BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00022288
         (958 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containi...   357   3e-96
ref|XP_004233766.1| PREDICTED: pentatricopeptide repeat-containi...   357   4e-96
ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi...   332   1e-88
gb|EMJ25188.1| hypothetical protein PRUPE_ppa014757mg [Prunus pe...   328   2e-87
ref|XP_006448595.1| hypothetical protein CICLE_v10014221mg [Citr...   327   4e-87
ref|XP_006468579.1| PREDICTED: pentatricopeptide repeat-containi...   325   1e-86
ref|XP_002532711.1| pentatricopeptide repeat-containing protein,...   311   2e-82
ref|XP_004295518.1| PREDICTED: pentatricopeptide repeat-containi...   310   5e-82
gb|EOX96826.1| Tetratricopeptide repeat (TPR)-like superfamily p...   308   3e-81
gb|EXB83263.1| hypothetical protein L484_011557 [Morus notabilis]     307   3e-81
ref|XP_002299387.2| pentatricopeptide repeat-containing family p...   306   6e-81
gb|ESW10852.1| hypothetical protein PHAVU_009G243400g [Phaseolus...   285   2e-74
ref|XP_004487896.1| PREDICTED: pentatricopeptide repeat-containi...   283   5e-74
ref|XP_006402877.1| hypothetical protein EUTSA_v10005782mg [Eutr...   279   1e-72
ref|XP_006597752.1| PREDICTED: pentatricopeptide repeat-containi...   278   2e-72
ref|XP_006290586.1| hypothetical protein CARUB_v10016675mg [Caps...   277   4e-72
ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arab...   276   8e-72
ref|NP_191302.2| protein ORGANELLE TRANSCRIPT PROCESSING 84 [Ara...   271   2e-70
gb|AAP40452.1| unknown protein [Arabidopsis thaliana]                 271   2e-70
ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago t...   264   4e-68

>ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Solanum tuberosum]
          Length = 889

 Score =  357 bits (917), Expect = 3e-96
 Identities = 173/252 (68%), Positives = 213/252 (84%)
 Frame = +2

Query: 203 EPTSSDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQD 382
           EPTS +  S  SWI++LRSQ R N F+EAI T+++M + GV PDNF FPAVLKAAT LQD
Sbjct: 50  EPTS-ETPSAASWIDALRSQVRLNCFKEAIFTYIQMTSEGVRPDNFVFPAVLKAATGLQD 108

Query: 383 LDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMI 562
           L+LGKQI+G+VVK GYD+ SVTV N+++HL GRCG  +D V+KVFDRI QRDQVSWNS+I
Sbjct: 109 LNLGKQIYGAVVKFGYDTTSVTVANSVIHLLGRCGGSIDDVYKVFDRITQRDQVSWNSLI 168

Query: 563 NALCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRV 742
           NALCK+E+W LALEAFR++GL+  E SSFTLVS+ALACSNL R DGLRLGKQVHG+SLR+
Sbjct: 169 NALCKFEKWELALEAFRLIGLDGFEASSFTLVSIALACSNLPRTDGLRLGKQVHGHSLRI 228

Query: 743 DDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFI 922
           DDR+T+TNN+LM+MYAKLG++DD++ VFE FA RD+VSWNT+IS+FSQ+D+F EAL+ F 
Sbjct: 229 DDRRTYTNNALMSMYAKLGRVDDSRAVFELFADRDIVSWNTIISSFSQNDQFREALDCFR 288

Query: 923 FMKDEGFKPDGV 958
            M  E  KPDGV
Sbjct: 289 VMIQEEIKPDGV 300



 Score =  114 bits (285), Expect = 5e-23
 Identities = 75/249 (30%), Positives = 128/249 (51%), Gaps = 6/249 (2%)
 Frame = +2

Query: 224 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLD---LG 394
           R + SW   + +  +   +  A+  F  +   G    +F   ++  A + L   D   LG
Sbjct: 159 RDQVSWNSLINALCKFEKWELALEAFRLIGLDGFEASSFTLVSIALACSNLPRTDGLRLG 218

Query: 395 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 574
           KQ+HG  +++  D       N L+ +Y + G  VD    VF+    RD VSWN++I++  
Sbjct: 219 KQVHGHSLRI--DDRRTYTNNALMSMYAKLGR-VDDSRAVFELFADRDIVSWNTIISSFS 275

Query: 575 KYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDD-- 748
           + +++  AL+ FR+M  E I+P   T+ SV  ACS+L   D   +GK++H Y L+ DD  
Sbjct: 276 QNDQFREALDCFRVMIQEEIKPDGVTISSVVPACSHLTLLD---VGKEIHCYVLKNDDLI 332

Query: 749 RKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFI-F 925
             +F ++SL+ MY    +++    VF+    R +  WN +++ ++Q+  F EAL  FI  
Sbjct: 333 GNSFVDSSLVDMYCNCQQVESGSRVFDSALKRSIGIWNAMLAGYTQNGFFTEALTLFIEM 392

Query: 926 MKDEGFKPD 952
           M+  G  P+
Sbjct: 393 MEFSGLSPN 401



 Score =  108 bits (270), Expect = 3e-21
 Identities = 80/261 (30%), Positives = 132/261 (50%), Gaps = 16/261 (6%)
 Frame = +2

Query: 224  RSKHSWIESLRSQARSNSFREAITTFVEM-QASGVLPDNFAFPAVLKAATALQDLDLGKQ 400
            RS   W   L    ++  F EA+T F+EM + SG+ P+     +V  A    +   L + 
Sbjct: 364  RSIGIWNAMLAGYTQNGFFTEALTLFIEMMEFSGLSPNPTTVASVFPACVHCEAFTLKEV 423

Query: 401  IHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINA--LC 574
            IHG V+KLG+      V N L+ LY R G  ++    +FD +  +D VSWN+MI    +C
Sbjct: 424  IHGYVIKLGFSDEKY-VQNALMDLYSRMGK-INISKYIFDNMESKDIVSWNTMITGFVVC 481

Query: 575  KYEEWVLALEAFRIMGLER-----------IEPSSFTLVSVALACSNLNRHDGLRLGKQV 721
             Y E  L +    +   +R           ++P+S TL++V   C++L     L  GK++
Sbjct: 482  GYHEDALIM-LHEMQTTKRHNDSENNVEFLLKPNSITLMTVLPGCASLV---ALAKGKEI 537

Query: 722  HGYSLR-VDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRF 898
            H Y++R          ++L+ MYAK G +D A+ VF+    +++++WN +I A+    + 
Sbjct: 538  HAYAIRNALAMDIAVGSALVDMYAKCGCLDIARRVFDSMTTKNVITWNVLIMAYGMHGKG 597

Query: 899  YEALEYF-IFMKDEGFKPDGV 958
             EALE F + + +   KP+ V
Sbjct: 598  EEALELFRMMVLERKVKPNNV 618



 Score =  100 bits (248), Expect = 1e-18
 Identities = 67/218 (30%), Positives = 117/218 (53%), Gaps = 3/218 (1%)
 Frame = +2

Query: 236 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
           SW   + S ++++ FREA+  F  M    + PD     +V+ A + L  LD+GK+IH  V
Sbjct: 266 SWNTIISSFSQNDQFREALDCFRVMIQEEIKPDGVTISSVVPACSHLTLLDVGKEIHCYV 325

Query: 416 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWVL 595
           +K      +  V ++L+ +Y  C   V+   +VFD   +R    WN+M+    +   +  
Sbjct: 326 LKNDDLIGNSFVDSSLVDMYCNC-QQVESGSRVFDSALKRSIGIWNAMLAGYTQNGFFTE 384

Query: 596 ALEAF-RIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRV--DDRKTFTN 766
           AL  F  +M    + P+  T+ SV  AC +    +   L + +HGY +++   D K +  
Sbjct: 385 ALTLFIEMMEFSGLSPNPTTVASVFPACVHC---EAFTLKEVIHGYVIKLGFSDEK-YVQ 440

Query: 767 NSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAF 880
           N+LM +Y+++GKI+ +K +F+    +D+VSWNT+I+ F
Sbjct: 441 NALMDLYSRMGKINISKYIFDNMESKDIVSWNTMITGF 478


>ref|XP_004233766.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Solanum lycopersicum]
          Length = 889

 Score =  357 bits (916), Expect = 4e-96
 Identities = 174/264 (65%), Positives = 217/264 (82%), Gaps = 1/264 (0%)
 Frame = +2

Query: 170 NPSPPLI-GKLCEPTSSDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAF 346
           +P+  LI  K  +  +S+  S  SWI++LRSQ R N F+EAI T+++M + GV PDNF F
Sbjct: 37  SPTSTLIFKKFQQEHTSETPSSASWIDTLRSQVRLNCFKEAIFTYIQMTSEGVRPDNFVF 96

Query: 347 PAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRI 526
           PAVLKAAT LQDL+LGKQI+G+VVK GYD+ SVTV N+++HL GRCG  +D V+K+FDRI
Sbjct: 97  PAVLKAATGLQDLNLGKQIYGAVVKFGYDTISVTVSNSVIHLLGRCGGSIDDVYKLFDRI 156

Query: 527 PQRDQVSWNSMINALCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLR 706
            QRDQVSWNS+INALCK+E+W LALEAFR+MG +  E SSFTLVS+ALACSNL R DGLR
Sbjct: 157 TQRDQVSWNSLINALCKFEKWELALEAFRLMGFDGFEASSFTLVSIALACSNLPRTDGLR 216

Query: 707 LGKQVHGYSLRVDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQ 886
           LGKQVHGYSLR+DDR+T+TNN+LM+MYAKLG++DD++ VFE FA RD+VSWNT+IS+FSQ
Sbjct: 217 LGKQVHGYSLRIDDRRTYTNNALMSMYAKLGRVDDSRAVFELFADRDIVSWNTIISSFSQ 276

Query: 887 SDRFYEALEYFIFMKDEGFKPDGV 958
           +D+F EAL+ F  M  E  KPDGV
Sbjct: 277 NDQFREALDSFRVMIQEEIKPDGV 300



 Score =  116 bits (291), Expect = 1e-23
 Identities = 77/249 (30%), Positives = 130/249 (52%), Gaps = 6/249 (2%)
 Frame = +2

Query: 224 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLD---LG 394
           R + SW   + +  +   +  A+  F  M   G    +F   ++  A + L   D   LG
Sbjct: 159 RDQVSWNSLINALCKFEKWELALEAFRLMGFDGFEASSFTLVSIALACSNLPRTDGLRLG 218

Query: 395 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 574
           KQ+HG  +++  D       N L+ +Y + G  VD    VF+    RD VSWN++I++  
Sbjct: 219 KQVHGYSLRI--DDRRTYTNNALMSMYAKLGR-VDDSRAVFELFADRDIVSWNTIISSFS 275

Query: 575 KYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDD-- 748
           + +++  AL++FR+M  E I+P   T+ SV  ACS+L   D   +GKQ+H Y L+ DD  
Sbjct: 276 QNDQFREALDSFRVMIQEEIKPDGVTISSVVPACSHLTLLD---VGKQIHCYVLKNDDLI 332

Query: 749 RKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFM 928
             +F ++SL+ MY    +++  + VF+    R +  WN +++ ++Q+  F EAL  FI M
Sbjct: 333 GNSFVDSSLVDMYCNCQQVESGRRVFDSALKRSIGIWNAMLAGYTQNGFFTEALMLFIEM 392

Query: 929 KD-EGFKPD 952
            +  G  P+
Sbjct: 393 LEFSGLSPN 401



 Score =  105 bits (262), Expect = 3e-20
 Identities = 80/260 (30%), Positives = 130/260 (50%), Gaps = 15/260 (5%)
 Frame = +2

Query: 224  RSKHSWIESLRSQARSNSFREAITTFVEM-QASGVLPDNFAFPAVLKAATALQDLDLGKQ 400
            RS   W   L    ++  F EA+  F+EM + SG+ P+     +V  A    +   L + 
Sbjct: 364  RSIGIWNAMLAGYTQNGFFTEALMLFIEMLEFSGLSPNPTTVASVFPACVHCEAFTLKEV 423

Query: 401  IHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINA--LC 574
            IHG V+KLG+      V N L+ LY R G  ++    +FD +  +D VSWN+MI    +C
Sbjct: 424  IHGYVIKLGFADEKY-VQNALMDLYSRMGK-INISKYIFDNMESKDIVSWNTMITGFVVC 481

Query: 575  KYEEWVLAL-----EAFRIMGLE-----RIEPSSFTLVSVALACSNLNRHDGLRLGKQVH 724
             Y E  L +        R    E     R++P+S TL++V   C++L     L  GK++H
Sbjct: 482  GYHEDALIMLHEMQTTKRHNDSENNVEFRLKPNSITLITVLPGCASLV---ALAKGKEIH 538

Query: 725  GYSLR-VDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFY 901
             Y++R          ++L+ MYAK G +D A+ VF     +++++WN +I A+    +  
Sbjct: 539  AYAIRNALAMDIAVGSALVDMYAKCGCLDIARRVFNSMTTKNVITWNVLIMAYGMHGKGE 598

Query: 902  EALEYF-IFMKDEGFKPDGV 958
            EAL+ F + + +   KP+ V
Sbjct: 599  EALQLFRMMVLERKVKPNNV 618



 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 67/218 (30%), Positives = 118/218 (54%), Gaps = 3/218 (1%)
 Frame = +2

Query: 236 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
           SW   + S ++++ FREA+ +F  M    + PD     +V+ A + L  LD+GKQIH  V
Sbjct: 266 SWNTIISSFSQNDQFREALDSFRVMIQEEIKPDGVTISSVVPACSHLTLLDVGKQIHCYV 325

Query: 416 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWVL 595
           +K      +  V ++L+ +Y  C   V+   +VFD   +R    WN+M+    +   +  
Sbjct: 326 LKNDDLIGNSFVDSSLVDMYCNC-QQVESGRRVFDSALKRSIGIWNAMLAGYTQNGFFTE 384

Query: 596 ALEAF-RIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD--DRKTFTN 766
           AL  F  ++    + P+  T+ SV  AC +    +   L + +HGY +++   D K +  
Sbjct: 385 ALMLFIEMLEFSGLSPNPTTVASVFPACVHC---EAFTLKEVIHGYVIKLGFADEK-YVQ 440

Query: 767 NSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAF 880
           N+LM +Y+++GKI+ +K +F+    +D+VSWNT+I+ F
Sbjct: 441 NALMDLYSRMGKINISKYIFDNMESKDIVSWNTMITGF 478


>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  332 bits (852), Expect = 1e-88
 Identities = 171/266 (64%), Positives = 204/266 (76%), Gaps = 1/266 (0%)
 Frame = +2

Query: 164 IQNPSP-PLIGKLCEPTSSDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNF 340
           IQ P+  PL  K     +S  RS  SW+++LRS+ RSN FREAI+T++EM  SG  PDNF
Sbjct: 34  IQKPTASPLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNF 93

Query: 341 AFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFD 520
           AFPAVLKA + LQDL  G+QIH + VK GY S SVTV NTL+++YG+CG  +  V KVFD
Sbjct: 94  AFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGG-IGDVCKVFD 152

Query: 521 RIPQRDQVSWNSMINALCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDG 700
           RI  RDQVSWNS I ALC++E+W  ALEAFR M +E +E SSFTLVSVALACSNL    G
Sbjct: 153 RITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHG 212

Query: 701 LRLGKQVHGYSLRVDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAF 880
           LRLGKQ+HGYSLRV D+KTFTNN+LMAMYAKLG++DD+K +FE F  RDMVSWNT+IS+F
Sbjct: 213 LRLGKQLHGYSLRVGDQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSF 272

Query: 881 SQSDRFYEALEYFIFMKDEGFKPDGV 958
           SQSDRF EAL +F  M  EG + DGV
Sbjct: 273 SQSDRFSEALAFFRLMVLEGVELDGV 298



 Score =  114 bits (284), Expect = 7e-23
 Identities = 80/249 (32%), Positives = 131/249 (52%), Gaps = 6/249 (2%)
 Frame = +2

Query: 224 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATAL---QDLDLG 394
           R + SW   + +  R   + +A+  F  MQ   +   +F   +V  A + L     L LG
Sbjct: 157 RDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLG 216

Query: 395 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 574
           KQ+HG  +++G D  + T  N L+ +Y + G  VD    +F+    RD VSWN+MI++  
Sbjct: 217 KQLHGYSLRVG-DQKTFTN-NALMAMYAKLGR-VDDSKALFESFVDRDMVSWNTMISSFS 273

Query: 575 KYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDD-- 748
           + + +  AL  FR+M LE +E    T+ SV  ACS+L R D   +GK++H Y LR +D  
Sbjct: 274 QSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLD---VGKEIHAYVLRNNDLI 330

Query: 749 RKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFM 928
             +F  ++L+ MY    +++  + VF+    R +  WN +IS ++++    +AL  FI M
Sbjct: 331 ENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEM 390

Query: 929 -KDEGFKPD 952
            K  G  P+
Sbjct: 391 IKVAGLLPN 399



 Score =  107 bits (267), Expect = 7e-21
 Identities = 72/234 (30%), Positives = 124/234 (52%), Gaps = 5/234 (2%)
 Frame = +2

Query: 224 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQI 403
           R   SW   + S ++S+ F EA+  F  M   GV  D     +VL A + L+ LD+GK+I
Sbjct: 260 RDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEI 319

Query: 404 HGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKY- 580
           H  V++      +  V + L+ +Y  C   V+   +VFD I  R    WN+MI+   +  
Sbjct: 320 HAYVLRNNDLIENSFVGSALVDMYCNCRQ-VESGRRVFDHILGRRIELWNAMISGYARNG 378

Query: 581 ---EEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDDR 751
              +  +L +E  ++ GL    P++ T+ SV  AC +          + +HGY++++  +
Sbjct: 379 LDEKALILFIEMIKVAGLL---PNTTTMASVMPACVHCEAFSNK---ESIHGYAVKLGFK 432

Query: 752 KT-FTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEAL 910
           +  +  N+LM MY+++GK+D ++ +F+    RD VSWNT+I+ +  S R+  AL
Sbjct: 433 EDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNAL 486



 Score = 91.7 bits (226), Expect = 4e-16
 Identities = 68/246 (27%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
 Frame = +2

Query: 239  WIESLRSQARSNSFREAITTFVEM-QASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
            W   +   AR+    +A+  F+EM + +G+LP+     +V+ A    +     + IHG  
Sbjct: 367  WNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYA 426

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC---KYEE 586
            VKLG+      V N L+ +Y R G  +D    +FD +  RD+VSWN+MI       +Y  
Sbjct: 427  VKLGFKEDRY-VQNALMDMYSRMGK-MDISETIFDSMEVRDRVSWNTMITGYVLSGRYSN 484

Query: 587  WVLALEAFRIMGLER--------------IEPSSFTLVSVALACSNLNRHDGLRLGKQVH 724
             ++ L   + M   +               +P++ TL++V   C+ L     +  GK++H
Sbjct: 485  ALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALA---AIAKGKEIH 541

Query: 725  GYSLRVDDRKTFT-NNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFY 901
             Y++R       T  ++L+ MYAK G ++ ++ VF    ++++++WN +I A     +  
Sbjct: 542  AYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGE 601

Query: 902  EALEYF 919
            EALE F
Sbjct: 602  EALELF 607


>gb|EMJ25188.1| hypothetical protein PRUPE_ppa014757mg [Prunus persica]
          Length = 901

 Score =  328 bits (840), Expect = 2e-87
 Identities = 163/248 (65%), Positives = 201/248 (81%)
 Frame = +2

Query: 215 SDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLG 394
           S  R+  SWIE+LRSQ RSN FREAI T++EM  SG++PDNFAFPAVLKA T+LQDL+LG
Sbjct: 57  SHSRTPASWIETLRSQTRSNHFREAILTYIEMTLSGIVPDNFAFPAVLKAVTSLQDLNLG 116

Query: 395 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 574
           KQIH  +VK GY S SVTV NTL+++YG+CGD +    KVFD I +RDQVSWNSMI ALC
Sbjct: 117 KQIHAHIVKFGYGSSSVTVANTLVNVYGKCGD-IGDACKVFDGIIERDQVSWNSMIAALC 175

Query: 575 KYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDDRK 754
           ++EEW LALEAFR M +E +EPSSFTLVSVALACSNL++ DGLRLGKQVH YS+R+ + K
Sbjct: 176 RFEEWELALEAFRSMLMENMEPSSFTLVSVALACSNLHKRDGLRLGKQVHAYSVRMSECK 235

Query: 755 TFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFMKD 934
           TFT N+L+AMY+KLG+ + ++ +FE +   DMVSWNT+IS+ SQ+D+F EALE+F  M  
Sbjct: 236 TFTINALLAMYSKLGEAEYSRALFELYEDCDMVSWNTMISSLSQNDQFMEALEFFRLMVL 295

Query: 935 EGFKPDGV 958
            GFKPDGV
Sbjct: 296 AGFKPDGV 303



 Score =  112 bits (279), Expect = 3e-22
 Identities = 75/253 (29%), Positives = 129/253 (50%), Gaps = 6/253 (2%)
 Frame = +2

Query: 188 IGKLCEPTSSDI-RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKA 364
           IG  C+     I R + SW   + +  R   +  A+  F  M    + P +F   +V  A
Sbjct: 149 IGDACKVFDGIIERDQVSWNSMIAALCRFEEWELALEAFRSMLMENMEPSSFTLVSVALA 208

Query: 365 ATALQDLD---LGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQR 535
            + L   D   LGKQ+H   V++  +  + T+ N LL +Y + G+  +    +F+     
Sbjct: 209 CSNLHKRDGLRLGKQVHAYSVRMS-ECKTFTI-NALLAMYSKLGE-AEYSRALFELYEDC 265

Query: 536 DQVSWNSMINALCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGK 715
           D VSWN+MI++L + ++++ ALE FR+M L   +P   T+ SV  ACS+L   D    GK
Sbjct: 266 DMVSWNTMISSLSQNDQFMEALEFFRLMVLAGFKPDGVTVASVLPACSHLEMLD---TGK 322

Query: 716 QVHGYSLRVDD--RKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQS 889
           ++H Y+LR ++    ++  ++L+ MY    ++     VF     R +  WN +I+ ++Q+
Sbjct: 323 EIHAYALRTNELIENSYVGSALVDMYCNCRQVSSGCRVFNAVLERKIALWNAMITGYAQN 382

Query: 890 DRFYEALEYFIFM 928
           +   EAL  F+ M
Sbjct: 383 EYNKEALNLFLEM 395



 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 74/254 (29%), Positives = 126/254 (49%), Gaps = 20/254 (7%)
 Frame = +2

Query: 239  WIESLRSQARSNSFREAITTFVEM-QASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
            W   +   A++   +EA+  F+EM  ASG+ P++    +++ A+   +     + IHG V
Sbjct: 372  WNAMITGYAQNEYNKEALNLFLEMCAASGLSPNSTTMSSIVPASVRCEAFSDKESIHGYV 431

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFK-VFDRIPQRDQVSWNSMINA--LCKYEE 586
            +K G + +   V N L+ +Y R G    Q+ + +F+ +  RD VSWN+MI    +C    
Sbjct: 432  IKRGLEKNRY-VQNALMDMYSRMGKT--QISETIFNSMEVRDIVSWNTMITGYVICGRHG 488

Query: 587  WVLAL---------------EAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQV 721
              L L                A+   G   ++P+S T +++   C+ L     L  GK++
Sbjct: 489  DALNLIYDMQRVKEKKNMNDNAYDDEGRVPLKPNSITFMTILPGCAALA---ALAKGKEI 545

Query: 722  HGYSLR-VDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRF 898
            H Y+++ +        ++L+ MYAK G ID A+ VF     +++++WN +I A+    R 
Sbjct: 546  HSYAIKHLLAFDVAVGSALVDMYAKCGCIDLARAVFNQIPIKNVITWNVLIMAYGMHGRG 605

Query: 899  YEALEYFIFMKDEG 940
             EALE F  M DEG
Sbjct: 606  EEALELFKNMVDEG 619


>ref|XP_006448595.1| hypothetical protein CICLE_v10014221mg [Citrus clementina]
           gi|557551206|gb|ESR61835.1| hypothetical protein
           CICLE_v10014221mg [Citrus clementina]
          Length = 882

 Score =  327 bits (838), Expect = 4e-87
 Identities = 165/266 (62%), Positives = 199/266 (74%), Gaps = 1/266 (0%)
 Frame = +2

Query: 164 IQNPSPPLIGKLCEPT-SSDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNF 340
           +Q   PP       P   S  RSK SWIESLRSQ RSN FREAI +++EM  S + PDNF
Sbjct: 19  LQTHQPPATTATSLPLPGSQTRSKESWIESLRSQTRSNQFREAILSYIEMTRSDIQPDNF 78

Query: 341 AFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFD 520
           AFPAVLKA   +QDL LGKQIH  VVK GY   SVTV NTL+++YG+CG D+  V+KVFD
Sbjct: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138

Query: 521 RIPQRDQVSWNSMINALCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDG 700
           RI ++DQVSWNSMI  LC++E+W LALEAFR+M    +EPSSFTLVSVALACSNL+R DG
Sbjct: 139 RITEKDQVSWNSMIATLCRFEKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198

Query: 701 LRLGKQVHGYSLRVDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAF 880
           LRLG+QVHG SLRV +  TF  N+LMAMYAKLG++DDAK +F+ F   D+VSWNT+IS+ 
Sbjct: 199 LRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDCDLVSWNTIISSS 258

Query: 881 SQSDRFYEALEYFIFMKDEGFKPDGV 958
           SQ+D+F EA+ +   M   G KPDGV
Sbjct: 259 SQNDKFLEAVMFLRQMALRGIKPDGV 284



 Score =  107 bits (268), Expect = 5e-21
 Identities = 71/240 (29%), Positives = 128/240 (53%), Gaps = 7/240 (2%)
 Frame = +2

Query: 236 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLD---LGKQIH 406
           SW   + +  R   +  A+  F  M  S V P +F   +V  A + L   D   LG+Q+H
Sbjct: 147 SWNSMIATLCRFEKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206

Query: 407 GSVVKLGYDSHSVTVCNTLLHLYGRCG--DDVDQVFKVFDRIPQRDQVSWNSMINALCKY 580
           G+ +++G    +  + N L+ +Y + G  DD   +FK F+     D VSWN++I++  + 
Sbjct: 207 GNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDC---DLVSWNTIISSSSQN 261

Query: 581 EEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD--DRK 754
           ++++ A+   R M L  I+P   ++ SV  ACS+L   D    GK++H Y+LR D     
Sbjct: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD---TGKEIHAYALRNDILIDN 318

Query: 755 TFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFMKD 934
           +F  ++L+ MY    +++  + VF+  + + +  WN +I+ ++Q++   EAL  FI M++
Sbjct: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYAQNEYDEEALMLFIKMEE 378



 Score =  100 bits (249), Expect = 8e-19
 Identities = 66/227 (29%), Positives = 121/227 (53%), Gaps = 2/227 (0%)
 Frame = +2

Query: 236 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
           SW   + S ++++ F EA+    +M   G+ PD  +  +VL A + L+ LD GK+IH   
Sbjct: 250 SWNTIISSSSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309

Query: 416 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWVL 595
           ++      +  V + L+ +Y  C + V+   +VFD I  +    WN+MI    + E    
Sbjct: 310 LRNDILIDNSFVGSALVDMYCNCRE-VECGRRVFDFISDKKIALWNAMITGYAQNEYDEE 368

Query: 596 ALEAF-RIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD-DRKTFTNN 769
           AL  F ++  +  + P++ TL SV   C    R +     + +HG+++++   R  +  N
Sbjct: 369 ALMLFIKMEEVAGLWPNATTLSSVVPVCV---RSEAFPDKEGIHGHAIKLGLGRDRYVQN 425

Query: 770 SLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEAL 910
           +LM MY+++G+I+ +K +F+    RD VSWNT+I+ ++   +  +AL
Sbjct: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICSQHGDAL 472



 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 70/253 (27%), Positives = 121/253 (47%), Gaps = 19/253 (7%)
 Frame = +2

Query: 239  WIESLRSQARSNSFREAITTFVEMQ-ASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
            W   +   A++    EA+  F++M+  +G+ P+     +V+      +     + IHG  
Sbjct: 353  WNAMITGYAQNEYDEEALMLFIKMEEVAGLWPNATTLSSVVPVCVRSEAFPDKEGIHGHA 412

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINA--LC-KYEE 586
            +KLG       V N L+ +Y R G  ++    +FD +  RD VSWN+MI    +C ++ +
Sbjct: 413  IKLGLGRDRY-VQNALMDMYSRMGR-IEISKTIFDDMEVRDTVSWNTMITGYTICSQHGD 470

Query: 587  WVLALEAFRIMGLE--------------RIEPSSFTLVSVALACSNLNRHDGLRLGKQVH 724
             ++ L   + M  E              R +P+S TL++V   C  L+    L  GK++H
Sbjct: 471  ALMLLREMQNMEEEKNRNNVYDLDERVLRPKPNSITLMTVLPGCGALS---ALAKGKEIH 527

Query: 725  GYSLR-VDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFY 901
             Y++R +        ++L+ MYAK G ++ A+ VF+    R+++SWN +I A+       
Sbjct: 528  AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVISWNVIIMAYGMHGEGR 587

Query: 902  EALEYFIFMKDEG 940
            E LE    M  EG
Sbjct: 588  EVLELLKNMVTEG 600


>ref|XP_006468579.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Citrus sinensis]
          Length = 882

 Score =  325 bits (834), Expect = 1e-86
 Identities = 159/248 (64%), Positives = 194/248 (78%)
 Frame = +2

Query: 215 SDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLG 394
           S  RSK SWIESLRSQ RSN FREAI +++EM  S + PDNFAFP+VLKA   +QDL LG
Sbjct: 37  SQTRSKESWIESLRSQTRSNQFREAILSYIEMTRSDIQPDNFAFPSVLKAVAGIQDLSLG 96

Query: 395 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 574
           KQIH  VVK GY   SVTV NTL+++YG+CG D+  V+KVFDRI ++DQVSWNSMI  LC
Sbjct: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156

Query: 575 KYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDDRK 754
           ++ +W LALEAFR+M    +EPSSFTLVSVALACSNL+R DGLRLG+QVHG SLRV +  
Sbjct: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216

Query: 755 TFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFMKD 934
           TF  N+LMAMYAKLG++DDAK +F+ F  RD+VSWNT++S+ SQ+D+F EA+ +   M  
Sbjct: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276

Query: 935 EGFKPDGV 958
            G KPDGV
Sbjct: 277 RGIKPDGV 284



 Score =  112 bits (280), Expect = 2e-22
 Identities = 72/240 (30%), Positives = 129/240 (53%), Gaps = 7/240 (2%)
 Frame = +2

Query: 236 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLD---LGKQIH 406
           SW   + +  R   +  A+  F  M  S V P +F   +V  A + L   D   LG+Q+H
Sbjct: 147 SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206

Query: 407 GSVVKLGYDSHSVTVCNTLLHLYGRCG--DDVDQVFKVFDRIPQRDQVSWNSMINALCKY 580
           G+ +++G    +  + N L+ +Y + G  DD   +FK F+    RD VSWN+++++L + 
Sbjct: 207 GNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE---DRDLVSWNTIVSSLSQN 261

Query: 581 EEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD--DRK 754
           ++++ A+   R M L  I+P   ++ SV  ACS+L   D    GK++H Y+LR D     
Sbjct: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD---TGKEIHAYALRNDILIDN 318

Query: 755 TFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFMKD 934
           +F  ++L+ MY    +++  + VF+  + + +  WN +I+ + Q++   EAL  FI M++
Sbjct: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378



 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 68/235 (28%), Positives = 125/235 (53%), Gaps = 2/235 (0%)
 Frame = +2

Query: 212 SSDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDL 391
           S + R   SW   + S ++++ F EA+    +M   G+ PD  +  +VL A + L+ LD 
Sbjct: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301

Query: 392 GKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINAL 571
           GK+IH   ++      +  V + L+ +Y  C + V+   +VFD I  +    WN+MI   
Sbjct: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCRE-VECGRRVFDFISDKKIALWNAMITGY 360

Query: 572 CKYEEWVLALEAF-RIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD- 745
            + E    AL  F ++  +  + P++ T+ SV  AC    R +     + +HG+++++  
Sbjct: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV---RSEAFPDKEGIHGHAIKLGL 417

Query: 746 DRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEAL 910
            R  +  N+LM MY+++G+I+ +K +F+    RD VSWNT+I+ ++   +  +AL
Sbjct: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472



 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 68/253 (26%), Positives = 121/253 (47%), Gaps = 19/253 (7%)
 Frame = +2

Query: 239  WIESLRSQARSNSFREAITTFVEMQ-ASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
            W   +    ++    EA+  F++M+  +G+ P+     +V+ A    +     + IHG  
Sbjct: 353  WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINA--LC-KYEE 586
            +KLG       V N L+ +Y R G  ++    +FD +  RD VSWN+MI    +C ++ +
Sbjct: 413  IKLGLGRDRY-VQNALMDMYSRMGR-IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470

Query: 587  WVLALEAFRIMGLE--------------RIEPSSFTLVSVALACSNLNRHDGLRLGKQVH 724
             ++ L   + M  +              R +P+S TL++V   C  L+    L  GK++H
Sbjct: 471  ALMLLREMQNMEEDKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS---ALAKGKEIH 527

Query: 725  GYSLR-VDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFY 901
             Y++R +        ++L+ MYAK G ++ A+ VF+    R++++WN +I A+       
Sbjct: 528  AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587

Query: 902  EALEYFIFMKDEG 940
            E LE    M  EG
Sbjct: 588  EVLELLKNMVAEG 600


>ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527557|gb|EEF29678.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 679

 Score =  311 bits (798), Expect = 2e-82
 Identities = 153/248 (61%), Positives = 192/248 (77%)
 Frame = +2

Query: 215 SDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLG 394
           S  RS+ SWIESLR   RSN FREAI+T+V+M  SGV PD++AFP VLKA T LQDL+LG
Sbjct: 37  SQSRSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLG 96

Query: 395 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 574
           KQIH  VVK GY+S SV + N+L++ YG+C + +D V+KVFDRI +RD VSWNS+I+A C
Sbjct: 97  KQIHAHVVKYGYESSSVAIANSLVNFYGKCSE-LDDVYKVFDRINERDLVSWNSLISAFC 155

Query: 575 KYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDDRK 754
           + +EW LALEAFR M  E +EPSSFTLVS  +ACSNL +H+GLRLGKQ+HGY  R     
Sbjct: 156 RAQEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHWS 215

Query: 755 TFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFMKD 934
           TFTNN+LM MYA LG++DDAK +F+ F  R+++SWNT+IS+FSQ++RF EAL    +M  
Sbjct: 216 TFTNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVL 275

Query: 935 EGFKPDGV 958
           EG KPDGV
Sbjct: 276 EGVKPDGV 283



 Score =  115 bits (287), Expect = 3e-23
 Identities = 78/238 (32%), Positives = 125/238 (52%), Gaps = 7/238 (2%)
 Frame = +2

Query: 236 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATAL---QDLDLGKQIH 406
           SW   + +  R+  +  A+  F  M A  + P +F   + + A + L   + L LGKQIH
Sbjct: 146 SWNSLISAFCRAQEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIH 205

Query: 407 GSVVKLGYDSHSVTVCNTLLHLYGRCG--DDVDQVFKVFDRIPQRDQVSWNSMINALCKY 580
           G   + G+   S    N L+ +Y   G  DD   +FK+F+    R+ +SWN+MI++  + 
Sbjct: 206 GYCFRNGH--WSTFTNNALMTMYANLGRLDDAKFLFKLFE---DRNLISWNTMISSFSQN 260

Query: 581 EEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDD--RK 754
           E +V AL + R M LE ++P   TL SV  ACS L   + L  GK++H Y+LR  D    
Sbjct: 261 ERFVEALMSLRYMVLEGVKPDGVTLASVLPACSYL---EMLGTGKEIHAYALRSGDLIEN 317

Query: 755 TFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFM 928
           +F  ++L+ MY   G++   + VF+    R    WN +I+ ++Q++   +AL  FI M
Sbjct: 318 SFVGSALVDMYCNCGQVGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEM 375



 Score =  103 bits (258), Expect = 7e-20
 Identities = 70/231 (30%), Positives = 122/231 (52%), Gaps = 2/231 (0%)
 Frame = +2

Query: 224 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQI 403
           R+  SW   + S +++  F EA+ +   M   GV PD     +VL A + L+ L  GK+I
Sbjct: 245 RNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVLPACSYLEMLGTGKEI 304

Query: 404 HGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYE 583
           H   ++ G    +  V + L+ +Y  CG  V    +VFD I +R    WN+MI    + E
Sbjct: 305 HAYALRSGDLIENSFVGSALVDMYCNCGQ-VGSGRRVFDGILERKTGLWNAMIAGYAQNE 363

Query: 584 EWVLALEAF-RIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD-DRKT 757
               AL  F  ++ +  + P++ T+ S+  A +   R +     + +HGY ++ D +R  
Sbjct: 364 HDEKALMLFIEMVAVAGLCPNTTTMASIVPASA---RCESFFSKESIHGYVIKRDLERDR 420

Query: 758 FTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEAL 910
           +  N+LM MY+++ K++ +K +F+    RD+VSWNT+I+ +  S  + +AL
Sbjct: 421 YVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMITGYVISGCYNDAL 471



 Score = 84.3 bits (207), Expect = 6e-14
 Identities = 70/255 (27%), Positives = 123/255 (48%), Gaps = 15/255 (5%)
 Frame = +2

Query: 239  WIESLRSQARSNSFREAITTFVEMQA-SGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
            W   +   A++    +A+  F+EM A +G+ P+     +++ A+   +     + IHG V
Sbjct: 352  WNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSKESIHGYV 411

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMI----------N 565
            +K   +     V N L+ +Y R    ++    +FD +  RD VSWN+MI          +
Sbjct: 412  IKRDLERDRY-VQNALMDMYSRMRK-MEISKTIFDSMEVRDIVSWNTMITGYVISGCYND 469

Query: 566  ALCKYEEWVLALEAFRIMGLER---IEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSL 736
            AL    E   A E       ++    +P+S TL++V   C++L     L  GK++H Y++
Sbjct: 470  ALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLA---ALAKGKEIHAYAV 526

Query: 737  RVDDRKTFT-NNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALE 913
            R       T  ++L+ MYAK G ++ ++ VF+    +++++WN ++ A+       EALE
Sbjct: 527  RNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEEALE 586

Query: 914  YFIFMKDEGFKPDGV 958
             F   KD   K D V
Sbjct: 587  LF---KDMVAKGDNV 598


>ref|XP_004295518.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 893

 Score =  310 bits (794), Expect = 5e-82
 Identities = 152/262 (58%), Positives = 196/262 (74%)
 Frame = +2

Query: 173 PSPPLIGKLCEPTSSDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPA 352
           P  P+       T   I    +WI+++R+Q RS  + EAI+T++ M  SG+ PDNFAFPA
Sbjct: 35  PPKPITITTTTSTPKPISDSRTWIDTIRTQTRSGHYNEAISTYINMTRSGIRPDNFAFPA 94

Query: 353 VLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQ 532
           VLKA  AL DL LG+Q+H  VVK GY+S SVTV N+L+++YG+CGD +   +KVFD + +
Sbjct: 95  VLKAVAALHDLRLGQQVHACVVKFGYESGSVTVANSLVNVYGKCGD-IGDAYKVFDGMTE 153

Query: 533 RDQVSWNSMINALCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLG 712
           RDQVSWNSMI ALC++EEW LALEAFR M  + + PSSFTLVS ALACSNL++ DGLRLG
Sbjct: 154 RDQVSWNSMIAALCRFEEWELALEAFRSMFEDNVVPSSFTLVSAALACSNLDKRDGLRLG 213

Query: 713 KQVHGYSLRVDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSD 892
           KQVHGYS+R+ + KTFT N+LM+MYAKLG +  ++ VFE F   D+VSWNT++S+ SQ+D
Sbjct: 214 KQVHGYSVRMCESKTFTVNALMSMYAKLGMVGYSRGVFELFEECDLVSWNTMVSSLSQND 273

Query: 893 RFYEALEYFIFMKDEGFKPDGV 958
           RF EALE+F  M  EG +PDGV
Sbjct: 274 RFMEALEFFRLMILEGIRPDGV 295



 Score =  117 bits (292), Expect = 8e-24
 Identities = 75/240 (31%), Positives = 130/240 (54%), Gaps = 5/240 (2%)
 Frame = +2

Query: 224 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLD---LG 394
           R + SW   + +  R   +  A+  F  M    V+P +F   +   A + L   D   LG
Sbjct: 154 RDQVSWNSMIAALCRFEEWELALEAFRSMFEDNVVPSSFTLVSAALACSNLDKRDGLRLG 213

Query: 395 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 574
           KQ+HG  V++  +S + TV N L+ +Y + G  V     VF+   + D VSWN+M+++L 
Sbjct: 214 KQVHGYSVRM-CESKTFTV-NALMSMYAKLGM-VGYSRGVFELFEECDLVSWNTMVSSLS 270

Query: 575 KYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDD-- 748
           + + ++ ALE FR+M LE I P   T+ SV  ACS+L   + L  GK++H Y+LR ++  
Sbjct: 271 QNDRFMEALEFFRLMILEGIRPDGVTIASVLPACSHL---EMLEAGKEIHAYALRANELT 327

Query: 749 RKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFM 928
             ++  ++L+ MY    +++  + VF+      +  WN +I+ ++Q++   EAL+ F+ M
Sbjct: 328 GNSYVGSALVDMYCNCREVESGRRVFDAVMEWKVPLWNAMITGYAQNEYDEEALDLFLEM 387



 Score = 97.8 bits (242), Expect = 5e-18
 Identities = 63/234 (26%), Positives = 119/234 (50%), Gaps = 2/234 (0%)
 Frame = +2

Query: 236 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
           SW   + S ++++ F EA+  F  M   G+ PD     +VL A + L+ L+ GK+IH   
Sbjct: 261 SWNTMVSSLSQNDRFMEALEFFRLMILEGIRPDGVTIASVLPACSHLEMLEAGKEIHAYA 320

Query: 416 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWVL 595
           ++    + +  V + L+ +Y  C + V+   +VFD + +     WN+MI    + E    
Sbjct: 321 LRANELTGNSYVGSALVDMYCNCRE-VESGRRVFDAVMEWKVPLWNAMITGYAQNEYDEE 379

Query: 596 ALEAFRIM-GLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD-DRKTFTNN 769
           AL+ F  M  +  + P++ T+ S+  AC       G    + +H + ++   ++  +  N
Sbjct: 380 ALDLFLEMYAVSGLNPNATTMSSIVPACVRCEAFSGK---ESIHAFVIKRSLEKNRYIQN 436

Query: 770 SLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFMK 931
           +LM MY+++G+   ++ +F     +D+VSWNT+I+ +  S R  +AL     M+
Sbjct: 437 ALMDMYSRMGRTGISETIFNSMEGKDIVSWNTMITGYVISGRHDDALNLLYEMQ 490



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 66/256 (25%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
 Frame = +2

Query: 239  WIESLRSQARSNSFREAITTFVEMQA-SGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
            W   +   A++    EA+  F+EM A SG+ P+     +++ A    +     + IH  V
Sbjct: 364  WNAMITGYAQNEYDEEALDLFLEMYAVSGLNPNATTMSSIVPACVRCEAFSGKESIHAFV 423

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCG-DDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWV 592
            +K   + +   + N L+ +Y R G   + +   +F+ +  +D VSWN+MI          
Sbjct: 424  IKRSLEKNRY-IQNALMDMYSRMGRTGISET--IFNSMEGKDIVSWNTMITGYVISGRHD 480

Query: 593  LALEAFRIMGLERIE-------------------PSSFTLVSVALACSNLNRHDGLRLGK 715
             AL    +  ++R+E                   P++ TL+++  +C+ L+    L  GK
Sbjct: 481  DALNL--LYEMQRVEENKNTDSTGYDDERRVPLKPNTITLMTLLPSCAVLS---ALAKGK 535

Query: 716  QVHGYSLR-VDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSD 892
            ++H Y+ R +        ++L+ MYAK G +D ++ +F     +++++WN +I A+    
Sbjct: 536  EIHAYATRHLLALDIAVGSALVDMYAKCGCLDLSRAMFNQMPLKNVITWNVLIMAYGMHG 595

Query: 893  RFYEALEYFIFMKDEG 940
            R  EALE F  M DEG
Sbjct: 596  RGEEALELFKNMVDEG 611


>gb|EOX96826.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 955

 Score =  308 bits (788), Expect = 3e-81
 Identities = 156/253 (61%), Positives = 191/253 (75%), Gaps = 2/253 (0%)
 Frame = +2

Query: 206 PTSSDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDL 385
           PT +   S+ SW ESLRS  RSN F +AI T+V M +SG+ PD+FAFPAVLKA TAL DL
Sbjct: 108 PTKTRSLSQGSWTESLRSNTRSNRFHQAILTYVSMSSSGIPPDHFAFPAVLKAVTALHDL 167

Query: 386 DLGKQIHGSVVKLGYD--SHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSM 559
            LGKQIH  V+K GY   + SVTV NTL++ YG+CGD  D V+KVFDRI QRD VSWNS 
Sbjct: 168 ALGKQIHAQVLKFGYGFGTSSVTVANTLVNFYGKCGDIWD-VYKVFDRIHQRDTVSWNSF 226

Query: 560 INALCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLR 739
           I+A C+ E+W  ALEAFR+M L+ +EPSSFTLVS+A ACSNL   DGL LGKQ+H YSLR
Sbjct: 227 ISAFCRLEDWEAALEAFRLMLLDNVEPSSFTLVSIAHACSNLPSRDGLHLGKQLHAYSLR 286

Query: 740 VDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYF 919
           + D KTFT N+LM MY+KLG ++DAK++FE F  RD++SWNT++S+ SQ+D+F EAL   
Sbjct: 287 IGDAKTFTYNALMTMYSKLGHLNDAKLLFELFKERDLISWNTMLSSLSQNDKFTEALLLL 346

Query: 920 IFMKDEGFKPDGV 958
             M  EG KPDGV
Sbjct: 347 HRMVLEGLKPDGV 359



 Score =  110 bits (276), Expect = 6e-22
 Identities = 75/243 (30%), Positives = 127/243 (52%), Gaps = 7/243 (2%)
 Frame = +2

Query: 224 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLD---LG 394
           R   SW   + +  R   +  A+  F  M    V P +F   ++  A + L   D   LG
Sbjct: 218 RDTVSWNSFISAFCRLEDWEAALEAFRLMLLDNVEPSSFTLVSIAHACSNLPSRDGLHLG 277

Query: 395 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCG--DDVDQVFKVFDRIPQRDQVSWNSMINA 568
           KQ+H   +++G D+ + T  N L+ +Y + G  +D   +F++F    +RD +SWN+M+++
Sbjct: 278 KQLHAYSLRIG-DAKTFTY-NALMTMYSKLGHLNDAKLLFELFK---ERDLISWNTMLSS 332

Query: 569 LCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD- 745
           L + +++  AL     M LE ++P   T+ SV  ACS+L   D   +GKQ+H Y+LR D 
Sbjct: 333 LSQNDKFTEALLLLHRMVLEGLKPDGVTIASVLPACSHLELLD---IGKQLHAYALRHDI 389

Query: 746 -DRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFI 922
               +F  ++L+ MY    K    + VF+C   +    WN +I+ +SQ++   +AL  FI
Sbjct: 390 LIDNSFVGSALVDMYCNCRKAQSGRQVFDCVIDKKTGLWNAMITGYSQNEHDEDALILFI 449

Query: 923 FMK 931
            M+
Sbjct: 450 EME 452



 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 74/258 (28%), Positives = 127/258 (49%), Gaps = 22/258 (8%)
 Frame = +2

Query: 239  WIESLRSQARSNSFREAITTFVEMQA-SGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
            W   +   +++    +A+  F+EM+A +G+ P+     +++ A    +     + IHG V
Sbjct: 428  WNAMITGYSQNEHDEDALILFIEMEAVAGLCPNATTMASIVPACVRSEAFVHKQGIHGYV 487

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFK-VFDRIPQRDQVSWNSMINA--LCKYEE 586
            VK G  S    V N L+ +Y R G    Q+ K +FD +  RD VSWN+MI    +C + +
Sbjct: 488  VKRGLASDPY-VQNALMDMYCRMGKI--QISKTIFDNMEVRDIVSWNTMITGYVICGHHD 544

Query: 587  WVLALEAFRIMGLERIE-----------------PSSFTLVSVALACSNLNRHDGLRLGK 715
              L L    +  ++R+E                 P+S TL++V   C+ L+    L  GK
Sbjct: 545  NALLL----LHEMQRVEQEKSADYYEDEKRIPLKPNSITLMTVLPGCATLS---ALSKGK 597

Query: 716  QVHGYSLR-VDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSD 892
            ++H Y++R +        ++L+ MYAK G ++  + VF+    R++++WN +I A+    
Sbjct: 598  EIHAYAIRNMLASDVGVGSALVDMYAKCGCLNFCRKVFDIIPLRNVITWNVIIMAYGMHG 657

Query: 893  RFYEALEYFIFMKDEGFK 946
            +  EALE F  M  E  K
Sbjct: 658  KGAEALELFNCMVAEASK 675



 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 5/220 (2%)
 Frame = +2

Query: 236 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
           SW   L S ++++ F EA+     M   G+ PD     +VL A + L+ LD+GKQ+H   
Sbjct: 325 SWNTMLSSLSQNDKFTEALLLLHRMVLEGLKPDGVTIASVLPACSHLELLDIGKQLHAYA 384

Query: 416 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEE--- 586
           ++      +  V + L+ +Y  C        +VFD +  +    WN+MI    + E    
Sbjct: 385 LRHDILIDNSFVGSALVDMYCNCRK-AQSGRQVFDCVIDKKTGLWNAMITGYSQNEHDED 443

Query: 587 -WVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD-DRKTF 760
             +L +E   + GL    P++ T+ S+  AC    R +     + +HGY ++       +
Sbjct: 444 ALILFIEMEAVAGLC---PNATTMASIVPACV---RSEAFVHKQGIHGYVVKRGLASDPY 497

Query: 761 TNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAF 880
             N+LM MY ++GKI  +K +F+    RD+VSWNT+I+ +
Sbjct: 498 VQNALMDMYCRMGKIQISKTIFDNMEVRDIVSWNTMITGY 537


>gb|EXB83263.1| hypothetical protein L484_011557 [Morus notabilis]
          Length = 877

 Score =  307 bits (787), Expect = 3e-81
 Identities = 159/242 (65%), Positives = 188/242 (77%), Gaps = 1/242 (0%)
 Frame = +2

Query: 236 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
           SWIESLRSQ R+N FR+A++T+  M  + + PDNFAFP +LKAAT+L+DL LG+QIH  V
Sbjct: 43  SWIESLRSQVRNNLFRDAVSTYTSMTMA-IPPDNFAFPPILKAATSLRDLSLGRQIHAHV 101

Query: 416 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWVL 595
            K GY S SVTV NTL+++YG+CGD +    KVFDRIPQRDQVSWNSMI ALC + EW L
Sbjct: 102 FKFGYASSSVTVANTLVNMYGKCGD-IGDAHKVFDRIPQRDQVSWNSMIAALCHFGEWAL 160

Query: 596 ALEAFRIM-GLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDDRKTFTNNS 772
           ALEAFR M   E ++PSSFTLVSV+LACSNL R  GL LGKQVHGYSLR DDRKTFT N+
Sbjct: 161 ALEAFRAMLAEENVDPSSFTLVSVSLACSNLERFYGLWLGKQVHGYSLRKDDRKTFTINA 220

Query: 773 LMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFMKDEGFKPD 952
           LMAMYAKLG++DD+  +FE F +RD+VSWNTVIS+ SQ+D F EAL     M  EG   D
Sbjct: 221 LMAMYAKLGRVDDSVALFELFENRDLVSWNTVISSLSQNDMFVEALALLRRMVREGVGLD 280

Query: 953 GV 958
           GV
Sbjct: 281 GV 282



 Score =  106 bits (264), Expect = 1e-20
 Identities = 75/241 (31%), Positives = 119/241 (49%), Gaps = 6/241 (2%)
 Frame = +2

Query: 224 RSKHSWIESLRSQARSNSFREAITTFVEMQAS-GVLPDNFAFPAVLKAATALQ---DLDL 391
           R + SW   + +      +  A+  F  M A   V P +F   +V  A + L+    L L
Sbjct: 140 RDQVSWNSMIAALCHFGEWALALEAFRAMLAEENVDPSSFTLVSVSLACSNLERFYGLWL 199

Query: 392 GKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINAL 571
           GKQ+HG    L  D       N L+ +Y + G  VD    +F+    RD VSWN++I++L
Sbjct: 200 GKQVHG--YSLRKDDRKTFTINALMAMYAKLGR-VDDSVALFELFENRDLVSWNTVISSL 256

Query: 572 CKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDD- 748
            + + +V AL   R M  E +     T+ SV  ACS+L   D   LGK++H Y++R DD 
Sbjct: 257 SQNDMFVEALALLRRMVREGVGLDGVTIASVLPACSHLEMLD---LGKEIHAYAVRNDDL 313

Query: 749 -RKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIF 925
              +F  ++L+ MY    ++   + VF+    R    WN +I+ ++Q++   EAL  F+ 
Sbjct: 314 IENSFVGSALVDMYCNCRRVKTGRRVFDSILERKTALWNAMIAGYAQNEFDEEALNLFLE 373

Query: 926 M 928
           M
Sbjct: 374 M 374



 Score = 97.4 bits (241), Expect = 7e-18
 Identities = 65/217 (29%), Positives = 114/217 (52%), Gaps = 2/217 (0%)
 Frame = +2

Query: 236 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
           SW   + S ++++ F EA+     M   GV  D     +VL A + L+ LDLGK+IH   
Sbjct: 248 SWNTVISSLSQNDMFVEALALLRRMVREGVGLDGVTIASVLPACSHLEMLDLGKEIHAYA 307

Query: 416 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWVL 595
           V+      +  V + L+ +Y  C   V    +VFD I +R    WN+MI    + E    
Sbjct: 308 VRNDDLIENSFVGSALVDMYCNC-RRVKTGRRVFDSILERKTALWNAMIAGYAQNEFDEE 366

Query: 596 ALEAF-RIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD-DRKTFTNN 769
           AL  F  ++ +  + P++ T+ S+  AC+   R   L   + +HGY +++  +   +  N
Sbjct: 367 ALNLFLEMLAVLGLSPNATTMASIVPACA---RCKALCDKESIHGYVVKMGLEGDRYVQN 423

Query: 770 SLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAF 880
           +LM  Y+++GKI+ ++ +F+    +D+VSWNT+I+ +
Sbjct: 424 ALMDFYSRIGKIEISRSIFKTMEEKDIVSWNTMITGY 460



 Score = 94.4 bits (233), Expect = 6e-17
 Identities = 74/252 (29%), Positives = 122/252 (48%), Gaps = 16/252 (6%)
 Frame = +2

Query: 239  WIESLRSQARSNSFREAITTFVEMQAS-GVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
            W   +   A++    EA+  F+EM A  G+ P+     +++ A    + L   + IHG V
Sbjct: 351  WNAMIAGYAQNEFDEEALNLFLEMLAVLGLSPNATTMASIVPACARCKALCDKESIHGYV 410

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMIN---------- 565
            VK+G +     V N L+  Y R G  ++    +F  + ++D VSWN+MI           
Sbjct: 411  VKMGLEGDRY-VQNALMDFYSRIGK-IEISRSIFKTMEEKDIVSWNTMITGYVICGFHNE 468

Query: 566  ALCKYEEW----VLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYS 733
            ALC   E     +   E     G   ++ +S TL+++   C+ L+    L  G+++H Y+
Sbjct: 469  ALCMLHEMTKEKISDAELKSETGRNMLKLNSVTLMTILPGCAALSV---LAKGREIHAYA 525

Query: 734  LR-VDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEAL 910
            +R +        ++L+ MYAK G  D A+ VFE    R++++WN +I A+    R  EAL
Sbjct: 526  IRHLLASDVAVGSALVDMYAKCGCSDIARAVFEEMPMRNVITWNVLIMAYGMHGRGREAL 585

Query: 911  EYFIFMKDEGFK 946
            E F  M  EG +
Sbjct: 586  ELFENMVKEGMR 597


>ref|XP_002299387.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550347073|gb|EEE84192.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 894

 Score =  306 bits (785), Expect = 6e-81
 Identities = 158/272 (58%), Positives = 202/272 (74%), Gaps = 8/272 (2%)
 Frame = +2

Query: 167 QNPSPPLIGKLCEPTSSDI-------RSKHSWIESLRSQARSNSFREAITTFVEMQASGV 325
           Q   PP+     +P SS          S+ SWIESLRS++RSN FREAI+T++EM  SGV
Sbjct: 27  QPTKPPISSSSPKPISSSSPKPISISHSQASWIESLRSRSRSNLFREAISTYIEMIGSGV 86

Query: 326 LPDNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHS-VTVCNTLLHLYGRCGDDVDQ 502
            PDNFAFPAVLKA   +Q+L LGKQIH  V K GY S S VT+ NTL+++YG+CG  +  
Sbjct: 87  SPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGG-LGD 145

Query: 503 VFKVFDRIPQRDQVSWNSMINALCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSN 682
            +KVFDRI +RDQVSWNS+I+ALC++EEW +A++AFR+M +E  EPSSFTLVS+ALACSN
Sbjct: 146 AYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSN 205

Query: 683 LNRHDGLRLGKQVHGYSLRVDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWN 862
           L + DGL LGKQ+HG   R    +TF+NN+LMAMYAKLG++DDAK +   F  RD+V+WN
Sbjct: 206 LRKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWN 265

Query: 863 TVISAFSQSDRFYEALEYFIFMKDEGFKPDGV 958
           ++IS+FSQ++RF EAL +   M  EG KPDGV
Sbjct: 266 SMISSFSQNERFMEALMFLRLMVLEGVKPDGV 297



 Score =  125 bits (314), Expect = 2e-26
 Identities = 81/243 (33%), Positives = 129/243 (53%), Gaps = 7/243 (2%)
 Frame = +2

Query: 224 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLD---LG 394
           R + SW   + +  R   +  AI  F  M   G  P +F   ++  A + L+  D   LG
Sbjct: 156 RDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLG 215

Query: 395 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCG--DDVDQVFKVFDRIPQRDQVSWNSMINA 568
           KQIHG   + G+        N L+ +Y + G  DD   +  +F+    RD V+WNSMI++
Sbjct: 216 KQIHGCCFRKGH--WRTFSNNALMAMYAKLGRLDDAKSLLVLFE---DRDLVTWNSMISS 270

Query: 569 LCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDD 748
             + E ++ AL   R+M LE ++P   T  SV  ACS+L   D LR GK++H Y+LR DD
Sbjct: 271 FSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHL---DLLRTGKEIHAYALRTDD 327

Query: 749 --RKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFI 922
               +F  ++L+ MY   G+++  ++VF+    R +  WN +I+ ++QS+   +AL  FI
Sbjct: 328 VIENSFVGSALVDMYCNCGQVESGRLVFDGVLDRKIGLWNAMIAGYAQSEHDEKALMLFI 387

Query: 923 FMK 931
            M+
Sbjct: 388 EME 390



 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 73/258 (28%), Positives = 131/258 (50%), Gaps = 22/258 (8%)
 Frame = +2

Query: 239  WIESLRSQARSNSFREAITTFVEMQASGVLPDNFA-FPAVLKAATALQDLDLGKQIHGSV 415
            W   +   A+S    +A+  F+EM+A+  L  N     +++ A    + +   + IHG V
Sbjct: 366  WNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYV 425

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINA--LCKYEEW 589
            +K G +++   + N L+ +Y R GD +    ++FD +  RD VSWN++I +  +C     
Sbjct: 426  IKRGLETNRY-LQNALIDMYSRMGD-IKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSD 483

Query: 590  VLALEAFRIMGLERIE------------------PSSFTLVSVALACSNLNRHDGLRLGK 715
             L L    +  ++RIE                  P+S TL++V   C++L+    L  GK
Sbjct: 484  ALLL----LHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLS---ALAKGK 536

Query: 716  QVHGYSLR-VDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSD 892
            ++H Y++R +   +    ++L+ MYAK G ++ A+ VF+    R++++WN +I A+    
Sbjct: 537  EIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHG 596

Query: 893  RFYEALEYFIFMKDEGFK 946
            +  E+LE F  M  EG K
Sbjct: 597  KGKESLELFEDMVAEGAK 614



 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 67/230 (29%), Positives = 112/230 (48%), Gaps = 5/230 (2%)
 Frame = +2

Query: 236 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
           +W   + S +++  F EA+     M   GV PD   F +VL A + L  L  GK+IH   
Sbjct: 263 TWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYA 322

Query: 416 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWVL 595
           ++      +  V + L+ +Y  CG  V+    VFD +  R    WN+MI    + E    
Sbjct: 323 LRTDDVIENSFVGSALVDMYCNCGQ-VESGRLVFDGVLDRKIGLWNAMIAGYAQSEHDEK 381

Query: 596 ALEAFRIM----GLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD-DRKTF 760
           AL  F  M    GL     +  ++V   + C  ++R +G      +HGY ++   +   +
Sbjct: 382 ALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEG------IHGYVIKRGLETNRY 435

Query: 761 TNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEAL 910
             N+L+ MY+++G I  +K +F+    RD+VSWNT+I+++    R  +AL
Sbjct: 436 LQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDAL 485


>gb|ESW10852.1| hypothetical protein PHAVU_009G243400g [Phaseolus vulgaris]
          Length = 882

 Score =  285 bits (728), Expect = 2e-74
 Identities = 146/252 (57%), Positives = 189/252 (75%), Gaps = 1/252 (0%)
 Frame = +2

Query: 206 PTSS-DIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQD 382
           PT++ + RS   WI+ LRSQ +S+SFR+AI T+  M A+   PDNFAFPAVLKAATA+ D
Sbjct: 36  PTAAVERRSPSQWIDLLRSQTQSSSFRDAIATYAAMLAAAAAPDNFAFPAVLKAATAVHD 95

Query: 383 LDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMI 562
           L LGKQ+H  V K G  + SV V NTLL++YG+CGD +    ++FD IP+RD VSWNSMI
Sbjct: 96  LSLGKQLHAHVFKFG-QAPSVAVANTLLNMYGKCGD-LAAARRLFDEIPERDHVSWNSMI 153

Query: 563 NALCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRV 742
             LC++EEW L+L  FR+M  E +EPSSFTLVSVA ACS L    G RLGKQVH ++LR 
Sbjct: 154 ATLCRFEEWELSLHLFRLMLSENVEPSSFTLVSVAHACSYLR--GGTRLGKQVHAFTLRN 211

Query: 743 DDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFI 922
           DD +T+TNN+L++MYA+LG+++DAK +F+ F  +D+VSWNTVIS+ SQ+DRF EAL Y  
Sbjct: 212 DDLRTYTNNALVSMYARLGRVNDAKALFDVFDGKDIVSWNTVISSLSQNDRFEEALMYMY 271

Query: 923 FMKDEGFKPDGV 958
            M  +G +PDGV
Sbjct: 272 LMIVDGVRPDGV 283



 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 69/243 (28%), Positives = 122/243 (50%), Gaps = 5/243 (2%)
 Frame = +2

Query: 224 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQD-LDLGKQ 400
           R   SW   + +  R   +  ++  F  M +  V P +F   +V  A + L+    LGKQ
Sbjct: 144 RDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVEPSSFTLVSVAHACSYLRGGTRLGKQ 203

Query: 401 IHGSVVKLGYDSHSVTVCNTLLHLYGRCG--DDVDQVFKVFDRIPQRDQVSWNSMINALC 574
           +H   ++   D       N L+ +Y R G  +D   +F VFD    +D VSWN++I++L 
Sbjct: 204 VHAFTLR--NDDLRTYTNNALVSMYARLGRVNDAKALFDVFDG---KDIVSWNTVISSLS 258

Query: 575 KYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDD-- 748
           + + +  AL    +M ++ + P   TL SV  ACS L R   LR+G+++H Y+L+  D  
Sbjct: 259 QNDRFEEALMYMYLMIVDGVRPDGVTLASVLPACSQLER---LRIGREIHCYALKNGDLI 315

Query: 749 RKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFM 928
             +F   +L+ MY    +    ++VF+    + +  WN +++ +++++   +AL  FI M
Sbjct: 316 ENSFVGTALVDMYCNCKQAVKGRLVFDRVWRKTVAVWNAMLAGYARNEFDDQALRLFIEM 375

Query: 929 KDE 937
             E
Sbjct: 376 ISE 378



 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 68/227 (29%), Positives = 114/227 (50%), Gaps = 2/227 (0%)
 Frame = +2

Query: 236 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
           SW   + S ++++ F EA+     M   GV PD     +VL A + L+ L +G++IH   
Sbjct: 249 SWNTVISSLSQNDRFEEALMYMYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYA 308

Query: 416 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWVL 595
           +K G    +  V   L+ +Y  C   V     VFDR+ ++    WN+M+    + E    
Sbjct: 309 LKNGDLIENSFVGTALVDMYCNCKQAVKGRL-VFDRVWRKTVAVWNAMLAGYARNEFDDQ 367

Query: 596 ALEAF-RIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSL-RVDDRKTFTNN 769
           AL  F  ++      P++ TL SV  AC    R +     + +HGY + R   +  +  N
Sbjct: 368 ALRLFIEMISESEFCPNATTLSSVLPACV---RCESFLDKEGIHGYIVKRGFGKDKYVKN 424

Query: 770 SLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEAL 910
           +LM MY+++G+I  +K++F     RD+VSWNT+I+      ++ +AL
Sbjct: 425 ALMDMYSRMGRIQISKMIFGGMGRRDIVSWNTMITGCVVCGQYEDAL 471



 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 76/255 (29%), Positives = 123/255 (48%), Gaps = 21/255 (8%)
 Frame = +2

Query: 239  WIESLRSQARSNSFREAITTFVEM-QASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
            W   L   AR+    +A+  F+EM   S   P+     +VL A    +     + IHG +
Sbjct: 352  WNAMLAGYARNEFDDQALRLFIEMISESEFCPNATTLSSVLPACVRCESFLDKEGIHGYI 411

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFK-VFDRIPQRDQVSWNSMINA--LCKYEE 586
            VK G+      V N L+ +Y R G    Q+ K +F  + +RD VSWN+MI    +C   E
Sbjct: 412  VKRGFGKDKY-VKNALMDMYSRMGRI--QISKMIFGGMGRRDIVSWNTMITGCVVCGQYE 468

Query: 587  WVLAL--EAFRIMGLER--------------IEPSSFTLVSVALACSNLNRHDGLRLGKQ 718
              L L  E  R  G +               ++P+S TL++V   C+ L     L  GK+
Sbjct: 469  DALNLLHEMQRGQGEDGGDTFDDCEDEESLPLKPNSVTLMTVLPGCAALA---ALGKGKE 525

Query: 719  VHGYSLR-VDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDR 895
            +H Y+++ +        ++L+ MYAK G ++ A+IVF+    R++++WN +I A+    +
Sbjct: 526  IHAYAIKEMLAMDVAVGSALVDMYAKCGCLNLARIVFDQMPIRNVITWNVLIMAYGMHGK 585

Query: 896  FYEALEYFIFMKDEG 940
              EAL+ F  M + G
Sbjct: 586  GEEALKLFRRMTEGG 600


>ref|XP_004487896.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like isoform X1 [Cicer arietinum]
           gi|502085351|ref|XP_004487897.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like isoform X2 [Cicer arietinum]
          Length = 872

 Score =  283 bits (725), Expect = 5e-74
 Identities = 143/252 (56%), Positives = 186/252 (73%), Gaps = 2/252 (0%)
 Frame = +2

Query: 209 TSSDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLD 388
           TS++  S  +WI+ LRSQ +S+SF +AI+T+  M  +GV PDNFAFPAVLKA  A QDL+
Sbjct: 25  TSAEPHSPSAWIDRLRSQVQSSSFHQAISTYTNMVTAGVPPDNFAFPAVLKATAATQDLN 84

Query: 389 LGKQIHGSVVKLGY--DSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMI 562
           LGKQIHG V K G    S +  V N+L+++YG+CGD +D   +VFD I  RD VSWNSMI
Sbjct: 85  LGKQIHGHVFKFGQALPSSAAAVANSLVNMYGKCGD-IDDARRVFDEISHRDDVSWNSMI 143

Query: 563 NALCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRV 742
            A C++E+W L++  FR+M LE + P+SFTLVSVA ACSNL   +GL LGKQVH + LR 
Sbjct: 144 AAACRFEKWELSIHLFRLMLLEHVGPTSFTLVSVAHACSNLR--NGLLLGKQVHAFMLRN 201

Query: 743 DDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFI 922
           DD +TFTNN+L+ MYAKLG++ +AK +F+ F  +D+VSWNT+IS+ SQ+DRF EAL Y  
Sbjct: 202 DDWRTFTNNALVTMYAKLGRVFEAKALFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLH 261

Query: 923 FMKDEGFKPDGV 958
           FM   G +PDGV
Sbjct: 262 FMLQSGVRPDGV 273



 Score =  100 bits (249), Expect = 8e-19
 Identities = 72/249 (28%), Positives = 123/249 (49%), Gaps = 4/249 (1%)
 Frame = +2

Query: 224 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQD-LDLGKQ 400
           R   SW   + +  R   +  +I  F  M    V P +F   +V  A + L++ L LGKQ
Sbjct: 134 RDDVSWNSMIAAACRFEKWELSIHLFRLMLLEHVGPTSFTLVSVAHACSNLRNGLLLGKQ 193

Query: 401 IHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKY 580
           +H  +++   D       N L+ +Y + G  V +   +FD    +D VSWN++I++L + 
Sbjct: 194 VHAFMLR--NDDWRTFTNNALVTMYAKLGR-VFEAKALFDVFDDKDLVSWNTIISSLSQN 250

Query: 581 EEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDD--RK 754
           + +  AL     M    + P   TL S   ACS+L     L  GK++H + LR +D    
Sbjct: 251 DRFEEALLYLHFMLQSGVRPDGVTLASALPACSHLEM---LSYGKEIHSFVLRNNDLIEN 307

Query: 755 TFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFMKD 934
           +F  ++L+ MY    + +  +IVF+    + +  WN +I+ + +++  YEA+E F+ M  
Sbjct: 308 SFVGSALVDMYCNCNQPEKGRIVFDGMFRKTVAVWNAMIAGYVRNEFDYEAIELFVEMVF 367

Query: 935 E-GFKPDGV 958
           E G  P+ V
Sbjct: 368 ELGMSPNSV 376



 Score = 94.7 bits (234), Expect = 5e-17
 Identities = 69/227 (30%), Positives = 116/227 (51%), Gaps = 2/227 (0%)
 Frame = +2

Query: 236 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
           SW   + S ++++ F EA+     M  SGV PD     + L A + L+ L  GK+IH  V
Sbjct: 239 SWNTIISSLSQNDRFEEALLYLHFMLQSGVRPDGVTLASALPACSHLEMLSYGKEIHSFV 298

Query: 416 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWVL 595
           ++      +  V + L+ +Y  C    ++   VFD + ++    WN+MI    + E    
Sbjct: 299 LRNNDLIENSFVGSALVDMYCNCNQP-EKGRIVFDGMFRKTVAVWNAMIAGYVRNEFDYE 357

Query: 596 ALEAFRIMGLER-IEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD-DRKTFTNN 769
           A+E F  M  E  + P+S TL SV  AC    R +     + +HG  ++   ++  +  N
Sbjct: 358 AIELFVEMVFELGMSPNSVTLSSVLPACV---RCEAFLDKEGIHGCVVKWGFEKDKYVQN 414

Query: 770 SLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEAL 910
           +LM MY+++G I+ +K +F   + RD+VSWNT+I+ +    R  +AL
Sbjct: 415 ALMDMYSRMGMIEISKSIFGSMSRRDIVSWNTMITGYVVCGRHNDAL 461



 Score = 94.0 bits (232), Expect = 8e-17
 Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 20/256 (7%)
 Frame = +2

Query: 239  WIESLRSQARSNSFREAITTFVEMQAS-GVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
            W   +    R+    EAI  FVEM    G+ P++    +VL A    +     + IHG V
Sbjct: 342  WNAMIAGYVRNEFDYEAIELFVEMVFELGMSPNSVTLSSVLPACVRCEAFLDKEGIHGCV 401

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINA--LC----- 574
            VK G++     V N L+ +Y R G  ++    +F  + +RD VSWN+MI    +C     
Sbjct: 402  VKWGFEKDKY-VQNALMDMYSRMGM-IEISKSIFGSMSRRDIVSWNTMITGYVVCGRHND 459

Query: 575  -----------KYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQV 721
                       + E+ +   + + +     I+P+S TL++V   C+ L     L  GK++
Sbjct: 460  ALNLLHDMQRGQEEDRINTFDDYEVNRSVPIKPNSVTLMTVLPGCAALA---ALGKGKEI 516

Query: 722  HGYSLR-VDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRF 898
            H Y+++ +  +     ++L+ MYAK G ++ ++ VFE  + R++++WN +I A+    + 
Sbjct: 517  HAYAVKQMISKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKG 576

Query: 899  YEALEYFIFMKDEGFK 946
             EAL+ F  M  EG K
Sbjct: 577  EEALKLFRRMVAEGDK 592


>ref|XP_006402877.1| hypothetical protein EUTSA_v10005782mg [Eutrema salsugineum]
           gi|557103976|gb|ESQ44330.1| hypothetical protein
           EUTSA_v10005782mg [Eutrema salsugineum]
          Length = 888

 Score =  279 bits (714), Expect = 1e-72
 Identities = 140/244 (57%), Positives = 180/244 (73%)
 Frame = +2

Query: 224 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQI 403
           RS   WI+SLRS+ RSN  REA+ T+++M   G+ PDNF FPA+LKA   LQD+DLGKQI
Sbjct: 58  RSTEWWIDSLRSKVRSNLLREAVFTYIDMVLLGIKPDNFVFPALLKAVADLQDMDLGKQI 117

Query: 404 HGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYE 583
           H  V K GY   SVTV NTL++ Y +CGD    V+KVFDRI +R+QVSWNSMI++LC +E
Sbjct: 118 HAHVYKFGYGVDSVTVANTLVNFYRKCGD-FGAVYKVFDRISERNQVSWNSMISSLCSFE 176

Query: 584 EWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDDRKTFT 763
           +W +ALEAFR M  E +EPSSFTLVSVA+ACSNL   +GL +GKQVH YSLR  D  +F 
Sbjct: 177 KWEMALEAFRCMLDENVEPSSFTLVSVAIACSNLPIPEGLMMGKQVHAYSLRKGDLNSFI 236

Query: 764 NNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFMKDEGF 943
            N+L+AMY KLGK+  +KI+   F  R++V+WNTV+S+  Q+++F EALEY   M  +G 
Sbjct: 237 INTLVAMYGKLGKLASSKILLGTFEGRNLVTWNTVLSSLCQNEQFLEALEYLREMVLKGV 296

Query: 944 KPDG 955
           +PDG
Sbjct: 297 EPDG 300



 Score =  112 bits (281), Expect = 2e-22
 Identities = 75/242 (30%), Positives = 130/242 (53%), Gaps = 5/242 (2%)
 Frame = +2

Query: 224 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATAL---QDLDLG 394
           R++ SW   + S      +  A+  F  M    V P +F   +V  A + L   + L +G
Sbjct: 160 RNQVSWNSMISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVAIACSNLPIPEGLMMG 219

Query: 395 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 574
           KQ+H   ++ G D +S  + NTL+ +YG+ G        +      R+ V+WN+++++LC
Sbjct: 220 KQVHAYSLRKG-DLNSFII-NTLVAMYGKLGKLASSKI-LLGTFEGRNLVTWNTVLSSLC 276

Query: 575 KYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD--D 748
           + E+++ ALE  R M L+ +EP  FT+ SV   CS+L     LR GK++H Y+L+    D
Sbjct: 277 QNEQFLEALEYLREMVLKGVEPDGFTISSVLPVCSHLEM---LRTGKEMHAYALKNGSLD 333

Query: 749 RKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFM 928
             +F  ++L+ MY    ++  A+ VF+    R +  WN +I+ ++Q++   EAL  FI M
Sbjct: 334 ENSFVGSALVDMYCNCKQVLSARRVFDVIFDRRIGLWNAMIAGYAQNEHDEEALSLFIEM 393

Query: 929 KD 934
           ++
Sbjct: 394 EE 395



 Score =  100 bits (250), Expect = 6e-19
 Identities = 81/258 (31%), Positives = 125/258 (48%), Gaps = 9/258 (3%)
 Frame = +2

Query: 164 IQNPSPPLIGKLCEPTSSDI-------RSKHSWIESLRSQARSNSFREAITTFVEMQASG 322
           I N    + GKL +  SS I       R+  +W   L S  ++  F EA+    EM   G
Sbjct: 236 IINTLVAMYGKLGKLASSKILLGTFEGRNLVTWNTVLSSLCQNEQFLEALEYLREMVLKG 295

Query: 323 VLPDNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQ 502
           V PD F   +VL   + L+ L  GK++H   +K G    +  V + L+ +Y  C   V  
Sbjct: 296 VEPDGFTISSVLPVCSHLEMLRTGKEMHAYALKNGSLDENSFVGSALVDMYCNC-KQVLS 354

Query: 503 VFKVFDRIPQRDQVSWNSMINALCKYEEWVLALEAFRIMG-LERIEPSSFTLVSVALACS 679
             +VFD I  R    WN+MI    + E    AL  F  M     +  ++ T+ S+  AC 
Sbjct: 355 ARRVFDVIFDRRIGLWNAMIAGYAQNEHDEEALSLFIEMEETTGLLANTTTMASIVPACV 414

Query: 680 NLNRHDGLRLGKQVHGYSLRVD-DRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVS 856
              R +     + +HG+ ++   D   F  N+LM MY++LGKID A+++F     RD+V+
Sbjct: 415 ---RSNAFSRKEAIHGFVMKRGLDGDRFVQNALMDMYSRLGKIDIAEMIFCKMEDRDLVT 471

Query: 857 WNTVISAFSQSDRFYEAL 910
           WNT+I+ +  S+   +AL
Sbjct: 472 WNTMITGYVFSECHEDAL 489



 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 66/253 (26%), Positives = 128/253 (50%), Gaps = 13/253 (5%)
 Frame = +2

Query: 239  WIESLRSQARSNSFREAITTFVEMQ-ASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
            W   +   A++    EA++ F+EM+  +G+L +     +++ A          + IHG V
Sbjct: 370  WNAMIAGYAQNEHDEEALSLFIEMEETTGLLANTTTMASIVPACVRSNAFSRKEAIHGFV 429

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCK---YEE 586
            +K G D     V N L+ +Y R G  +D    +F ++  RD V+WN+MI        +E+
Sbjct: 430  MKRGLDGDRF-VQNALMDMYSRLGK-IDIAEMIFCKMEDRDLVTWNTMITGYVFSECHED 487

Query: 587  WVLALEAFRIM------GLERI--EPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRV 742
             +L L   + +      G+ R+  +P+S TL+++  +C+ L+    L  GK++H Y+++ 
Sbjct: 488  ALLVLHKMQNIERKVGEGVSRVGLKPNSITLMTILPSCAALS---ALAKGKEIHAYAIKN 544

Query: 743  D-DRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYF 919
            +        ++L+ MYAK G +  ++ VF+    +++++WN +I A+       +A+E  
Sbjct: 545  NLATDVAVGSALVDMYAKCGCLHMSRKVFDQIPIKNVITWNVIIMAYGMHGNGQDAIELL 604

Query: 920  IFMKDEGFKPDGV 958
              M  +  KP+ V
Sbjct: 605  KMMMVQKVKPNEV 617



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
 Frame = +2

Query: 320 GVLPDNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVD 499
           G+ P++     +L +  AL  L  GK+IH   +K    +  V V + L+ +Y +CG  + 
Sbjct: 510 GLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT-DVAVGSALVDMYAKCGC-LH 567

Query: 500 QVFKVFDRIPQRDQVSWNSMINALCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACS 679
              KVFD+IP ++ ++WN +I A   +     A+E  ++M +++++P+  TL+SV  ACS
Sbjct: 568 MSRKVFDQIPIKNVITWNVIIMAYGMHGNGQDAIELLKMMMVQKVKPNEVTLISVFAACS 627

Query: 680 NLNRHD-GLRL 709
           +    D GL++
Sbjct: 628 HSGMVDEGLKI 638


>ref|XP_006597752.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 880

 Score =  278 bits (711), Expect = 2e-72
 Identities = 145/263 (55%), Positives = 189/263 (71%), Gaps = 1/263 (0%)
 Frame = +2

Query: 173 PSPPLIGKLCEPTSSDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPA 352
           P+PP       PT+ + RS   WI+ LRSQ  S+SFR+AI+T+  M A+   PDNFAFPA
Sbjct: 28  PTPP-------PTTVERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPA 80

Query: 353 VLKAATALQDLDLGKQIHGSVVKLGY-DSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIP 529
           VLKAA A+ DL LGKQIH  V K G+    SV V N+L+++YG+CGD +    +VFD IP
Sbjct: 81  VLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGD-LTAARQVFDDIP 139

Query: 530 QRDQVSWNSMINALCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRL 709
            RD VSWNSMI  LC++EEW L+L  FR+M  E ++P+SFTLVSVA ACS++    G+RL
Sbjct: 140 DRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVR--GGVRL 197

Query: 710 GKQVHGYSLRVDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQS 889
           GKQVH Y+LR  D +T+TNN+L+ MYA+LG+++DAK +F  F  +D+VSWNTVIS+ SQ+
Sbjct: 198 GKQVHAYTLRNGDLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQN 257

Query: 890 DRFYEALEYFIFMKDEGFKPDGV 958
           DRF EAL Y   M  +G +PDGV
Sbjct: 258 DRFEEALMYVYLMIVDGVRPDGV 280



 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 20/261 (7%)
 Frame = +2

Query: 236  SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
            SW   + S ++++ F EA+     M   GV PD     +VL A + L+ L +G++IH   
Sbjct: 246  SWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYA 305

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWVL 595
            ++ G    +  V   L+ +Y  C         VFD + +R    WN+++    + E    
Sbjct: 306  LRNGDLIENSFVGTALVDMYCNCKQPKKGRL-VFDGVVRRTVAVWNALLAGYARNEFDDQ 364

Query: 596  ALEAF-RIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSL-RVDDRKTFTNN 769
            AL  F  ++      P++ T  SV  AC            + +HGY + R   +  +  N
Sbjct: 365  ALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDK---EGIHGYIVKRGFGKDKYVQN 421

Query: 770  SLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEAL------------- 910
            +LM MY+++G+++ +K +F     RD+VSWNT+I+      R+ +AL             
Sbjct: 422  ALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGED 481

Query: 911  --EYFIFMKDEG---FKPDGV 958
              + F+  +D+G   FKP+ V
Sbjct: 482  GSDTFVDYEDDGGVPFKPNSV 502



 Score = 87.0 bits (214), Expect = 9e-15
 Identities = 75/254 (29%), Positives = 115/254 (45%), Gaps = 20/254 (7%)
 Frame = +2

Query: 239  WIESLRSQARSNSFREAITTFVEM-QASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
            W   L   AR+    +A+  FVEM   S   P+   F +VL A    +     + IHG +
Sbjct: 349  WNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYI 408

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWVL 595
            VK G+      V N L+ +Y R G  V+    +F R+ +RD VSWN+MI        +  
Sbjct: 409  VKRGFGKDKY-VQNALMDMYSRMGR-VEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDD 466

Query: 596  ALEAFRIM------------------GLERIEPSSFTLVSVALACSNLNRHDGLRLGKQV 721
            AL     M                  G    +P+S TL++V   C+ L     L  GK++
Sbjct: 467  ALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALA---ALGKGKEI 523

Query: 722  HGYSLRVD-DRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRF 898
            H Y+++          ++L+ MYAK G ++ A  VF+    R++++WN +I A+    + 
Sbjct: 524  HAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKG 583

Query: 899  YEALEYFIFMKDEG 940
             EALE F  M   G
Sbjct: 584  EEALELFRIMTAGG 597


>ref|XP_006290586.1| hypothetical protein CARUB_v10016675mg [Capsella rubella]
           gi|482559293|gb|EOA23484.1| hypothetical protein
           CARUB_v10016675mg [Capsella rubella]
          Length = 882

 Score =  277 bits (709), Expect = 4e-72
 Identities = 139/247 (56%), Positives = 182/247 (73%)
 Frame = +2

Query: 215 SDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLG 394
           S  RS   WI+SLRS+ R++  REA+ T+++M   G+ PD FAFPA+LKA   LQD+DLG
Sbjct: 49  SQSRSPEWWIDSLRSKVRASLLREAVLTYIDMIVLGIKPDKFAFPALLKAVADLQDMDLG 108

Query: 395 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 574
           KQIH  V K GY   SVTV NTL++LY +CGD    V+KVFDRI +R+QVSWNS+I++LC
Sbjct: 109 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGD-FGAVYKVFDRISERNQVSWNSLISSLC 167

Query: 575 KYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDDRK 754
            +E+W +ALEAFR M  E +EPSSFTLVSVALACSN+   +GLRLGKQVH YSLR  +  
Sbjct: 168 SFEKWEMALEAFRCMLDENVEPSSFTLVSVALACSNVPMPEGLRLGKQVHAYSLRKGELN 227

Query: 755 TFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFMKD 934
           +F  N+L+AMY KLGK+  +K +   F  RD+V+WNT++S+  Q+++F EALEY   M  
Sbjct: 228 SFIINTLVAMYGKLGKLASSKSLLGSFEGRDLVTWNTLLSSLCQNEQFLEALEYLREMVL 287

Query: 935 EGFKPDG 955
           +G +PDG
Sbjct: 288 KGVEPDG 294



 Score =  112 bits (280), Expect = 2e-22
 Identities = 74/241 (30%), Positives = 128/241 (53%), Gaps = 5/241 (2%)
 Frame = +2

Query: 224 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATAL---QDLDLG 394
           R++ SW   + S      +  A+  F  M    V P +F   +V  A + +   + L LG
Sbjct: 154 RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVALACSNVPMPEGLRLG 213

Query: 395 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 574
           KQ+H   ++ G    +  + NTL+ +YG+ G        +      RD V+WN+++++LC
Sbjct: 214 KQVHAYSLRKG--ELNSFIINTLVAMYGKLGKLASSK-SLLGSFEGRDLVTWNTLLSSLC 270

Query: 575 KYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD--D 748
           + E+++ ALE  R M L+ +EP  FT+ SV   CS+L   + LR GK++H Y+L+    D
Sbjct: 271 QNEQFLEALEYLREMVLKGVEPDGFTISSVLPVCSHL---EMLRTGKELHAYALKNGSLD 327

Query: 749 RKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFM 928
             +F  ++L+ MY    ++  A+ VF+    R +  WN +I+ ++Q++   EAL  FI M
Sbjct: 328 ENSFVGSALVDMYCNCKRVLSARRVFDGMFDRKIGLWNAMITGYAQNEHDVEALLLFIEM 387

Query: 929 K 931
           +
Sbjct: 388 E 388



 Score =  105 bits (262), Expect = 3e-20
 Identities = 75/227 (33%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
 Frame = +2

Query: 236 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
           +W   L S  ++  F EA+    EM   GV PD F   +VL   + L+ L  GK++H   
Sbjct: 261 TWNTLLSSLCQNEQFLEALEYLREMVLKGVEPDGFTISSVLPVCSHLEMLRTGKELHAYA 320

Query: 416 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWVL 595
           +K G    +  V + L+ +Y  C   V    +VFD +  R    WN+MI    + E  V 
Sbjct: 321 LKNGSLDENSFVGSALVDMYCNC-KRVLSARRVFDGMFDRKIGLWNAMITGYAQNEHDVE 379

Query: 596 ALEAFRIMGLER-IEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD-DRKTFTNN 769
           AL  F  M     +  ++ T+  V  AC    R D     + +HG+ ++   DR  F  N
Sbjct: 380 ALLLFIEMEQSAGLLANTTTMAGVVPACV---RSDAFSKKEAIHGFVVKRGLDRDRFVKN 436

Query: 770 SLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEAL 910
           +LM MY++LGKID AK +F     RD+V+WNT+I+ +   +R  +AL
Sbjct: 437 ALMDMYSRLGKIDIAKQIFSKMEDRDLVTWNTMITGYVFLERHEDAL 483



 Score =  102 bits (253), Expect = 3e-19
 Identities = 71/255 (27%), Positives = 131/255 (51%), Gaps = 15/255 (5%)
 Frame = +2

Query: 239  WIESLRSQARSNSFREAITTFVEM-QASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
            W   +   A++    EA+  F+EM Q++G+L +      V+ A          + IHG V
Sbjct: 364  WNAMITGYAQNEHDVEALLLFIEMEQSAGLLANTTTMAGVVPACVRSDAFSKKEAIHGFV 423

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINA---LCKYEE 586
            VK G D     V N L+ +Y R G  +D   ++F ++  RD V+WN+MI     L ++E+
Sbjct: 424  VKRGLDRDRF-VKNALMDMYSRLGK-IDIAKQIFSKMEDRDLVTWNTMITGYVFLERHED 481

Query: 587  WVLALEAFRIMGLER----------IEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSL 736
             +L L   ++  LER          ++P+S TL+++  +C+ L+    L  GK++H Y++
Sbjct: 482  ALLVLH--KMQNLERKASEGAIRVGLKPNSITLMTILPSCAALS---ALAKGKEIHAYAI 536

Query: 737  RVD-DRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALE 913
            + +        ++++ MYAK G +  ++ VF+    R++++WN +I A+       +A++
Sbjct: 537  KNNLATDVAVGSAIVDMYAKCGCLHMSRKVFDQIPFRNVITWNVIIMAYGMHGNGQDAID 596

Query: 914  YFIFMKDEGFKPDGV 958
                M  +G KP+ V
Sbjct: 597  LLRMMMVQGAKPNEV 611



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
 Frame = +2

Query: 320 GVLPDNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVD 499
           G+ P++     +L +  AL  L  GK+IH   +K    +  V V + ++ +Y +CG  + 
Sbjct: 504 GLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT-DVAVGSAIVDMYAKCGC-LH 561

Query: 500 QVFKVFDRIPQRDQVSWNSMINALCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACS 679
              KVFD+IP R+ ++WN +I A   +     A++  R+M ++  +P+  T +SV  ACS
Sbjct: 562 MSRKVFDQIPFRNVITWNVIIMAYGMHGNGQDAIDLLRMMMVQGAKPNEVTFISVFAACS 621

Query: 680 NLNRHD-GLRL 709
           +    D GLR+
Sbjct: 622 HSGMVDEGLRI 632


>ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata] gi|297323990|gb|EFH54411.1| hypothetical protein
           ARALYDRAFT_486188 [Arabidopsis lyrata subsp. lyrata]
          Length = 886

 Score =  276 bits (706), Expect = 8e-72
 Identities = 138/247 (55%), Positives = 179/247 (72%)
 Frame = +2

Query: 215 SDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLG 394
           S   S   WI+ LRS+ RSN  REA+ T+++M   G+ PDNFAFPA+LKA   LQD+DLG
Sbjct: 53  SQSHSPEWWIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLG 112

Query: 395 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 574
           KQIH  V K GY   SVTV NTL++LY +CGD    V+KVFDRI +R+QVSWNS+I++LC
Sbjct: 113 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGD-FGAVYKVFDRISERNQVSWNSLISSLC 171

Query: 575 KYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDDRK 754
            +E+W +ALEAFR M  E +EPSSFTLVSVALACSN    +GL +GKQVH Y LR  +  
Sbjct: 172 SFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELN 231

Query: 755 TFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFMKD 934
           +F  N+L+AMY K+GK+  +K++   F  RD+V+WNTV+S+  Q+++F EALEY   M  
Sbjct: 232 SFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVL 291

Query: 935 EGFKPDG 955
           EG +PDG
Sbjct: 292 EGVEPDG 298



 Score =  107 bits (268), Expect = 5e-21
 Identities = 74/242 (30%), Positives = 126/242 (52%), Gaps = 5/242 (2%)
 Frame = +2

Query: 224 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATAL---QDLDLG 394
           R++ SW   + S      +  A+  F  M    V P +F   +V  A +     + L +G
Sbjct: 158 RNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMG 217

Query: 395 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 574
           KQ+H   ++ G    +  + NTL+ +YG+ G        +      RD V+WN+++++LC
Sbjct: 218 KQVHAYGLRKG--ELNSFIINTLVAMYGKMGKLASSKV-LLGSFEGRDLVTWNTVLSSLC 274

Query: 575 KYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD--D 748
           + E+++ ALE  R M LE +EP  FT+ SV  ACS+L     LR GK++H Y+L+    D
Sbjct: 275 QNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEM---LRTGKELHAYALKNGSLD 331

Query: 749 RKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFM 928
             +F  ++L+ MY    ++     VF+    R +  WN +I+ ++Q++   EAL  FI M
Sbjct: 332 ENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEM 391

Query: 929 KD 934
           ++
Sbjct: 392 EE 393



 Score =  105 bits (262), Expect = 3e-20
 Identities = 85/261 (32%), Positives = 126/261 (48%), Gaps = 12/261 (4%)
 Frame = +2

Query: 164 IQNPSPPLIGKLCEPTSSDI-------RSKHSWIESLRSQARSNSFREAITTFVEMQASG 322
           I N    + GK+ +  SS +       R   +W   L S  ++  F EA+    EM   G
Sbjct: 234 IINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEG 293

Query: 323 VLPDNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQ 502
           V PD F   +VL A + L+ L  GK++H   +K G    +  V + L+ +Y  C   V  
Sbjct: 294 VEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC-KQVLS 352

Query: 503 VFKVFDRIPQRDQVSWNSMINALCK--YEEWVLAL--EAFRIMGLERIEPSSFTLVSVAL 670
             +VFD +  R    WN+MI    +  Y+E  L L  E     GL     +S T+  V  
Sbjct: 353 GCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLA---NSTTMAGVVP 409

Query: 671 ACSNLNRHDGLRLGKQVHGYSLRVD-DRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRD 847
           AC    R       + +HG+ ++   DR  F  N+LM MY++LGKID AK +F     RD
Sbjct: 410 ACV---RSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRD 466

Query: 848 MVSWNTVISAFSQSDRFYEAL 910
           +V+WNT+I+ +  S+R  +AL
Sbjct: 467 LVTWNTIITGYVFSERHEDAL 487



 Score =  100 bits (248), Expect = 1e-18
 Identities = 69/253 (27%), Positives = 130/253 (51%), Gaps = 13/253 (5%)
 Frame = +2

Query: 239  WIESLRSQARSNSFREAITTFVEMQAS-GVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
            W   +   A++    EA+  F+EM+ S G+L ++     V+ A          + IHG V
Sbjct: 368  WNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFV 427

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC---KYEE 586
            VK G D     V N L+ +Y R G  +D   ++F ++  RD V+WN++I       ++E+
Sbjct: 428  VKRGLDRDRF-VQNALMDMYSRLGK-IDIAKRIFGKMEDRDLVTWNTIITGYVFSERHED 485

Query: 587  WVLALEAFRIM---GLER-----IEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRV 742
             +L L   +I+     ER     ++P+S TL+++  +C+ L+    L  GK++H Y+++ 
Sbjct: 486  ALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALS---ALAKGKEIHAYAIKN 542

Query: 743  D-DRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYF 919
            +        ++L+ MYAK G +  ++ VF+    R++++WN ++ A+       +A++  
Sbjct: 543  NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDML 602

Query: 920  IFMKDEGFKPDGV 958
              M  +G KP+ V
Sbjct: 603  RMMMVQGVKPNEV 615



 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 38/128 (29%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
 Frame = +2

Query: 329 PDNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVF 508
           P++     +L +  AL  L  GK+IH   +K    +  V V + L+ +Y +CG  +    
Sbjct: 511 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT-DVAVGSALVDMYAKCGC-LQMSR 568

Query: 509 KVFDRIPQRDQVSWNSMINALCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLN 688
           KVFD+IP R+ ++WN ++ A   +     A++  R+M ++ ++P+  T +SV  ACS+  
Sbjct: 569 KVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSG 628

Query: 689 R-HDGLRL 709
             ++GL++
Sbjct: 629 MVNEGLKI 636


>ref|NP_191302.2| protein ORGANELLE TRANSCRIPT PROCESSING 84 [Arabidopsis thaliana]
           gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
           gi|332646133|gb|AEE79654.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  271 bits (694), Expect = 2e-70
 Identities = 136/246 (55%), Positives = 177/246 (71%)
 Frame = +2

Query: 215 SDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLG 394
           S  RS   WI+ LRS+ RSN  REA+ T+V+M   G+ PDN+AFPA+LKA   LQD++LG
Sbjct: 57  SQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELG 116

Query: 395 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 574
           KQIH  V K GY   SVTV NTL++LY +CGD    V+KVFDRI +R+QVSWNS+I++LC
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGD-FGAVYKVFDRISERNQVSWNSLISSLC 175

Query: 575 KYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDDRK 754
            +E+W +ALEAFR M  E +EPSSFTLVSV  ACSNL   +GL +GKQVH Y LR  +  
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELN 235

Query: 755 TFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFMKD 934
           +F  N+L+AMY KLGK+  +K++   F  RD+V+WNTV+S+  Q+++  EALEY   M  
Sbjct: 236 SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL 295

Query: 935 EGFKPD 952
           EG +PD
Sbjct: 296 EGVEPD 301



 Score =  113 bits (283), Expect = 9e-23
 Identities = 76/242 (31%), Positives = 129/242 (53%), Gaps = 5/242 (2%)
 Frame = +2

Query: 224 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATAL---QDLDLG 394
           R++ SW   + S      +  A+  F  M    V P +F   +V+ A + L   + L +G
Sbjct: 162 RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 221

Query: 395 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 574
           KQ+H   ++ G    +  + NTL+ +YG+ G        +      RD V+WN+++++LC
Sbjct: 222 KQVHAYGLRKG--ELNSFIINTLVAMYGKLGKLASSKV-LLGSFGGRDLVTWNTVLSSLC 278

Query: 575 KYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD--D 748
           + E+ + ALE  R M LE +EP  FT+ SV  ACS+L   + LR GK++H Y+L+    D
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL---EMLRTGKELHAYALKNGSLD 335

Query: 749 RKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFM 928
             +F  ++L+ MY    ++   + VF+    R +  WN +I+ +SQ++   EAL  FI M
Sbjct: 336 ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM 395

Query: 929 KD 934
           ++
Sbjct: 396 EE 397



 Score =  101 bits (252), Expect = 4e-19
 Identities = 70/255 (27%), Positives = 130/255 (50%), Gaps = 15/255 (5%)
 Frame = +2

Query: 239  WIESLRSQARSNSFREAITTFVEMQAS-GVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
            W   +   +++   +EA+  F+ M+ S G+L ++     V+ A          + IHG V
Sbjct: 372  WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC---KYEE 586
            VK G D     V NTL+ +Y R G  +D   ++F ++  RD V+WN+MI        +E+
Sbjct: 432  VKRGLDRDRF-VQNTLMDMYSRLGK-IDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 489

Query: 587  WVLALEAFRIMGLER----------IEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSL 736
             +L L   ++  LER          ++P+S TL+++  +C+ L+    L  GK++H Y++
Sbjct: 490  ALLLLH--KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALS---ALAKGKEIHAYAI 544

Query: 737  RVD-DRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALE 913
            + +        ++L+ MYAK G +  ++ VF+    +++++WN +I A+       EA++
Sbjct: 545  KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID 604

Query: 914  YFIFMKDEGFKPDGV 958
                M  +G KP+ V
Sbjct: 605  LLRMMMVQGVKPNEV 619



 Score =  100 bits (248), Expect = 1e-18
 Identities = 82/260 (31%), Positives = 124/260 (47%), Gaps = 11/260 (4%)
 Frame = +2

Query: 164 IQNPSPPLIGKLCEPTSSDI-------RSKHSWIESLRSQARSNSFREAITTFVEMQASG 322
           I N    + GKL +  SS +       R   +W   L S  ++    EA+    EM   G
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297

Query: 323 VLPDNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQ 502
           V PD F   +VL A + L+ L  GK++H   +K G    +  V + L+ +Y  C   V  
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC-KQVLS 356

Query: 503 VFKVFDRIPQRDQVSWNSMINALCKYEEWVLALEAFRIMGLER---IEPSSFTLVSVALA 673
             +VFD +  R    WN+MI    + E    AL  F  +G+E    +  +S T+  V  A
Sbjct: 357 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF--IGMEESAGLLANSTTMAGVVPA 414

Query: 674 CSNLNRHDGLRLGKQVHGYSLRVD-DRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDM 850
           C    R       + +HG+ ++   DR  F  N+LM MY++LGKID A  +F     RD+
Sbjct: 415 CV---RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL 471

Query: 851 VSWNTVISAFSQSDRFYEAL 910
           V+WNT+I+ +  S+   +AL
Sbjct: 472 VTWNTMITGYVFSEHHEDAL 491



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
 Frame = +2

Query: 329 PDNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVF 508
           P++     +L +  AL  L  GK+IH   +K    +  V V + L+ +Y +CG  +    
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT-DVAVGSALVDMYAKCGC-LQMSR 572

Query: 509 KVFDRIPQRDQVSWNSMINALCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLN 688
           KVFD+IPQ++ ++WN +I A   +     A++  R+M ++ ++P+  T +SV  ACS+  
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632

Query: 689 RHD-GLRL 709
             D GLR+
Sbjct: 633 MVDEGLRI 640


>gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  271 bits (694), Expect = 2e-70
 Identities = 136/246 (55%), Positives = 177/246 (71%)
 Frame = +2

Query: 215 SDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLG 394
           S  RS   WI+ LRS+ RSN  REA+ T+V+M   G+ PDN+AFPA+LKA   LQD++LG
Sbjct: 57  SQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELG 116

Query: 395 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 574
           KQIH  V K GY   SVTV NTL++LY +CGD    V+KVFDRI +R+QVSWNS+I++LC
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGD-FGAVYKVFDRISERNQVSWNSLISSLC 175

Query: 575 KYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDDRK 754
            +E+W +ALEAFR M  E +EPSSFTLVSV  ACSNL   +GL +GKQVH Y LR  +  
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELN 235

Query: 755 TFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFMKD 934
           +F  N+L+AMY KLGK+  +K++   F  RD+V+WNTV+S+  Q+++  EALEY   M  
Sbjct: 236 SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL 295

Query: 935 EGFKPD 952
           EG +PD
Sbjct: 296 EGVEPD 301



 Score =  113 bits (283), Expect = 9e-23
 Identities = 76/242 (31%), Positives = 129/242 (53%), Gaps = 5/242 (2%)
 Frame = +2

Query: 224 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATAL---QDLDLG 394
           R++ SW   + S      +  A+  F  M    V P +F   +V+ A + L   + L +G
Sbjct: 162 RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 221

Query: 395 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 574
           KQ+H   ++ G    +  + NTL+ +YG+ G        +      RD V+WN+++++LC
Sbjct: 222 KQVHAYGLRKG--ELNSFIINTLVAMYGKLGKLASSKV-LLGSFGGRDLVTWNTVLSSLC 278

Query: 575 KYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD--D 748
           + E+ + ALE  R M LE +EP  FT+ SV  ACS+L   + LR GK++H Y+L+    D
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL---EMLRTGKELHAYALKNGSLD 335

Query: 749 RKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFM 928
             +F  ++L+ MY    ++   + VF+    R +  WN +I+ +SQ++   EAL  FI M
Sbjct: 336 ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM 395

Query: 929 KD 934
           ++
Sbjct: 396 EE 397



 Score =  101 bits (252), Expect = 4e-19
 Identities = 70/255 (27%), Positives = 130/255 (50%), Gaps = 15/255 (5%)
 Frame = +2

Query: 239  WIESLRSQARSNSFREAITTFVEMQAS-GVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
            W   +   +++   +EA+  F+ M+ S G+L ++     V+ A          + IHG V
Sbjct: 372  WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC---KYEE 586
            VK G D     V NTL+ +Y R G  +D   ++F ++  RD V+WN+MI        +E+
Sbjct: 432  VKRGLDRDRF-VQNTLMDMYSRLGK-IDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 489

Query: 587  WVLALEAFRIMGLER----------IEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSL 736
             +L L   ++  LER          ++P+S TL+++  +C+ L+    L  GK++H Y++
Sbjct: 490  ALLLLH--KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALS---ALAKGKEIHAYAI 544

Query: 737  RVD-DRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALE 913
            + +        ++L+ MYAK G +  ++ VF+    +++++WN +I A+       EA++
Sbjct: 545  KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID 604

Query: 914  YFIFMKDEGFKPDGV 958
                M  +G KP+ V
Sbjct: 605  LLRMMMVQGVKPNEV 619



 Score =  100 bits (248), Expect = 1e-18
 Identities = 82/260 (31%), Positives = 124/260 (47%), Gaps = 11/260 (4%)
 Frame = +2

Query: 164 IQNPSPPLIGKLCEPTSSDI-------RSKHSWIESLRSQARSNSFREAITTFVEMQASG 322
           I N    + GKL +  SS +       R   +W   L S  ++    EA+    EM   G
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297

Query: 323 VLPDNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQ 502
           V PD F   +VL A + L+ L  GK++H   +K G    +  V + L+ +Y  C   V  
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC-KQVLS 356

Query: 503 VFKVFDRIPQRDQVSWNSMINALCKYEEWVLALEAFRIMGLER---IEPSSFTLVSVALA 673
             +VFD +  R    WN+MI    + E    AL  F  +G+E    +  +S T+  V  A
Sbjct: 357 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF--IGMEESAGLLANSTTMAGVVPA 414

Query: 674 CSNLNRHDGLRLGKQVHGYSLRVD-DRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDM 850
           C    R       + +HG+ ++   DR  F  N+LM MY++LGKID A  +F     RD+
Sbjct: 415 CV---RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL 471

Query: 851 VSWNTVISAFSQSDRFYEAL 910
           V+WNT+I+ +  S+   +AL
Sbjct: 472 VTWNTMITGYVFSEHHEDAL 491



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
 Frame = +2

Query: 329 PDNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVF 508
           P++     +L +  AL  L  GK+IH   +K    +  V V + L+ +Y +CG  +    
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT-DVAVGSALVDMYAKCGC-LQMSR 572

Query: 509 KVFDRIPQRDQVSWNSMINALCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLN 688
           KVFD+IPQ++ ++WN +I A   +     A++  R+M ++ ++P+  T +SV  ACS+  
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632

Query: 689 RHD-GLRL 709
             D GLR+
Sbjct: 633 MVDEGLRI 640


>ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355483916|gb|AES65119.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 874

 Score =  264 bits (674), Expect = 4e-68
 Identities = 136/250 (54%), Positives = 180/250 (72%), Gaps = 1/250 (0%)
 Frame = +2

Query: 212 SSDIRSKHSWIESLRSQARSNS-FREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLD 388
           +++ R    W+  LRSQ +S+S F +AI+T+  M  +GV PDNFAFPAVLKA   +QDL+
Sbjct: 43  AAEPRLPSEWVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLN 102

Query: 389 LGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINA 568
           LGKQ+H  V K G  +    V N+L+++YG+CGD +D   +VFD I  RD VSWNSMINA
Sbjct: 103 LGKQLHAHVFKFG-QALPTAVPNSLVNMYGKCGD-IDAARRVFDEITNRDDVSWNSMINA 160

Query: 569 LCKYEEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDD 748
            C++EEW LA+  FR+M LE + P+SFTLVSVA ACSNL   +GL LGKQVH + LR  D
Sbjct: 161 ACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLI--NGLLLGKQVHAFVLRNGD 218

Query: 749 RKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFM 928
            +TFTNN+L+ MYAKLG++ +AK +F+ F  +D+VSWNT+IS+ SQ+DRF EAL Y   M
Sbjct: 219 WRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVM 278

Query: 929 KDEGFKPDGV 958
              G +P+GV
Sbjct: 279 LQSGVRPNGV 288



 Score =  101 bits (251), Expect = 5e-19
 Identities = 75/249 (30%), Positives = 126/249 (50%), Gaps = 4/249 (1%)
 Frame = +2

Query: 224 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATAL-QDLDLGKQ 400
           R   SW   + +  R   +  A+  F  M    V P +F   +V  A + L   L LGKQ
Sbjct: 149 RDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQ 208

Query: 401 IHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKY 580
           +H  V++ G D  + T  N L+ +Y + G  V +   +FD    +D VSWN++I++L + 
Sbjct: 209 VHAFVLRNG-DWRTFTN-NALVTMYAKLGR-VYEAKTLFDVFDDKDLVSWNTIISSLSQN 265

Query: 581 EEWVLALEAFRIMGLERIEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVDD--RK 754
           + +  AL    +M    + P+  TL SV  ACS+L   + L  GK++H + L  +D    
Sbjct: 266 DRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHL---EMLGCGKEIHAFVLMNNDLIEN 322

Query: 755 TFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEALEYFIFMKD 934
           +F   +L+ MY    + +  ++VF+    R +  WN +I+ + +++  YEA+E F+ M  
Sbjct: 323 SFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVF 382

Query: 935 E-GFKPDGV 958
           E G  P+ V
Sbjct: 383 ELGLSPNSV 391



 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 73/254 (28%), Positives = 123/254 (48%), Gaps = 20/254 (7%)
 Frame = +2

Query: 239  WIESLRSQARSNSFREAITTFVEMQAS-GVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
            W   +    R+    EAI  FVEM    G+ P++    +VL A    +     + IH  V
Sbjct: 357  WNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCV 416

Query: 416  VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINA--LCKYEEW 589
            VK G++     V N L+ +Y R G  ++    +F  + ++D VSWN+MI    +C   + 
Sbjct: 417  VKWGFEKDKY-VQNALMDMYSRMGR-IEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDD 474

Query: 590  VLAL--------EAFRIMGLERIE--------PSSFTLVSVALACSNLNRHDGLRLGKQV 721
             L L           RI   +  E        P+S TL++V   C+ L     L  GK++
Sbjct: 475  ALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALA---ALGKGKEI 531

Query: 722  HGYSLR-VDDRKTFTNNSLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRF 898
            H Y+++ +  +     ++L+ MYAK G ++ ++ VFE  + R++++WN +I A+    + 
Sbjct: 532  HAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKG 591

Query: 899  YEALEYFIFMKDEG 940
             EAL+ F  M +EG
Sbjct: 592  EEALKLFRRMVEEG 605



 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 68/227 (29%), Positives = 114/227 (50%), Gaps = 2/227 (0%)
 Frame = +2

Query: 236 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 415
           SW   + S ++++ F EA+     M  SGV P+     +VL A + L+ L  GK+IH  V
Sbjct: 254 SWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFV 313

Query: 416 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWVL 595
           +       +  V   L+ +Y  C    ++   VFD + +R    WN+MI    + E    
Sbjct: 314 LMNNDLIENSFVGCALVDMYCNCKQP-EKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYE 372

Query: 596 ALEAFRIMGLER-IEPSSFTLVSVALACSNLNRHDGLRLGKQVHGYSLRVD-DRKTFTNN 769
           A+E F  M  E  + P+S TL SV  AC    R +     + +H   ++   ++  +  N
Sbjct: 373 AIELFVEMVFELGLSPNSVTLSSVLPACV---RCESFLDKEGIHSCVVKWGFEKDKYVQN 429

Query: 770 SLMAMYAKLGKIDDAKIVFECFAHRDMVSWNTVISAFSQSDRFYEAL 910
           +LM MY+++G+I+ A+ +F     +D+VSWNT+I+ +    R  +AL
Sbjct: 430 ALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDAL 476