BLASTX nr result

ID: Rehmannia22_contig00022584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00022584
         (322 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322464.2| single-strand DNA endonuclease family protei...    75   9e-12
ref|XP_004173761.1| PREDICTED: flap endonuclease GEN-like 2-like...    68   1e-09
ref|XP_004140848.1| PREDICTED: flap endonuclease GEN-like 2-like...    68   1e-09
ref|XP_002510805.1| conserved hypothetical protein [Ricinus comm...    67   2e-09
gb|ESW24285.1| hypothetical protein PHAVU_004G1173001g, partial ...    66   6e-09
gb|ESW24287.1| hypothetical protein PHAVU_004G117400g [Phaseolus...    64   2e-08
gb|EOY23168.1| Single-stranded DNA endonuclease family protein [...    64   2e-08
ref|XP_004234386.1| PREDICTED: flap endonuclease GEN-like 2-like...    64   3e-08
ref|XP_006353314.1| PREDICTED: flap endonuclease GEN-like 2-like...    63   4e-08
gb|EXC15970.1| Flap endonuclease GEN-like 2 [Morus notabilis]          62   6e-08
ref|XP_006599606.1| PREDICTED: flap endonuclease GEN-like 2-like...    62   8e-08
ref|XP_006599605.1| PREDICTED: flap endonuclease GEN-like 2-like...    62   8e-08
ref|XP_006490374.1| PREDICTED: flap endonuclease GEN-like 2-like...    60   2e-07
ref|XP_006490373.1| PREDICTED: flap endonuclease GEN-like 2-like...    60   2e-07
ref|XP_006490372.1| PREDICTED: flap endonuclease GEN-like 2-like...    60   2e-07
ref|XP_006421900.1| hypothetical protein CICLE_v10004614mg [Citr...    60   2e-07

>ref|XP_002322464.2| single-strand DNA endonuclease family protein [Populus trichocarpa]
           gi|550322629|gb|EEF06591.2| single-strand DNA
           endonuclease family protein [Populus trichocarpa]
          Length = 541

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 39/81 (48%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = -2

Query: 309 ESSSSACYSTAYRSMGTDDIIDLTGPPPRVDTRVVSKCQEV--RRIDVVELSDTDNDVSP 136
           ES S+   ST+++     ++IDL  P P   TR VS+CQ V  +  +V++LS+++N++SP
Sbjct: 465 ESGSNTACSTSFQY----EVIDLCSPSPVARTRTVSRCQRVNDQHSEVIDLSESENEMSP 520

Query: 135 EHARKARELRSFIANIRDEIS 73
           EHARKAR LR FIA+IRD++S
Sbjct: 521 EHARKARALRMFIASIRDDMS 541


>ref|XP_004173761.1| PREDICTED: flap endonuclease GEN-like 2-like, partial [Cucumis
           sativus]
          Length = 294

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 33/59 (55%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
 Frame = -2

Query: 255 DIIDLTGPPPRVDTRVVSKCQEV--RRIDVVELSDTDNDVSPEHARKARELRSFIANIR 85
           ++IDL  P P + TR VSK Q+   ++IDV++LSDT+ D SPEH RKARELRSF+A+++
Sbjct: 234 EVIDLLSPSPAIQTRNVSKFQQKTSQKIDVIDLSDTEIDQSPEHERKARELRSFLASLK 292


>ref|XP_004140848.1| PREDICTED: flap endonuclease GEN-like 2-like [Cucumis sativus]
          Length = 563

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 33/59 (55%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
 Frame = -2

Query: 255 DIIDLTGPPPRVDTRVVSKCQEV--RRIDVVELSDTDNDVSPEHARKARELRSFIANIR 85
           ++IDL  P P + TR VSK Q+   ++IDV++LSDT+ D SPEH RKARELRSF+A+++
Sbjct: 503 EVIDLLSPSPAIQTRNVSKFQQKTSQKIDVIDLSDTEIDQSPEHERKARELRSFLASLK 561


>ref|XP_002510805.1| conserved hypothetical protein [Ricinus communis]
           gi|223549920|gb|EEF51407.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 586

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 34/59 (57%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
 Frame = -2

Query: 255 DIIDLTGPPPRVDTRVVSKCQEV--RRIDVVELSDTDNDVSPEHARKARELRSFIANIR 85
           DIIDL  P P    R+V +CQE   + IDV++LSD++ ++S EHARKARELRSF+A IR
Sbjct: 526 DIIDLLSPSPPPQFRMVPRCQEASDKCIDVIDLSDSETEMSAEHARKARELRSFLAGIR 584


>gb|ESW24285.1| hypothetical protein PHAVU_004G1173001g, partial [Phaseolus
           vulgaris]
          Length = 224

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 38/82 (46%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
 Frame = -2

Query: 315 NGESSSSACYSTAYRSMGTDDIIDLTGPPPRVDTRVVSKCQEV--RRIDVVELSDTDNDV 142
           N  SSS+   ST    +G ++IIDL  P P       SKC++   + I+V+ LSD++NDV
Sbjct: 146 NTYSSSNKVVST----IGKNEIIDLLSPSPPKKFNFSSKCEQSSDQNIEVINLSDSENDV 201

Query: 141 SPEHARKARELRSFIANIRDEI 76
           S EH +KA+ELR F+A+IR+EI
Sbjct: 202 SVEHKQKAKELRLFLASIRNEI 223


>gb|ESW24287.1| hypothetical protein PHAVU_004G117400g [Phaseolus vulgaris]
          Length = 574

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
 Frame = -2

Query: 270 SMGTDDIIDLTGPPPRVDTRVVSKCQEV--RRIDVVELSDTDNDVSPEHARKARELRSFI 97
           ++G ++IIDL  P P       SKC++   + I+V+ LSD++NDVS EH +KA+ELR F+
Sbjct: 507 TIGKNEIIDLLSPSPPKKFNFSSKCEQSSDQNIEVINLSDSENDVSVEHKQKAKELRLFL 566

Query: 96  ANIRDEI 76
           A+IR+EI
Sbjct: 567 ASIRNEI 573


>gb|EOY23168.1| Single-stranded DNA endonuclease family protein [Theobroma cacao]
          Length = 589

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/60 (48%), Positives = 47/60 (78%)
 Frame = -2

Query: 255 DIIDLTGPPPRVDTRVVSKCQEVRRIDVVELSDTDNDVSPEHARKARELRSFIANIRDEI 76
           ++IDL+ P P+V ++ V +C +V    V++LSD++++ SPEH +KARELR F+A+IRD+I
Sbjct: 532 EVIDLSSPSPQVQSQNVPRCTDV---SVIDLSDSESERSPEHVKKARELRLFLASIRDDI 588


>ref|XP_004234386.1| PREDICTED: flap endonuclease GEN-like 2-like [Solanum lycopersicum]
          Length = 600

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 36/62 (58%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
 Frame = -2

Query: 258 DDIIDLTGPPPRVDTRVVSKCQE--VRRIDVVELSDTDNDV-SPEHARKARELRSFIANI 88
           D++IDLT PPP       SK  E  V+ ID+VELSD+DND+ SPEH R+ARELR FIA I
Sbjct: 537 DEVIDLTSPPPLQHASGNSKHLEGNVQCIDLVELSDSDNDMFSPEHTRRARELRMFIARI 596

Query: 87  RD 82
           ++
Sbjct: 597 KN 598


>ref|XP_006353314.1| PREDICTED: flap endonuclease GEN-like 2-like [Solanum tuberosum]
          Length = 600

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
 Frame = -2

Query: 258 DDIIDLTGPPPRVDTRVVSKCQE--VRRIDVVELSDTDNDVS-PEHARKARELRSFIANI 88
           D++IDLT PPP       SK  E  V+ ID++ELSD+DND+S PEH R+ARELR FIA I
Sbjct: 537 DEVIDLTSPPPLQHASRNSKHLEDNVQCIDLIELSDSDNDMSSPEHTRRARELRMFIAGI 596

Query: 87  RD 82
           ++
Sbjct: 597 KN 598


>gb|EXC15970.1| Flap endonuclease GEN-like 2 [Morus notabilis]
          Length = 566

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
 Frame = -2

Query: 321 SRNGESSSSACYSTAYRSMGTDDIIDLTGP-PPRVDTRVVSKCQEVRR----IDVVELSD 157
           S N E S+   Y         ++IIDL  P PPR+   + S  Q+V+     ++V+ELSD
Sbjct: 490 SSNEEGSTGVKYE--------NEIIDLLSPSPPRLRLTLSSNKQQVKPSPKVVNVIELSD 541

Query: 156 TDNDVSPEHARKARELRSFIANIRD 82
           ++ D+SPEH RKARELR F+A++RD
Sbjct: 542 SETDMSPEHQRKARELRLFLASVRD 566


>ref|XP_006599606.1| PREDICTED: flap endonuclease GEN-like 2-like isoform X2 [Glycine
           max]
          Length = 570

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
 Frame = -2

Query: 285 STAYRSMGTDDIIDLTGPPPRVDTRVVSKCQEV--RRIDVVELSDTDNDVSPEHARKARE 112
           S    S+  ++IIDL  P P   + + SKCQ+   + I+V+ LSD++ND+S E  +KA+E
Sbjct: 498 SEVVSSIDKNEIIDLLSPSPPKKSNLFSKCQQSSDQHIEVINLSDSENDMSVERKQKAKE 557

Query: 111 LRSFIANIRDEI 76
           LR F+A+IR+EI
Sbjct: 558 LRLFLASIRNEI 569


>ref|XP_006599605.1| PREDICTED: flap endonuclease GEN-like 2-like isoform X1 [Glycine
           max]
          Length = 571

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
 Frame = -2

Query: 285 STAYRSMGTDDIIDLTGPPPRVDTRVVSKCQEV--RRIDVVELSDTDNDVSPEHARKARE 112
           S    S+  ++IIDL  P P   + + SKCQ+   + I+V+ LSD++ND+S E  +KA+E
Sbjct: 499 SEVVSSIDKNEIIDLLSPSPPKKSNLFSKCQQSSDQHIEVINLSDSENDMSVERKQKAKE 558

Query: 111 LRSFIANIRDEI 76
           LR F+A+IR+EI
Sbjct: 559 LRLFLASIRNEI 570


>ref|XP_006490374.1| PREDICTED: flap endonuclease GEN-like 2-like isoform X3 [Citrus
           sinensis]
          Length = 477

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
 Frame = -2

Query: 315 NGESSSSA---CYSTAYRSMGTDDIIDLTGPPPRVDTRVVSKCQEV--RRIDVVELSDTD 151
           + ES S+A   CY T   +    +IIDL  P P V  R VS+ +E+  + I+ +ELSD++
Sbjct: 394 DAESKSNANMSCYPTG-STAAKAEIIDLVSPSP-VQCRNVSRIREMSDQPINTIELSDSE 451

Query: 150 NDVSPEHARKARELRSFIANIRDEIS 73
            + SPE  RKAR LR FIA+IRD+IS
Sbjct: 452 TEKSPELERKARALRMFIASIRDDIS 477


>ref|XP_006490373.1| PREDICTED: flap endonuclease GEN-like 2-like isoform X2 [Citrus
           sinensis]
          Length = 523

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
 Frame = -2

Query: 315 NGESSSSA---CYSTAYRSMGTDDIIDLTGPPPRVDTRVVSKCQEV--RRIDVVELSDTD 151
           + ES S+A   CY T   +    +IIDL  P P V  R VS+ +E+  + I+ +ELSD++
Sbjct: 440 DAESKSNANMSCYPTG-STAAKAEIIDLVSPSP-VQCRNVSRIREMSDQPINTIELSDSE 497

Query: 150 NDVSPEHARKARELRSFIANIRDEIS 73
            + SPE  RKAR LR FIA+IRD+IS
Sbjct: 498 TEKSPELERKARALRMFIASIRDDIS 523


>ref|XP_006490372.1| PREDICTED: flap endonuclease GEN-like 2-like isoform X1 [Citrus
           sinensis]
          Length = 583

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
 Frame = -2

Query: 315 NGESSSSA---CYSTAYRSMGTDDIIDLTGPPPRVDTRVVSKCQEV--RRIDVVELSDTD 151
           + ES S+A   CY T   +    +IIDL  P P V  R VS+ +E+  + I+ +ELSD++
Sbjct: 500 DAESKSNANMSCYPTG-STAAKAEIIDLVSPSP-VQCRNVSRIREMSDQPINTIELSDSE 557

Query: 150 NDVSPEHARKARELRSFIANIRDEIS 73
            + SPE  RKAR LR FIA+IRD+IS
Sbjct: 558 TEKSPELERKARALRMFIASIRDDIS 583


>ref|XP_006421900.1| hypothetical protein CICLE_v10004614mg [Citrus clementina]
           gi|557523773|gb|ESR35140.1| hypothetical protein
           CICLE_v10004614mg [Citrus clementina]
          Length = 583

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
 Frame = -2

Query: 315 NGESSSSA---CYSTAYRSMGTDDIIDLTGPPPRVDTRVVSKCQEV--RRIDVVELSDTD 151
           + ES S+A   CY T   +    +IIDL  P P V  R VS+ +E+  + I+ +ELSD++
Sbjct: 500 DAESKSNANMSCYPTG-STAAKAEIIDLVSPSP-VQCRNVSRIREMSDQPINTIELSDSE 557

Query: 150 NDVSPEHARKARELRSFIANIRDEIS 73
            + SPE  RKAR LR FIA+IRD+IS
Sbjct: 558 TEKSPELERKARALRMFIASIRDDIS 583


Top