSP +D  T+LYV+QYPLR  WRPY+LD++CEEVR+KP + EVE+DL++ ++S N +  
Sbjct: 115  YFSPSIDNDTKLYVMQYPLRPSWRPYDLDEQCEEVRLKPGTSEVEVDLSIDLESYNVEKA 174

Query: 1904 ADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSK 1725
               +++  KQ L+T+W+P   +G AVG+L G+KLHL+PIHAV QLRP   ++DS  S+ K
Sbjct: 175  TADKLKYTKQTLSTTWKPPPANGCAVGLLMGDKLHLHPIHAVVQLRPSRHYLDSGGSEKK 234

Query: 1724 SVGPSNVND---TVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTER 1554
            +V  SN  +   T   E+  +G             EQ  DS + WVPL+YHG  SD++ R
Sbjct: 235  NVATSNNQNKQTTPSMEQKSDG---------APSIEQKSDSNQCWVPLEYHGCKSDISSR 285

Query: 1553 YLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQ 1374
            Y Q+M+  E S I+F MS+ DY+ +LCPG SS+   +KGPS R LL+LP+++R +T L++
Sbjct: 286  YFQQMVTHESSPINFEMSTYDYIATLCPGVSSNTL-AKGPSKRYLLSLPVEKRLQTLLIE 344

Query: 1373 GPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVL 1194
            GPP+HRF A+KH   + S +E+L VL+  A++++G WVP+SSL++ T  GI+ LAR+Y+L
Sbjct: 345  GPPLHRFSAIKHFAPECSDDELLSVLEKQAQLLRGYWVPRSSLLFPTG-GIESLARNYIL 403

Query: 1193 LLFSKNVIIKDSQ---LPNNKLAPAMKDVLNVLAVKRDNFKD----WKLKELPDFSFVKS 1035
            + F K++ +K  +   L   +L   MK  +   A+++ + K     WK KELPD SF+K 
Sbjct: 404  VRFHKSLTVKSDELRRLGGGELGNRMKHFVMQFALEKFDLKSKENYWKFKELPDESFIKE 463

Query: 1034 NPSVVKKQXXXXXXXEKIINDTIGGRNGPGKKSDTTTNPATSKSSSKVTARTPKVAN--- 864
             P VVKKQ       E  +N  IG   G  K     TN   + +    T   P+  +   
Sbjct: 464  FPIVVKKQEEIFKILENEVNSIIGTLGGKRKLKSAITNSGVNNALFTSTNSDPRATSLGE 523

Query: 863  ---SRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVA 693
                   MS E R A+  AL+KLF++ K+CSFQ I Q LR +A++++    G ++ +V A
Sbjct: 524  DPPRSMTMSSETRHALPIALKKLFQTHKVCSFQLICQELRGLALAQTMLPKGGSKMSVDA 583

Query: 692  ANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKA 513
            ANS+D   DEL+ I+ +VA +IHG  V KS+    Q DPFR VVID+     PN KLKKA
Sbjct: 584  ANSLDVPQDELKAILGEVACDIHGCYVLKSA----QNDPFRDVVIDMLRGSGPNGKLKKA 639

Query: 512  TILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGGN 387
             ILEA++ +L R++   EY K + ELC+S+GS W+L+S  G+
Sbjct: 640  EILEAARRKLGRDVPNNEYIKAVSELCVSKGSFWVLKSGDGS 681


>ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Glycine
            max]
          Length = 697

 Score =  452 bits (1164), Expect = e-124
 Identities = 257/588 (43%), Positives = 369/588 (62%), Gaps = 22/588 (3%)
 Frame = -1

Query: 2084 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 1905
            +FSP VD +T+LYV QYPLR  WRPY+LD++CEEVR+K  + EVEIDL++ +DS + D  
Sbjct: 117  FFSPSVDAQTQLYVFQYPLRPSWRPYDLDEQCEEVRLKTKTSEVEIDLSIDLDSDHIDKE 176

Query: 1904 ADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSK 1725
               +  + KQ L+T+W+PSH +G AVG+L G+KLHL+P+HAV QLRP ++H++S  SK K
Sbjct: 177  FATKYNITKQTLSTTWKPSHANGCAVGLLMGDKLHLHPVHAVVQLRPTLQHLNSGGSKRK 236

Query: 1724 SVGPSNVNDTVKSEEPQE-----GXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLT 1560
            +   +  N TVK E   E                   EQ  D +E WVPLKYH   SD++
Sbjct: 237  NAASTGANATVKIEGSNEEKSVATSKKQNKQTGPSIIEQKSDGDECWVPLKYHSCKSDIS 296

Query: 1559 ERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWL 1380
             RYLQ+M+ +E S I+F+M + DY+ +LCPG SS+    KG S R LL+LP++ER +  +
Sbjct: 297  SRYLQQMVTQESSPINFTMRAYDYVTALCPGGSSNNL-PKGLSKRYLLSLPVEERLKK-M 354

Query: 1379 LQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDY 1200
            L+  P+HRF A+KH   + S  E+L  LQ HA +V GLW  KSSL+Y  D G++ LARDY
Sbjct: 355  LEDRPLHRFSAIKHFAPEYSENELLGFLQQHAILVWGLWTAKSSLLY-PDGGVETLARDY 413

Query: 1199 VLLLFSKNVIIK--DSQLPNNKLAPAMKDVLNVLAVKRDNFKD--------WKLKELPDF 1050
             LLLFSK++ ++  D  +   +L   +++ L +  V+R++           WK +ELPD 
Sbjct: 414  SLLLFSKSLKVQFSDVSIRGGELVNRVRNCLKIFGVERNDLDKSTGKPNPYWKFRELPDE 473

Query: 1049 SFVKSNPSVVKKQXXXXXXXEKII---NDTIG----GRNGPGKKSDTTTNPATSKSSSKV 891
            SF K  P +V+KQ       EK +   +  +G    G+N    +   T    +  S  +V
Sbjct: 474  SFKKLYPDIVEKQEELFKGLEKQLSGFSSNVGKRKIGKNAVANQGVNTEVHKSESSDQRV 533

Query: 890  TARTPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFA 711
            T+   +V  ++  MS E R A+  AL+KLF++ K+CSF+ I + LR+MAVS++  S G +
Sbjct: 534  TS-LGRVPPAKMTMSNETRHALPIALKKLFQTHKVCSFKLICEGLREMAVSKAMLSKGDS 592

Query: 710  REAVVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPN 531
            + AV AA+S+D   +EL  +I++VA  I+G  V KSSPD    DPFR VVID+     PN
Sbjct: 593  KMAVDAAHSLDGPHNELMAVISEVACEINGSYVLKSSPD----DPFRDVVIDMLCGSGPN 648

Query: 530  AKLKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGGN 387
            AKLKKA ILEA++ +L RE++  EY KV+ ELC+S+GS W+L+S  G+
Sbjct: 649  AKLKKAEILEAARRKLGREVASNEYTKVMSELCVSKGSVWVLKSGDGS 696


>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
          Length = 732

 Score =  447 bits (1149), Expect = e-122
 Identities = 259/556 (46%), Positives = 344/556 (61%), Gaps = 11/556 (1%)
 Frame = -1

Query: 2084 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 1905
            +F+P +D  T+LYVLQYPLR  WRPYELD+RCEEVRVKPAS EVE+DL++ VDSKNYD  
Sbjct: 117  FFNPKIDEGTQLYVLQYPLRPSWRPYELDERCEEVRVKPASSEVEMDLSLDVDSKNYDPD 176

Query: 1904 ADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSK 1725
               R+ M KQ L  SW+    + YAVGVL GNKLHLN IHAV QLRP ++H+ S  SK K
Sbjct: 177  CGDRLNMTKQTLCCSWDQPRATRYAVGVLMGNKLHLNRIHAVMQLRPSLKHLISAGSKKK 236

Query: 1724 SVGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTE 1557
            +    +  DTVK EE       G             +Q    EE WVPLKYHG+ S+ + 
Sbjct: 237  NNVKVDAEDTVKLEESSGKKAIGSSKKQIKQENSSVKQKIADEEGWVPLKYHGSESESSV 296

Query: 1556 RYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLL 1377
            RYL+KM  +E S + F+MS  DYLNSLCPG+  +G   KGPS R LL+LPL+ER ++ L 
Sbjct: 297  RYLRKMAVQESSPLQFTMSPYDYLNSLCPGSCKNGNEPKGPSRRALLSLPLEERIKSLLC 356

Query: 1376 QG-PPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGT--DQGIKVLAR 1206
            +G  PVHRF  LKH   D + +E+L  LQ+HA +VQGLW PKSSL+ GT  + G + +AR
Sbjct: 357  EGLAPVHRFSVLKHFAPDCTTKEILDALQNHALLVQGLWAPKSSLLLGTSKETGAQRIAR 416

Query: 1205 DYVLLLFSKNVIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNP 1029
            DYVLLLF KN +   S L   + L  A+   LN+L V+R + KDWK K   D SF+K+ P
Sbjct: 417  DYVLLLFWKNPVFSFSSLHFPSSLKTAVNKFLNILGVERPSVKDWKFKGQTDISFIKNYP 476

Query: 1028 SVVKKQXXXXXXXEKIINDTIG-GRNGPG-KKSDTTTNPATSKSSSKVTARTPKVANSRT 855
             VVKKQ       E+ I +  G G++G G K +   + P    +S+K   +         
Sbjct: 477  DVVKKQEEVWGDLERDIMNMFGDGKSGRGPKNTSIPSRPVKPLNSNKGVPKGTSEVVGGK 536

Query: 854  AMSEEVREAI-TKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSID 678
             + +++RE + +K L K+ +  K+CS Q + Q LR++A+++        R A  AA    
Sbjct: 537  KIPDDIREVLCSKILPKVIQEHKVCSLQLMCQGLRELALNKLNLPKADDRFARAAACG-T 595

Query: 677  AYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEA 498
            A P EL  ++++ A+NIHG+ V KSS ++PQYDPFR VVIDL       AKLKKA I +A
Sbjct: 596  ASPGELVKLLDETAINIHGLYVLKSSAEHPQYDPFRNVVIDLLRQNGLAAKLKKAEIFDA 655

Query: 497  SKMELKREISQIEYQK 450
            +K  LKR+++  EY K
Sbjct: 656  AKNALKRDVTSNEYSK 671


>gb|ABU45208.1| unknown [Solanum bulbocastanum]
          Length = 654

 Score =  444 bits (1142), Expect = e-122
 Identities = 251/548 (45%), Positives = 344/548 (62%), Gaps = 14/548 (2%)
 Frame = -1

Query: 2048 YVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQIL 1869
            YVLQYPLR +WRPY LD++C++VR++P++ E+E+DL +  DSKN+D  +     +KKQI+
Sbjct: 114  YVLQYPLRSEWRPYGLDEKCQDVRLRPSTAEMEVDLAIDFDSKNFDRDSVHAATIKKQIV 173

Query: 1868 TTSWEP-SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTV 1692
            +T W P S  + +AVG+L G+KLHLNP+HAV QLRP ++H   KES+ K++  SN   T 
Sbjct: 174  STKWVPLSTCADFAVGILIGDKLHLNPVHAVVQLRPSLQH--RKESELKNLTTSNDEKTC 231

Query: 1691 KSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQIS 1512
            ++E+ +E                 KD  E W+ LKYHG  SD++ R+LQKM     S + 
Sbjct: 232  ENEDVKEKKPVGPSKKQNKPPGNYKDIGEHWLHLKYHGTRSDISARHLQKMAIEGGSPVP 291

Query: 1511 FSM---------SSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVH 1359
            FSM            DYLN++CP   +D    +    R L   P +ER RTWLLQGPP+H
Sbjct: 292  FSMIPFFRANLMHRGDYLNAICPARPTDIDRLRNLRTR-LSQKPFEERVRTWLLQGPPIH 350

Query: 1358 RFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSK 1179
            RFDALKHL  D  V+E+L VL+  A++VQGLWVPKSSLVY T+ G++VLAR++VL  F+K
Sbjct: 351  RFDALKHLAPDNPVDEILEVLKSCAQLVQGLWVPKSSLVYDTNNGVEVLARNFVLYEFTK 410

Query: 1178 NVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXX 1002
            N +IK S      +   A   VL  LAV+R +  DWKLKELPD  F      VV++Q   
Sbjct: 411  NTLIKKSVFGRRPEFLKAATPVLKSLAVERPDLDDWKLKELPDKKFENLYGDVVREQQAI 470

Query: 1001 XXXXEKIINDTI-GGRNGPGKKSD-TTTNPATSKSSSKVTARTPKVANSRTAMSEEVREA 828
                 K IND + GGRN P  K+     N     SS K T  T      RT+MSEE+R A
Sbjct: 471  WDSMGKQINDILHGGRNRPTMKNPLPKANLPALSSSDKPTPTT----FLRTSMSEEIRGA 526

Query: 827  ITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSI-DAYPDELQTI 651
            + KALQ +F+  K+CS  QI +++               ++A++A   + DA   E++ +
Sbjct: 527  LPKALQNIFRIHKVCSLLQICEMMEKED----------PKKAIIAPTGVSDALRKEIEAV 576

Query: 650  INQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKREI 471
            +NQ+AVNIHG+ V KSSPDNPQYD  RKVVIDLF+AE  +AKLKKA+I+EA+K++L R++
Sbjct: 577  VNQIAVNIHGVYVLKSSPDNPQYDALRKVVIDLFMAEGSSAKLKKASIVEAAKLQLGRDV 636

Query: 470  SQIEYQKV 447
            + +E+QKV
Sbjct: 637  TTVEFQKV 644