BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00022492
         (1040 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [...   115   4e-23
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...   110   1e-21
ref|XP_002446679.1| hypothetical protein SORBIDRAFT_06g020406 [S...   109   2e-21
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626...   108   3e-21
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A...   108   3e-21
ref|XP_006405618.1| hypothetical protein EUTSA_v10028075mg [Eutr...   102   2e-19
ref|XP_006279399.1| hypothetical protein CARUB_v10007977mg [Caps...   102   3e-19
ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein A...   102   3e-19
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...   101   4e-19
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   101   6e-19
gb|EPS57564.1| hypothetical protein M569_17254 [Genlisea aurea]       100   9e-19
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...   100   9e-19
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...   100   1e-18
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A...   100   1e-18
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A...   100   1e-18
ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617...   100   2e-18
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621...   100   2e-18
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...   100   2e-18
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta...   100   2e-18
ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623...    99   2e-18

>gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
          Length = 1060

 Score =  115 bits (287), Expect = 4e-23
 Identities = 74/203 (36%), Positives = 101/203 (49%), Gaps = 2/203 (0%)
 Frame = -2

Query: 1039 IPIDPNGGKDRLFWHFEKHGRFTVKSAYKALISTKKLKMDKPESSAGSKKLRADWKRCWA 860
            IP+    G D L WH+E++G ++VKS Y+ L   +K KM   E SA        WK+ WA
Sbjct: 693  IPLASLAGHDCLIWHYERNGMYSVKSGYR-LAGLEKDKMSG-EPSARVDLNSKFWKKIWA 750

Query: 859  LKIKGKLKHFLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRALTVW 680
            LKI  K+K FLWRC  + LP    L  R I  T IC  C  K E++ H ++ C  A  VW
Sbjct: 751  LKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKEVW 810

Query: 679  KLAPVSWNNISE--EFFSVKRWWHDICNLDKSSVSLDRIQLSVYILWWLWKTRNICIFEK 506
            + +  +W N+ E     S +  WH +    + S S +   L  Y+ W LW  RN  IFE 
Sbjct: 811  RNS--AWGNVCEVWRVNSFRELWHAL----QLSSSGEEQGLFAYLCWGLWNRRNSFIFEG 864

Query: 505  IIWTEKEIVDRAVCEWLEFKHAN 437
               T  +++ R      EF  AN
Sbjct: 865  KSETAIQLLSRMTKLAQEFSDAN 887


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score =  110 bits (274), Expect = 1e-21
 Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 5/207 (2%)
 Frame = -2

Query: 1012 DRLFWHFEKHGRFTVKSAYKALISTKKLKMDKPESSAGSKKLRADWKRCWALKIKGKLKH 833
            D   W F K G +TVKS Y A     +   D P        L+A   + W +K   K KH
Sbjct: 881  DDFSWSFTKSGNYTVKSGYWAARDLSRPTCDLPFQGPSVSALQA---QVWKIKTTRKFKH 937

Query: 832  FLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRALTVWKLAPVSWNN 653
            F W+CL   L T  +L  R+I    +C  CG +EE++ HLLF C  +  +W L+P+    
Sbjct: 938  FEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQIWALSPIP--- 994

Query: 652  ISEEFFSVKRWWHDICNL----DKSSVSLDRIQLSVYILWWLWKTRNICIFEKIIWTEKE 485
             SE  F     +++   L     +  ++ D +++  +ILW++WK+RN  IFE +I + + 
Sbjct: 995  SSEYIFPRNSLFYNFDFLLSRGKEFDIAEDIMEIFPWILWYIWKSRNRFIFENVIESPQV 1054

Query: 484  IVDRAVCEWLEFKHAN-EGVTKRVPQP 407
            I+D A+ E   +K AN + V    P P
Sbjct: 1055 ILDFAIQEANVWKQANSKEVATEYPPP 1081


>ref|XP_002446679.1| hypothetical protein SORBIDRAFT_06g020406 [Sorghum bicolor]
            gi|241937862|gb|EES11007.1| hypothetical protein
            SORBIDRAFT_06g020406 [Sorghum bicolor]
          Length = 395

 Score =  109 bits (273), Expect = 2e-21
 Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 14/221 (6%)
 Frame = -2

Query: 1039 IPIDPNGGKDRLFWHFEKHGRFTVKSAYKALISTKKLKMDKPESSAGSKKL---RADWKR 869
            +P+     KD   WH EK+G FTV+SAY+ LI  KK + D  E  A        + +WK+
Sbjct: 19   MPLSMRKQKDCWAWHHEKNGLFTVRSAYRMLIELKKSREDYFEGRANCSDFATSQKEWKK 78

Query: 868  CWALKIKGKLKHFLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRAL 689
             W++K+  K+K F WR   NS+PTA  L+ RN+  T  C++CG  ++T  H L  C  + 
Sbjct: 79   LWSMKLPSKIKVFCWRLALNSIPTASVLKSRNLASTSHCKICGAVDDTWEHSLLFCTMSK 138

Query: 688  TVWKLAPVSWNN-ISEEFFSVKRWWHDI--CNLDKSSVSLDRIQLSVYILWWLWKTRNIC 518
             VW L      N IS    S  + W     CN+ ++    D I++ V   W +W+ R   
Sbjct: 139  CVWALLDEDITNLISHLRISNPKHWITFMCCNIPQA----DGIRVLV-TCWAIWQARRKA 193

Query: 517  IFEKI--------IWTEKEIVDRAVCEWLEFKHANEGVTKR 419
            I E +        +   ++I +  +   +E K  N+  +K+
Sbjct: 194  IHEGVFQSPFSIMVTINRQIEELQMIRGMELKGGNQNQSKQ 234


>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
          Length = 1452

 Score =  108 bits (270), Expect = 3e-21
 Identities = 61/173 (35%), Positives = 93/173 (53%), Gaps = 4/173 (2%)
 Frame = -2

Query: 1015 KDRLFWHFEKHGRFTVKSAYKALISTKKLKMDKPESSAGSKKLRADWKRCWALKIKGKLK 836
            +D + WHF+K G ++VKS Y+  ++      ++PESS  S +L   WK  W L +  K+K
Sbjct: 1092 EDEVLWHFDKKGEYSVKSGYQLALNQNF--PNEPESSNSSSRL---WKIPWMLDLPEKVK 1146

Query: 835  HFLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRALTVWKLAPV--- 665
             F+WR L N LPTA+ L +R      ICQ C L+ ET++H+L +C  A  +W LAP+   
Sbjct: 1147 IFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQ 1206

Query: 664  -SWNNISEEFFSVKRWWHDICNLDKSSVSLDRIQLSVYILWWLWKTRNICIFE 509
             S ++  + F +++  W        S  S    +L +   W +W  RN  IFE
Sbjct: 1207 PSKDHNQDFFSAIQEMW--------SRSSTAEAELMIVYCWVIWSARNKFIFE 1251


>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 765

 Score =  108 bits (270), Expect = 3e-21
 Identities = 61/173 (35%), Positives = 93/173 (53%), Gaps = 4/173 (2%)
 Frame = -2

Query: 1015 KDRLFWHFEKHGRFTVKSAYKALISTKKLKMDKPESSAGSKKLRADWKRCWALKIKGKLK 836
            +D + WHF+K G ++VKS Y+  ++      ++PESS  S +L   WK  W L +  K+K
Sbjct: 405  EDEVLWHFDKKGEYSVKSGYQLALNQNF--PNEPESSNSSSRL---WKIPWMLDLPEKVK 459

Query: 835  HFLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRALTVWKLAPV--- 665
             F+WR L N LPTA+ L +R      ICQ C L+ ET++H+L +C  A  +W LAP+   
Sbjct: 460  IFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQ 519

Query: 664  -SWNNISEEFFSVKRWWHDICNLDKSSVSLDRIQLSVYILWWLWKTRNICIFE 509
             S ++  + F +++  W        S  S    +L +   W +W  RN  IFE
Sbjct: 520  PSKDHNQDFFSAIQEMW--------SRSSTAEAELMIVYCWVIWSARNKFIFE 564


>ref|XP_006405618.1| hypothetical protein EUTSA_v10028075mg [Eutrema salsugineum]
            gi|557106756|gb|ESQ47071.1| hypothetical protein
            EUTSA_v10028075mg [Eutrema salsugineum]
          Length = 343

 Score =  102 bits (254), Expect = 2e-19
 Identities = 66/248 (26%), Positives = 111/248 (44%), Gaps = 1/248 (0%)
 Frame = -2

Query: 1039 IPIDPNGGKDRLFWHFEKHGRFTVKSAYKALISTKKLKMDKPESSAGSKKLRADW-KRCW 863
            +P+  +   DRL W  +K+G+++V+S Y   +S           +   ++   +W K  W
Sbjct: 16   LPLSSSRPSDRLVWLPQKNGKYSVRSGYGLSVS----------ETIPERQRNFNWQKNIW 65

Query: 862  ALKIKGKLKHFLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRALTV 683
             L+   K+K FLWR +  + P   +L RR I     C++CG   ET+TH+L  C  A  V
Sbjct: 66   KLQTVPKVKQFLWRAVVEAFPVGVELVRRGIQVDFACKICG-NPETITHVLRDCQLARKV 124

Query: 682  WKLAPVSWNNISEEFFSVKRWWHDICNLDKSSVSLDRIQLSVYILWWLWKTRNICIFEKI 503
            W LAP+   +       +    H +  +    + +    L  +I W LW  RN  IF   
Sbjct: 125  WNLAPLRTQSHLNTVLCLDFLAHILSMVSLPPIEVSTTSLPAWICWNLWTPRNHRIFSDT 184

Query: 502  IWTEKEIVDRAVCEWLEFKHANEGVTKRVPQPAQFCSSSSALGGNLTTLGPIFYVVSGVF 323
             ++  EI+ +A+C+   ++ A   + K  PQ  Q  +S       +  +   ++  SG  
Sbjct: 185  TYSAYEIITKAICDARAWQEAQSSLRK--PQSPQVVTSPPPTLSVICNVDAAWHADSG-- 240

Query: 322  QSGTSFVF 299
              G  F F
Sbjct: 241  HCGLGFTF 248


>ref|XP_006279399.1| hypothetical protein CARUB_v10007977mg [Capsella rubella]
            gi|482548097|gb|EOA12297.1| hypothetical protein
            CARUB_v10007977mg [Capsella rubella]
          Length = 417

 Score =  102 bits (253), Expect = 3e-19
 Identities = 77/287 (26%), Positives = 137/287 (47%), Gaps = 11/287 (3%)
 Frame = -2

Query: 1012 DRLFWHFEKHGRFTVKSAYKALISTKKLKMDKPESSAGSKKLRADWKRCWALKIKGKLKH 833
            D+L W + + G ++VKS    L++ +   +D  E S  +K++ A  ++ WA     K+K 
Sbjct: 46   DKLVWAYTRDGNYSVKSG-NWLLTQEHEVVDSVEES--TKRINAVKEKVWAFHTAPKIKM 102

Query: 832  FLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRALTVWKLA--PVSW 659
            F WR L  ++  ++ LRR  I    +CQVC ++EET++H+LF C  A  VW ++  P+  
Sbjct: 103  FFWRVLSGAIAVSECLRRHGINTNPLCQVCKVEEETISHVLFGCQLAQQVWSVSGLPIPA 162

Query: 658  NNISEEFFSVKRWWHDICNLDKSSVSLDRIQLSVYILWWLWKTRNICIFEKIIWTEKEIV 479
            N  S    +V+   +    + KS VSL   Q   ++LW +WK RN  +F + +     + 
Sbjct: 163  NGFSSS--TVENVEYCFMIMGKSEVSLQSRQAIPWLLWEIWKARNGLVFAQRVSDPHILW 220

Query: 478  DRAVCEWLEFKHANEGVT--------KRVPQPAQFCSSSSALGGNLTTLGPIFYVVSGVF 323
              A  E LE+    E +         + V    ++C           T+G +   V   +
Sbjct: 221  VLAKDEMLEWCQHQERIVSTDDTDGRRVVGLDTRWCK---------PTVGKLKCNVHSSW 271

Query: 322  QSGTSFVFGGWIKDEH-GNLIYAWKGSRNDFAHSVEALLAGIRQTMC 185
             +  SF  G WI   H G+++Y  + +     + + + L+ I+ ++C
Sbjct: 272  INDYSFCGGAWIVRNHLGDVLYHARDAFLPRVNRIASELSCIQWSLC 318


>ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 968

 Score =  102 bits (253), Expect = 3e-19
 Identities = 67/202 (33%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
 Frame = -2

Query: 1039 IPIDPNGGKDRLFWHFEKHGRFTVKSAYKALISTKKLKMDKPESSAGSKKLRAD----WK 872
            +P+    G D   WHF   GRF+VKS Y   +  K+L+     SS+GS  + ++    W 
Sbjct: 586  VPLCDGNGGDVAVWHFSDDGRFSVKSGYWFGMEMKRLEKG---SSSGSGHVNSNSINIWS 642

Query: 871  RCWALKIKGKLKHFLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRA 692
              W L +  K+K FLWR  H  LP  ++L +RNI     C  CG  EET+ H L  C  A
Sbjct: 643  LIWDLLVPNKVKLFLWRACHAFLPCVERLFKRNICSHSGCGRCGEGEETVVHSLCWCRVA 702

Query: 691  LTVWKLAPVSWNNISEEFFSVKRW----WHDICNLDKSSVSLDRIQLSVYILWWLWKTRN 524
              VWK     W  +       K W    + D+  L     ++   +L   I WWLWK RN
Sbjct: 703  KKVWKC--TYWRGV------YKSWQISSFADLFGLVAMEGNIKNTELFALICWWLWKDRN 754

Query: 523  ICIFEKIIWTEKEIVDRAVCEW 458
                 K     ++IV++ + EW
Sbjct: 755  EVFHGKKGLEPRQIVEKCL-EW 775


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score =  101 bits (252), Expect = 4e-19
 Identities = 84/346 (24%), Positives = 151/346 (43%), Gaps = 9/346 (2%)
 Frame = -2

Query: 1015 KDRLFWHFEKHGRFTVKSAYKALISTKKLKMDKPESSAGSKKLRADWKRCWALKIKGKLK 836
            +D   W + ++ ++TV+S Y         + +      G   L+ +    W LKI  K+K
Sbjct: 1342 RDSYKWAYTRNTQYTVRSGYWVATHVNLTEEEIINPLEGDVPLKQE---IWRLKITPKIK 1398

Query: 835  HFLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRALTVWKLAPVSWN 656
            HF+WRCL  +L T  QLR RNIP    CQ C   +ET+ H++F C+ A  VW+ A  S +
Sbjct: 1399 HFIWRCLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYAQVVWRSANFSGS 1458

Query: 655  NISEEFFSVKRWWHDICNLDKS-SVSLDRIQLSVYILWWLWKTRNICIFEKI---IWTEK 488
            N      +++     I    K+ ++ +    +  +I+W LWK+RN  +F+++    W   
Sbjct: 1459 NRLCFTDNLEENIRLILQGKKNQNLPILNGLMPFWIMWRLWKSRNEYLFQQLDRFPWKVA 1518

Query: 487  EIVDRAVCEWLEFKHANEGVTKRVPQPAQFCSSSSALGGNLTTLGPIFYVVSGVFQS--- 317
            +  ++   EW+E    +  ++    Q     S+   L  +     P    +   F S   
Sbjct: 1519 QKAEQEATEWVETMVNDTAISHNTAQ-----SNDRPLSRSKQWSSPPEGFLKCNFDSGYV 1573

Query: 316  -GTSFVFGGWI-KDEHGNLIYAWKGSRNDFAHSVEALLAGIRQTMCFVHFXXXXXXXXXX 143
             G  +   GWI +D +G ++++          +++A   G    +  V            
Sbjct: 1574 QGRDYTSTGWILRDCNGRVLHSGCAKLQQSYSALQAEALGFLHALQMVWIRGYCYVWFEG 1633

Query: 142  XXXXIVNLLNAKGSFALGEKLIADDIFLLWYLFYSCSFAFMDSKRD 5
                + NL+N      L E L+ D  F +  L +S S  +++ +R+
Sbjct: 1634 DNLELTNLINKTEDHHLLETLLYDIRFWMTKLPFS-SIGYVNRERN 1678


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  101 bits (251), Expect = 6e-19
 Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 2/263 (0%)
 Frame = -2

Query: 1039 IPIDPNGGKDRLFWHFEKHGRFTVKSAY-KALISTKKLKMDKPESSAGSK-KLRADWKRC 866
            IP+      D+  W   K+G+FTV+SAY   L+  +K     P +S G   KL   W++ 
Sbjct: 1001 IPVALQKKPDQWMWMMSKNGQFTVRSAYYHELLEDRKTG---PSTSRGPNLKL---WQKI 1054

Query: 865  WALKIKGKLKHFLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRALT 686
            W  KI  K+K F W+ +HN L     +R+R +     C  CG KEET  HL++ C+ +  
Sbjct: 1055 WKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSR 1114

Query: 685  VWKLAPVSWNNISEEFFSVKRWWHDICNLDKSSVSLDRIQLSVYILWWLWKTRNICIFEK 506
             W ++P+  +  + E  S + W   + +  K +   +   L   I W +W  RN  +FEK
Sbjct: 1115 AWYISPLRIHTGNIEAGSFRIWVESLLDTHKDT---EWWALFWMICWNIWLGRNKWVFEK 1171

Query: 505  IIWTEKEIVDRAVCEWLEFKHANEGVTKRVPQPAQFCSSSSALGGNLTTLGPIFYVVSGV 326
                 +E+V+RAV   +EF+      +     P +  ++    G ++  +G +   V   
Sbjct: 1172 KKLAFQEVVERAVRGVMEFEEECAHTS-----PVETLNTHEN-GWSVPPVGMVKLNVDAA 1225

Query: 325  FQSGTSFVFGGWIKDEHGNLIYA 257
                     GG ++D  G+++ A
Sbjct: 1226 VFKHVGIGMGGVVRDAEGDVLLA 1248


>gb|EPS57564.1| hypothetical protein M569_17254 [Genlisea aurea]
          Length = 407

 Score =  100 bits (249), Expect = 9e-19
 Identities = 52/171 (30%), Positives = 77/171 (45%)
 Frame = -2

Query: 1039 IPIDPNGGKDRLFWHFEKHGRFTVKSAYKALISTKKLKMDKPESSAGSKKLRADWKRCWA 860
            IP+  N   DRL WHF  HG +T+K+ Y  L    ++    P ++   + L   W+  W 
Sbjct: 37   IPLAKNAYPDRLIWHFSNHGNYTIKTGYNMLKGRAEMSRPSPSNTNNGRSLF--WQSLWK 94

Query: 859  LKIKGKLKHFLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRALTVW 680
            LK+  ++  F WR   N LP  D L RR I     C++CG   ET  H    C  +  VW
Sbjct: 95   LKLPTRILTFGWRFGKNILPLKDNLTRRKICLDATCEICGGGRETWFHAFISCPFSQAVW 154

Query: 679  KLAPVSWNNISEEFFSVKRWWHDICNLDKSSVSLDRIQLSVYILWWLWKTR 527
            ++   SWN   +E      W      L+   + ++     +  LW LW+ R
Sbjct: 155  RMGGTSWNITDQEPCHPLDW----LMLNHQQLRMEHFSGLMVTLWCLWRHR 201


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
            thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
            reverse transcriptase [Arabidopsis thaliana]
          Length = 1333

 Score =  100 bits (249), Expect = 9e-19
 Identities = 72/276 (26%), Positives = 128/276 (46%), Gaps = 8/276 (2%)
 Frame = -2

Query: 1000 WHFEKHGRFTVKSAYKALISTKK---LKMDKPESSAGSKKLRADWKRCWALKIKGKLKHF 830
            W   K G ++VKS Y     T K   ++  + + S    K     ++ W+     K+K F
Sbjct: 1006 WLHSKSGEYSVKSGYWLAFQTNKPELIREARVQPSTNGLK-----EKIWSTLTSPKIKLF 1060

Query: 829  LWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRALTVWKLAPVSWNNI 650
            LWR L ++LP A Q+ RR +P    CQVCG + E++ H+LF C+ A  VW L+ V  +  
Sbjct: 1061 LWRILSSALPVAYQIIRRGMPIDPRCQVCGEEGESINHVLFTCSLARQVWALSGVPTSQF 1120

Query: 649  SEEFFSVKRWWHDICNLDKSSVSLDRIQLS-VYILWWLWKTRNICIFEKIIWTEKEIVDR 473
              +  S+      +  L    +  ++I+ S  ++LW LWK R+   FE  I++  + +++
Sbjct: 1121 GFQNSSIFANIQYLLELKGKGLIPEQIKKSWPWVLWRLWKNRDKLFFEGTIFSPLKSIEK 1180

Query: 472  A---VCEWLEFKHANEGVTKRVPQPAQFCSSSSALGGNLTTLGPIFYVVSGVFQSGTSFV 302
                V EW       + +   V      CS+          LG +   +SGV+       
Sbjct: 1181 IRDDVQEWF----LAQALVASVDAGETVCSAPCPSSWEPPPLGWVKCNISGVWSGKKRVC 1236

Query: 301  FGGWI-KDEHGNLIYAWKGSRNDFAHSVEALLAGIR 197
             G W+ +D+HG ++   + + ++ +   +AL   ++
Sbjct: 1237 GGAWVLRDDHGKVLLHSRRAFSNLSVKKDALFCCVK 1272


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X2
            [Citrus sinensis]
          Length = 765

 Score =  100 bits (248), Expect = 1e-18
 Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 5/182 (2%)
 Frame = -2

Query: 1039 IPIDPNGGKDRLFWHFEKHGRFTVKSAYKALISTKKLKMDKPESSAGSKKLRADWKRCWA 860
            IP+      D++ WH++K G ++VKS Y+       L+M  P   + SK+    W   W 
Sbjct: 401  IPLPRQLSPDQVLWHYDKKGNYSVKSGYQLA-----LQMKFPNRPSSSKEDNNSWNSIWY 455

Query: 859  LKIKGKLKHFLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRALTVW 680
            L+I  K+K F+WR  ++ LPT++ L +R I  T  CQ C    ET+ H LF C  +  +W
Sbjct: 456  LQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIW 515

Query: 679  KLAPVSWNNISEEFFSVKRWWHDICNL-----DKSSVSLDRIQLSVYILWWLWKTRNICI 515
            KL         EE  ++K    D+ +L     D+ S +   ++L V + W +W +RN+ I
Sbjct: 516  KL-----TTFEEEVKALK--CKDVLSLLLALADRRSKT--EMELIVAVCWSIWHSRNLFI 566

Query: 514  FE 509
            F+
Sbjct: 567  FQ 568


>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
            [Citrus sinensis]
          Length = 968

 Score =  100 bits (248), Expect = 1e-18
 Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 5/182 (2%)
 Frame = -2

Query: 1039 IPIDPNGGKDRLFWHFEKHGRFTVKSAYKALISTKKLKMDKPESSAGSKKLRADWKRCWA 860
            IP+      D++ WH++K G ++VKS Y+       L+M  P   + SK+    W   W 
Sbjct: 604  IPLPRQLSPDQVLWHYDKKGNYSVKSGYQLA-----LQMKFPNRPSSSKEDNNSWNSIWY 658

Query: 859  LKIKGKLKHFLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRALTVW 680
            L+I  K+K F+WR  ++ LPT++ L +R I  T  CQ C    ET+ H LF C  +  +W
Sbjct: 659  LQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIW 718

Query: 679  KLAPVSWNNISEEFFSVKRWWHDICNL-----DKSSVSLDRIQLSVYILWWLWKTRNICI 515
            KL         EE  ++K    D+ +L     D+ S +   ++L V + W +W +RN+ I
Sbjct: 719  KL-----TTFEEEVKALK--CKDVLSLLLALADRRSKT--EMELIVAVCWSIWHSRNLFI 769

Query: 514  FE 509
            F+
Sbjct: 770  FQ 771


>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 769

 Score =  100 bits (248), Expect = 1e-18
 Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 5/182 (2%)
 Frame = -2

Query: 1039 IPIDPNGGKDRLFWHFEKHGRFTVKSAYKALISTKKLKMDKPESSAGSKKLRADWKRCWA 860
            IP+      D++ WH++K G ++VKS Y+       L+M  P   + SK+    W   W 
Sbjct: 401  IPLPRQLSPDQVLWHYDKKGNYSVKSGYQLA-----LQMKFPNRPSSSKEDNNSWNSIWY 455

Query: 859  LKIKGKLKHFLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRALTVW 680
            L+I  K+K F+WR  ++ LPT++ L +R I  T  CQ C    ET+ H LF C  +  +W
Sbjct: 456  LQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIW 515

Query: 679  KLAPVSWNNISEEFFSVKRWWHDICNL-----DKSSVSLDRIQLSVYILWWLWKTRNICI 515
            KL         EE  ++K    D+ +L     D+ S +   ++L V + W +W +RN+ I
Sbjct: 516  KL-----TTFEEEVKALK--CKDVLSLLLALADRRSKT--EMELIVAVCWSIWHSRNLFI 566

Query: 514  FE 509
            F+
Sbjct: 567  FQ 568


>ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis]
          Length = 1238

 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 8/205 (3%)
 Frame = -2

Query: 1012 DRLFWHFEKHGRFTVKSAYKALISTKKLKMDKPESSAGSKKLRADWKRCWALKIKGKLKH 833
            D+  WH++K+G+++VKS Y+       LK+  P S   S    + W   WA ++  K+K 
Sbjct: 879  DQYLWHYDKYGQYSVKSGYQIA-----LKLKCPNSPCSSDSSLSQWNVIWAAELPEKIKI 933

Query: 832  FLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRALTVWKLAPVSWNN 653
            F+WR + N LPTA  L RR I  + IC+ CG+K E + H L  C  A  VW+ A      
Sbjct: 934  FMWRAVKNLLPTASNLWRRKIVGSPICRRCGVKNEDVIHALLDCKVAKKVWRNA-----G 988

Query: 652  ISEEFFSVKRWWHDICNLDKSSVSLD--------RIQLSVYILWWLWKTRNICIFEKIIW 497
             +EE          +   D  +V ++         ++L V + W +W ++N+ IFE    
Sbjct: 989  CAEEI-------EKLVQQDLMAVLVEIQRKKGKKELELIVVLCWTIWYSQNLFIFENKRE 1041

Query: 496  TEKEIVDRAVCEWLEFKHANEGVTK 422
              +  + RA      FK   +  +K
Sbjct: 1042 DSQLSIARAEANMDSFKRIKKPFSK 1066


>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
          Length = 2303

 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 55/177 (31%), Positives = 90/177 (50%)
 Frame = -2

Query: 1039 IPIDPNGGKDRLFWHFEKHGRFTVKSAYKALISTKKLKMDKPESSAGSKKLRADWKRCWA 860
            IP+  +   D + WH++KHG ++VKS Y+  +   KLK     S++GS   R  WK  W+
Sbjct: 967  IPLPRSQKVDEMMWHYDKHGEYSVKSGYQIAL---KLKAPDEPSNSGSNSKR--WKAVWS 1021

Query: 859  LKIKGKLKHFLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRALTVW 680
            +++  K+K F+WR   N LPTA+ L +R      ICQ C  + ET+ H L  C  A  +W
Sbjct: 1022 MELPEKMKIFMWRAARNLLPTAENLWKRKCLKDPICQGCNREVETVRHALLDCKAARKIW 1081

Query: 679  KLAPVSWNNISEEFFSVKRWWHDICNLDKSSVSLDRIQLSVYILWWLWKTRNICIFE 509
              A  S    + +   +  + +++     S+    + + ++   W +W  RN  IFE
Sbjct: 1082 YHATSSVQISNAQNQDILEFIYEVW----STWGKTKAEQTIAFCWAIWFARNKRIFE 1134


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 79/290 (27%), Positives = 121/290 (41%), Gaps = 16/290 (5%)
 Frame = -2

Query: 1012 DRLFWHFEKHGRFTVKSAYKALISTKKLKMDKPESSAGSKKLRADWKRCWALKIKGKLKH 833
            D++ W++   G +TV+S Y  L       +       GS  L+    R W L I  KLKH
Sbjct: 1157 DKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKT---RIWNLPIMPKLKH 1213

Query: 832  FLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRALTVWKLAPVSW-- 659
            FLWR L  +L T ++L  R +    IC  C  + E++ H LF C  A   W L+  S   
Sbjct: 1214 FLWRALSQALATTERLTTRGMRIDPICPRCHRENESINHALFTCPFATMAWWLSDSSLIR 1273

Query: 658  -----NNISEEFFSVKRWWHDICNLDKSSVSLDRIQLSVYILWWLWKTRNICIFEKIIWT 494
                 N+  E   ++  +  D    D   +      L V+++W +WK RN  +F K   +
Sbjct: 1274 NQLMSNDFEENISNILNFVQDTTMSDFHKL------LPVWLIWRIWKARNNVVFNKFRES 1327

Query: 493  EKEIVDRAVCEWLEFKHANEGVTKRVPQPAQFCSSSSALGGNLTTLGPIFYVVSGVFQSG 314
              + V  A  E  ++ +A +   K+ P P +  + +     N     P  YV    F +G
Sbjct: 1328 PSKTVLSAKAETHDWLNATQS-HKKTPSPTRQIAENKIEWRN----PPATYVKCN-FDAG 1381

Query: 313  TSF----VFGGWIKDEHGNLIYAWKGSR-----NDFAHSVEALLAGIRQT 191
                     GGWI   H     +W   +     N      +ALLA ++QT
Sbjct: 1382 FDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQT 1431


>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 773

 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 13/235 (5%)
 Frame = -2

Query: 1021 GGKDRLFWHFEKHGRFTVKSAYKALISTKKLKMDKPESSAGSKKLRAD--WKRCWALKIK 848
            G  D + W +   G ++VKS Y  L   +KL   +  S     ++ A   +   W     
Sbjct: 451  GANDAITWIYTHDGNYSVKSGYHLL---RKLSQQQHASLPSPNEVSAQTVFTNIWKQNAP 507

Query: 847  GKLKHFLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRALTVW---- 680
             K+KHF WR  HN+LPTA  L+RR +     CQ CG   E + HLLFQC  +  +W    
Sbjct: 508  PKIKHFWWRSAHNALPTAGNLKRRRLITDDTCQRCGEASEDVNHLLFQCRVSKEIWEQAH 567

Query: 679  -KLAP---VSWNNISEEFFSVKRWWHDICNLDKSSVSLDRIQLSVYILWWLWKTRNICIF 512
             KL P   +  N+ ++   S+++       L++S  +   + L  +I W +WK RN  IF
Sbjct: 568  IKLCPGDSLMSNSFNQNLESIQK-------LNQS--ARKDVSLFPFIGWRIWKMRNDLIF 618

Query: 511  EKIIWTEKEIVDRAVC---EWLEFKHANEGVTKRVPQPAQFCSSSSALGGNLTTL 356
                W+  + + +A+    +W E  + NE   +R PQ      ++   GG+L TL
Sbjct: 619  NNKRWSIPDSIQKALIDQQQWKESLNCNE-QQQRKPQ-LHDSHNNKCYGGHLKTL 671


>ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623801 [Citrus sinensis]
          Length = 441

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 59/182 (32%), Positives = 90/182 (49%), Gaps = 9/182 (4%)
 Frame = -2

Query: 1027 PNGGK-DRLFWHFEKHGRFTVKSAYKALISTKKLKMDKPESSAGSKKLRADWKRCWALKI 851
            PN  K D+  WH++K+G+++VKS Y+       LK+  P S   S    + W   WA ++
Sbjct: 76   PNTPKPDQYLWHYDKYGQYSVKSGYQIA-----LKLKCPNSPCSSDSSLSQWNVIWAAEL 130

Query: 850  KGKLKHFLWRCLHNSLPTADQLRRRNIPCTVICQVCGLKEETLTHLLFQCNRALTVWKLA 671
              K+K F+WR + N LPT   L RR I  + IC+ CG+K E + H L  C  A  VW+ A
Sbjct: 131  PEKIKIFMWRAVKNLLPTTSNLWRRKIVGSPICRRCGVKNEDVIHALLDCKVAKKVWRNA 190

Query: 670  PVSWNNISEEFFSVKRWWHDICNLDKSSVSLD--------RIQLSVYILWWLWKTRNICI 515
                   +EE          +   D  +V ++         ++L V + W +W +RN+ I
Sbjct: 191  -----GCAEEI-------EKLVQQDLMAVLVEIQRKKGKKELELIVVLCWTIWYSRNLFI 238

Query: 514  FE 509
            FE
Sbjct: 239  FE 240