BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00022042
         (372 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...    75   9e-12
gb|AAD17357.1| contains similarity to retrovirus-related polypro...    75   1e-11
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]          75   1e-11
dbj|BAA22288.1| polyprotein [Oryza australiensis]                      73   4e-11
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...    70   2e-10
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]      70   2e-10
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...    70   3e-10
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]      70   3e-10
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]    69   5e-10
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...    66   4e-09
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-...    65   7e-09
emb|CAN63912.1| hypothetical protein VITISV_044222 [Vitis vinifera]    64   9e-09
emb|CBI20118.3| unnamed protein product [Vitis vinifera]               61   1e-08
emb|CAN67912.1| hypothetical protein VITISV_004101 [Vitis vinifera]    64   2e-08
gb|EXB35423.1| Retrovirus-related Pol polyprotein from transposo...    64   3e-08
ref|XP_006369910.1| hypothetical protein POPTR_0001s34915g [Popu...    62   6e-08
emb|CAN83369.1| hypothetical protein VITISV_011463 [Vitis vinifera]    57   7e-08
emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group]         57   9e-08
emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group]         57   9e-08
gb|ABF96044.1| transposon protein, putative, unclassified [Oryza...    57   9e-08

>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 40/76 (52%), Positives = 54/76 (71%)
 Frame = -2

Query: 371 RSRKLDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLD 192
           ++R++ R EM LR+GN A+VAAL+  T+ L L +GF + LNNC YVP + RNIIS   L 
Sbjct: 409 KNRRVARGEMDLRVGNKAKVAALSAETLPLVLPSGFIMELNNCYYVPAMSRNIISASCLM 468

Query: 191 RECFKFVIENGTCSIF 144
            E +KF+IE+  CSIF
Sbjct: 469 TEGYKFIIEDHGCSIF 484


>gb|AAD17357.1| contains similarity to retrovirus-related polyproteins [Arabidopsis
           thaliana] gi|7267382|emb|CAB77943.1| putative transposon
           protein [Arabidopsis thaliana]
          Length = 769

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 44/102 (43%), Positives = 58/102 (56%)
 Frame = -2

Query: 359 LDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLDRECF 180
           ++  ++ LRM NGARV+ L +GT  LS  +G  L L NC YV  I +NIISV  LD E F
Sbjct: 82  MEEGQVDLRMANGARVSTLVVGTYSLSFPSGMVLELKNCYYVHAINKNIISVSCLDMEGF 141

Query: 179 KFVIENGTCSIFKDYALIYSGYLTNCLYTVTPHNPISHNSTK 54
            F+I+N  CS  ++     S  L N LY +    PI +  TK
Sbjct: 142 HFLIKNKCCSFDRNDMFYGSAPLENELYVLNQSMPIYNIRTK 183


>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
          Length = 923

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 39/94 (41%), Positives = 58/94 (61%)
 Frame = -2

Query: 371 RSRKLDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLD 192
           RSR L R E+ +R+GNGARVA +A+GT+ LSL +G  L LNNC  +P + +N+IS   L 
Sbjct: 280 RSRSLARGEVDIRVGNGARVAVVAVGTMSLSLPSGLVLELNNCYCIPALCKNVISASCLQ 339

Query: 191 RECFKFVIENGTCSIFKDYALIYSGYLTNCLYTV 90
            E + F   +  CS++ +    ++  + N LY V
Sbjct: 340 AEGYGFRSVDNGCSVYYNDIFYFNAPMMNGLYIV 373


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 42/94 (44%), Positives = 54/94 (57%)
 Frame = -2

Query: 371 RSRKLDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLD 192
           RSR L R E+ LR+GNGA VA +A+GTV L L +G  L LNNC  VP + +N+IS   L 
Sbjct: 321 RSRGLRRGEVNLRVGNGASVATVAVGTVPLHLPSGLVLELNNCYCVPTLCQNVISASCLQ 380

Query: 191 RECFKFVIENGTCSIFKDYALIYSGYLTNCLYTV 90
            E + F   N  CSI+      +   L N LY +
Sbjct: 381 AEGYDFRSMNNGCSIYLRDMFYFHAPLVNGLYVL 414


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1142

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 39/94 (41%), Positives = 57/94 (60%)
 Frame = -2

Query: 371 RSRKLDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLD 192
           RSR L R E+ +R+GNGARVAA+A+GT+ LSL +G  L LNNC  +  + +N+IS   L 
Sbjct: 373 RSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSGIVLELNNCYCIRALCKNVISASCLQ 432

Query: 191 RECFKFVIENGTCSIFKDYALIYSGYLTNCLYTV 90
            E + F   +  CS++ +    +   + N LY V
Sbjct: 433 AEGYGFRSVDNGCSVYYNDIFYFHVPMMNGLYIV 466


>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 39/94 (41%), Positives = 57/94 (60%)
 Frame = -2

Query: 371 RSRKLDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLD 192
           RSR L R E+ +R+GNGARVAA+A+GT+ LSL +G  L LNNC  +  + +N+IS   L 
Sbjct: 300 RSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSGIVLELNNCYCIRALCKNVISASCLQ 359

Query: 191 RECFKFVIENGTCSIFKDYALIYSGYLTNCLYTV 90
            E + F   +  CS++ +    +   + N LY V
Sbjct: 360 AEGYGFRSVDNGCSVYYNDIFYFHVPMMNGLYIV 393


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 37/94 (39%), Positives = 55/94 (58%)
 Frame = -2

Query: 371 RSRKLDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLD 192
           RSR L R  + +R+GNG RVA +A+GT+ LSL +G  L LNNC  +P + +N+IS   L 
Sbjct: 413 RSRSLARGRVDIRVGNGERVAVVAVGTMTLSLPSGLVLELNNCYCIPALCKNVISASCLQ 472

Query: 191 RECFKFVIENGTCSIFKDYALIYSGYLTNCLYTV 90
            E + F   +  CS++ +    +   + N LY V
Sbjct: 473 AEGYGFRSMDNGCSVYYNDLFYFHAPMMNGLYIV 506


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 37/94 (39%), Positives = 55/94 (58%)
 Frame = -2

Query: 371 RSRKLDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLD 192
           RSR L R  + +R+GNG RVA +A+GT+ LSL +G  L LNNC  +P + +N+IS   L 
Sbjct: 413 RSRSLARGRVDIRVGNGERVAVVAVGTMTLSLPSGLVLELNNCYCIPALCKNVISASCLQ 472

Query: 191 RECFKFVIENGTCSIFKDYALIYSGYLTNCLYTV 90
            E + F   +  CS++ +    +   + N LY V
Sbjct: 473 AEGYGFRSMDNGCSVYYNDLFYFHAPMMNGLYIV 506


>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
          Length = 961

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 37/95 (38%), Positives = 56/95 (58%)
 Frame = -2

Query: 368 SRKLDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLDR 189
           S+ L+    ++R+G+GARV+A  +GTV LS  N   L L+N  ++PD  RN+ISV  L  
Sbjct: 240 SKDLEEGAFMMRVGSGARVSATTVGTVXLSFANNKYLLLHNVYFIPDFKRNLISVSKLHE 299

Query: 188 ECFKFVIENGTCSIFKDYALIYSGYLTNCLYTVTP 84
           +      +  + SI+K+   I SGY+ N +Y V P
Sbjct: 300 QFIXVSFDIDSVSIYKNGMNICSGYVDNGIYFVKP 334


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 37/94 (39%), Positives = 56/94 (59%)
 Frame = -2

Query: 371 RSRKLDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLD 192
           RSR L R E+ +R+GNGARVAA+A+GT+ LSL +   L LNN   +P + +N+IS   L 
Sbjct: 297 RSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSRLVLELNNYYCIPALCKNVISASCLQ 356

Query: 191 RECFKFVIENGTCSIFKDYALIYSGYLTNCLYTV 90
            E + F   +  CS++ +    +   + + LY V
Sbjct: 357 AEGYGFRSVDNDCSVYYNDIFYFHAPMMSGLYIV 390


>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550379|gb|ABA93176.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 938

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 36/94 (38%), Positives = 54/94 (57%)
 Frame = -2

Query: 371 RSRKLDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLD 192
           RSR L R E+ + +GNGA V A+A+GT+ LSL +G  L LNNC  +  + +N+IS   L 
Sbjct: 206 RSRNLARGEVDIHVGNGASVVAVAVGTMPLSLPSGLVLELNNCYCILALCKNVISASCLQ 265

Query: 191 RECFKFVIENGTCSIFKDYALIYSGYLTNCLYTV 90
            E + F   +  CS++ +    +   + N LY V
Sbjct: 266 AEGYGFRSVDNGCSVYYNDIFYFHAPMMNGLYIV 299


>emb|CAN63912.1| hypothetical protein VITISV_044222 [Vitis vinifera]
          Length = 1100

 Score = 63.5 bits (153), Expect(2) = 9e-09
 Identities = 35/93 (37%), Positives = 55/93 (59%)
 Frame = -2

Query: 368 SRKLDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLDR 189
           S++L + E  + +GNG +V   AIGT++L L+ GF + L + +YVP   RN+ISV  LD 
Sbjct: 196 SKRLSKGERTITLGNGTKVEIEAIGTLHLILDTGFIMDLVDTVYVPVFTRNLISVTRLDS 255

Query: 188 ECFKFVIENGTCSIFKDYALIYSGYLTNCLYTV 90
             ++    N   S+F +  L+ SG L   LY++
Sbjct: 256 YGYELKFGNKEVSLFYNSCLVGSGTLRGNLYSL 288



 Score = 21.6 bits (44), Expect(2) = 9e-09
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 52  KRKLDNHSSLTLWHARL 2
           KR   N +S  LWH RL
Sbjct: 309 KRNRVNENSSILWHKRL 325


>emb|CBI20118.3| unnamed protein product [Vitis vinifera]
          Length = 1354

 Score = 60.8 bits (146), Expect(2) = 1e-08
 Identities = 34/94 (36%), Positives = 50/94 (53%)
 Frame = -2

Query: 368 SRKLDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLDR 189
           +RK    E  L MGN  +V  +A+GT  L LE G  + L N  YVP I RN++S+  LD 
Sbjct: 683 TRKPKESEKFLYMGNRLKVEVVAVGTYRLLLETGHRMDLLNTFYVPSISRNLVSLSKLDA 742

Query: 188 ECFKFVIENGTCSIFKDYALIYSGYLTNCLYTVT 87
             +  +  +G  S+  +   I SG L + LY ++
Sbjct: 743 TGYSVLFSSGQLSLMLNSVTIGSGILCDGLYKIS 776



 Score = 23.5 bits (49), Expect(2) = 1e-08
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 55  NKRKLDNHSSLTLWHARL 2
           +KR L N +S  LWH RL
Sbjct: 794 SKRGLINENSSILWHRRL 811


>emb|CAN67912.1| hypothetical protein VITISV_004101 [Vitis vinifera]
          Length = 1012

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/93 (38%), Positives = 55/93 (59%)
 Frame = -2

Query: 368 SRKLDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLDR 189
           S+KL + E  + +GNG  V   AIG+++L L+ GF + L + +YVP   RN+ISVP LD 
Sbjct: 279 SKKLSKGERTITLGNGIEVEIEAIGSLHLILDIGFIMDLVDTIYVPVFTRNLISVPRLDS 338

Query: 188 ECFKFVIENGTCSIFKDYALIYSGYLTNCLYTV 90
             ++    N   S+F +  L+ SG L   LY++
Sbjct: 339 YGYELKFGNNGVSLFYNSCLVGSGTLHGNLYSL 371


>gb|EXB35423.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis]
          Length = 443

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 35/88 (39%), Positives = 50/88 (56%)
 Frame = -2

Query: 347 EMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLDRECFKFVI 168
           + ++++GNGARV A A+G V L       L LNN  ++PDI RN+IS+  L  + FK   
Sbjct: 232 DYMIKVGNGARVTAKAVGEVRLHFRENKFLVLNNVYFIPDIRRNLISMSKLFEQFFKVYF 291

Query: 167 ENGTCSIFKDYALIYSGYLTNCLYTVTP 84
            N    I ++   IYSG L + LY + P
Sbjct: 292 VNDFVHISRNGLNIYSGRLDDGLYCIKP 319


>ref|XP_006369910.1| hypothetical protein POPTR_0001s34915g [Populus trichocarpa]
           gi|550348894|gb|ERP66479.1| hypothetical protein
           POPTR_0001s34915g [Populus trichocarpa]
          Length = 120

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 33/92 (35%), Positives = 49/92 (53%)
 Frame = -2

Query: 371 RSRKLDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLD 192
           +SR+L + E+ L +GNG +   L + T YL+ + G  L L+NC +V  + RNI+SV  L 
Sbjct: 8   KSRRLCKGEVDLYVGNGTKAVTLTVETYYLTFQIGIILELDNCYFVSILSRNIVSVSFLA 67

Query: 191 RECFKFVIENGTCSIFKDYALIYSGYLTNCLY 96
               KF++    CS + D      G   N LY
Sbjct: 68  LNGLKFIMNGKCCSFYNDNVYYGYGIYMNSLY 99


>emb|CAN83369.1| hypothetical protein VITISV_011463 [Vitis vinifera]
          Length = 1156

 Score = 56.6 bits (135), Expect(2) = 7e-08
 Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
 Frame = -2

Query: 371 RSRKLDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLD 192
           RSR     E  + +GNG +VA  AIG   L L++G  L L     VP   RN+IS+  LD
Sbjct: 279 RSRMSTDDERYIYVGNGNKVAVKAIGLFRLQLDSGCTLDLEETFVVPSFRRNLISISCLD 338

Query: 191 RECFKFVIENGTCSIFKDYALIYSGYLTNCLYTV----TPHNPISHNS 60
           +  +     NG  S++ +  +I +G LT+ LY +    T  N   H+S
Sbjct: 339 KFGYCCSFGNGMVSLYPNSKVIGTGSLTDKLYKLNIKATNGNETLHSS 386



 Score = 25.4 bits (54), Expect(2) = 7e-08
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -3

Query: 52  KRKLDNHSSLTLWHARL 2
           KRKL N +S  LWH RL
Sbjct: 391 KRKLINKNSSMLWHKRL 407


>emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group]
          Length = 1405

 Score = 57.4 bits (137), Expect(2) = 9e-08
 Identities = 32/94 (34%), Positives = 50/94 (53%)
 Frame = -2

Query: 368 SRKLDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLDR 189
           +R   R+E  +R+ NG      A+G + L L NGF L L +  YVP + RN+ISV  LD 
Sbjct: 337 TRTTQRRESTIRVANGVEEKVEAVGDLPLELANGFILLLRDVFYVPSLQRNLISVSKLDF 396

Query: 188 ECFKFVIENGTCSIFKDYALIYSGYLTNCLYTVT 87
           + +     +G C ++ + A I    L + LY ++
Sbjct: 397 DGYDCRFGSGKCELWHNNACIGLAVLRDELYLLS 430



 Score = 24.3 bits (51), Expect(2) = 9e-08
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 82  IIPYLTIQQNKRKLDNHSSLTLWHARL 2
           ++  LT +  KRK     S  LWH RL
Sbjct: 437 VVSSLTKENKKRKRTPDVSSKLWHCRL 463


>emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group]
          Length = 1405

 Score = 57.4 bits (137), Expect(2) = 9e-08
 Identities = 32/94 (34%), Positives = 50/94 (53%)
 Frame = -2

Query: 368 SRKLDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLDR 189
           +R   R+E  +R+ NG      A+G + L L NGF L L +  YVP + RN+ISV  LD 
Sbjct: 337 TRTTQRRESTIRVANGVEEKVEAVGDLPLELANGFILLLRDVFYVPSLQRNLISVSKLDF 396

Query: 188 ECFKFVIENGTCSIFKDYALIYSGYLTNCLYTVT 87
           + +     +G C ++ + A I    L + LY ++
Sbjct: 397 DGYDCRFGSGKCELWHNNACIGLAVLRDELYLLS 430



 Score = 24.3 bits (51), Expect(2) = 9e-08
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 82  IIPYLTIQQNKRKLDNHSSLTLWHARL 2
           ++  LT +  KRK     S  LWH RL
Sbjct: 437 VVSSLTKENKKRKRTPDVSSKLWHCRL 463


>gb|ABF96044.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 1395

 Score = 57.4 bits (137), Expect(2) = 9e-08
 Identities = 32/94 (34%), Positives = 50/94 (53%)
 Frame = -2

Query: 368 SRKLDRKEMVLRMGNGARVAALAIGTVYLSLENGFNLCLNNCLYVPDIIRNIISVPVLDR 189
           +R   R+E  +R+ NG      A+G + L L NGF L L +  YVP + RN+ISV  LD 
Sbjct: 333 TRTTQRRESTIRVANGVEEKVEAVGDLPLELANGFILLLRDVFYVPSLQRNLISVSKLDF 392

Query: 188 ECFKFVIENGTCSIFKDYALIYSGYLTNCLYTVT 87
           + +     +G C ++ + A I    L + LY ++
Sbjct: 393 DGYDCRFGSGKCELWHNNACIGLAVLRDELYLLS 426



 Score = 24.3 bits (51), Expect(2) = 9e-08
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 82  IIPYLTIQQNKRKLDNHSSLTLWHARL 2
           ++  LT +  KRK     S  LWH RL
Sbjct: 433 VVSSLTKENKKRKRTPDVSSKLWHCRL 459