BLASTX nr result
ID: Rehmannia22_contig00021830
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00021830
(338 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006422522.1| hypothetical protein CICLE_v10028424mg [Citr... 78 1e-12
gb|EOX97560.1| Pentatricopeptide (PPR) repeat-containing protein... 78 1e-12
gb|AGH33847.1| PPR [Cucumis melo] 78 1e-12
gb|AAU04769.1| pentatricopeptide (PPR) repeat protein-like [Cucu... 78 1e-12
ref|XP_004248641.1| PREDICTED: pentatricopeptide repeat-containi... 76 4e-12
ref|XP_006360892.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
ref|XP_002278390.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
ref|XP_004156246.1| PREDICTED: uncharacterized protein LOC101223... 74 2e-11
ref|XP_004141623.1| PREDICTED: uncharacterized protein LOC101204... 74 2e-11
ref|XP_004292639.1| PREDICTED: pentatricopeptide repeat-containi... 73 4e-11
gb|EMJ01929.1| hypothetical protein PRUPE_ppa021547mg [Prunus pe... 70 4e-10
ref|XP_006409357.1| hypothetical protein EUTSA_v10022675mg [Eutr... 64 3e-08
ref|XP_002521239.1| pentatricopeptide repeat-containing protein,... 63 5e-08
gb|EXB24044.1| hypothetical protein L484_006076 [Morus notabilis] 62 8e-08
ref|XP_006297442.1| hypothetical protein CARUB_v10013465mg [Caps... 60 3e-07
ref|XP_003592666.1| Pentatricopeptide repeat-containing protein ... 60 3e-07
ref|NP_849962.1| pentatricopeptide repeat-containing protein [Ar... 59 7e-07
ref|XP_002884032.1| pentatricopeptide repeat-containing protein ... 59 7e-07
dbj|BAF01049.1| hypothetical protein [Arabidopsis thaliana] 59 7e-07
ref|NP_565402.1| pentatricopeptide repeat-containing protein [Ar... 59 7e-07
>ref|XP_006422522.1| hypothetical protein CICLE_v10028424mg [Citrus clementina]
gi|568866680|ref|XP_006486677.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17033-like [Citrus sinensis]
gi|557524456|gb|ESR35762.1| hypothetical protein
CICLE_v10028424mg [Citrus clementina]
Length = 451
Score = 77.8 bits (190), Expect = 1e-12
Identities = 45/84 (53%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = +1
Query: 91 LVCALTKQGHRFLSSLA--TTDEPSAATGLLRKFVASSSKHVAXXXXXXXXXXXXXDPRL 264
L LTKQG RFLSSLA T + AA+ L+ KFVASS + +A PRL
Sbjct: 31 LTARLTKQGQRFLSSLALAVTRDSKAASRLISKFVASSPQFIALNALSHLLSPDTTHPRL 90
Query: 265 SSLAFPLYSMIKRESWFCWNAKLV 336
SSLAFPLY I ESWF WN KLV
Sbjct: 91 SSLAFPLYMRITEESWFQWNPKLV 114
>gb|EOX97560.1| Pentatricopeptide (PPR) repeat-containing protein, putative
[Theobroma cacao]
Length = 456
Score = 77.8 bits (190), Expect = 1e-12
Identities = 41/81 (50%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = +1
Query: 103 LTKQGHRFLSSLATT---DEPSAATGLLRKFVASSSKHVAXXXXXXXXXXXXXDPRLSSL 273
LTKQGHRF SSLA T ++P+ A L++KFVASS K +A P LS+L
Sbjct: 34 LTKQGHRFFSSLAATADVNDPATANRLIKKFVASSPKSIALNALSHLLSPRNSHPHLSAL 93
Query: 274 AFPLYSMIKRESWFCWNAKLV 336
AFPLY+ I SW+ WN KLV
Sbjct: 94 AFPLYTKISETSWYNWNPKLV 114
>gb|AGH33847.1| PPR [Cucumis melo]
Length = 488
Score = 77.8 bits (190), Expect = 1e-12
Identities = 50/117 (42%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Frame = +1
Query: 19 PMIGGRGLQLSAPPISA--GFRQYPPL------VCALTKQGHRFLSSLATT---DEPSAA 165
P + G G++L P+ GFR YP L LTKQ HRFLS+L+TT + SA
Sbjct: 9 PYVIGDGVRLLLQPLKRLDGFRSYPFLPNLQVKCTTLTKQTHRFLSTLSTTAATGDQSAT 68
Query: 166 TGLLRKFVASSSKHVAXXXXXXXXXXXXXDPRLSSLAFPLYSMIKRESWFCWNAKLV 336
L+RKFVASS K + P L S A LYS I SWF WN+KLV
Sbjct: 69 NRLIRKFVASSPKSITLSVLSNIVSTHTPQPELCSAALTLYSRITEASWFTWNSKLV 125
>gb|AAU04769.1| pentatricopeptide (PPR) repeat protein-like [Cucumis melo]
Length = 488
Score = 77.8 bits (190), Expect = 1e-12
Identities = 50/117 (42%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Frame = +1
Query: 19 PMIGGRGLQLSAPPISA--GFRQYPPL------VCALTKQGHRFLSSLATTD---EPSAA 165
P + G G++L P+ GFR YP L LTKQ HRFLS+L+TT + SA
Sbjct: 9 PYVIGDGVRLFLQPLKRLDGFRSYPFLPNLQVKCTTLTKQTHRFLSTLSTTGATGDQSAT 68
Query: 166 TGLLRKFVASSSKHVAXXXXXXXXXXXXXDPRLSSLAFPLYSMIKRESWFCWNAKLV 336
L+RKFVASS K + P L S A LYS I SWF WN+KLV
Sbjct: 69 NRLIRKFVASSPKSITLSVLSNIVSTHTPQPELCSAALTLYSRITEASWFTWNSKLV 125
>ref|XP_004248641.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17033-like [Solanum lycopersicum]
Length = 459
Score = 76.3 bits (186), Expect = 4e-12
Identities = 54/113 (47%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Frame = +1
Query: 22 MIGGRGLQLSAPPISAGF-----RQYPPLVCALTKQGHRFLSSLATTDEP--SAATGLLR 180
MIGG L A +S R P C+L+KQGHRFLS+L TD SA LLR
Sbjct: 1 MIGGILLPAPAQLLSHRLSLWNRRPRPGPRCSLSKQGHRFLSTLIATDSDDISATRHLLR 60
Query: 181 KFVASSSKHVAXXXXXXXXXXXXXDP-RLSSLAFPLYSMIKRESWFCWNAKLV 336
KFV SSSKHVA RL SLA PLY I SWF WN+KLV
Sbjct: 61 KFVGSSSKHVALSTLSHLVSPTTTSHYRLCSLALPLYLEISEASWFDWNSKLV 113
>ref|XP_006360892.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17033-like [Solanum tuberosum]
Length = 459
Score = 75.5 bits (184), Expect = 7e-12
Identities = 45/83 (54%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +1
Query: 97 CALTKQGHRFLSSL--ATTDEPSAATGLLRKFVASSSKHVAXXXXXXXXXXXXXDP-RLS 267
C+L+KQGHRFLS+L A +++ SA LLRKFVASSSKHVA RL
Sbjct: 31 CSLSKQGHRFLSTLIAADSEDISATRHLLRKFVASSSKHVALSTLSHLVSPTTTSHYRLC 90
Query: 268 SLAFPLYSMIKRESWFCWNAKLV 336
SLA PLY I SWF WN+KLV
Sbjct: 91 SLALPLYLEISEASWFDWNSKLV 113
>ref|XP_002278390.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
[Vitis vinifera] gi|297744557|emb|CBI37819.3| unnamed
protein product [Vitis vinifera]
Length = 435
Score = 75.5 bits (184), Expect = 7e-12
Identities = 41/80 (51%), Positives = 49/80 (61%)
Frame = +1
Query: 97 CALTKQGHRFLSSLATTDEPSAATGLLRKFVASSSKHVAXXXXXXXXXXXXXDPRLSSLA 276
CAL+KQG FLSS+A +PSA+ L+ KF+ASSSK +A P LSSLA
Sbjct: 23 CALSKQGQLFLSSVAR--DPSASNRLICKFIASSSKSIALNALSHLLSPTTTHPYLSSLA 80
Query: 277 FPLYSMIKRESWFCWNAKLV 336
PLYS I SWF WN KL+
Sbjct: 81 LPLYSRISEASWFSWNPKLI 100
>ref|XP_004156246.1| PREDICTED: uncharacterized protein LOC101223617 [Cucumis sativus]
Length = 1296
Score = 73.9 bits (180), Expect = 2e-11
Identities = 49/117 (41%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Frame = +1
Query: 19 PMIGGRGLQLSAPPISA--GFRQYP-----PLVC-ALTKQGHRFLSSLATT---DEPSAA 165
P + G G++L P FR YP + C +LTKQ HRFLS+L+TT + SA
Sbjct: 9 PYVIGDGVRLFLHPFKRLHAFRSYPFVPNLQVKCTSLTKQTHRFLSTLSTTAATGDQSAT 68
Query: 166 TGLLRKFVASSSKHVAXXXXXXXXXXXXXDPRLSSLAFPLYSMIKRESWFCWNAKLV 336
L+RKFVASS K + P L S A LYS I SWF WN+KLV
Sbjct: 69 NRLIRKFVASSPKSITLSVLSNIVSTHTPQPELCSAALTLYSRITEASWFTWNSKLV 125
>ref|XP_004141623.1| PREDICTED: uncharacterized protein LOC101204365 [Cucumis sativus]
Length = 1913
Score = 73.9 bits (180), Expect = 2e-11
Identities = 49/117 (41%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Frame = +1
Query: 19 PMIGGRGLQLSAPPISA--GFRQYP-----PLVC-ALTKQGHRFLSSLATT---DEPSAA 165
P + G G++L P FR YP + C +LTKQ HRFLS+L+TT + SA
Sbjct: 9 PYVIGDGVRLFLHPFKRLHAFRSYPFVPNLQVKCTSLTKQTHRFLSTLSTTAATGDQSAT 68
Query: 166 TGLLRKFVASSSKHVAXXXXXXXXXXXXXDPRLSSLAFPLYSMIKRESWFCWNAKLV 336
L+RKFVASS K + P L S A LYS I SWF WN+KLV
Sbjct: 69 NRLIRKFVASSPKSITLSVLSNIVSTHTPQPELCSAALTLYSRITEASWFTWNSKLV 125
>ref|XP_004292639.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17033-like [Fragaria vesca subsp. vesca]
Length = 448
Score = 72.8 bits (177), Expect = 4e-11
Identities = 45/113 (39%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Frame = +1
Query: 25 IGGRGLQLSAPPISAGFRQYPP--------LVCALTKQGHRFLSSLATT-DEPSAATGLL 177
+GG G + ++ +R PP + CALTKQG RFL+ LA PS A L+
Sbjct: 1 MGGLGSAQLSFSVALPWRHDPPQHSKLSLQIQCALTKQGQRFLTKLAANAGNPSVANKLI 60
Query: 178 RKFVASSSKHVAXXXXXXXXXXXXXDPRLSSLAFPLYSMIKRESWFCWNAKLV 336
KF+++S K A P LSSLA P+YS I SWF WN KLV
Sbjct: 61 SKFLSTSPKSTALTTLSYLLSPHTAHPHLSSLALPMYSKITEASWFEWNPKLV 113
>gb|EMJ01929.1| hypothetical protein PRUPE_ppa021547mg [Prunus persica]
Length = 447
Score = 69.7 bits (169), Expect = 4e-10
Identities = 40/95 (42%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +1
Query: 55 PPISAGFRQYPPLVCALTKQGHRFLSSLATTDEPSAATG-LLRKFVASSSKHVAXXXXXX 231
PP+++ P+ CA+TKQG RFL+ LA + T L+ KF+ SS+K +A
Sbjct: 24 PPLTS------PIQCAVTKQGQRFLTKLAANARDAKVTNKLIAKFLTSSTKSIALNTLSY 77
Query: 232 XXXXXXXDPRLSSLAFPLYSMIKRESWFCWNAKLV 336
P LSSLA P YS I SWF WN KLV
Sbjct: 78 LLSPDTTLPHLSSLALPFYSKITEASWFEWNPKLV 112
>ref|XP_006409357.1| hypothetical protein EUTSA_v10022675mg [Eutrema salsugineum]
gi|557110519|gb|ESQ50810.1| hypothetical protein
EUTSA_v10022675mg [Eutrema salsugineum]
Length = 469
Score = 63.5 bits (153), Expect = 3e-08
Identities = 37/81 (45%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = +1
Query: 103 LTKQGHRFLSSL---ATTDEPSAATGLLRKFVASSSKHVAXXXXXXXXXXXXXDPRLSSL 273
L KQGHRFLSSL A +PSA ++KFVA+S K V+ P LS
Sbjct: 53 LMKQGHRFLSSLSSPALAGDPSATNRHIKKFVAASPKSVSLNVLSHLLSAQTSHPHLSFF 112
Query: 274 AFPLYSMIKRESWFCWNAKLV 336
A LYS I SWF WN KL+
Sbjct: 113 ALSLYSEITEASWFDWNPKLI 133
>ref|XP_002521239.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539507|gb|EEF41095.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 460
Score = 62.8 bits (151), Expect = 5e-08
Identities = 40/82 (48%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +1
Query: 100 ALTKQGHRFLSSLA--TTDEPSAATG-LLRKFVASSSKHVAXXXXXXXXXXXXXDPRLSS 270
AL+KQG RFLSSLA TT + AT L++KFVA+S K +A LSS
Sbjct: 44 ALSKQGQRFLSSLAIATTKGDTVATNRLIKKFVAASPKSIALDALSHLLNPHSSHSHLSS 103
Query: 271 LAFPLYSMIKRESWFCWNAKLV 336
LAF LY I WF WN KLV
Sbjct: 104 LAFTLYLKIAEARWFQWNPKLV 125
>gb|EXB24044.1| hypothetical protein L484_006076 [Morus notabilis]
Length = 517
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +1
Query: 97 CALTKQGHRFLSSLA-TTDEPSAATGLLRKFVASSSKHVAXXXXXXXXXXXXXDPRLSSL 273
CALTKQGHRFLS+L+ SAA L+ KFVASS K ++ L+S
Sbjct: 102 CALTKQGHRFLSTLSINAGNASAANKLIGKFVASSPKSISLNALSHLLSPDTTHTHLTSH 161
Query: 274 AFPLYSMIKRESWFCWNAKLV 336
+ LYS I+ SWF ++ KLV
Sbjct: 162 SLHLYSKIREASWFVYSPKLV 182
>ref|XP_006297442.1| hypothetical protein CARUB_v10013465mg [Capsella rubella]
gi|482566151|gb|EOA30340.1| hypothetical protein
CARUB_v10013465mg [Capsella rubella]
Length = 516
Score = 60.1 bits (144), Expect = 3e-07
Identities = 36/81 (44%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +1
Query: 103 LTKQGHRFLSSL---ATTDEPSAATGLLRKFVASSSKHVAXXXXXXXXXXXXXDPRLSSL 273
L KQGH+FLSSL A +P A L++KFVA+S K VA P LS
Sbjct: 99 LMKQGHQFLSSLSSPALAGDPPATNRLIKKFVAASPKSVALNVLSHLLSDNTSHPHLSYF 158
Query: 274 AFPLYSMIKRESWFCWNAKLV 336
A LY I SWF WN KL+
Sbjct: 159 APQLYLEITEASWFDWNPKLI 179
>ref|XP_003592666.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481714|gb|AES62917.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 454
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/76 (43%), Positives = 40/76 (52%)
Frame = +1
Query: 97 CALTKQGHRFLSSLATTDEPSAATGLLRKFVASSSKHVAXXXXXXXXXXXXXDPRLSSLA 276
C LTKQG RFL+ L+TT+ + L+RKFV SS K V LSSLA
Sbjct: 42 CTLTKQGQRFLTKLSTTN--TNTENLIRKFVQSSPKSVLLSTLTHLLSPTTAHHPLSSLA 99
Query: 277 FPLYSMIKRESWFCWN 324
PLY+ I W+ WN
Sbjct: 100 LPLYTRISESQWYTWN 115
>ref|NP_849962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75244359|sp|Q8GWA9.1|PP157_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g17033 gi|26452937|dbj|BAC43545.1| unknown protein
[Arabidopsis thaliana] gi|330251482|gb|AEC06576.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 505
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/81 (44%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +1
Query: 103 LTKQGHRFLSSL---ATTDEPSAATGLLRKFVASSSKHVAXXXXXXXXXXXXXDPRLSSL 273
L K G RFLSSL A +PSA ++KFVA+S K VA P LS
Sbjct: 89 LMKHGDRFLSSLSSPALAGDPSAINRHIKKFVAASPKSVALNVLSHLLSDQTSHPHLSFF 148
Query: 274 AFPLYSMIKRESWFCWNAKLV 336
A LYS I SWF WN KL+
Sbjct: 149 ALSLYSEITEASWFDWNPKLI 169
>ref|XP_002884032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297329872|gb|EFH60291.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 504
Score = 58.9 bits (141), Expect = 7e-07
Identities = 37/84 (44%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Frame = +1
Query: 94 VCALTKQGHRFLSSL---ATTDEPSAATGLLRKFVASSSKHVAXXXXXXXXXXXXXDPRL 264
V L KQG RFLSSL A +PSA ++KFVA+S K V P L
Sbjct: 85 VVPLMKQGDRFLSSLSSPALAGDPSATHRHIKKFVAASPKSVTLNVLSHLLSDQTSYPHL 144
Query: 265 SSLAFPLYSMIKRESWFCWNAKLV 336
S A LYS I SWF WN KL+
Sbjct: 145 SFFALSLYSEITEASWFDWNPKLI 168
>dbj|BAF01049.1| hypothetical protein [Arabidopsis thaliana]
Length = 501
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/81 (44%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +1
Query: 103 LTKQGHRFLSSL---ATTDEPSAATGLLRKFVASSSKHVAXXXXXXXXXXXXXDPRLSSL 273
L K G RFLSSL A +PSA ++KFVA+S K VA P LS
Sbjct: 85 LMKHGDRFLSSLSSPALAGDPSAINRHIKKFVAASPKSVALNVLSHLLSDQTSHPHLSFF 144
Query: 274 AFPLYSMIKRESWFCWNAKLV 336
A LYS I SWF WN KL+
Sbjct: 145 ALSLYSEITEASWFDWNPKLI 165
>ref|NP_565402.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|13877877|gb|AAK44016.1|AF370201_1 unknown protein
[Arabidopsis thaliana] gi|21280879|gb|AAM44931.1|
unknown protein [Arabidopsis thaliana]
gi|330251481|gb|AEC06575.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/81 (44%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +1
Query: 103 LTKQGHRFLSSL---ATTDEPSAATGLLRKFVASSSKHVAXXXXXXXXXXXXXDPRLSSL 273
L K G RFLSSL A +PSA ++KFVA+S K VA P LS
Sbjct: 88 LMKHGDRFLSSLSSPALAGDPSAINRHIKKFVAASPKSVALNVLSHLLSDQTSHPHLSFF 147
Query: 274 AFPLYSMIKRESWFCWNAKLV 336
A LYS I SWF WN KL+
Sbjct: 148 ALSLYSEITEASWFDWNPKLI 168