BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00021945
         (1335 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   545   e-152
gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i...   538   e-150
emb|CBI26203.3| unnamed protein product [Vitis vinifera]              536   e-150
ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Popu...   530   e-148
ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citr...   530   e-148
gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' ...   528   e-147
ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   527   e-147
gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus not...   523   e-146
ref|XP_004229420.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   523   e-146
gb|EOY05582.1| P-loop containing nucleoside triphosphate hydrola...   519   e-144
ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   518   e-144
ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putativ...   518   e-144
gb|EMJ24082.1| hypothetical protein PRUPE_ppa005191mg [Prunus pe...   508   e-141
ref|XP_006400479.1| hypothetical protein EUTSA_v10013438mg [Eutr...   503   e-140
ref|NP_974812.1| DEAD-box ATP-dependent RNA helicase 58 [Arabido...   500   e-139
ref|XP_004507705.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   499   e-138
ref|XP_002871872.1| hypothetical protein ARALYDRAFT_488806 [Arab...   496   e-138
ref|XP_004134454.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   495   e-137
ref|XP_003610394.1| DEAD-box ATP-dependent RNA helicase [Medicag...   491   e-136
ref|XP_006290141.1| hypothetical protein CARUB_v10003807mg [Caps...   490   e-136

>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
            [Vitis vinifera]
          Length = 482

 Score =  545 bits (1404), Expect = e-152
 Identities = 279/402 (69%), Positives = 324/402 (80%), Gaps = 1/402 (0%)
 Frame = -2

Query: 1208 PLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGE-SDVGTTKNTCTTLRELCQG 1032
            P   S  R + TV      +N   ++ P  A+L+S+ + E SD+G       TLRE+CQG
Sbjct: 28   PSLNSNRRTDSTVHFTRRVSNSNCNAKPAQATLNSSSITEASDIG---ERTLTLREICQG 84

Query: 1031 HVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAK 852
             VP+HVLRR EEVG+I+PT VQ +ALPVL SGRDC++ AQTGSGKTL YLLLIFSVVN K
Sbjct: 85   CVPEHVLRRIEEVGFIVPTDVQQQALPVLLSGRDCILHAQTGSGKTLTYLLLIFSVVNTK 144

Query: 851  RSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKV 672
             S+VQAL+VVPTRELG+QVTKVARMLAAK +E E EQ+SCTVMALLDGG L+RHKSWLK 
Sbjct: 145  ISAVQALIVVPTRELGIQVTKVARMLAAKPMEPELEQKSCTVMALLDGGMLKRHKSWLKA 204

Query: 671  EPPAIVIATLRSLCQMLDKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXSINN 492
            EPP IV+AT+RSLCQML+KQI  L+ MRVLVIDEVDFMFN                S NN
Sbjct: 205  EPPTIVVATVRSLCQMLEKQIFKLESMRVLVIDEVDFMFNASKQVGSLRKLLTSYSSTNN 264

Query: 491  RQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYST 312
            RQT+FASASIPQHRRF++DCIQQKWT++DVVHVHVNP+EPMPS L+HRFVIC K ER  T
Sbjct: 265  RQTVFASASIPQHRRFLHDCIQQKWTKSDVVHVHVNPIEPMPSSLHHRFVICNKYERRQT 324

Query: 311  LLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFN 132
            LL LL SDAP+  IIFVGEQSEKSKKAGNAP  TLLI+FLKTS+ GCP+++LLEEDMNFN
Sbjct: 325  LLSLLHSDAPECGIIFVGEQSEKSKKAGNAPSATLLIDFLKTSYGGCPDILLLEEDMNFN 384

Query: 131  QRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNFDLPK 6
             RAASL++V+Q GGYLL++TDIAARGVDLPETTHIYNFDLP+
Sbjct: 385  LRAASLSEVRQRGGYLLISTDIAARGVDLPETTHIYNFDLPR 426


>gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
            gi|11385590|gb|AAG34876.1|AF261021_1 putative chloroplast
            RNA helicase VDL isoform 1 [Nicotiana tabacum]
          Length = 466

 Score =  538 bits (1386), Expect = e-150
 Identities = 278/421 (66%), Positives = 325/421 (77%)
 Frame = -2

Query: 1265 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 1086
            MAC SA  L +  WTSS       F +PN T   P      +    P+ AS S++ V E+
Sbjct: 1    MACFSATQLHTLLWTSSLNRTSHHF-KPNYTYRTP----KFLFRQKPLIASFSTSDV-EA 54

Query: 1085 DVGTTKNTCTTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 906
               T  ++  TLRELC GHVP+HV+RR EEVGY++PT VQ +ALP L+SGRDCV+ AQTG
Sbjct: 55   RTETKDSSTATLRELCHGHVPEHVIRRVEEVGYVIPTEVQLQALPFLYSGRDCVLHAQTG 114

Query: 905  SGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQSCTV 726
            SGKTLAYLL I SV++++RS+VQAL+VVPTRELGMQVTKVARMLAAK  ELES  +SCTV
Sbjct: 115  SGKTLAYLLQILSVIDSQRSAVQALIVVPTRELGMQVTKVARMLAAKPSELESGPKSCTV 174

Query: 725  MALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQILNLDRMRVLVIDEVDFMFNXX 546
            MALLDGG L RHKSWLK EPP IV+AT+ SLCQML+K IL LD  +VLV+DEVDFMFN  
Sbjct: 175  MALLDGGMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSS 234

Query: 545  XXXXXXXXXXXXXXSINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPVEPMP 366
                          +  NRQTIFASASIPQHRRF+YDC+QQKWT+ADVVHVHVN VEPMP
Sbjct: 235  KEISSLKRLLTSYSTSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHVNSVEPMP 294

Query: 365  SCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIEFLKT 186
            SCL+HRFV+C KRE+   LL LLQ D+P+SAIIFV EQSEKSKKAGNAPP TLL++FL +
Sbjct: 295  SCLHHRFVVCTKREKNQVLLSLLQVDSPESAIIFVSEQSEKSKKAGNAPPITLLVDFLMS 354

Query: 185  SHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNFDLPK 6
            S  G   + LLEEDMNFN+RAASL++++  GGYLLVATDIAARGVDLPETTHIYNFD+PK
Sbjct: 355  SSGGFSNVSLLEEDMNFNKRAASLSELRGGGGYLLVATDIAARGVDLPETTHIYNFDIPK 414

Query: 5    D 3
            D
Sbjct: 415  D 415


>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  536 bits (1381), Expect = e-150
 Identities = 277/406 (68%), Positives = 323/406 (79%), Gaps = 5/406 (1%)
 Frame = -2

Query: 1208 PLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGE-SDVGTTKNTCTTLRELCQG 1032
            P   S  R + TV      +N   ++ P  A+L+S+ + E SD+G       TLRE+CQG
Sbjct: 28   PSLNSNRRTDSTVHFTRRVSNSNCNAKPAQATLNSSSITEASDIG---ERTLTLREICQG 84

Query: 1031 HVPDHVLR----RAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSV 864
             VP+HV+     R EEVG+I+PT VQ +ALPVL SGRDC++ AQTGSGKTL YLLLIFSV
Sbjct: 85   CVPEHVIALICFRIEEVGFIVPTDVQQQALPVLLSGRDCILHAQTGSGKTLTYLLLIFSV 144

Query: 863  VNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKS 684
            VN K S+VQAL+VVPTRELG+QVTKVARMLAAK +E E EQ+SCTVMALLDGG L+RHKS
Sbjct: 145  VNTKISAVQALIVVPTRELGIQVTKVARMLAAKPMEPELEQKSCTVMALLDGGMLKRHKS 204

Query: 683  WLKVEPPAIVIATLRSLCQMLDKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXX 504
            WLK EPP IV+AT+RSLCQML+KQI  L+ MRVLVIDEVDFMFN                
Sbjct: 205  WLKAEPPTIVVATVRSLCQMLEKQIFKLESMRVLVIDEVDFMFNASKQVGSLRKLLTSYS 264

Query: 503  SINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRE 324
            S NNRQT+FASASIPQHRRF++DCIQQKWT++DVVHVHVNP+EPMPS L+HRFVIC K E
Sbjct: 265  STNNRQTVFASASIPQHRRFLHDCIQQKWTKSDVVHVHVNPIEPMPSSLHHRFVICNKYE 324

Query: 323  RYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEED 144
            R  TLL LL SDAP+  IIFVGEQSEKSKKAGNAP  TLLI+FLKTS+ GCP+++LLEED
Sbjct: 325  RRQTLLSLLHSDAPECGIIFVGEQSEKSKKAGNAPSATLLIDFLKTSYGGCPDILLLEED 384

Query: 143  MNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNFDLPK 6
            MNFN RAASL++V+Q GGYLL++TDIAARGVDLPETTHIYNFDLP+
Sbjct: 385  MNFNLRAASLSEVRQRGGYLLISTDIAARGVDLPETTHIYNFDLPR 430


>ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Populus trichocarpa]
            gi|550329495|gb|EEF01963.2| hypothetical protein
            POPTR_0010s10230g [Populus trichocarpa]
          Length = 477

 Score =  530 bits (1366), Expect = e-148
 Identities = 263/375 (70%), Positives = 309/375 (82%), Gaps = 1/375 (0%)
 Frame = -2

Query: 1127 PISASLSSTCVGE-SDVGTTKNTCTTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALP 951
            P+ A L+S  + + +D    K    TLRE+C G VP+H+LRR EEVGY +PT VQ +ALP
Sbjct: 51   PLKAILNSPSLTKVADDAKEKGEALTLREICLGRVPEHLLRRVEEVGYAVPTDVQKQALP 110

Query: 950  VLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLA 771
            VLFSGRDC++ AQTGSGKTLAYLLLIFSV+N +RS+VQAL+VVPTRELG+QVTKVARMLA
Sbjct: 111  VLFSGRDCILHAQTGSGKTLAYLLLIFSVINTQRSAVQALIVVPTRELGIQVTKVARMLA 170

Query: 770  AKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQILNLDRM 591
            A   E ++EQ+SCTVMALLDGG LRRHKSWLK EPP IV+AT+ SLCQML+K +L L+ M
Sbjct: 171  ATPTENDAEQKSCTVMALLDGGMLRRHKSWLKAEPPTIVVATIASLCQMLEKHLLKLESM 230

Query: 590  RVLVIDEVDFMFNXXXXXXXXXXXXXXXXSINNRQTIFASASIPQHRRFMYDCIQQKWTQ 411
            +VLVIDEVDFMFN                S N+RQT+FASASIPQH RF+YDCIQQKWT+
Sbjct: 231  QVLVIDEVDFMFNSSKQVSSLRKLLTSYSSCNSRQTVFASASIPQHNRFLYDCIQQKWTK 290

Query: 410  ADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKA 231
             DVVHVHVNP+EPMP+CL HRFVIC K++R+ TLL LLQSDAP+S IIFVGEQSEKSKKA
Sbjct: 291  RDVVHVHVNPIEPMPTCLQHRFVICSKKQRHQTLLSLLQSDAPKSGIIFVGEQSEKSKKA 350

Query: 230  GNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGV 51
            GN PPT  L++FLKTS+  C E++LLEEDMNFN RAASL++V+Q GGYLLVATDIAARGV
Sbjct: 351  GNGPPTIDLVDFLKTSYGDCSEILLLEEDMNFNSRAASLSEVRQGGGYLLVATDIAARGV 410

Query: 50   DLPETTHIYNFDLPK 6
            DLPE THIYNF+LP+
Sbjct: 411  DLPEITHIYNFNLPR 425


>ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citrus clementina]
            gi|557521726|gb|ESR33093.1| hypothetical protein
            CICLE_v10004897mg [Citrus clementina]
          Length = 473

 Score =  530 bits (1364), Expect = e-148
 Identities = 257/375 (68%), Positives = 311/375 (82%), Gaps = 1/375 (0%)
 Frame = -2

Query: 1127 PISASLSSTCVGESDVGT-TKNTCTTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALP 951
            P+ A LSS+ V   ++   T N   TLRELCQGHVP+HVLRR +E GY+LPT +Q EALP
Sbjct: 43   PLRAVLSSSAVSTEELAAGTGNNSLTLRELCQGHVPEHVLRRMDETGYVLPTDIQREALP 102

Query: 950  VLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLA 771
            VLFS RDC++ AQTGSGKTL YLLLIFS+VNA+RS+VQA++VVPTRELGMQVTKVAR+LA
Sbjct: 103  VLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLA 162

Query: 770  AKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQILNLDRM 591
            AK  + + E + CTVMALLDGG LRRHKSWLK EPP IV+AT+ SLCQ+++K I  L+ +
Sbjct: 163  AKPSDTDLEHKPCTVMALLDGGMLRRHKSWLKAEPPTIVVATMGSLCQLIEKHIFKLESV 222

Query: 590  RVLVIDEVDFMFNXXXXXXXXXXXXXXXXSINNRQTIFASASIPQHRRFMYDCIQQKWTQ 411
            +VLVIDEVDF+FN                S NNRQT+FASASIPQHRRF++DCIQQKWT+
Sbjct: 223  QVLVIDEVDFLFNSSKQVSSLKKLLASYSSCNNRQTVFASASIPQHRRFLHDCIQQKWTK 282

Query: 410  ADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKA 231
            +DVVHVHVN ++P+PSCL+HRFVICGK+ +Y TLL L+QSDAP+S IIFVGEQSEKSKKA
Sbjct: 283  SDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKA 342

Query: 230  GNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGV 51
            GNAP TTLL++FL  S++G  +++LLEE+MNFN RAASL +V+Q GGYLLV+TDIAARG+
Sbjct: 343  GNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGI 402

Query: 50   DLPETTHIYNFDLPK 6
            DLPETTHIYNFDLP+
Sbjct: 403  DLPETTHIYNFDLPR 417


>gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana tabacum]
          Length = 466

 Score =  528 bits (1360), Expect = e-147
 Identities = 274/421 (65%), Positives = 322/421 (76%)
 Frame = -2

Query: 1265 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 1086
            MAC SA  L +  WTSS       F +PN T   P      +    P+ AS S++ + E+
Sbjct: 1    MACFSATQLHTLLWTSSLNRTSHHF-KPNYTYRTP----KFLFRQKPLIASFSTSDI-EA 54

Query: 1085 DVGTTKNTCTTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 906
               T  ++  T RELC GHVP+HV+RR EEVGY++PT VQ  ALP L+SGRDCV+ AQTG
Sbjct: 55   RTETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTG 114

Query: 905  SGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQSCTV 726
            SGKTLAYLL + SV++++RS+VQAL+VVPTRELGMQVTKVAR LAAK  EL+S  +SCTV
Sbjct: 115  SGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSCTV 174

Query: 725  MALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQILNLDRMRVLVIDEVDFMFNXX 546
            MALLDGG L RHKSWLK EPP IV+AT+ SLCQML+K IL LD  +VLV+DEVDFMFN  
Sbjct: 175  MALLDGGMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSS 234

Query: 545  XXXXXXXXXXXXXXSINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPVEPMP 366
                          S  NRQTIFASASIPQHRRF+YDC+QQKWT+ADVVHVHVN VEPMP
Sbjct: 235  KEISSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHVNSVEPMP 294

Query: 365  SCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIEFLKT 186
            SCL+HRFV+C KRE+   LL LLQ D+P+SAIIFV EQSEKSKKAGNAPP TLL++FL +
Sbjct: 295  SCLHHRFVVCTKREKNQVLLSLLQVDSPESAIIFVSEQSEKSKKAGNAPPITLLVDFLMS 354

Query: 185  SHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNFDLPK 6
            S  G   + LLEEDMNFN+RAASL++++  GGYLLVATDIAARGVDLPETTHIYNFD+PK
Sbjct: 355  SSGGFSNVSLLEEDMNFNKRAASLSELRGGGGYLLVATDIAARGVDLPETTHIYNFDIPK 414

Query: 5    D 3
            D
Sbjct: 415  D 415


>ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
            isoform X1 [Citrus sinensis]
          Length = 473

 Score =  527 bits (1357), Expect = e-147
 Identities = 256/375 (68%), Positives = 311/375 (82%), Gaps = 1/375 (0%)
 Frame = -2

Query: 1127 PISASLSSTCVGESDVGT-TKNTCTTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALP 951
            P+ A LSS+ V   ++   T N   TLRELCQGHVP+HVLRR +E GY+LPT +Q EALP
Sbjct: 43   PLRAVLSSSAVSIEELAAGTGNNSLTLRELCQGHVPEHVLRRMDETGYVLPTDIQREALP 102

Query: 950  VLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLA 771
            VLFS RDC++ AQTGSGKTL YLLLIFS+VNA+RS+VQA++VVPTRELGMQVTKVAR+LA
Sbjct: 103  VLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLA 162

Query: 770  AKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQILNLDRM 591
            AK  + + E + CTVMALLDGG LRRHKSWLK EPP IV+AT+ SLCQ+++K I  L+ +
Sbjct: 163  AKPSDTDLEHKPCTVMALLDGGMLRRHKSWLKAEPPTIVVATMGSLCQLIEKHIFKLESV 222

Query: 590  RVLVIDEVDFMFNXXXXXXXXXXXXXXXXSINNRQTIFASASIPQHRRFMYDCIQQKWTQ 411
            +VLVIDEVDF+FN                S NNRQT+FASASIPQHRRF+++CIQQKWT+
Sbjct: 223  QVLVIDEVDFLFNSSKQVSSLKKLLASYSSCNNRQTVFASASIPQHRRFLHNCIQQKWTK 282

Query: 410  ADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKA 231
            +DVVHVHVN ++P+PSCL+HRFVICGK+ +Y TLL L+QSDAP+S IIFVGEQSEKSKKA
Sbjct: 283  SDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKA 342

Query: 230  GNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGV 51
            GNAP TTLL++FL  S++G  +++LLEE+MNFN RAASL +V+Q GGYLLV+TDIAARG+
Sbjct: 343  GNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGI 402

Query: 50   DLPETTHIYNFDLPK 6
            DLPETTHIYNFDLP+
Sbjct: 403  DLPETTHIYNFDLPR 417


>gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus notabilis]
          Length = 464

 Score =  523 bits (1347), Expect = e-146
 Identities = 268/413 (64%), Positives = 320/413 (77%), Gaps = 7/413 (1%)
 Frame = -2

Query: 1223 TSSTKPLCPSFTRPNCTVPLPFNRTN---RMLDSLPISA----SLSSTCVGESDVGTTKN 1065
            T S  P   S   P  +  LPF   N    ++ S+P S     S+ +     +D    + 
Sbjct: 3    TLSPPPQLLSLKLPYSSHHLPFRFRNPNPSLVSSIPRSPLAIRSVPNLLSSAADAVPDEQ 62

Query: 1064 TCTTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTGSGKTLAY 885
               TLR LC+G VP+HV+   EEVGYI PT VQ +ALP+LFSGRDCV+ AQTGSGKTL Y
Sbjct: 63   RAATLRRLCEGLVPEHVV---EEVGYIEPTDVQRQALPILFSGRDCVLHAQTGSGKTLTY 119

Query: 884  LLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQSCTVMALLDGG 705
            LLLIFSVVN +RS+VQAL+VVPTRELGMQVTKVAR LAAK +E + EQ+SC+VMALLDGG
Sbjct: 120  LLLIFSVVNTQRSAVQALIVVPTRELGMQVTKVARTLAAKPMESDLEQKSCSVMALLDGG 179

Query: 704  TLRRHKSWLKVEPPAIVIATLRSLCQMLDKQILNLDRMRVLVIDEVDFMFNXXXXXXXXX 525
            TLRRHKSWLK EPP +V+AT+ SLCQ LDKQIL L+ MRVLVIDEVDF+FN         
Sbjct: 180  TLRRHKSWLKAEPPTVVVATIGSLCQQLDKQILTLESMRVLVIDEVDFIFNSSKQVSSLR 239

Query: 524  XXXXXXXSINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 345
                   +I+NRQT+FASASIPQHRRF+++C+QQKWT+++VVHVHVNP+EPMPSCL+H F
Sbjct: 240  KLLTSYSTISNRQTVFASASIPQHRRFLHECVQQKWTKSNVVHVHVNPIEPMPSCLHHNF 299

Query: 344  VICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPE 165
            VICGK +R  TLL LL SDAP S IIFVGEQSEKSKKAGNAPPTT+L++FLK S++G  E
Sbjct: 300  VICGKNKRLQTLLSLLHSDAPHSGIIFVGEQSEKSKKAGNAPPTTILMDFLKDSYKGGSE 359

Query: 164  LVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNFDLPK 6
            ++LLEEDMN N R ASL++V+Q GGYLLV+TD+AARGVDLPETTHIYNFDLP+
Sbjct: 360  ILLLEEDMNINSRTASLSEVRQGGGYLLVSTDLAARGVDLPETTHIYNFDLPR 412


>ref|XP_004229420.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
            [Solanum lycopersicum]
          Length = 459

 Score =  523 bits (1347), Expect = e-146
 Identities = 273/421 (64%), Positives = 322/421 (76%)
 Frame = -2

Query: 1265 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 1086
            MA  SA  L +  WTSS  P             + +     +L   P  AS SS+ V E+
Sbjct: 1    MAHFSATQLHTLSWTSSINP------------NVAYRTPKLLLYPKPSRASFSSSNV-ET 47

Query: 1085 DVGTTKNTCTTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 906
               T  ++ TTLRELC GHV +HV+ RAEE+GY++PT VQ +ALP LFSGRDCV+ AQTG
Sbjct: 48   TTLTKDSSTTTLRELCYGHVQEHVILRAEEIGYVMPTKVQLQALPFLFSGRDCVLHAQTG 107

Query: 905  SGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQSCTV 726
            SGKTLAYLL + SVV+++RS+VQAL+VVPTRELGMQVTKVARMLAA   E ES  +SCTV
Sbjct: 108  SGKTLAYLLQVLSVVDSQRSAVQALIVVPTRELGMQVTKVARMLAANPSEHESGLKSCTV 167

Query: 725  MALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQILNLDRMRVLVIDEVDFMFNXX 546
            MALLDGG L+RHKSWLK EPP IV+AT+ SLCQML+K IL LD  +VLV+DEVDFMFN  
Sbjct: 168  MALLDGGMLKRHKSWLKAEPPTIVVATIGSLCQMLEKHILKLDTCQVLVVDEVDFMFNSS 227

Query: 545  XXXXXXXXXXXXXXSINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPVEPMP 366
                          S  NRQTIFASASIPQHRRF+YDC+QQKWT+ADVVHVHVN VEPMP
Sbjct: 228  KEVSSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVNSVEPMP 287

Query: 365  SCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIEFLKT 186
            SCL+HRFV+C + E+   LL LLQ+D+P+SAIIFV EQSEKSKKAG+APPTTLL++FLK+
Sbjct: 288  SCLHHRFVVCNRMEKNPMLLSLLQTDSPESAIIFVSEQSEKSKKAGSAPPTTLLVDFLKS 347

Query: 185  SHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNFDLPK 6
            S     ++ LLEEDMNFNQRAASL++++  GGYLLVATDIAARGVDLPETTHIYNFD+PK
Sbjct: 348  SCGRFSDISLLEEDMNFNQRAASLSELRGGGGYLLVATDIAARGVDLPETTHIYNFDIPK 407

Query: 5    D 3
            D
Sbjct: 408  D 408


>gb|EOY05582.1| P-loop containing nucleoside triphosphate hydrolases superfamily
            protein isoform 1 [Theobroma cacao]
          Length = 477

 Score =  519 bits (1336), Expect = e-144
 Identities = 271/417 (64%), Positives = 318/417 (76%), Gaps = 11/417 (2%)
 Frame = -2

Query: 1223 TSSTKPLCPSFTRP-----NCTVPL-PFNRTNRMLDSLPISASLSSTCVGESDVGTTKNT 1062
            TS+T  L  + T P      C   L P NR   +  S   SA    +    + V  TK  
Sbjct: 5    TSATVLLSLTITAPYPKPTTCRFLLQPRNRYLNLSSSANFSAKALFSSYNSNSVPLTKEL 64

Query: 1061 CT-----TLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTGSGK 897
             T     TLRE+CQ HVPDHVL R EE+GY++PT VQ EALPVLFSG DC++ AQTGSGK
Sbjct: 65   ETNCNSLTLREICQDHVPDHVLGRMEELGYVMPTDVQREALPVLFSGNDCILHAQTGSGK 124

Query: 896  TLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQSCTVMAL 717
            TL YLLLI+SV+N KRS+VQAL+VVPTRELGMQVTKVARMLAAK ++ E EQ+S TVMAL
Sbjct: 125  TLTYLLLIYSVINPKRSAVQALIVVPTRELGMQVTKVARMLAAKPMDPEVEQKSYTVMAL 184

Query: 716  LDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQILNLDRMRVLVIDEVDFMFNXXXXX 537
            LDGG LRRHKSWLK EPP IV+AT+ SL QML+KQI  LD MR+LV+DEVDF+FN     
Sbjct: 185  LDGGMLRRHKSWLKAEPPNIVVATIGSLSQMLEKQIFKLDSMRILVVDEVDFIFNSSKQV 244

Query: 536  XXXXXXXXXXXSINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPVEPMPSCL 357
                       S NNRQT+FASASIPQHRRF++DCIQQKWT+ DVVHVHVNPV+PMPSCL
Sbjct: 245  SSIRKLLTSYSSCNNRQTVFASASIPQHRRFLHDCIQQKWTKGDVVHVHVNPVKPMPSCL 304

Query: 356  YHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIEFLKTSHE 177
             HRFVICG++E++  LL LLQSD P+S IIFV EQSEKSKKAG AP TTL+I+FLK S+ 
Sbjct: 305  LHRFVICGRKEKHRLLLSLLQSDLPESGIIFVNEQSEKSKKAGKAPSTTLIIDFLKASYG 364

Query: 176  GCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNFDLPK 6
            G  E++LLE++MNFN RAASL++V+Q GG+LLV+TDIAARG+DLPETT IYNFDLPK
Sbjct: 365  GSLEIILLEDNMNFNSRAASLSEVRQGGGHLLVSTDIAARGIDLPETTDIYNFDLPK 421


>ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
            [Solanum tuberosum]
          Length = 462

 Score =  518 bits (1334), Expect = e-144
 Identities = 275/424 (64%), Positives = 322/424 (75%), Gaps = 3/424 (0%)
 Frame = -2

Query: 1265 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 1086
            MA  SA  L++  WTSS  P        N T   P      +    P+  S SS+ V E+
Sbjct: 1    MAYFSATQLQTLSWTSSINP--------NVTYRTP----KLLFYPKPLRVSFSSSNV-ET 47

Query: 1085 DVGTTKNTCTTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 906
               T  ++ TTLRELC GHV +HV+RRAEEVGY++PT VQ +ALP LFSGRDCV+ AQTG
Sbjct: 48   TTLTKDSSTTTLRELCYGHVQEHVIRRAEEVGYVIPTEVQLQALPFLFSGRDCVLHAQTG 107

Query: 905  SGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQSCTV 726
            SGKTLAYLL + SVV+++RS+VQAL+VVPTRELGMQVTKVARMLAA   E ES  +SCTV
Sbjct: 108  SGKTLAYLLQVLSVVDSQRSAVQALIVVPTRELGMQVTKVARMLAANPSEHESGLKSCTV 167

Query: 725  MALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQILNLDRMRVLVIDEVDFMFNXX 546
            MALLDGG L+RHKSWLK EPP IV+AT+ SLCQML+K IL LD  +VLV+DEVDFMFN  
Sbjct: 168  MALLDGGMLKRHKSWLKAEPPTIVVATIGSLCQMLEKHILKLDTCQVLVVDEVDFMFNSS 227

Query: 545  XXXXXXXXXXXXXXSINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPVEPMP 366
                          S  NRQTIFASASIPQHRRF+YDC+QQKWT+ADVVHVHVN VEPMP
Sbjct: 228  KEVSSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVNSVEPMP 287

Query: 365  SCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIEFLKT 186
            SCL+HRFV+C + E+   LL LLQ+D+P SAIIFV EQS KSKKAG+APPTTLL++FLK+
Sbjct: 288  SCLHHRFVVCNRTEKNPMLLSLLQTDSPGSAIIFVSEQSGKSKKAGSAPPTTLLVDFLKS 347

Query: 185  SHEGCPELVLLEEDMNFNQRAASLTDVK---QSGGYLLVATDIAARGVDLPETTHIYNFD 15
            S     ++ LLEEDMNFNQRAASL++++     GGYLLVATDIAARGVDLPETTHIYNFD
Sbjct: 348  SRGRFSDVSLLEEDMNFNQRAASLSELRGGGGGGGYLLVATDIAARGVDLPETTHIYNFD 407

Query: 14   LPKD 3
            +PKD
Sbjct: 408  IPKD 411


>ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223543830|gb|EEF45358.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 476

 Score =  518 bits (1333), Expect = e-144
 Identities = 270/432 (62%), Positives = 324/432 (75%), Gaps = 2/432 (0%)
 Frame = -2

Query: 1295 SSTGETWLISMA-CSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPIS 1119
            SST  T L+S   C  +     F   S++      F        L F+    +L+S   S
Sbjct: 3    SSTSHTQLLSFCFCKPSTQRHRFLLQSTSNDNLNLFKNRGLLSTLSFSHLQAVLNS---S 59

Query: 1118 ASLSSTCVGESDVGTTK-NTCTTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLF 942
             SL +    E +    K N   TLRELCQ +VP+ VL R EE+GY++PT VQ +ALPVLF
Sbjct: 60   TSLITKEEEEEEQFDPKSNHFLTLRELCQNYVPEPVLHRMEEIGYVMPTDVQRQALPVLF 119

Query: 941  SGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKS 762
            SG+DC++  QTGSGKTLAYLLLI+SV+NA+RS+VQAL++VPTRELGMQVTKVARMLAAK 
Sbjct: 120  SGQDCILHGQTGSGKTLAYLLLIYSVINAQRSAVQALIIVPTRELGMQVTKVARMLAAKP 179

Query: 761  LELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQILNLDRMRVL 582
            +++       TVMALLDGG LRRHKSWLK EPP IV+AT+ SLCQML+K I  LD M+VL
Sbjct: 180  MDV-------TVMALLDGGMLRRHKSWLKAEPPKIVVATIASLCQMLEKHIFKLDSMQVL 232

Query: 581  VIDEVDFMFNXXXXXXXXXXXXXXXXSINNRQTIFASASIPQHRRFMYDCIQQKWTQADV 402
            VIDEVDFMFN                S N+RQT+FASASIPQHRRF+YDCIQQKWT++D 
Sbjct: 233  VIDEVDFMFNSSKQVSSLRKLLTSYSSCNSRQTVFASASIPQHRRFLYDCIQQKWTKSDA 292

Query: 401  VHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNA 222
            VHVH+NPV+PMPSCL HRFVIC K +R+  LL LLQ DAP+S I+FVGEQSEKSKKAG+A
Sbjct: 293  VHVHINPVQPMPSCLQHRFVICSKNQRHQILLSLLQCDAPKSGIVFVGEQSEKSKKAGHA 352

Query: 221  PPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLP 42
            PPTTLL++FL+TS+  C +++LLEEDMNFN RAASL++VKQ GGYLLVATDIAARGVDLP
Sbjct: 353  PPTTLLVDFLETSYSDCSDILLLEEDMNFNLRAASLSEVKQGGGYLLVATDIAARGVDLP 412

Query: 41   ETTHIYNFDLPK 6
            ETTHIYNF+LP+
Sbjct: 413  ETTHIYNFELPR 424


>gb|EMJ24082.1| hypothetical protein PRUPE_ppa005191mg [Prunus persica]
          Length = 473

 Score =  508 bits (1309), Expect = e-141
 Identities = 258/388 (66%), Positives = 309/388 (79%)
 Frame = -2

Query: 1169 PLPFNRTNRMLDSLPISASLSSTCVGESDVGTTKNTCTTLRELCQGHVPDHVLRRAEEVG 990
            P  F+    + +  PI A L+ST +  ++ G+     T LR++CQ HVPDHVL + EE+G
Sbjct: 37   PRLFSSNGFVSNCSPIQALLNSTPI-TTEAGSEPEPFT-LRQICQSHVPDHVLCKMEELG 94

Query: 989  YILPTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRE 810
            +++PT VQ +ALP LFSGRDC++ AQTGSGKTL YLLL+FS+VNA+RS+VQAL+VVPTRE
Sbjct: 95   FVVPTPVQRQALPTLFSGRDCILHAQTGSGKTLTYLLLVFSIVNARRSAVQALIVVPTRE 154

Query: 809  LGMQVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLC 630
            LGMQVTKVARMLA K  E E EQ+SCTVMALLDGG L RHKSWLK EPP IV+AT+ SLC
Sbjct: 155  LGMQVTKVARMLATKPKEGELEQKSCTVMALLDGGMLMRHKSWLKAEPPTIVVATIGSLC 214

Query: 629  QMLDKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXSINNRQTIFASASIPQHR 450
            QML+K ++ L+ MRVLVIDEVDFMF+                 IN RQT+FASASIPQH+
Sbjct: 215  QMLEKHMIKLEAMRVLVIDEVDFMFSSKQVSSLRKLLTSYSS-INTRQTVFASASIPQHK 273

Query: 449  RFMYDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAI 270
             F+  CIQQKWT+ D +HVHVNPVEPMPSCL+HRFVIC K  R+ TLL LLQSDAPQSAI
Sbjct: 274  IFLDKCIQQKWTKNDTIHVHVNPVEPMPSCLHHRFVICLKNRRHETLLSLLQSDAPQSAI 333

Query: 269  IFVGEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGG 90
            +FVGEQSEKSKKAGNA   TLLI FLK S+EG  +++LLEEDMNFN RAASL++V+Q+G 
Sbjct: 334  VFVGEQSEKSKKAGNASSATLLINFLKASYEGYSDILLLEEDMNFNSRAASLSEVRQAGS 393

Query: 89   YLLVATDIAARGVDLPETTHIYNFDLPK 6
            YLLV+TDIAARG+DLPETTHIYN+DLP+
Sbjct: 394  YLLVSTDIAARGLDLPETTHIYNYDLPR 421


>ref|XP_006400479.1| hypothetical protein EUTSA_v10013438mg [Eutrema salsugineum]
            gi|557101569|gb|ESQ41932.1| hypothetical protein
            EUTSA_v10013438mg [Eutrema salsugineum]
          Length = 473

 Score =  503 bits (1296), Expect = e-140
 Identities = 256/421 (60%), Positives = 318/421 (75%), Gaps = 7/421 (1%)
 Frame = -2

Query: 1247 PHLRSFPWTSSTKPLCPS-FTRPNCTVPLPFNRTNRMLDSLPISA------SLSSTCVGE 1089
            PH+   P  S   P  PS F R   T+   F+ T R + S   S       +++  C   
Sbjct: 9    PHVALLPKFS---PFYPSLFARQKLTL---FHSTTRAIKSSSNSRITINLQAVADACSEI 62

Query: 1088 SDVGTTKNTCTTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQT 909
               G T+ T  TLR +C+G VP+H++ R EE+G++ PT++Q EALP LF+GRDC++ AQT
Sbjct: 63   ESNGVTETTDLTLRNICEGFVPEHIIHRMEEIGFVFPTNIQREALPTLFTGRDCILHAQT 122

Query: 908  GSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQSCT 729
            GSGKTL YLLLIFS++N +RSSVQA++VVPTRELGMQVTKVARMLAAKS ++E +   CT
Sbjct: 123  GSGKTLTYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAKSTDIEVK--GCT 180

Query: 728  VMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQILNLDRMRVLVIDEVDFMFNX 549
            VMALLDGG LRRHKSWLK EPPAIV+AT+ SLC ML+K IL LD +RVLV+DEVDF+F  
Sbjct: 181  VMALLDGGMLRRHKSWLKAEPPAIVVATVASLCHMLEKHILRLDSVRVLVVDEVDFLFYS 240

Query: 548  XXXXXXXXXXXXXXXSINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPVEPM 369
                           S + RQT+FASASIPQH+ F++DCIQQKWT+ DVVH+HV+ + PM
Sbjct: 241  SKQVGSVRKLLTTFSSCDKRQTVFASASIPQHKHFVHDCIQQKWTKRDVVHIHVSAIMPM 300

Query: 368  PSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIEFLK 189
            P CL HRFV+CGK+ ++  LL LL+SDAP+SAIIF GEQSEKSKKAGN P TTLLIEFLK
Sbjct: 301  PLCLLHRFVVCGKKNKHQILLALLKSDAPESAIIFAGEQSEKSKKAGNDPSTTLLIEFLK 360

Query: 188  TSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNFDLP 9
             S++G  E++LLEEDMNFN RAASLT+++Q GG+LLV+TDIAARG+DLPETTHI+NFDLP
Sbjct: 361  ASYDGLLEILLLEEDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLP 420

Query: 8    K 6
            +
Sbjct: 421  Q 421


>ref|NP_974812.1| DEAD-box ATP-dependent RNA helicase 58 [Arabidopsis thaliana]
            gi|108861900|sp|Q3E9C3.1|RH58_ARATH RecName:
            Full=DEAD-box ATP-dependent RNA helicase 58,
            chloroplastic; Flags: Precursor
            gi|332005287|gb|AED92670.1| DEAD-box ATP-dependent RNA
            helicase 58 [Arabidopsis thaliana]
          Length = 472

 Score =  500 bits (1287), Expect = e-139
 Identities = 257/425 (60%), Positives = 315/425 (74%), Gaps = 9/425 (2%)
 Frame = -2

Query: 1253 SAPHLRSFP---WTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGESD 1083
            + PHL  FP   + S    L PSF     T         R L S P S  ++   V E+ 
Sbjct: 7    NVPHLAFFPKISYASVFSTLKPSFFHSTST--------RRALKSSPSSRIINLQAVAETS 58

Query: 1082 VGTTKNTCT------TLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVI 921
                 N+ T      TLR++CQG VP+H+L R EE+G++ PT +Q EALP LF+GRDC++
Sbjct: 59   SEIESNSVTETTVPLTLRQICQGFVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCIL 118

Query: 920  QAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQ 741
             AQTGSGKTL YLLLIFS++N +RSSVQA++VVPTRELGMQVTKVARMLAAKS   E + 
Sbjct: 119  HAQTGSGKTLTYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAKS---EIDV 175

Query: 740  QSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQILNLDRMRVLVIDEVDF 561
            + CTVMALLDGGTLRRHKSWLK EPPAI++AT+ SLC ML+K I  +D +RVLV+DEVDF
Sbjct: 176  KGCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEVDF 235

Query: 560  MFNXXXXXXXXXXXXXXXXSINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNP 381
            +F                 S + RQT+FASASIPQH+ F++DCIQQKWT+ DVVHVHV+ 
Sbjct: 236  LFYSSKQVGSVRKLLTSFSSCDKRQTVFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSA 295

Query: 380  VEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLI 201
            + PMP CL HRFV+C K  ++  LL LL+SDAP+SAIIFVGEQSEKSKKAGN P TTLL+
Sbjct: 296  IMPMPLCLLHRFVMCEKTNKHQVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLM 355

Query: 200  EFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYN 21
            EFLKTS++G  E++LLE DMNFN RAASLT+++Q GG+LLV+TDIAARG+DLPETTHI+N
Sbjct: 356  EFLKTSYKGSLEILLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFN 415

Query: 20   FDLPK 6
            FDLP+
Sbjct: 416  FDLPQ 420


>ref|XP_004507705.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
            [Cicer arietinum]
          Length = 470

 Score =  499 bits (1285), Expect = e-138
 Identities = 248/408 (60%), Positives = 312/408 (76%), Gaps = 10/408 (2%)
 Frame = -2

Query: 1196 SFTRPNCTVPLPFNRTN--RMLDSL--------PISASLSSTCVGESDVGTTKNTCTTLR 1047
            SF  P C +P   N  +  R+  S+        P++    S  +   D G  K T  TL+
Sbjct: 15   SFENPTC-IPRSHNNHHFVRLFSSIHINRVSKTPLAIQNPSPTIPTPDNG--KLTTPTLK 71

Query: 1046 ELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFS 867
            +LCQ HVPD +L R EEVGY++PT VQ +ALP LF+GRDC++ AQTGSGKTL YLLLI+S
Sbjct: 72   QLCQTHVPDQILLRMEEVGYVMPTEVQRQALPRLFTGRDCILHAQTGSGKTLTYLLLIYS 131

Query: 866  VVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHK 687
            ++N ++S+VQALV+VPTRELGMQVTKVAR+LAAK   +E EQ+SCT+MALLDGGTLRR K
Sbjct: 132  IINTRKSAVQALVLVPTRELGMQVTKVARILAAKPTGVEGEQKSCTIMALLDGGTLRRQK 191

Query: 686  SWLKVEPPAIVIATLRSLCQMLDKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXX 507
            +W K EPPA+V+AT+ SLCQML++Q+ +L  +RVLV+DEVDF+FN               
Sbjct: 192  TWFKAEPPAVVVATVGSLCQMLERQLFSLGTLRVLVVDEVDFLFNSSKQASSLRKILTTY 251

Query: 506  XSINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKR 327
             S NNRQT+FASASIP H RF++D +QQKWT+ DV+H+HV+PVEPMPS LYHRF++C  +
Sbjct: 252  SSCNNRQTVFASASIPHHNRFLHDAVQQKWTKRDVIHIHVSPVEPMPSRLYHRFIVCDTK 311

Query: 326  ERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEE 147
             +  TLL L+QSDAP+S IIFVGEQSEKSKKAGNAP T+LLI+FLK S+ G  +++LLE+
Sbjct: 312  RKLQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTSLLIDFLKASYHGSLDILLLED 371

Query: 146  DMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNFDLPKD 3
            DMNFN RAASL +V++ GGYLLVATD+AARGVD PE THIYNFDLPK+
Sbjct: 372  DMNFNSRAASLLEVRKGGGYLLVATDVAARGVDFPEMTHIYNFDLPKN 419


>ref|XP_002871872.1| hypothetical protein ARALYDRAFT_488806 [Arabidopsis lyrata subsp.
            lyrata] gi|297317709|gb|EFH48131.1| hypothetical protein
            ARALYDRAFT_488806 [Arabidopsis lyrata subsp. lyrata]
          Length = 473

 Score =  496 bits (1278), Expect = e-138
 Identities = 256/421 (60%), Positives = 311/421 (73%), Gaps = 5/421 (1%)
 Frame = -2

Query: 1253 SAPHLRSFPWTSSTKP-----LCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGE 1089
            + PHL  FP  S   P     L PSF     T       +N  + +L   A  SS     
Sbjct: 7    NVPHLAFFPKISPFNPPLFSTLKPSFFHSTSTSRALKTSSNSRIINLQAVAETSSEIESN 66

Query: 1088 SDVGTTKNTCTTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQT 909
            S    T     TLR++CQG VP+H+L R EE+G+I PT +Q EALP LF+GRDC++ AQT
Sbjct: 67   S---ATDTAALTLRKICQGFVPEHILHRMEEIGFISPTDIQREALPTLFTGRDCILHAQT 123

Query: 908  GSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQSCT 729
            GSGKTL YLLLIFS++N +RSSVQA++VVPTRELGMQVTKVARMLAAKS   E + + CT
Sbjct: 124  GSGKTLTYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAKS---EIDVKGCT 180

Query: 728  VMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQILNLDRMRVLVIDEVDFMFNX 549
            VMALLDGGTLRRHKSWLK EPPAI++AT+ SLC ML+K I  LD ++VLV+DEVDF+F  
Sbjct: 181  VMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKHIFRLDSVKVLVVDEVDFLFYS 240

Query: 548  XXXXXXXXXXXXXXXSINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPVEPM 369
                           S + RQT+FASASIPQH+ F++DCIQQKWT+ DVVHVHV+ + PM
Sbjct: 241  SKQVGSVRKLLTSFSSCDKRQTVFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAIMPM 300

Query: 368  PSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIEFLK 189
            P CL HRFV+C K  ++  L  LL+SDAP+SAIIFVGEQSEKSKKAGN P TTLL+EFLK
Sbjct: 301  PLCLLHRFVMCEKTNKHQVLRALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLK 360

Query: 188  TSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNFDLP 9
            TS++G  E++LLE DMNFN RAASLT+++Q GG+LLV+TDIAARG+DLPETTHI+NFDLP
Sbjct: 361  TSYKGSLEILLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLP 420

Query: 8    K 6
            +
Sbjct: 421  Q 421


>ref|XP_004134454.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
            [Cucumis sativus] gi|449531697|ref|XP_004172822.1|
            PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
            chloroplastic-like [Cucumis sativus]
          Length = 473

 Score =  495 bits (1275), Expect = e-137
 Identities = 252/416 (60%), Positives = 313/416 (75%), Gaps = 8/416 (1%)
 Frame = -2

Query: 1229 PW----TSSTKPLCPSFTRPNCTVPLPFNRTNRML----DSLPISASLSSTCVGESDVGT 1074
            PW    +  + P+  SF  PN      F  TN  +     S P+ A LSS+ +   +V  
Sbjct: 14   PWLLLSSERSFPVHLSFQLPN------FINTNGPIYSTSKSRPLQALLSSSSL--KNVAE 65

Query: 1073 TKNTCTTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTGSGKT 894
            +    +TLRE+C GHVP+H+LRR EE+G++ PT VQ +ALPVLFSGRDCV+ AQTGSGKT
Sbjct: 66   SNFEASTLREICNGHVPEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQTGSGKT 125

Query: 893  LAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQSCTVMALL 714
            L YLLLIFSV+NAK+S+VQAL+VVPTRELGMQVTKVARMLAAK    E    S  VMALL
Sbjct: 126  LTYLLLIFSVINAKKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYVVMALL 185

Query: 713  DGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQILNLDRMRVLVIDEVDFMFNXXXXXX 534
            DGG LRRHK+WLK +PP I++AT+ SLCQM+++Q L+L  + VLVIDEVDFMF+      
Sbjct: 186  DGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSSSKQVS 245

Query: 533  XXXXXXXXXXSINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPVEPMPSCLY 354
                      S +NRQTIFASASIPQHR F++DCIQQKWT++ VVH+H+N  +PMPSCL 
Sbjct: 246  SLKKLLTSYSSFSNRQTIFASASIPQHRHFLHDCIQQKWTKSTVVHIHINSTQPMPSCLL 305

Query: 353  HRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIEFLKTSHEG 174
            HRFV C K +++ TLL LL +D PQSAIIFV EQSEKSKKAG  PPTTL+I+FLK S+ G
Sbjct: 306  HRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLKASYGG 365

Query: 173  CPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNFDLPK 6
            C +++LLEED+N+N RA+SL++++Q G YL+VATDI ARG+DLPETTHIYNFDLP+
Sbjct: 366  CSDVILLEEDVNYNLRASSLSELRQGGSYLIVATDIVARGIDLPETTHIYNFDLPR 421


>ref|XP_003610394.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|217074248|gb|ACJ85484.1| unknown [Medicago truncatula]
            gi|355511449|gb|AES92591.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
            gi|388507084|gb|AFK41608.1| unknown [Medicago truncatula]
          Length = 480

 Score =  491 bits (1265), Expect = e-136
 Identities = 254/439 (57%), Positives = 322/439 (73%), Gaps = 3/439 (0%)
 Frame = -2

Query: 1313 LILPFR---SSTGETWLISMACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNR 1143
            L+LP R   SS  +T+  S + SS+        +SS+     +  R   T   P    N 
Sbjct: 11   LLLPLRVLPSSQNQTFSFSSSSSSS--------SSSSSSTNINHHRVTTTTTTPLAIAN- 61

Query: 1142 MLDSLPISASLSSTCVGESDVGTTKNTCTTLRELCQGHVPDHVLRRAEEVGYILPTHVQH 963
                 P SA +  T   ++          TLR+LCQ HVPD +L+R EEVGY++PT VQ 
Sbjct: 62   -----PTSAIIPPTADDDT-------VPITLRQLCQSHVPDQLLQRMEEVGYVMPTPVQK 109

Query: 962  EALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVA 783
            +ALP LFSGRDC++ AQTGSGKTLAYLLLI+S+++ ++SS QALV+VPTRELGMQVTKVA
Sbjct: 110  QALPRLFSGRDCILHAQTGSGKTLAYLLLIYSIISTRKSSFQALVLVPTRELGMQVTKVA 169

Query: 782  RMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQILN 603
            R+LAAK   +E EQ+SCT+MALLDGGTLRRHKSW K EPPAIV+AT+ SLCQML++Q+ +
Sbjct: 170  RILAAKPTGVEGEQRSCTIMALLDGGTLRRHKSWFKAEPPAIVVATVESLCQMLERQLFS 229

Query: 602  LDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXSINNRQTIFASASIPQHRRFMYDCIQQ 423
            L  +RVLV+DEVDF+FN                S NNRQT+FASASIPQH +F+ + +QQ
Sbjct: 230  LGNLRVLVVDEVDFIFNSSKQVSSLRKILTSYSSCNNRQTVFASASIPQHNQFLNEAVQQ 289

Query: 422  KWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEK 243
            KWT+ DV+H+HV+PVEPMPS L HRF++C  + +  TLL L+QSDAP+S IIFV EQSEK
Sbjct: 290  KWTKRDVIHIHVSPVEPMPSRLSHRFIVCDIKRKLQTLLSLIQSDAPESGIIFVSEQSEK 349

Query: 242  SKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIA 63
            SKKAGN+P T+L+I+FLKTS+ G  +++LLE+DMNFN RAASL +V++ GGYLLVATD+A
Sbjct: 350  SKKAGNSPSTSLVIDFLKTSYHGSLDILLLEDDMNFNSRAASLLEVRKGGGYLLVATDVA 409

Query: 62   ARGVDLPETTHIYNFDLPK 6
            ARGVD PE THIYN+DLPK
Sbjct: 410  ARGVDFPEMTHIYNYDLPK 428


>ref|XP_006290141.1| hypothetical protein CARUB_v10003807mg [Capsella rubella]
            gi|482558847|gb|EOA23039.1| hypothetical protein
            CARUB_v10003807mg [Capsella rubella]
          Length = 471

 Score =  490 bits (1262), Expect = e-136
 Identities = 250/419 (59%), Positives = 309/419 (73%), Gaps = 5/419 (1%)
 Frame = -2

Query: 1247 PHLRSFPWTSSTKP-----LCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGESD 1083
            PHL  FP  S   P     L PSFT          +R N +   +   + + S       
Sbjct: 11   PHLGLFPKASPFHPSLFATLNPSFTTRALKSSSSASRINHLQALVDSFSEIESN------ 64

Query: 1082 VGTTKNTCTTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTGS 903
               T+ T  TLR++CQ  VP+H+L R EE+G++ PT +Q EALP LF+GRDC++ AQTGS
Sbjct: 65   -SATETTALTLRQICQAFVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGS 123

Query: 902  GKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGMQVTKVARMLAAKSLELESEQQSCTVM 723
            GKTL YLLLIFS++N +RSSVQA++VVPTRELGMQVTKVARMLAAK+   + + + CTVM
Sbjct: 124  GKTLTYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAKA---DIDVKGCTVM 180

Query: 722  ALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQMLDKQILNLDRMRVLVIDEVDFMFNXXX 543
            ALLDGGTLRRHKSWLK EPPAI++AT+ SLC ML+K I  LD +RVLV+DEVDF+F    
Sbjct: 181  ALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKHIFRLDSVRVLVLDEVDFLFYSSK 240

Query: 542  XXXXXXXXXXXXXSINNRQTIFASASIPQHRRFMYDCIQQKWTQADVVHVHVNPVEPMPS 363
                         S + RQT+FASASIPQH+ F++DCIQQKWT+ DVVHVHV+ + PMP 
Sbjct: 241  QVGSVRKLLTSFSSCDKRQTVFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAIRPMPL 300

Query: 362  CLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTTLLIEFLKTS 183
            CL HRFV C K  ++  LL LL+SDAP+SAIIFVGEQSEKSKKAGN P TTLL+EFLKTS
Sbjct: 301  CLLHRFVTCEKTNKHQVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTS 360

Query: 182  HEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLLVATDIAARGVDLPETTHIYNFDLPK 6
            + G  E++LLE DMNF+ RAASLT+++Q GG+LLV+TDIAARG+DLPETTHI+NFD+P+
Sbjct: 361  YNGPLEILLLEGDMNFHSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDIPQ 419