BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00021792
         (2028 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi...   712   0.0  
gb|EMJ01512.1| hypothetical protein PRUPE_ppa001249mg [Prunus pe...   695   0.0  
ref|XP_006384843.1| hypothetical protein POPTR_0004s21560g [Popu...   689   0.0  
gb|EOX97443.1| Pentatricopeptide repeat (PPR) superfamily protei...   683   0.0  
gb|EOX97442.1| Pentatricopeptide repeat (PPR) superfamily protei...   683   0.0  
ref|XP_006350361.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   682   0.0  
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,...   677   0.0  
ref|XP_004290060.1| PREDICTED: pentatricopeptide repeat-containi...   664   0.0  
ref|XP_004231526.1| PREDICTED: pentatricopeptide repeat-containi...   654   0.0  
ref|XP_006422433.1| hypothetical protein CICLE_v10027787mg [Citr...   652   0.0  
ref|XP_006486600.1| PREDICTED: pentatricopeptide repeat-containi...   651   0.0  
ref|XP_002328265.1| predicted protein [Populus trichocarpa]           642   0.0  
ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containi...   635   e-179
ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containi...   635   e-179
ref|NP_179305.2| pentatricopeptide repeat-containing protein [Ar...   632   e-178
ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. l...   625   e-176
ref|XP_006409347.1| hypothetical protein EUTSA_v10022542mg [Eutr...   625   e-176
gb|EXC31542.1| hypothetical protein L484_006574 [Morus notabilis]     622   e-175
ref|XP_006296960.1| hypothetical protein CARUB_v10012952mg, part...   622   e-175
ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containi...   620   e-175

>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
            [Vitis vinifera] gi|297744485|emb|CBI37747.3| unnamed
            protein product [Vitis vinifera]
          Length = 878

 Score =  712 bits (1837), Expect = 0.0
 Identities = 336/522 (64%), Positives = 424/522 (81%), Gaps = 2/522 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M D G +PN YS+N ++DGLCKNG+++DAR ++GLMIS+GI PD  TYSTLL G C  
Sbjct: 354  KEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCST 413

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
             K ++AN +L+EM+R GC PNTYTCNILLHSLW+EG + EAE L+QKMNER   LD V+C
Sbjct: 414  GKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTC 473

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDE--NRKRCLPDLITYST 536
            NIVIDGLC+SGKLD+AVEIV  MW HGSAALGNLGN +IGLVD   N K+CLPDLITYS 
Sbjct: 474  NIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSI 533

Query: 537  VINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKG 716
            +INGLC+ GRL+EA+KKFIEM+G++L+PDS +YD F+++ CK GKISSAF+VLKDME++G
Sbjct: 534  IINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRG 593

Query: 717  CNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAA 896
            CNK+LQTYN LI GLGS NQIFE++GL+D+MKE+G++PN+ TYN +++ LCEG + ++A 
Sbjct: 594  CNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDAT 653

Query: 897  FLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELL 1076
             LLDEMLQ+GI+PNI SF+LLIK FC+  +F   K+VFEIA+S+ GH+E LYSLMFNELL
Sbjct: 654  SLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELL 713

Query: 1077 AGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPA 1256
             GGE+ EAK+LF+AALDR FDL +F Y DLI +LC +E  + A DIL KM+  G +FDPA
Sbjct: 714  IGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPA 773

Query: 1257 LFMPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQT 1436
             FMPVID LG RGKKH+ +EL ERM+ M+SE  +ENK+ R++   N  ++ K  GSDWQT
Sbjct: 774  SFMPVIDGLGKRGKKHDADELAERMMDMASEGMVENKITRNESAFNRQKRNKFSGSDWQT 833

Query: 1437 ILHRDDGSAIAMKTLKRVQKGWGQGNLSYFQAQRNDFLDDWD 1562
            I+HRDDGS +A+K LKRVQKGWGQG++S  Q Q+NDFLD W+
Sbjct: 834  IIHRDDGSGLALKALKRVQKGWGQGSISSLQPQKNDFLDYWE 875



 Score =  183 bits (465), Expect = 2e-43
 Identities = 139/485 (28%), Positives = 225/485 (46%), Gaps = 42/485 (8%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M   G  P  Y+ N+LI GLC +G   DAR V   M   G  P+  ++  L++GYCR 
Sbjct: 140  KDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRA 199

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
               + A ++L+ M   G  PN    N L+ S  REG   EAE L+++M E G   D+V+ 
Sbjct: 200  GLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTF 259

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLG----NLYI------GLVDE------ 494
            N  I  LC +GK+ +A  I  +M       L        NL +      G+++E      
Sbjct: 260  NSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVE 319

Query: 495  --NRKRCLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRG 668
               R   L +L +Y+  + GL R+G+L EA+    EM+ + + P+   ++  +  LCK G
Sbjct: 320  SMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNG 379

Query: 669  KISSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYN 848
             IS A  ++  M   G      TY+ L+ G  ST ++ +   ++ EM  RG SPN YT N
Sbjct: 380  LISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCN 439

Query: 849  IVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFE----- 1013
            I+L+SL +  +  EA  LL +M +R    +  +  ++I   C++G+   A ++ E     
Sbjct: 440  ILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIH 499

Query: 1014 --IAISVYGH-----------------EEVLYSLMFNELLAGGEILEAKQLFEAALDRFF 1136
               A+   G+                 + + YS++ N L   G + EA++ F   + +  
Sbjct: 500  GSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSL 559

Query: 1137 DLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNE 1316
              +S  Y   I+  C       A  +LK M + GC      +  +I  LG++ +  E+  
Sbjct: 560  HPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYG 619

Query: 1317 LTERM 1331
            L + M
Sbjct: 620  LLDDM 624



 Score =  157 bits (398), Expect = 1e-35
 Identities = 114/404 (28%), Positives = 186/404 (46%), Gaps = 5/404 (1%)
 Frame = +3

Query: 135  PDVATYSTLLQGYCRKRKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEML 314
            P V  Y+ +L+   R+ K    + +  +M+  G  P TYT N+L+  L   G   +A  +
Sbjct: 114  PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 315  MQKMNERGDGLDIVSCNIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDE 494
              KM  +G   +  S  I++ G CR+G   +A+E++  M + G                 
Sbjct: 174  FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFG----------------- 216

Query: 495  NRKRCLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKI 674
                  P+ + Y+T+I+  CR+GR EEA++    M    L+PD   ++  +  LC  GKI
Sbjct: 217  ----VQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKI 272

Query: 675  SSAFQVLKDM---ERKGCNK-TLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYT 842
              A ++ +DM   E  G  +  + T+N ++ G      + E   L++ MK  G    + +
Sbjct: 273  LEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELES 332

Query: 843  YNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAI 1022
            YNI L  L    K  EA   L EM+ +GI PNIYSF  ++   C+ G    A+ +  + I
Sbjct: 333  YNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMI 392

Query: 1023 SV-YGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFD 1199
            S   G + V YS + +   + G++L+A  +    + R    N++    L++ L  E    
Sbjct: 393  SSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIF 452

Query: 1200 YARDILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELTERM 1331
             A  +L+KM +     D      VID L   GK  E  E+ E M
Sbjct: 453  EAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGM 496



 Score = 91.7 bits (226), Expect = 1e-15
 Identities = 84/399 (21%), Positives = 162/399 (40%), Gaps = 41/399 (10%)
 Frame = +3

Query: 261  ILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSCNIVIDGLCRSGKLDKAVEIVSEMWTH 440
            I+ H L R   +++ + L Q + ++   +  VS   +I  L +SG  D A    S+  + 
Sbjct: 49   IITHILIRAKMISQIDHLQQLLLQQPQEVSHVSLIALIRILAKSGLSDLAF---SQFQSF 105

Query: 441  GSAALGNLGNLYIGLVDENRKRCLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYP 620
             S    N   +Y+                Y+ V+    R+ +++     + +M+   + P
Sbjct: 106  RSQVPANPPPVYL----------------YNMVLESSLREDKVDSFSWLYKDMVVAGVSP 149

Query: 621  DSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLM 800
            ++   ++ +  LC  G+   A +V   M  KGC     ++  L+ G            L+
Sbjct: 150  ETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELL 209

Query: 801  DEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQRGI----------------- 929
            D M   GV PN   YN +++S C   ++EEA  L++ M + G+                 
Sbjct: 210  DGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSA 269

Query: 930  ----------------------TPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGH-- 1037
                                   PNI +F L+++ FC+ G    AK + E ++   G+  
Sbjct: 270  GKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVE-SMKRNGNLM 328

Query: 1038 EEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDIL 1217
            E   Y++    L+  G++LEA+   +  +D+  + N + +  +++ LC       AR I+
Sbjct: 329  ELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIM 388

Query: 1218 KKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELTERML 1334
              M+  G   D   +  ++    + GK  + N +   M+
Sbjct: 389  GLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMM 427


>gb|EMJ01512.1| hypothetical protein PRUPE_ppa001249mg [Prunus persica]
          Length = 872

 Score =  695 bits (1793), Expect = 0.0
 Identities = 333/519 (64%), Positives = 420/519 (80%), Gaps = 2/519 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M D G +PN YSYNI+I+GLCKNGML DAR V+ LM+   ISPD  TYSTLL G+C K
Sbjct: 353  KEMVDKGIEPNIYSYNIVINGLCKNGMLRDARMVMTLMVRNNISPDTVTYSTLLHGFCNK 412

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
             K  EA+ +L+EM+   C PNT+TCNILLHSLW+EG  +EAE L+QKMNERG GLD V+C
Sbjct: 413  GKVFEASNILHEMMMNNCFPNTHTCNILLHSLWKEGRTSEAEELLQKMNERGYGLDTVTC 472

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDE--NRKRCLPDLITYST 536
            NIVIDGLC  GKLDKA+EIVS MWTHGSAALGNLGN +IGLVD+  N K+C+PDLITYST
Sbjct: 473  NIVIDGLCNDGKLDKAIEIVSGMWTHGSAALGNLGNSFIGLVDDSNNGKKCIPDLITYST 532

Query: 537  VINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKG 716
            +I+GLC+ GRL+EAKKKF+EM+G+NL+PDS +YD+F+ + CK+G+ISSAF+VLKDME+KG
Sbjct: 533  IISGLCKAGRLDEAKKKFMEMMGKNLHPDSVIYDMFINSFCKQGRISSAFRVLKDMEKKG 592

Query: 717  CNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAA 896
            CNK++QTYN L+ GLGS  QIFE++GLMDEM+ERGV+P+V TYN ++N LCEGE+ ++A 
Sbjct: 593  CNKSIQTYNSLVLGLGSKKQIFEIYGLMDEMRERGVTPDVCTYNYMMNCLCEGERVKDAT 652

Query: 897  FLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELL 1076
             LLDEMLQ+GI+PNI +F++LIK FC+  +F    +VF+IA+SV GH+EVLYSLMFNELL
Sbjct: 653  SLLDEMLQKGISPNISTFRILIKAFCKACDFGVTHEVFDIALSVCGHKEVLYSLMFNELL 712

Query: 1077 AGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPA 1256
            AGGEIL+AK LFE ALDR+F L +F YKDLI+RLC +E  + A  IL  M   G  FDPA
Sbjct: 713  AGGEILKAKALFEVALDRYFYLGNFLYKDLIDRLCKDEKLEDASSILHTMKNKGYGFDPA 772

Query: 1257 LFMPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQT 1436
             F+PVID L  RG K E +EL E M+ M SE ++ +KV R ++++  G+   +GGSDWQT
Sbjct: 773  SFLPVIDGLSKRGNKQEADELAEAMMDMESEGRVGDKVYRIEREIIGGKPSNNGGSDWQT 832

Query: 1437 ILHRDDGSAIAMKTLKRVQKGWGQGNLSYFQAQRNDFLD 1553
            I+HRDDGS IA+KTLKRVQKGWG+G+L+  Q+Q+N+F+D
Sbjct: 833  IVHRDDGSGIALKTLKRVQKGWGRGSLTSLQSQKNEFID 871



 Score =  174 bits (441), Expect = 1e-40
 Identities = 121/461 (26%), Positives = 210/461 (45%), Gaps = 20/461 (4%)
 Frame = +3

Query: 9    MADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRKRK 188
            M + G QPN YS  IL+ G C+ G+      V+  M S  + P+   Y+TL+  +C++ K
Sbjct: 176  MREKGCQPNEYSVGILVRGYCRAGLAVRGLEVLDQMRSCNLLPNRVVYNTLISSFCKQSK 235

Query: 189  KVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMN-ERGDGL---DIV 356
              +A K++  M   G LP+  T N  + +L   G + EA  + + M+ ++  GL   ++V
Sbjct: 236  TDDAEKLVERMREDGMLPDAVTFNSRISALCSAGKILEASRIFRDMHIDQEMGLPQPNVV 295

Query: 357  SCNIVIDGLCRSGKLDKAVEIVSEM--------------WTHGSAALGNLGNLYIGLVDE 494
            + N+++ G CR   L++A  +   M              W  G    G L    + L + 
Sbjct: 296  TYNLMLQGFCREDMLEEAENLFKSMEKAGNFINLESYNIWLLGLVKNGKLLEARLVLKEM 355

Query: 495  NRKRCLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKI 674
              K   P++ +Y+ VINGLC++G L +A+     M+  N+ PD+  Y   L+  C +GK+
Sbjct: 356  VDKGIEPNIYSYNIVINGLCKNGMLRDARMVMTLMVRNNISPDTVTYSTLLHGFCNKGKV 415

Query: 675  SSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIV 854
              A  +L +M    C     T N L+  L    +  E   L+ +M ERG   +  T NIV
Sbjct: 416  FEASNILHEMMMNNCFPNTHTCNILLHSLWKEGRTSEAEELLQKMNERGYGLDTVTCNIV 475

Query: 855  LNSLCEGEKSEEAAFLLDEMLQRGITP--NIYSFKLLIKTFCRTGEFRPAKDVFEIAISV 1028
            ++ LC   K ++A  ++  M   G     N+ +  + +      G+    K + ++    
Sbjct: 476  IDGLCNDGKLDKAIEIVSGMWTHGSAALGNLGNSFIGLVDDSNNGK----KCIPDL---- 527

Query: 1029 YGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYAR 1208
                 + YS + + L   G + EAK+ F   + +    +S  Y   IN  C +     A 
Sbjct: 528  -----ITYSTIISGLCKAGRLDEAKKKFMEMMGKNLHPDSVIYDMFINSFCKQGRISSAF 582

Query: 1209 DILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELTERM 1331
             +LK M + GC      +  ++  LG++ +  E+  L + M
Sbjct: 583  RVLKDMEKKGCNKSIQTYNSLVLGLGSKKQIFEIYGLMDEM 623



 Score =  167 bits (422), Expect = 2e-38
 Identities = 107/370 (28%), Positives = 183/370 (49%), Gaps = 1/370 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M   G +P  Y++N+LI  LC++  L DAR V   M   G  P+  +   L++GYCR 
Sbjct: 139  KDMIVSGMKPETYTFNLLICSLCESDRLDDAREVFDKMREKGCQPNEYSVGILVRGYCRA 198

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
               V   +VL++M     LPN    N L+ S  ++    +AE L+++M E G   D V+ 
Sbjct: 199  GLAVRGLEVLDQMRSCNLLPNRVVYNTLISSFCKQSKTDDAEKLVERMREDGMLPDAVTF 258

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYSTVI 542
            N  I  LC +GK+ +A  I  +M                  +D+      P+++TY+ ++
Sbjct: 259  NSRISALCSAGKILEASRIFRDMH-----------------IDQEMGLPQPNVVTYNLML 301

Query: 543  NGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCN 722
             G CR+  LEEA+  F  M     + +   Y+I+L  L K GK+  A  VLK+M  KG  
Sbjct: 302  QGFCREDMLEEAENLFKSMEKAGNFINLESYNIWLLGLVKNGKLLEARLVLKEMVDKGIE 361

Query: 723  KTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFL 902
              + +YN +I GL     + +   +M  M    +SP+  TY+ +L+  C   K  EA+ +
Sbjct: 362  PNIYSYNIVINGLCKNGMLRDARMVMTLMVRNNISPDTVTYSTLLHGFCNKGKVFEASNI 421

Query: 903  LDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFE-IAISVYGHEEVLYSLMFNELLA 1079
            L EM+     PN ++  +L+ +  + G    A+++ + +    YG + V  +++ + L  
Sbjct: 422  LHEMMMNNCFPNTHTCNILLHSLWKEGRTSEAEELLQKMNERGYGLDTVTCNIVIDGLCN 481

Query: 1080 GGEILEAKQL 1109
             G++ +A ++
Sbjct: 482  DGKLDKAIEI 491



 Score =  148 bits (374), Expect = 8e-33
 Identities = 98/383 (25%), Positives = 189/383 (49%), Gaps = 19/383 (4%)
 Frame = +3

Query: 135  PDVATYSTLLQGYCRKRKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEML 314
            P V  Y+ L++   R++       +  +MI  G  P TYT N+L+ SL     + +A  +
Sbjct: 113  PSVYLYNLLVESSLREKHVDFVLWLYKDMIVSGMKPETYTFNLLICSLCESDRLDDAREV 172

Query: 315  MQKMNERGDGLDIVSCNIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIG---- 482
              KM E+G   +  S  I++ G CR+G   + +E++ +M +        + N  I     
Sbjct: 173  FDKMREKGCQPNEYSVGILVRGYCRAGLAVRGLEVLDQMRSCNLLPNRVVYNTLISSFCK 232

Query: 483  ---------LVDENRK-RCLPDLITYSTVINGLCRDGRLEEAKKKFIEM-LGRNL---YP 620
                     LV+  R+   LPD +T+++ I+ LC  G++ EA + F +M + + +    P
Sbjct: 233  QSKTDDAEKLVERMREDGMLPDAVTFNSRISALCSAGKILEASRIFRDMHIDQEMGLPQP 292

Query: 621  DSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLM 800
            +   Y++ L   C+   +  A  + K ME+ G    L++YN  + GL    ++ E   ++
Sbjct: 293  NVVTYNLMLQGFCREDMLEEAENLFKSMEKAGNFINLESYNIWLLGLVKNGKLLEARLVL 352

Query: 801  DEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRT 980
             EM ++G+ PN+Y+YNIV+N LC+     +A  ++  M++  I+P+  ++  L+  FC  
Sbjct: 353  KEMVDKGIEPNIYSYNIVINGLCKNGMLRDARMVMTLMVRNNISPDTVTYSTLLHGFCNK 412

Query: 981  GE-FRPAKDVFEIAISVYGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCY 1157
            G+ F  +  + E+ ++         +++ + L   G   EA++L +   +R + L++   
Sbjct: 413  GKVFEASNILHEMMMNNCFPNTHTCNILLHSLWKEGRTSEAEELLQKMNERGYGLDTVTC 472

Query: 1158 KDLINRLCVEENFDYARDILKKM 1226
              +I+ LC +   D A +I+  M
Sbjct: 473  NIVIDGLCNDGKLDKAIEIVSGM 495



 Score = 90.1 bits (222), Expect = 3e-15
 Identities = 59/314 (18%), Positives = 131/314 (41%), Gaps = 40/314 (12%)
 Frame = +3

Query: 513  PDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQV 692
            P +  Y+ ++    R+  ++     + +M+   + P++  +++ + +LC+  ++  A +V
Sbjct: 113  PSVYLYNLLVESSLREKHVDFVLWLYKDMIVSGMKPETYTFNLLICSLCESDRLDDAREV 172

Query: 693  LKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCE 872
               M  KGC     +   L+ G            ++D+M+   + PN   YN +++S C+
Sbjct: 173  FDKMREKGCQPNEYSVGILVRGYCRAGLAVRGLEVLDQMRSCNLLPNRVVYNTLISSFCK 232

Query: 873  GEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVF-------------- 1010
              K+++A  L++ M + G+ P+  +F   I   C  G+   A  +F              
Sbjct: 233  QSKTDDAEKLVERMREDGMLPDAVTFNSRISALCSAGKILEASRIFRDMHIDQEMGLPQP 292

Query: 1011 -----EIAISVYGHEEVL---------------------YSLMFNELLAGGEILEAKQLF 1112
                  + +  +  E++L                     Y++    L+  G++LEA+ + 
Sbjct: 293  NVVTYNLMLQGFCREDMLEEAENLFKSMEKAGNFINLESYNIWLLGLVKNGKLLEARLVL 352

Query: 1113 EAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPALFMPVIDYLGTR 1292
            +  +D+  + N + Y  +IN LC       AR ++  MV+     D   +  ++     +
Sbjct: 353  KEMVDKGIEPNIYSYNIVINGLCKNGMLRDARMVMTLMVRNNISPDTVTYSTLLHGFCNK 412

Query: 1293 GKKHEVNELTERML 1334
            GK  E + +   M+
Sbjct: 413  GKVFEASNILHEMM 426


>ref|XP_006384843.1| hypothetical protein POPTR_0004s21560g [Populus trichocarpa]
            gi|550341611|gb|ERP62640.1| hypothetical protein
            POPTR_0004s21560g [Populus trichocarpa]
          Length = 874

 Score =  689 bits (1778), Expect = 0.0
 Identities = 330/522 (63%), Positives = 419/522 (80%), Gaps = 2/522 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M D G +PN YSYNI++DGLCKNG+L DAR ++ LM S+G+ PD  TY+TLL GYC  
Sbjct: 350  KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 409

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
             K  EAN VL EM+R GC PN YTCNILL+SLW+EG ++EAE L+QKMNE+G  +D V+C
Sbjct: 410  GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTC 469

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDEN--RKRCLPDLITYST 536
            NIVIDGLC +GKLDKA+EIV+ MWTHGSAALGNLGN YIGLVD++  RK+C+PDLI+YST
Sbjct: 470  NIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYST 529

Query: 537  VINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKG 716
            +I+GLC+ GR+ EAKKKFIEM+G+NL PDS +YD+F+++ CK GKISSAF+VLKDME+KG
Sbjct: 530  IISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKG 589

Query: 717  CNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAA 896
            CNKTLQTYN LI GLGS NQIFE++GL+DEM+ERGVSP+V  YN VL+SLCEG + ++A 
Sbjct: 590  CNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAP 649

Query: 897  FLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELL 1076
             +LDEMLQ+GI+PNI SF +LIK FC+  +F    ++FEIA++V GH+E LYSL FNELL
Sbjct: 650  SVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELL 709

Query: 1077 AGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPA 1256
             GGE+++AK+LFE ALDR FD+ +F YKDLI+ LC +E  D A  IL K++  G  FDPA
Sbjct: 710  VGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPA 769

Query: 1257 LFMPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQT 1436
             FMPVID LG RG KHE +EL E+M+ M+SE +++NKV ++      G++ KDG S+WQT
Sbjct: 770  SFMPVIDGLGKRGNKHEADELAEKMMEMASEGKVKNKVHQNASCSIQGKKNKDGESEWQT 829

Query: 1437 ILHRDDGSAIAMKTLKRVQKGWGQGNLSYFQAQRNDFLDDWD 1562
            ILHRDDGS IA+K LKRVQ+G  QG++S  + Q++DFLD W+
Sbjct: 830  ILHRDDGSGIALKALKRVQRGLDQGSISSLEPQKDDFLDYWE 871



 Score =  172 bits (437), Expect = 4e-40
 Identities = 107/337 (31%), Positives = 169/337 (50%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M   G  P  Y++N+LI  LC +G L DAR +   M   G  P+  ++  L++GYCR 
Sbjct: 136  KDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRA 195

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
                +  ++L EM R G  PN    N L+ S  +EG   +AE L+ +M + G   D+V+ 
Sbjct: 196  GFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTF 255

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYSTVI 542
            N  I  LC SGK+ +A  I  +M                  +DE      P++ITY+ ++
Sbjct: 256  NARISALCSSGKVLEASRIFRDMQ-----------------IDEVLGLPQPNIITYNLML 298

Query: 543  NGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCN 722
             G C++G LEEA+  F +M       +   Y+I+L  L + GK+  A  VLK+M   G  
Sbjct: 299  GGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGME 358

Query: 723  KTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFL 902
              + +YN ++ GL     +F+   LM  M   GV P+  TY  +L+  C   K  EA  +
Sbjct: 359  PNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNV 418

Query: 903  LDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFE 1013
            L EM++ G +PN Y+  +L+ +  + G    A+++ +
Sbjct: 419  LREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQ 455



 Score =  147 bits (370), Expect = 2e-32
 Identities = 108/385 (28%), Positives = 185/385 (48%), Gaps = 21/385 (5%)
 Frame = +3

Query: 135  PDVATYSTLLQGYCRKRKKVEANKVL-NEMIRGGCLPNTYTCNILLHSLWREGNVTEAEM 311
            P +  Y+ LL+  C K  +V+    L  +M+  G  P TYT N+L+  L   G + +A  
Sbjct: 110  PSIYLYNVLLRS-CTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARE 168

Query: 312  LMQKMNERGDGLDIVSCNIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIG--- 482
            L  KM E+G   +  S  I++ G CR+G   K +E++ EM   G +    + N  I    
Sbjct: 169  LFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFC 228

Query: 483  ----------LVDENRKRCL-PDLITYSTVINGLCRDGRLEEAKKKFIEM-----LGRNL 614
                      LVDE RK  L PD++T++  I+ LC  G++ EA + F +M     LG   
Sbjct: 229  KEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLP- 287

Query: 615  YPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFG 794
             P+   Y++ L   CK G +  A  + + M+        ++YN  + GL    ++ E   
Sbjct: 288  QPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQL 347

Query: 795  LMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFC 974
            ++ EM + G+ PNVY+YNIV++ LC+     +A  L+  M   G+ P+  ++  L+  +C
Sbjct: 348  VLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYC 407

Query: 975  RTGEFRPAKDVF-EIAISVYGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSF 1151
             TG+   A +V  E+            +++   L   G I EA++L +   ++ + +++ 
Sbjct: 408  HTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTV 467

Query: 1152 CYKDLINRLCVEENFDYARDILKKM 1226
                +I+ LC     D A +I+  M
Sbjct: 468  TCNIVIDGLCNNGKLDKAIEIVNGM 492



 Score = 95.1 bits (235), Expect = 1e-16
 Identities = 68/281 (24%), Positives = 130/281 (46%), Gaps = 8/281 (2%)
 Frame = +3

Query: 513  PDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQV 692
            P +  Y+ ++    ++GR++       +M+   + P++  +++ +  LC  G +  A ++
Sbjct: 110  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 169

Query: 693  LKDMERKGCNKTLQTYNCLIFGL---GSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNS 863
               M  KGC     ++  L+ G    G T++  E+ G   EM+  G SPN   YN +++S
Sbjct: 170  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLG---EMRRLGFSPNKVVYNTLISS 226

Query: 864  LCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVF-----EIAISV 1028
             C+  K+++A  L+DEM + G++P++ +F   I   C +G+   A  +F     +  + +
Sbjct: 227  FCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGL 286

Query: 1029 YGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYAR 1208
                 + Y+LM       G + EA+ LFE        +N   Y   +  L        A+
Sbjct: 287  PQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQ 346

Query: 1209 DILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELTERM 1331
             +LK+MV +G + +   +  V+D L   G   +   L   M
Sbjct: 347  LVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLM 387


>gb|EOX97443.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
            [Theobroma cacao]
          Length = 632

 Score =  683 bits (1763), Expect = 0.0
 Identities = 321/522 (61%), Positives = 415/522 (79%), Gaps = 2/522 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M   G +PN YSYN+++DGLCKNGML+DAR V+G +IS+G+SPD  T+STLL GYC K
Sbjct: 108  KDMIYKGVEPNIYSYNVVMDGLCKNGMLSDARMVMGFIISSGLSPDTVTFSTLLHGYCCK 167

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
             +   AN +L+EM+R GC PNTYTCNILLHSLW+EG ++EAE L+QKMNE+G G+D V+C
Sbjct: 168  GRLYAANSILHEMMRNGCFPNTYTCNILLHSLWKEGKISEAEDLLQKMNEKGYGVDTVTC 227

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDE--NRKRCLPDLITYST 536
            NIVIDGLC+SGKLDKA+EI +EMWTHGSAALGNLGN +IGLVD+  + K+C+PDL+TYS 
Sbjct: 228  NIVIDGLCKSGKLDKAMEIGNEMWTHGSAALGNLGNSFIGLVDDANSSKQCIPDLVTYSI 287

Query: 537  VINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKG 716
            +I+ LC+ GRL+EAKKKF EM+G+NL PDS ++DIF++  CK GKISSAF+VLKDME+KG
Sbjct: 288  IISALCKAGRLDEAKKKFKEMMGKNLQPDSVIFDIFIHIFCKEGKISSAFRVLKDMEKKG 347

Query: 717  CNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAA 896
            CNK+LQTYN LI GLGS NQIFE++GL+DEM+ERG++PNV TYN ++  LCE  K ++  
Sbjct: 348  CNKSLQTYNSLILGLGSKNQIFEIYGLVDEMRERGITPNVCTYNNIIRCLCENGKMQDTT 407

Query: 897  FLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELL 1076
             +LDEMLQ+GI PNI SF++LI+ FC+  +F  A+++FEIA+S+ GH+E LY LMFNELL
Sbjct: 408  SILDEMLQKGINPNISSFRMLIEAFCKACDFGVAQELFEIALSICGHKEALYKLMFNELL 467

Query: 1077 AGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPA 1256
             GG++ EAK +FEAAL R F L  F YKDLI +LC ++  + A  IL KM+  G KFDPA
Sbjct: 468  VGGQLSEAKLVFEAALYRSFHLGGFLYKDLIEKLCKDKKLEEASRILHKMINKGYKFDPA 527

Query: 1257 LFMPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQT 1436
             FMPV+D LG RG KHE +EL E+M+ M+S+ ++ NK+  + ++  H ++ K GG DWQT
Sbjct: 528  TFMPVVDELGKRGNKHEADELAEKMMEMASDGRVGNKIYLNAREPIHRKEIKFGGDDWQT 587

Query: 1437 ILHRDDGSAIAMKTLKRVQKGWGQGNLSYFQAQRNDFLDDWD 1562
            I+HRDDGS IA+K LKRVQKGWGQG++S  Q  +N F D W+
Sbjct: 588  IVHRDDGSGIALKALKRVQKGWGQGSISRLQPHKNKFHDYWE 629



 Score =  160 bits (405), Expect = 2e-36
 Identities = 120/454 (26%), Positives = 215/454 (47%), Gaps = 31/454 (6%)
 Frame = +3

Query: 9    MADDGPQPNAYSYNILIDGLCKNGMLADARRV---VGLMISAGI-SPDVATYSTLLQGYC 176
            M +DG  P+  ++N  I  LC+ G + +A R+   + +    G+  P+V TY+ +L+G+C
Sbjct: 1    MREDGLFPDVVTFNSRISALCRAGKILEASRIFRDMQMDEELGLPRPNVITYNLMLEGFC 60

Query: 177  RKRKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIV 356
            ++    EA  ++  M + G L N  + NI L  L R   + EA+++++ M  +G   +I 
Sbjct: 61   KQGMLEEAKTLVESMEKKGDLMNLESYNIWLLGLLRNAKLVEAQLVLKDMIYKGVEPNIY 120

Query: 357  SCNIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYST 536
            S N+V+DGLC++G L  A  ++  + + G +                     PD +T+ST
Sbjct: 121  SYNVVMDGLCKNGMLSDARMVMGFIISSGLS---------------------PDTVTFST 159

Query: 537  VINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKG 716
            +++G C  GRL  A     EM+    +P++   +I L++L K GKIS A  +L+ M  KG
Sbjct: 160  LLHGYCCKGRLYAANSILHEMMRNGCFPNTYTCNILLHSLWKEGKISEAEDLLQKMNEKG 219

Query: 717  CNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVS----------------------- 827
                  T N +I GL  + ++ +   + +EM   G +                       
Sbjct: 220  YGVDTVTCNIVIDGLCKSGKLDKAMEIGNEMWTHGSAALGNLGNSFIGLVDDANSSKQCI 279

Query: 828  PNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDV 1007
            P++ TY+I++++LC+  + +EA     EM+ + + P+   F + I  FC+ G+   A  V
Sbjct: 280  PDLVTYSIIISALCKAGRLDEAKKKFKEMMGKNLQPDSVIFDIFIHIFCKEGKISSAFRV 339

Query: 1008 FEIAISVYGHEEVLYSLMFNELLAG----GEILEAKQLFEAALDRFFDLNSFCYKDLINR 1175
             +  +   G  + L +  +N L+ G     +I E   L +   +R    N   Y ++I  
Sbjct: 340  LK-DMEKKGCNKSLQT--YNSLILGLGSKNQIFEIYGLVDEMRERGITPNVCTYNNIIRC 396

Query: 1176 LCVEENFDYARDILKKMVQIGCKFDPALFMPVID 1277
            LC          IL +M+Q G   + + F  +I+
Sbjct: 397  LCENGKMQDTTSILDEMLQKGINPNISSFRMLIE 430



 Score =  107 bits (267), Expect = 2e-20
 Identities = 92/348 (26%), Positives = 156/348 (44%), Gaps = 26/348 (7%)
 Frame = +3

Query: 333  RGDGL--DIVSCNIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKR 506
            R DGL  D+V+ N  I  LCR+GK+ +A  I  +M                  +DE    
Sbjct: 2    REDGLFPDVVTFNSRISALCRAGKILEASRIFRDMQ-----------------MDEELGL 44

Query: 507  CLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAF 686
              P++ITY+ ++ G C+ G LEEAK     M  +    +   Y+I+L  L +  K+  A 
Sbjct: 45   PRPNVITYNLMLEGFCKQGMLEEAKTLVESMEKKGDLMNLESYNIWLLGLLRNAKLVEAQ 104

Query: 687  QVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSL 866
             VLKDM  KG    + +YN ++ GL     + +   +M  +   G+SP+  T++ +L+  
Sbjct: 105  LVLKDMIYKGVEPNIYSYNVVMDGLCKNGMLSDARMVMGFIISSGLSPDTVTFSTLLHGY 164

Query: 867  CEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFE-IAISVYGHEE 1043
            C   +   A  +L EM++ G  PN Y+  +L+ +  + G+   A+D+ + +    YG + 
Sbjct: 165  CCKGRLYAANSILHEMMRNGCFPNTYTCNILLHSLWKEGKISEAEDLLQKMNEKGYGVDT 224

Query: 1044 VLYSLMFNELLAGGEILEAKQL-------FEAALDRF--------FDLNS--------FC 1154
            V  +++ + L   G++ +A ++         AAL            D NS          
Sbjct: 225  VTCNIVIDGLCKSGKLDKAMEIGNEMWTHGSAALGNLGNSFIGLVDDANSSKQCIPDLVT 284

Query: 1155 YKDLINRLCVEENFDYARDILKKMVQIGCKFDPALFMPVIDYLGTRGK 1298
            Y  +I+ LC     D A+   K+M+    + D  +F   I      GK
Sbjct: 285  YSIIISALCKAGRLDEAKKKFKEMMGKNLQPDSVIFDIFIHIFCKEGK 332



 Score = 59.3 bits (142), Expect = 6e-06
 Identities = 41/184 (22%), Positives = 91/184 (49%), Gaps = 8/184 (4%)
 Frame = +3

Query: 807  MKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLDEML---QRGI-TPNIYSFKLLIKTFC 974
            M+E G+ P+V T+N  +++LC   K  EA+ +  +M    + G+  PN+ ++ L+++ FC
Sbjct: 1    MREDGLFPDVVTFNSRISALCRAGKILEASRIFRDMQMDEELGLPRPNVITYNLMLEGFC 60

Query: 975  RTGEFRPAKDVFEIAISVYGHEEVL----YSLMFNELLAGGEILEAKQLFEAALDRFFDL 1142
            + G    AK + E   S+    +++    Y++    LL   +++EA+ + +  + +  + 
Sbjct: 61   KQGMLEEAKTLVE---SMEKKGDLMNLESYNIWLLGLLRNAKLVEAQLVLKDMIYKGVEP 117

Query: 1143 NSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELT 1322
            N + Y  +++ LC       AR ++  ++  G   D   F  ++     +G+ +  N + 
Sbjct: 118  NIYSYNVVMDGLCKNGMLSDARMVMGFIISSGLSPDTVTFSTLLHGYCCKGRLYAANSIL 177

Query: 1323 ERML 1334
              M+
Sbjct: 178  HEMM 181


>gb|EOX97442.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 1
            [Theobroma cacao]
          Length = 872

 Score =  683 bits (1763), Expect = 0.0
 Identities = 321/522 (61%), Positives = 415/522 (79%), Gaps = 2/522 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M   G +PN YSYN+++DGLCKNGML+DAR V+G +IS+G+SPD  T+STLL GYC K
Sbjct: 348  KDMIYKGVEPNIYSYNVVMDGLCKNGMLSDARMVMGFIISSGLSPDTVTFSTLLHGYCCK 407

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
             +   AN +L+EM+R GC PNTYTCNILLHSLW+EG ++EAE L+QKMNE+G G+D V+C
Sbjct: 408  GRLYAANSILHEMMRNGCFPNTYTCNILLHSLWKEGKISEAEDLLQKMNEKGYGVDTVTC 467

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDE--NRKRCLPDLITYST 536
            NIVIDGLC+SGKLDKA+EI +EMWTHGSAALGNLGN +IGLVD+  + K+C+PDL+TYS 
Sbjct: 468  NIVIDGLCKSGKLDKAMEIGNEMWTHGSAALGNLGNSFIGLVDDANSSKQCIPDLVTYSI 527

Query: 537  VINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKG 716
            +I+ LC+ GRL+EAKKKF EM+G+NL PDS ++DIF++  CK GKISSAF+VLKDME+KG
Sbjct: 528  IISALCKAGRLDEAKKKFKEMMGKNLQPDSVIFDIFIHIFCKEGKISSAFRVLKDMEKKG 587

Query: 717  CNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAA 896
            CNK+LQTYN LI GLGS NQIFE++GL+DEM+ERG++PNV TYN ++  LCE  K ++  
Sbjct: 588  CNKSLQTYNSLILGLGSKNQIFEIYGLVDEMRERGITPNVCTYNNIIRCLCENGKMQDTT 647

Query: 897  FLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELL 1076
             +LDEMLQ+GI PNI SF++LI+ FC+  +F  A+++FEIA+S+ GH+E LY LMFNELL
Sbjct: 648  SILDEMLQKGINPNISSFRMLIEAFCKACDFGVAQELFEIALSICGHKEALYKLMFNELL 707

Query: 1077 AGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPA 1256
             GG++ EAK +FEAAL R F L  F YKDLI +LC ++  + A  IL KM+  G KFDPA
Sbjct: 708  VGGQLSEAKLVFEAALYRSFHLGGFLYKDLIEKLCKDKKLEEASRILHKMINKGYKFDPA 767

Query: 1257 LFMPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQT 1436
             FMPV+D LG RG KHE +EL E+M+ M+S+ ++ NK+  + ++  H ++ K GG DWQT
Sbjct: 768  TFMPVVDELGKRGNKHEADELAEKMMEMASDGRVGNKIYLNAREPIHRKEIKFGGDDWQT 827

Query: 1437 ILHRDDGSAIAMKTLKRVQKGWGQGNLSYFQAQRNDFLDDWD 1562
            I+HRDDGS IA+K LKRVQKGWGQG++S  Q  +N F D W+
Sbjct: 828  IVHRDDGSGIALKALKRVQKGWGQGSISRLQPHKNKFHDYWE 869



 Score =  175 bits (444), Expect = 6e-41
 Identities = 132/488 (27%), Positives = 226/488 (46%), Gaps = 45/488 (9%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M   G  P  Y++N+LI GLC  G L DAR +   M   G  P+  ++  L++GYCR 
Sbjct: 134  KDMVGAGVSPQTYTFNLLICGLCDLGHLDDARELFDKMSEKGCVPNEFSFGILVRGYCRF 193

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
                +  ++L++M R    PN    N L+ S  +EG   +AE L+++M E G   D+V+ 
Sbjct: 194  GLADKGVELLDDMRRFEIRPNRVVYNTLISSFCKEGKTDDAEKLVERMREDGLFPDVVTF 253

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLG----NLYI------GLVDE------ 494
            N  I  LCR+GK+ +A  I  +M       L        NL +      G+++E      
Sbjct: 254  NSRISALCRAGKILEASRIFRDMQMDEELGLPRPNVITYNLMLEGFCKQGMLEEAKTLVE 313

Query: 495  --NRKRCLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRG 668
               +K  L +L +Y+  + GL R+ +L EA+    +M+ + + P+   Y++ +  LCK G
Sbjct: 314  SMEKKGDLMNLESYNIWLLGLLRNAKLVEAQLVLKDMIYKGVEPNIYSYNVVMDGLCKNG 373

Query: 669  KISSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYN 848
             +S A  V+  +   G +    T++ L+ G     +++    ++ EM   G  PN YT N
Sbjct: 374  MLSDARMVMGFIISSGLSPDTVTFSTLLHGYCCKGRLYAANSILHEMMRNGCFPNTYTCN 433

Query: 849  IVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISV 1028
            I+L+SL +  K  EA  LL +M ++G   +  +  ++I   C++G+   A    EI   +
Sbjct: 434  ILLHSLWKEGKISEAEDLLQKMNEKGYGVDTVTCNIVIDGLCKSGKLDKA---MEIGNEM 490

Query: 1029 YGH---------------------------EEVLYSLMFNELLAGGEILEAKQLFEAALD 1127
            + H                           + V YS++ + L   G + EAK+ F+  + 
Sbjct: 491  WTHGSAALGNLGNSFIGLVDDANSSKQCIPDLVTYSIIISALCKAGRLDEAKKKFKEMMG 550

Query: 1128 RFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPALFMPVIDYLGTRGKKHE 1307
            +    +S  +   I+  C E     A  +LK M + GC      +  +I  LG++ +  E
Sbjct: 551  KNLQPDSVIFDIFIHIFCKEGKISSAFRVLKDMEKKGCNKSLQTYNSLILGLGSKNQIFE 610

Query: 1308 VNELTERM 1331
            +  L + M
Sbjct: 611  IYGLVDEM 618



 Score =  155 bits (391), Expect = 8e-35
 Identities = 108/404 (26%), Positives = 187/404 (46%), Gaps = 5/404 (1%)
 Frame = +3

Query: 135  PDVATYSTLLQGYCRKRKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEML 314
            P +  Y+ L +   ++R       +  +M+  G  P TYT N+L+  L   G++ +A  L
Sbjct: 108  PSICLYNVLFECCIKERCSDYVLWLYKDMVGAGVSPQTYTFNLLICGLCDLGHLDDAREL 167

Query: 315  MQKMNERGDGLDIVSCNIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDE 494
              KM+E+G   +  S  I++ G CR G  DK VE++ +M                     
Sbjct: 168  FDKMSEKGCVPNEFSFGILVRGYCRFGLADKGVELLDDM--------------------- 206

Query: 495  NRKRCLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKI 674
             R    P+ + Y+T+I+  C++G+ ++A+K    M    L+PD   ++  +  LC+ GKI
Sbjct: 207  RRFEIRPNRVVYNTLISSFCKEGKTDDAEKLVERMREDGLFPDVVTFNSRISALCRAGKI 266

Query: 675  SSAFQVLKDM---ERKGCNK-TLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYT 842
              A ++ +DM   E  G  +  + TYN ++ G      + E   L++ M+++G   N+ +
Sbjct: 267  LEASRIFRDMQMDEELGLPRPNVITYNLMLEGFCKQGMLEEAKTLVESMEKKGDLMNLES 326

Query: 843  YNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAI 1022
            YNI L  L    K  EA  +L +M+ +G+ PNIYS+ +++   C+ G    A+ V    I
Sbjct: 327  YNIWLLGLLRNAKLVEAQLVLKDMIYKGVEPNIYSYNVVMDGLCKNGMLSDARMVMGFII 386

Query: 1023 SV-YGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFD 1199
            S     + V +S + +     G +  A  +    +      N++    L++ L  E    
Sbjct: 387  SSGLSPDTVTFSTLLHGYCCKGRLYAANSILHEMMRNGCFPNTYTCNILLHSLWKEGKIS 446

Query: 1200 YARDILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELTERM 1331
             A D+L+KM + G   D      VID L   GK  +  E+   M
Sbjct: 447  EAEDLLQKMNEKGYGVDTVTCNIVIDGLCKSGKLDKAMEIGNEM 490



 Score = 75.5 bits (184), Expect = 8e-11
 Identities = 64/253 (25%), Positives = 118/253 (46%), Gaps = 10/253 (3%)
 Frame = +3

Query: 510  LPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNL----CKRGKIS 677
            L  L +  +++  L R G  + A  +F  +  R  +P +    I LYN+    C + + S
Sbjct: 70   LNPLSSLISLVKLLARSGFFDRAFSQFQSI--RTKFPQNPP-SICLYNVLFECCIKERCS 126

Query: 678  S-AFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIV 854
                 + KDM   G +    T+N LI GL     + +   L D+M E+G  PN +++ I+
Sbjct: 127  DYVLWLYKDMVGAGVSPQTYTFNLLICGLCDLGHLDDARELFDKMSEKGCVPNEFSFGIL 186

Query: 855  LNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFE-IAISVY 1031
            +   C    +++   LLD+M +  I PN   +  LI +FC+ G+   A+ + E +     
Sbjct: 187  VRGYCRFGLADKGVELLDDMRRFEIRPNRVVYNTLISSFCKEGKTDDAEKLVERMREDGL 246

Query: 1032 GHEEVLYSLMFNELLAGGEILEAKQLF-EAALDRFFDL---NSFCYKDLINRLCVEENFD 1199
              + V ++   + L   G+ILEA ++F +  +D    L   N   Y  ++   C +   +
Sbjct: 247  FPDVVTFNSRISALCRAGKILEASRIFRDMQMDEELGLPRPNVITYNLMLEGFCKQGMLE 306

Query: 1200 YARDILKKMVQIG 1238
             A+ +++ M + G
Sbjct: 307  EAKTLVESMEKKG 319


>ref|XP_006350361.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At2g17140-like [Solanum tuberosum]
          Length = 849

 Score =  682 bits (1759), Expect = 0.0
 Identities = 328/520 (63%), Positives = 412/520 (79%), Gaps = 2/520 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K +  +G  P  YSYNILIDGLCKNGML DA+ ++ LMI+ GI PD  TYSTLL GYC K
Sbjct: 330  KELPQNGVDPTIYSYNILIDGLCKNGMLGDAKMLMSLMINDGIFPDTVTYSTLLHGYCTK 389

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
             K  EA  +L EM++ GC+PN YTCN LLHS+W+EG V+EA+ L+QKMNERG GLD VSC
Sbjct: 390  SKVTEAKNILREMMKRGCIPNKYTCNTLLHSMWKEGKVSEAQQLLQKMNERGYGLDTVSC 449

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLV--DENRKRCLPDLITYST 536
            NIVI GLC++G++DKAVEIVSEMW+HGS ALG+LGN ++ LV  D+N ++CLPDLITYST
Sbjct: 450  NIVIHGLCQTGEVDKAVEIVSEMWSHGSVALGDLGNSFMSLVNEDDNGRKCLPDLITYST 509

Query: 537  VINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKG 716
            +IN L R+G+L+EAKKKF+EM+ + LYPDS +Y+  L++LCKRGK+SSAFQVLKDME K 
Sbjct: 510  IINSLFREGKLDEAKKKFVEMMRKKLYPDSIIYNTILHHLCKRGKVSSAFQVLKDMETKD 569

Query: 717  CNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAA 896
            C K+L+TYN LI GLG+ NQIFEM GLMDEM+E+G+SPNVYTYNI++  LC+  ++EEA 
Sbjct: 570  CKKSLRTYNSLILGLGNKNQIFEMCGLMDEMREKGISPNVYTYNIMIGCLCKSGRTEEAI 629

Query: 897  FLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELL 1076
             LL+EMLQ+GI PN+ +F+LLIK++CRTGEFRPA++VF+IA S+ GH E LY+LMFNE L
Sbjct: 630  PLLNEMLQKGIIPNMNTFELLIKSYCRTGEFRPAQEVFDIASSICGHSEALYALMFNEFL 689

Query: 1077 AGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPA 1256
            AGGEI+EAKQ  E A+D+ FDL SF YKDLI++LC  EN + A DIL KM+ IG  FDPA
Sbjct: 690  AGGEIMEAKQFLETAIDKHFDLGSFLYKDLIDKLCKVENLEGAHDILIKMMHIGYGFDPA 749

Query: 1257 LFMPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQT 1436
             FMPVID L   G+KH  +EL+ERML M SE ++ NK  ++ ++LNH ++ K GG  WQ 
Sbjct: 750  SFMPVIDGLNKLGQKHVADELSERMLEMVSESKVGNKAYQNYRELNHMKRSKYGGDGWQA 809

Query: 1437 ILHRDDGSAIAMKTLKRVQKGWGQGNLSYFQAQRNDFLDD 1556
            I++RDDGSA A+K LKRVQKGWGQG++   Q  R   LDD
Sbjct: 810  IVYRDDGSAAALKNLKRVQKGWGQGSIXSLQTPRYGILDD 849



 Score =  182 bits (463), Expect = 4e-43
 Identities = 134/493 (27%), Positives = 223/493 (45%), Gaps = 59/493 (11%)
 Frame = +3

Query: 30   PNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRKRKKVEANKV 209
            P  Y++N+LI GLC +  L DAR++  +M   G  P+  T+  L++GYC+    ++  K+
Sbjct: 125  PVTYTFNLLIHGLCHSDRLGDARQLFDVMPHKGCHPNEFTFGILIRGYCKFGLSLQGLKL 184

Query: 210  LNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSCNIVIDGLCR 389
            L+ M      PN    N L+ S  R+G+V EAE L+++M E G   D+V+ N  I  LC 
Sbjct: 185  LDTMKMMNVRPNVIIYNTLIASFCRKGDVDEAERLVERMREDGLLPDVVTFNSRISALCN 244

Query: 390  SGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYSTVINGLCRDGRL 569
            SGK+ +A  I  +M                  +DE  +   P+++T++ ++ G C+ G L
Sbjct: 245  SGKILEASRIFRDMQ-----------------IDEVFELPRPNVVTFNLMLQGFCQKGML 287

Query: 570  EEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCNKTLQTYNCL 749
            EEA+     M   +++ +   Y+I+L  L + GK+  A  VLK++ + G + T+ +YN L
Sbjct: 288  EEARTLTESMKKDDIFFNVQSYNIWLCGLVRNGKLLEAQTVLKELPQNGVDPTIYSYNIL 347

Query: 750  IFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQRGI 929
            I GL     + +   LM  M   G+ P+  TY+ +L+  C   K  EA  +L EM++RG 
Sbjct: 348  IDGLCKNGMLGDAKMLMSLMINDGIFPDTVTYSTLLHGYCTKSKVTEAKNILREMMKRGC 407

Query: 930  TPNIY-----------------------------------SFKLLIKTFCRTGEFRPAKD 1004
             PN Y                                   S  ++I   C+TGE   A +
Sbjct: 408  IPNKYTCNTLLHSMWKEGKVSEAQQLLQKMNERGYGLDTVSCNIVIHGLCQTGEVDKAVE 467

Query: 1005 VF-------EIAISVYGH-----------------EEVLYSLMFNELLAGGEILEAKQLF 1112
            +         +A+   G+                 + + YS + N L   G++ EAK+ F
Sbjct: 468  IVSEMWSHGSVALGDLGNSFMSLVNEDDNGRKCLPDLITYSTIINSLFREGKLDEAKKKF 527

Query: 1113 EAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPALFMPVIDYLGTR 1292
               + +    +S  Y  +++ LC       A  +LK M    CK     +  +I  LG +
Sbjct: 528  VEMMRKKLYPDSIIYNTILHHLCKRGKVSSAFQVLKDMETKDCKKSLRTYNSLILGLGNK 587

Query: 1293 GKKHEVNELTERM 1331
             +  E+  L + M
Sbjct: 588  NQIFEMCGLMDEM 600



 Score = 81.6 bits (200), Expect = 1e-12
 Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 7/230 (3%)
 Frame = +3

Query: 594  EMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTN 773
            +M+  ++ P +  +++ ++ LC   ++  A Q+   M  KGC+    T+  LI G     
Sbjct: 117  DMISASVSPVTYTFNLLIHGLCHSDRLGDARQLFDVMPHKGCHPNEFTFGILIRGYCKFG 176

Query: 774  QIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFK 953
               +   L+D MK   V PNV  YN ++ S C     +EA  L++ M + G+ P++ +F 
Sbjct: 177  LSLQGLKLLDTMKMMNVRPNVIIYNTLIASFCRKGDVDEAERLVERMREDGLLPDVVTFN 236

Query: 954  LLIKTFCRTGEFRPAKDVF-----EIAISVYGHEEVLYSLMFNELLAGGEILEAKQLFEA 1118
              I   C +G+   A  +F     +    +     V ++LM       G + EA+ L E+
Sbjct: 237  SRISALCNSGKILEASRIFRDMQIDEVFELPRPNVVTFNLMLQGFCQKGMLEEARTLTES 296

Query: 1119 AL--DRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPALF 1262
                D FF++ S  Y   +  L        A+ +LK++ Q G   DP ++
Sbjct: 297  MKKDDIFFNVQS--YNIWLCGLVRNGKLLEAQTVLKELPQNG--VDPTIY 342



 Score = 80.9 bits (198), Expect = 2e-12
 Identities = 57/236 (24%), Positives = 109/236 (46%), Gaps = 5/236 (2%)
 Frame = +3

Query: 534  TVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERK 713
            T++  L   G + +A   F      +  P  ++Y+  ++   K    +  F + +DM   
Sbjct: 62   TIVKLLASHGYIHDAISLFRSTRSHHPPPKLSLYNFLIHKSFKFNFPNFIFWLYQDMISA 121

Query: 714  GCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEA 893
              +    T+N LI GL  ++++ +   L D M  +G  PN +T+ I++   C+   S + 
Sbjct: 122  SVSPVTYTFNLLIHGLCHSDRLGDARQLFDVMPHKGCHPNEFTFGILIRGYCKFGLSLQG 181

Query: 894  AFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFE-IAISVYGHEEVLYSLMFNE 1070
              LLD M    + PN+  +  LI +FCR G+   A+ + E +       + V ++   + 
Sbjct: 182  LKLLDTMKMMNVRPNVIIYNTLIASFCRKGDVDEAERLVERMREDGLLPDVVTFNSRISA 241

Query: 1071 LLAGGEILEAKQLF-EAALDRFFDL---NSFCYKDLINRLCVEENFDYARDILKKM 1226
            L   G+ILEA ++F +  +D  F+L   N   +  ++   C +   + AR + + M
Sbjct: 242  LCNSGKILEASRIFRDMQIDEVFELPRPNVVTFNLMLQGFCQKGMLEEARTLTESM 297


>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 874

 Score =  677 bits (1747), Expect = 0.0
 Identities = 321/522 (61%), Positives = 411/522 (78%), Gaps = 2/522 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M   G +P+ YSYNI++DGLCKNGML+DAR ++GLMI  GI PD  TYSTLL GYC K
Sbjct: 350  KEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSK 409

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
             K  EAN +L+EMI   C PNTYTCN+LLHSLW+EG ++EAE L+QKMNE+G G+D V+C
Sbjct: 410  GKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTC 469

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDE--NRKRCLPDLITYST 536
            NI+I+ LC +G+LDKA+EIV+ MWTHGSAALGNLGN +IGLVD+  + K+C PDL+TYST
Sbjct: 470  NIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYST 529

Query: 537  VINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKG 716
            +I+GLC+ GRL++AKKKFIEM+ + L PDS +YD F+++ C+ GKISSAFQVLKDME++G
Sbjct: 530  IISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRG 589

Query: 717  CNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAA 896
            CNKTLQTYN LI GLGS NQIFE++GL+DEM+E+GVSP+V TYN +LN LCEG +  +A 
Sbjct: 590  CNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAP 649

Query: 897  FLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELL 1076
             +LDEMLQ+GI+PNI SF++LIK FC+  +F+ + +VFEIA++V GH+E LY+LMFNELL
Sbjct: 650  SVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELL 709

Query: 1077 AGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPA 1256
             GG++ EAK+LFE ALDR FD+ +F YKDLI+RLC +E  + A D+L +++  G +FDPA
Sbjct: 710  VGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPA 769

Query: 1257 LFMPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQT 1436
             FMPVID  G  G KH  +EL ERM+ M+SE   ENK   + K      + KD G+DW  
Sbjct: 770  SFMPVIDGFGKMGNKHVADELAERMMEMASESNKENKAYPNVKGHILRNKNKDAGNDWPI 829

Query: 1437 ILHRDDGSAIAMKTLKRVQKGWGQGNLSYFQAQRNDFLDDWD 1562
            I+HRDDGS IA+K LKRVQKGWGQG++S  Q Q+ +F D WD
Sbjct: 830  IVHRDDGSGIALKALKRVQKGWGQGSISSLQPQKLEFFDYWD 871



 Score =  181 bits (460), Expect = 8e-43
 Identities = 138/479 (28%), Positives = 217/479 (45%), Gaps = 45/479 (9%)
 Frame = +3

Query: 30   PNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRKRKKVEANKV 209
            P AY++N+LI  LC +G L DAR +   M + G  P+  T+  L++GYCR     +  ++
Sbjct: 145  PEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLEL 204

Query: 210  LNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSCNIVIDGLCR 389
            L +M   G LPN    N L+ S  +EG   +AE L+ KM E G    + + N  I  LC 
Sbjct: 205  LGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCG 264

Query: 390  SGKLDKAVEIVSEMWTHGSAALGN----------LGNLYIGLVDE--------NRKRCLP 515
            SGK+ +A  I  +M       L +          +G    G+++E         R     
Sbjct: 265  SGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFI 324

Query: 516  DLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVL 695
            +L +Y+  + GL R+G+L EA     EMLG  + PD   Y+I +  LCK G +S A  ++
Sbjct: 325  NLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLM 384

Query: 696  KDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEG 875
              M R G      TY+ L+ G  S  ++FE   L+ EM     SPN YT N++L+SL + 
Sbjct: 385  GLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKE 444

Query: 876  EKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGH------ 1037
             +  EA  LL +M ++G   +  +  ++I   C  G+   A    EI   ++ H      
Sbjct: 445  GRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKA---IEIVNGMWTHGSAALG 501

Query: 1038 ---------------------EEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFC 1154
                                 + V YS + + L   G + +AK+ F   + +    +S  
Sbjct: 502  NLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAI 561

Query: 1155 YKDLINRLCVEENFDYARDILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELTERM 1331
            Y   I+  C E     A  +LK M + GC      +  +I  LG++ +  E+  L + M
Sbjct: 562  YDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEM 620



 Score =  161 bits (408), Expect = 9e-37
 Identities = 132/511 (25%), Positives = 228/511 (44%), Gaps = 63/511 (12%)
 Frame = +3

Query: 9    MADDGPQPNAYSYNILIDGLCKNGMLADARRVV-GLMISAGIS---PDVATYSTLLQGYC 176
            M +DG  P+  ++N  I  LC +G + +A R+   + I   +    P+V TY  +L G+C
Sbjct: 243  MREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFC 302

Query: 177  RKRKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIV 356
            ++    EA  +++ M R     N  + NI L  L R G + EA +++++M   G   DI 
Sbjct: 303  KEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIY 362

Query: 357  SCNIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYST 536
            S NIV+DGLC++G L  A                    + +GL+  N    LPD +TYST
Sbjct: 363  SYNIVMDGLCKNGMLSDA-------------------RMLMGLMIRN--GILPDTVTYST 401

Query: 537  VINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKG 716
            +++G C  G++ EA     EM+  N  P++   ++ L++L K G+IS A  +L+ M  KG
Sbjct: 402  LLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKG 461

Query: 717  CNKTLQTYNCLIFGLGSTNQIFE----------------------MFGLMDE-MKERGVS 827
                  T N +I  L +  Q+ +                        GL+D+ +  +  +
Sbjct: 462  YGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCT 521

Query: 828  PNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGE----FRP 995
            P++ TY+ +++ LC+  + ++A     EM+ +G+ P+   +   I +FCR G+    F+ 
Sbjct: 522  PDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQV 581

Query: 996  AKD-------------------------VFEIAISVYGHEE-------VLYSLMFNELLA 1079
             KD                         +FE+   +    E         Y+ M N L  
Sbjct: 582  LKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCE 641

Query: 1080 GGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPAL 1259
            GG I +A  + +  L +    N   ++ LI   C   +F  + ++ +  + + C    AL
Sbjct: 642  GGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNV-CGHKEAL 700

Query: 1260 FMPVIDYLGTRGKKHEVNELTERMLAMSSEV 1352
            +  + + L   GK  E  EL E  L  S ++
Sbjct: 701  YTLMFNELLVGGKVAEAKELFETALDRSFDI 731



 Score =  144 bits (364), Expect = 1e-31
 Identities = 99/383 (25%), Positives = 185/383 (48%), Gaps = 19/383 (4%)
 Frame = +3

Query: 135  PDVATYSTLLQGYCRKRKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEML 314
            P +  Y+ LL+   R+ +    + +  +M+     P  YT N+L+  L   G++ +A  L
Sbjct: 110  PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169

Query: 315  MQKMNERGDGLDIVSCNIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIG---- 482
              KM  RG   +  +  I++ G CR+G   K +E++ +M T G      L N  I     
Sbjct: 170  FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229

Query: 483  ---------LVDENRKRCL-PDLITYSTVINGLCRDGRLEEAKKKFIEM-LGRNL---YP 620
                     LVD+ R+  L P + T+++ I+ LC  G++ EA + F +M +   L   +P
Sbjct: 230  EGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHP 289

Query: 621  DSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLM 800
            +   Y + L   CK G +  A  ++  M+R      L++YN  + GL    ++ E + ++
Sbjct: 290  NVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVL 349

Query: 801  DEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRT 980
             EM   G+ P++Y+YNIV++ LC+     +A  L+  M++ GI P+  ++  L+  +C  
Sbjct: 350  KEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSK 409

Query: 981  GEFRPAKDVF-EIAISVYGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCY 1157
            G+   A ++  E+  +         +++ + L   G I EA+ L +   ++ + +++   
Sbjct: 410  GKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTC 469

Query: 1158 KDLINRLCVEENFDYARDILKKM 1226
              +IN LC     D A +I+  M
Sbjct: 470  NIIINALCNNGQLDKAIEIVNGM 492



 Score =  103 bits (257), Expect = 3e-19
 Identities = 73/285 (25%), Positives = 135/285 (47%), Gaps = 7/285 (2%)
 Frame = +3

Query: 504  RCLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSA 683
            R  P+  T++ +I  LC  G LE+A++ F +M  R   P+   + I +   C+ G  S  
Sbjct: 142  RVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKG 201

Query: 684  FQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNS 863
             ++L  M   G       YN LI       +  +   L+D+M+E G+ P+V T+N  +++
Sbjct: 202  LELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISA 261

Query: 864  LCEGEKSEEAAFLLDEML---QRGIT-PNIYSFKLLIKTFCRTGEFRPAK---DVFEIAI 1022
            LC   K  EA+ +  +M    + G+  PN+ ++KL++  FC+ G    AK   D  +   
Sbjct: 262  LCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNA 321

Query: 1023 SVYGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDY 1202
            +    E   Y++    L+  G++LEA  + +  L    + + + Y  +++ LC       
Sbjct: 322  NFINLES--YNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSD 379

Query: 1203 ARDILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELTERMLA 1337
            AR ++  M++ G   D   +  ++    ++GK  E N L   M++
Sbjct: 380  ARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMIS 424



 Score = 88.6 bits (218), Expect = 9e-15
 Identities = 63/279 (22%), Positives = 122/279 (43%), Gaps = 5/279 (1%)
 Frame = +3

Query: 513  PDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQV 692
            P +  Y+ ++    R+ R+E     + +M+   + P++  +++ +  LC  G +  A ++
Sbjct: 110  PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169

Query: 693  LKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCE 872
               M  +GC     T+  L+ G        +   L+ +M+  G+ PN   YN +++S C+
Sbjct: 170  FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229

Query: 873  GEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVF-----EIAISVYGH 1037
              K+ +A  L+D+M + G+ P++ +F   I   C +G+   A  +F     +  + +   
Sbjct: 230  EGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHP 289

Query: 1038 EEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDIL 1217
              + Y LM       G + EAK L +        +N   Y   +  L        A  +L
Sbjct: 290  NVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVL 349

Query: 1218 KKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELTERML 1334
            K+M+ IG + D   +  V+D L   G   +   L   M+
Sbjct: 350  KEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMI 388


>ref|XP_004290060.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140-like
            [Fragaria vesca subsp. vesca]
          Length = 871

 Score =  664 bits (1714), Expect = 0.0
 Identities = 322/519 (62%), Positives = 406/519 (78%), Gaps = 2/519 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M   G + N YSYNILI+GLCKNGML DAR V+ LM    ISPD  TYSTLL GYC K
Sbjct: 353  KEMVHKGIELNIYSYNILINGLCKNGMLRDARMVMDLMARNNISPDTVTYSTLLHGYCNK 412

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
             K  EA+ VL EMI   C PNT+TCNILLHSLW+EG ++EAE L+QKMNE+G GLD V+C
Sbjct: 413  GKVFEASNVLQEMIMKNCFPNTHTCNILLHSLWKEGRISEAEELLQKMNEKGYGLDTVTC 472

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDE--NRKRCLPDLITYST 536
            NIVIDGLC  GKLDKA+EIVS MWTHG AALGNLGN ++GLVD+  N  +CLPDLI+YST
Sbjct: 473  NIVIDGLCNDGKLDKAIEIVSGMWTHGGAALGNLGNSFVGLVDDCNNGNKCLPDLISYST 532

Query: 537  VINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKG 716
            +I+GLC+ GRL+EAKKKF+EM+GRNL+PDS +YD F+   CK GKISSAF+VLKDME+KG
Sbjct: 533  IISGLCKAGRLDEAKKKFMEMMGRNLHPDSVIYDTFIRTFCKEGKISSAFRVLKDMEKKG 592

Query: 717  CNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAA 896
            CNK++QTYN LI G+GS  QIFE++GLMDEMKERGV P+V TYN ++  LCE E+ ++A 
Sbjct: 593  CNKSIQTYNSLILGIGSKKQIFEIYGLMDEMKERGVPPDVCTYNNMMTCLCEVERVKDAT 652

Query: 897  FLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELL 1076
             LLDEMLQ+GI+PNI +F++LIK FC+  +F  A++VF+IA+SV GH+E LYS+MFNELL
Sbjct: 653  SLLDEMLQKGISPNISTFRILIKAFCKGFDFAVAQEVFDIALSVCGHKEALYSMMFNELL 712

Query: 1077 AGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPA 1256
            AGGE+ +A +LF+ ALD++F L +F YKDL++RLC+++  D A  IL  M+  G  FD A
Sbjct: 713  AGGEVAKATELFKEALDKYFYLGNFLYKDLMDRLCMDQKLDDACSILHNMMNKGYGFDSA 772

Query: 1257 LFMPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQT 1436
             F+PVID LG +G KHE +EL ERM+ M+SE ++ NKV R  + +  G+ Y   GSDWQT
Sbjct: 773  SFLPVIDGLGKKGNKHEADELAERMMEMASEGRIANKVYRSQRDIIGGKPY-SCGSDWQT 831

Query: 1437 ILHRDDGSAIAMKTLKRVQKGWGQGNLSYFQAQRNDFLD 1553
            I++RDDGS + +KTLKRVQKGWG+ NL+  Q +++ F D
Sbjct: 832  IVNRDDGSGVILKTLKRVQKGWGRANLTSLQTRKDQFFD 870



 Score =  169 bits (428), Expect = 4e-39
 Identities = 112/370 (30%), Positives = 186/370 (50%), Gaps = 1/370 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M   G +P  Y++N+LI  LC    L DAR+V   M   G  P+  + + L++GYCR 
Sbjct: 139  KDMIASGVRPQTYTFNLLICALCDCSRLEDARQVFDKMRDKGCVPNEYSVAILVRGYCRA 198

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
                +A  VL+EM   G   N    N L+ S  +EG   EAE L+++M E G   D+++ 
Sbjct: 199  GFGSDALDVLDEMRGCGVGVNRVVYNTLVSSFCKEGRTDEAEKLVERMREEGMFPDVITF 258

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYSTVI 542
            N  I  LC +GK+ +A  I  +M  H   ALG                  P+++TY+ ++
Sbjct: 259  NSRISALCSAGKILEASRIFRDM--HMDQALG---------------LPQPNVVTYNLML 301

Query: 543  NGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCN 722
             G C++G LEEA+  F  M       +   Y+I+L  L +  K+  A  VLK+M  KG  
Sbjct: 302  QGFCKEGMLEEAESLFKSMEKAGGLINLESYNIWLLGLVRNKKLLEARLVLKEMVHKGIE 361

Query: 723  KTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFL 902
              + +YN LI GL     + +   +MD M    +SP+  TY+ +L+  C   K  EA+ +
Sbjct: 362  LNIYSYNILINGLCKNGMLRDARMVMDLMARNNISPDTVTYSTLLHGYCNKGKVFEASNV 421

Query: 903  LDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFE-IAISVYGHEEVLYSLMFNELLA 1079
            L EM+ +   PN ++  +L+ +  + G    A+++ + +    YG + V  +++ + L  
Sbjct: 422  LQEMIMKNCFPNTHTCNILLHSLWKEGRISEAEELLQKMNEKGYGLDTVTCNIVIDGLCN 481

Query: 1080 GGEILEAKQL 1109
             G++ +A ++
Sbjct: 482  DGKLDKAIEI 491



 Score =  148 bits (373), Expect = 1e-32
 Identities = 110/404 (27%), Positives = 184/404 (45%), Gaps = 5/404 (1%)
 Frame = +3

Query: 135  PDVATYSTLLQGYCRKRKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEML 314
            P V  Y+ LL+   R         +  +MI  G  P TYT N+L+ +L     + +A  +
Sbjct: 113  PPVYLYNLLLESTLRNNDVDYVLWLYKDMIASGVRPQTYTFNLLICALCDCSRLEDARQV 172

Query: 315  MQKMNERGDGLDIVSCNIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDE 494
              KM ++G   +  S  I++ G CR+G    A++++ EM   G              V  
Sbjct: 173  FDKMRDKGCVPNEYSVAILVRGYCRAGFGSDALDVLDEMRGCG--------------VGV 218

Query: 495  NRKRCLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKI 674
            NR       + Y+T+++  C++GR +EA+K    M    ++PD   ++  +  LC  GKI
Sbjct: 219  NR-------VVYNTLVSSFCKEGRTDEAEKLVERMREEGMFPDVITFNSRISALCSAGKI 271

Query: 675  SSAFQVLKDMERKGC----NKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYT 842
              A ++ +DM            + TYN ++ G      + E   L   M++ G   N+ +
Sbjct: 272  LEASRIFRDMHMDQALGLPQPNVVTYNLMLQGFCKEGMLEEAESLFKSMEKAGGLINLES 331

Query: 843  YNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEI-A 1019
            YNI L  L   +K  EA  +L EM+ +GI  NIYS+ +LI   C+ G  R A+ V ++ A
Sbjct: 332  YNIWLLGLVRNKKLLEARLVLKEMVHKGIELNIYSYNILINGLCKNGMLRDARMVMDLMA 391

Query: 1020 ISVYGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFD 1199
             +    + V YS + +     G++ EA  + +  + +    N+     L++ L  E    
Sbjct: 392  RNNISPDTVTYSTLLHGYCNKGKVFEASNVLQEMIMKNCFPNTHTCNILLHSLWKEGRIS 451

Query: 1200 YARDILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELTERM 1331
             A ++L+KM + G   D      VID L   GK  +  E+   M
Sbjct: 452  EAEELLQKMNEKGYGLDTVTCNIVIDGLCNDGKLDKAIEIVSGM 495



 Score =  103 bits (256), Expect = 4e-19
 Identities = 69/279 (24%), Positives = 132/279 (47%), Gaps = 5/279 (1%)
 Frame = +3

Query: 513  PDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQV 692
            P   T++ +I  LC   RLE+A++ F +M  +   P+     I +   C+ G  S A  V
Sbjct: 148  PQTYTFNLLICALCDCSRLEDARQVFDKMRDKGCVPNEYSVAILVRGYCRAGFGSDALDV 207

Query: 693  LKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCE 872
            L +M   G       YN L+       +  E   L++ M+E G+ P+V T+N  +++LC 
Sbjct: 208  LDEMRGCGVGVNRVVYNTLVSSFCKEGRTDEAEKLVERMREEGMFPDVITFNSRISALCS 267

Query: 873  GEKSEEAAFLLDEM-LQRGI---TPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHE 1040
              K  EA+ +  +M + + +    PN+ ++ L+++ FC+ G    A+ +F+      G  
Sbjct: 268  AGKILEASRIFRDMHMDQALGLPQPNVVTYNLMLQGFCKEGMLEEAESLFKSMEKAGGLI 327

Query: 1041 EV-LYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDIL 1217
             +  Y++    L+   ++LEA+ + +  + +  +LN + Y  LIN LC       AR ++
Sbjct: 328  NLESYNIWLLGLVRNKKLLEARLVLKEMVHKGIELNIYSYNILINGLCKNGMLRDARMVM 387

Query: 1218 KKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELTERML 1334
              M +     D   +  ++     +GK  E + + + M+
Sbjct: 388  DLMARNNISPDTVTYSTLLHGYCNKGKVFEASNVLQEMI 426


>ref|XP_004231526.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140-like
            [Solanum lycopersicum]
          Length = 837

 Score =  654 bits (1687), Expect = 0.0
 Identities = 317/507 (62%), Positives = 399/507 (78%), Gaps = 2/507 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M  +G  P  YSYNILI GLCK+GML DA+ ++ LMI+ GI PD  TYSTLL GYC K
Sbjct: 331  KEMPQNGVDPTIYSYNILIHGLCKHGMLGDAKMLMSLMINDGIFPDTVTYSTLLHGYCTK 390

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
             +  EA  +L EM++ GC+PN YTCN LLHS+W+EG V+EA+ L+QKMNERG GLD VSC
Sbjct: 391  SEVTEAKNILREMMKRGCIPNKYTCNTLLHSMWKEGKVSEAQQLLQKMNERGYGLDTVSC 450

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLV--DENRKRCLPDLITYST 536
            NIVI GLC+ G++DKAVEIVSEMW+HGS ALG+ GN  + LV  D++ ++CLPDLITYS 
Sbjct: 451  NIVIHGLCQIGEVDKAVEIVSEMWSHGSIALGDFGNSLMSLVNEDDHGRKCLPDLITYSI 510

Query: 537  VINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKG 716
            +IN L R+G+L+EAKKKF+EM+ + LYPDS +Y+  L++LCKRGKISSAFQVLKDME K 
Sbjct: 511  IINSLFREGKLDEAKKKFVEMMRKKLYPDSVIYNTILHHLCKRGKISSAFQVLKDMETKD 570

Query: 717  CNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAA 896
            C K+L+TYN LI GLG  NQIFEM GLMDEM+E+G+SP+VYTYNI++  LC+  ++E+A 
Sbjct: 571  CKKSLRTYNSLILGLGDKNQIFEMCGLMDEMREKGISPSVYTYNIMIGCLCKSGRTEKAI 630

Query: 897  FLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELL 1076
             LL+EMLQ+GI PN  +F+LLIK++CRTGEFRPA++VF+IA ++ GH E LY+LMFNE L
Sbjct: 631  PLLNEMLQKGIIPNTNTFELLIKSYCRTGEFRPAQEVFDIASTICGHTEALYALMFNEFL 690

Query: 1077 AGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPA 1256
            AG EI+EAKQ  E A+D+ FDL SF YKDLI++LC  EN + A DIL KM+ IG  FDPA
Sbjct: 691  AGDEIVEAKQFLETAIDKHFDLGSFLYKDLIDKLCKVENLEGAHDILIKMMHIGYGFDPA 750

Query: 1257 LFMPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQT 1436
             FMPVID L   G+KH  +ELTERML M SE ++ NK  ++ ++LNH ++ K GG  WQ 
Sbjct: 751  SFMPVIDGLIKLGQKHVADELTERMLEMVSEGKVGNKTYQNYRELNHMKRSKYGGDGWQA 810

Query: 1437 ILHRDDGSAIAMKTLKRVQKGWGQGNL 1517
            I+HRDDGSA A+K LKRVQKGWGQG++
Sbjct: 811  IVHRDDGSAAALKNLKRVQKGWGQGSI 837



 Score =  180 bits (457), Expect = 2e-42
 Identities = 135/493 (27%), Positives = 225/493 (45%), Gaps = 59/493 (11%)
 Frame = +3

Query: 30   PNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRKRKKVEANKV 209
            P  Y++N+LI GLC +  L DAR +  LM   G  P+  T+  L++ YC+    ++  K+
Sbjct: 126  PVTYTFNLLIHGLCNSDRLRDARHLFDLMPHKGCHPNHFTFGILIRAYCKFGLSLQGLKL 185

Query: 210  LNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSCNIVIDGLCR 389
            L+ M      PN    N L+ S  R+G+V EAE L+Q+M + G   D+V+ N  I  LC 
Sbjct: 186  LDTMKMMNVCPNIIIYNTLVASFCRKGDVDEAERLVQRMRDDGLLPDVVTFNSRISALCN 245

Query: 390  SGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYSTVINGLCRDGRL 569
            SGK+ +A  I  +M                  +DE      P+++T++ ++ G C+ G L
Sbjct: 246  SGKILEASRIFRDMQ-----------------IDEVFGLPRPNIVTFNLMLQGFCQKGML 288

Query: 570  EEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCNKTLQTYNCL 749
            EEA+     M   +++ +   Y+I+L  L + GK+  A  VLK+M + G + T+ +YN L
Sbjct: 289  EEARTLTESMKKDDIFFNVQSYNIWLCGLVRNGKLLEAQTVLKEMPQNGVDPTIYSYNIL 348

Query: 750  IFGL-----------------------------------GSTNQIFEMFGLMDEMKERGV 824
            I GL                                    + +++ E   ++ EM +RG 
Sbjct: 349  IHGLCKHGMLGDAKMLMSLMINDGIFPDTVTYSTLLHGYCTKSEVTEAKNILREMMKRGC 408

Query: 825  SPNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKD 1004
             PN YT N +L+S+ +  K  EA  LL +M +RG   +  S  ++I   C+ GE   A +
Sbjct: 409  IPNKYTCNTLLHSMWKEGKVSEAQQLLQKMNERGYGLDTVSCNIVIHGLCQIGEVDKAVE 468

Query: 1005 VF-------EIAISVYGH-----------------EEVLYSLMFNELLAGGEILEAKQLF 1112
            +         IA+  +G+                 + + YS++ N L   G++ EAK+ F
Sbjct: 469  IVSEMWSHGSIALGDFGNSLMSLVNEDDHGRKCLPDLITYSIIINSLFREGKLDEAKKKF 528

Query: 1113 EAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPALFMPVIDYLGTR 1292
               + +    +S  Y  +++ LC       A  +LK M    CK     +  +I  LG +
Sbjct: 529  VEMMRKKLYPDSVIYNTILHHLCKRGKISSAFQVLKDMETKDCKKSLRTYNSLILGLGDK 588

Query: 1293 GKKHEVNELTERM 1331
             +  E+  L + M
Sbjct: 589  NQIFEMCGLMDEM 601



 Score = 79.7 bits (195), Expect = 4e-12
 Identities = 58/243 (23%), Positives = 111/243 (45%), Gaps = 5/243 (2%)
 Frame = +3

Query: 513  PDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQV 692
            P L    T++  L   G + +A   F      +  P  ++Y+  +Y   K    +    +
Sbjct: 56   PHLTCQYTIVKLLASHGHIHDAIFLFRSTRSHHPPPRLSLYNFLIYKSFKFNYSNFISWL 115

Query: 693  LKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCE 872
             +DM     +    T+N LI GL +++++ +   L D M  +G  PN +T+ I++ + C+
Sbjct: 116  YQDMISASVSPVTYTFNLLIHGLCNSDRLRDARHLFDLMPHKGCHPNHFTFGILIRAYCK 175

Query: 873  GEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFE-IAISVYGHEEVL 1049
               S +   LLD M    + PNI  +  L+ +FCR G+   A+ + + +       + V 
Sbjct: 176  FGLSLQGLKLLDTMKMMNVCPNIIIYNTLVASFCRKGDVDEAERLVQRMRDDGLLPDVVT 235

Query: 1050 YSLMFNELLAGGEILEAKQLF-EAALDRFFDL---NSFCYKDLINRLCVEENFDYARDIL 1217
            ++   + L   G+ILEA ++F +  +D  F L   N   +  ++   C +   + AR + 
Sbjct: 236  FNSRISALCNSGKILEASRIFRDMQIDEVFGLPRPNIVTFNLMLQGFCQKGMLEEARTLT 295

Query: 1218 KKM 1226
            + M
Sbjct: 296  ESM 298



 Score = 62.4 bits (150), Expect = 7e-07
 Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 6/247 (2%)
 Frame = +3

Query: 609  NLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEM 788
            +L P  T     +  L   G I  A  + +          L  YN LI+     N    +
Sbjct: 53   SLSPHLTCQYTIVKLLASHGHIHDAIFLFRSTRSHHPPPRLSLYNFLIYKSFKFNYSNFI 112

Query: 789  FGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKT 968
              L  +M    VSP  YT+N++++ LC  ++  +A  L D M  +G  PN ++F +LI+ 
Sbjct: 113  SWLYQDMISASVSPVTYTFNLLIHGLCNSDRLRDARHLFDLMPHKGCHPNHFTFGILIRA 172

Query: 969  FCRTG-EFRPAKDVFEIAISVYGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLN 1145
            +C+ G   +  K +  + +       ++Y+ +       G++ EA++L +   D     +
Sbjct: 173  YCKFGLSLQGLKLLDTMKMMNVCPNIIIYNTLVASFCRKGDVDEAERLVQRMRDDGLLPD 232

Query: 1146 SFCYKDLINRLCVEENFDYARDILKKMVQIGCKF-----DPALFMPVIDYLGTRGKKHEV 1310
               +   I+ LC       A  I + M QI   F     +   F  ++     +G   E 
Sbjct: 233  VVTFNSRISALCNSGKILEASRIFRDM-QIDEVFGLPRPNIVTFNLMLQGFCQKGMLEEA 291

Query: 1311 NELTERM 1331
              LTE M
Sbjct: 292  RTLTESM 298


>ref|XP_006422433.1| hypothetical protein CICLE_v10027787mg [Citrus clementina]
            gi|557524367|gb|ESR35673.1| hypothetical protein
            CICLE_v10027787mg [Citrus clementina]
          Length = 889

 Score =  652 bits (1681), Expect = 0.0
 Identities = 318/520 (61%), Positives = 406/520 (78%), Gaps = 2/520 (0%)
 Frame = +3

Query: 9    MADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRKRK 188
            M + G +P+ +SYNILIDGLCKN ML+DAR V+ LM+  GISPD  TYSTLL GYC   K
Sbjct: 356  MVEKGVEPSIHSYNILIDGLCKNRMLSDARMVMDLMVDRGISPDTITYSTLLHGYCSNGK 415

Query: 189  KVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSCNI 368
              EAN VL EMIR GC P  +TCNILLHSL++EG ++EAE L+QKMNERG  LD V+CNI
Sbjct: 416  VFEANNVLYEMIRNGCSPTIFTCNILLHSLYKEGRISEAEDLLQKMNERGYDLDTVTCNI 475

Query: 369  VIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDE--NRKRCLPDLITYSTVI 542
            +I GLC  GKLDKA+EIV+EMWT GSAALGNLGN ++   D+  ++K+CLPDLITYSTVI
Sbjct: 476  IIHGLCNCGKLDKAIEIVNEMWTKGSAALGNLGNFFVVPADDTNSKKKCLPDLITYSTVI 535

Query: 543  NGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCN 722
            + LC+ G+L+EAKKKF EM+G+N+ PDS VYD F+++ CK GK+SSAF+VLKDME+ GC+
Sbjct: 536  SALCKAGKLDEAKKKFTEMMGKNVRPDSFVYDNFIHSYCKEGKLSSAFRVLKDMEKNGCS 595

Query: 723  KTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFL 902
            KTLQTYN LI GLGS  QIFE+ GL++EM+ERGVSPNV TYN +L  LCEG K E+A   
Sbjct: 596  KTLQTYNSLILGLGSKAQIFEIHGLLNEMRERGVSPNVCTYNNILKCLCEGSKIEDAISC 655

Query: 903  LDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELLAG 1082
            LDEM QRGI  N+ SF++L++ FC+ GEFR A++ F+ A+S+ GH+E +YSLMFNELL  
Sbjct: 656  LDEMQQRGIL-NVSSFRMLVRVFCKAGEFRVAQEAFKTALSMCGHKEGIYSLMFNELLLA 714

Query: 1083 GEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPALF 1262
            GE+ EAK++FEAAL++ +DL +F YK LI+ LC +E  + A  I+ KM+  G  FDPA F
Sbjct: 715  GEVSEAKEIFEAALEKSYDLGNFLYKVLIDGLCKDEKLEEATGIIYKMIDKGYGFDPASF 774

Query: 1263 MPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQTIL 1442
            MPVID LG RGKKHE +EL E+M+ M+S+ ++ +K+ ++  +L   +Q K+GGS WQ IL
Sbjct: 775  MPVIDALGERGKKHEADELAEKMMEMTSDGRVAHKISQNAGELVRRKQNKNGGSVWQDIL 834

Query: 1443 HRDDGSAIAMKTLKRVQKGWGQGNLSYFQAQRNDFLDDWD 1562
            HR+DGS IA+KTLKRVQKGWGQG++S  QAQ+ D LD W+
Sbjct: 835  HREDGSGIALKTLKRVQKGWGQGSISSLQAQKYDLLDYWE 874



 Score =  193 bits (491), Expect = 2e-46
 Identities = 132/464 (28%), Positives = 225/464 (48%), Gaps = 24/464 (5%)
 Frame = +3

Query: 9    MADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRKRK 188
            M+D G +PN +S+ IL+ G C+ G+  +   ++ LM S G SP+   Y+TL+  +CR  K
Sbjct: 177  MSDKGCRPNEFSFAILVRGYCRAGLADEGLELMELMRSLGFSPNRVVYNTLISSFCRDGK 236

Query: 189  KVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGD-GL---DIV 356
              +A K++  M   G  P+  T N  + +L R G + EA  + + M    D GL   +I+
Sbjct: 237  TEDAEKMVERMREDGMFPDVVTFNSRISALCRTGKILEASRIFRDMQLDEDLGLPRPNII 296

Query: 357  SCNIVIDGLCRSGKLDKAVEIVS--------------EMWTHGSAALGNLGNLYIGLVDE 494
            + N++++G C+ G L++A  +V                +W  G    G L      L + 
Sbjct: 297  TYNLMLEGFCKEGMLEEAKTLVDAVTKNGGSLNLESYNIWLMGLVRNGKLVEAQAVLQEM 356

Query: 495  NRKRCLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKI 674
              K   P + +Y+ +I+GLC++  L +A+     M+ R + PD+  Y   L+  C  GK+
Sbjct: 357  VEKGVEPSIHSYNILIDGLCKNRMLSDARMVMDLMVDRGISPDTITYSTLLHGYCSNGKV 416

Query: 675  SSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIV 854
              A  VL +M R GC+ T+ T N L+  L    +I E   L+ +M ERG   +  T NI+
Sbjct: 417  FEANNVLYEMIRNGCSPTIFTCNILLHSLYKEGRISEAEDLLQKMNERGYDLDTVTCNII 476

Query: 855  LNSLCEGEKSEEAAFLLDEMLQRGITP--NIYSFKLLIKTFCRTGEFRPAKDVFEIAISV 1028
            ++ LC   K ++A  +++EM  +G     N+ +F ++           PA D       +
Sbjct: 477  IHGLCNCGKLDKAIEIVNEMWTKGSAALGNLGNFFVV-----------PADDTNSKKKCL 525

Query: 1029 YGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYAR 1208
               + + YS + + L   G++ EAK+ F   + +    +SF Y + I+  C E     A 
Sbjct: 526  --PDLITYSTVISALCKAGKLDEAKKKFTEMMGKNVRPDSFVYDNFIHSYCKEGKLSSAF 583

Query: 1209 DILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEV----NELTER 1328
             +LK M + GC      +  +I  LG++ +  E+    NE+ ER
Sbjct: 584  RVLKDMEKNGCSKTLQTYNSLILGLGSKAQIFEIHGLLNEMRER 627



 Score =  177 bits (449), Expect = 2e-41
 Identities = 106/330 (32%), Positives = 177/330 (53%), Gaps = 2/330 (0%)
 Frame = +3

Query: 30   PNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRKRKKVEANKV 209
            P  Y++N+LI  LC +G L DAR++   M   G  P+  +++ L++GYCR     E  ++
Sbjct: 149  PETYTFNLLIRALCDSGRLEDARKLFDKMSDKGCRPNEFSFAILVRGYCRAGLADEGLEL 208

Query: 210  LNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSCNIVIDGLCR 389
            +  M   G  PN    N L+ S  R+G   +AE ++++M E G   D+V+ N  I  LCR
Sbjct: 209  MELMRSLGFSPNRVVYNTLISSFCRDGKTEDAEKMVERMREDGMFPDVVTFNSRISALCR 268

Query: 390  SGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYSTVINGLCRDGRL 569
            +GK+ +A  I  +M                  +DE+     P++ITY+ ++ G C++G L
Sbjct: 269  TGKILEASRIFRDM-----------------QLDEDLGLPRPNIITYNLMLEGFCKEGML 311

Query: 570  EEAKK--KFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCNKTLQTYN 743
            EEAK     +   G +L  +S  Y+I+L  L + GK+  A  VL++M  KG   ++ +YN
Sbjct: 312  EEAKTLVDAVTKNGGSLNLES--YNIWLMGLVRNGKLVEAQAVLQEMVEKGVEPSIHSYN 369

Query: 744  CLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQR 923
             LI GL     + +   +MD M +RG+SP+  TY+ +L+  C   K  EA  +L EM++ 
Sbjct: 370  ILIDGLCKNRMLSDARMVMDLMVDRGISPDTITYSTLLHGYCSNGKVFEANNVLYEMIRN 429

Query: 924  GITPNIYSFKLLIKTFCRTGEFRPAKDVFE 1013
            G +P I++  +L+ +  + G    A+D+ +
Sbjct: 430  GCSPTIFTCNILLHSLYKEGRISEAEDLLQ 459



 Score =  171 bits (432), Expect = 1e-39
 Identities = 108/407 (26%), Positives = 200/407 (49%), Gaps = 5/407 (1%)
 Frame = +3

Query: 21   GPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRKRKKVEA 200
            G  P  Y YN+L +   +   +     +   M+ A +SP+  T++ L++  C   +  +A
Sbjct: 111  GDPPCIYLYNVLFECCVRKQHMDYLMWLYKDMVVAKVSPETYTFNLLIRALCDSGRLEDA 170

Query: 201  NKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSCNIVIDG 380
             K+ ++M   GC PN ++  IL+    R G   E   LM+ M   G   + V  N +I  
Sbjct: 171  RKLFDKMSDKGCRPNEFSFAILVRGYCRAGLADEGLELMELMRSLGFSPNRVVYNTLISS 230

Query: 381  LCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYSTVINGLCRD 560
             CR GK + A ++V  M   G                       PD++T+++ I+ LCR 
Sbjct: 231  FCRDGKTEDAEKMVERMREDG---------------------MFPDVVTFNSRISALCRT 269

Query: 561  GRLEEAKKKFIEM-LGRNL---YPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCNKT 728
            G++ EA + F +M L  +L    P+   Y++ L   CK G +  A  ++  + + G +  
Sbjct: 270  GKILEASRIFRDMQLDEDLGLPRPNIITYNLMLEGFCKEGMLEEAKTLVDAVTKNGGSLN 329

Query: 729  LQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLD 908
            L++YN  + GL    ++ E   ++ EM E+GV P++++YNI+++ LC+     +A  ++D
Sbjct: 330  LESYNIWLMGLVRNGKLVEAQAVLQEMVEKGVEPSIHSYNILIDGLCKNRMLSDARMVMD 389

Query: 909  EMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDV-FEIAISVYGHEEVLYSLMFNELLAGG 1085
             M+ RGI+P+  ++  L+  +C  G+   A +V +E+  +         +++ + L   G
Sbjct: 390  LMVDRGISPDTITYSTLLHGYCSNGKVFEANNVLYEMIRNGCSPTIFTCNILLHSLYKEG 449

Query: 1086 EILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKM 1226
             I EA+ L +   +R +DL++     +I+ LC     D A +I+ +M
Sbjct: 450  RISEAEDLLQKMNERGYDLDTVTCNIIIHGLCNCGKLDKAIEIVNEM 496



 Score = 89.0 bits (219), Expect = 7e-15
 Identities = 59/247 (23%), Positives = 111/247 (44%), Gaps = 5/247 (2%)
 Frame = +3

Query: 513  PDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQV 692
            P +  Y+ +     R   ++     + +M+   + P++  +++ +  LC  G++  A ++
Sbjct: 114  PCIYLYNVLFECCVRKQHMDYLMWLYKDMVVAKVSPETYTFNLLIRALCDSGRLEDARKL 173

Query: 693  LKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCE 872
               M  KGC     ++  L+ G        E   LM+ M+  G SPN   YN +++S C 
Sbjct: 174  FDKMSDKGCRPNEFSFAILVRGYCRAGLADEGLELMELMRSLGFSPNRVVYNTLISSFCR 233

Query: 873  GEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVF-----EIAISVYGH 1037
              K+E+A  +++ M + G+ P++ +F   I   CRTG+   A  +F     +  + +   
Sbjct: 234  DGKTEDAEKMVERMREDGMFPDVVTFNSRISALCRTGKILEASRIFRDMQLDEDLGLPRP 293

Query: 1038 EEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDIL 1217
              + Y+LM       G + EAK L +A       LN   Y   +  L        A+ +L
Sbjct: 294  NIITYNLMLEGFCKEGMLEEAKTLVDAVTKNGGSLNLESYNIWLMGLVRNGKLVEAQAVL 353

Query: 1218 KKMVQIG 1238
            ++MV+ G
Sbjct: 354  QEMVEKG 360



 Score = 59.3 bits (142), Expect = 6e-06
 Identities = 61/235 (25%), Positives = 101/235 (42%), Gaps = 1/235 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M  +G      +YN LI GL     + +   ++  M   G+SP+V TY+ +L+  C  
Sbjct: 587  KDMEKNGCSKTLQTYNSLILGLGSKAQIFEIHGLLNEMRERGVSPNVCTYNNILKCLCEG 646

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEA-EMLMQKMNERGDGLDIVS 359
             K  +A   L+EM + G L N  +  +L+    + G    A E     ++  G    I S
Sbjct: 647  SKIEDAISCLDEMQQRGIL-NVSSFRMLVRVFCKAGEFRVAQEAFKTALSMCGHKEGIYS 705

Query: 360  CNIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYSTV 539
              ++ + L  +G++ +A EI  E     S  LGN                      Y  +
Sbjct: 706  --LMFNELLLAGEVSEAKEIF-EAALEKSYDLGN--------------------FLYKVL 742

Query: 540  INGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDM 704
            I+GLC+D +LEEA     +M+ +    D   +   +  L +RGK   A ++ + M
Sbjct: 743  IDGLCKDEKLEEATGIIYKMIDKGYGFDPASFMPVIDALGERGKKHEADELAEKM 797


>ref|XP_006486600.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140-like
            [Citrus sinensis] gi|568866524|ref|XP_006486605.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g17140-like [Citrus sinensis]
          Length = 889

 Score =  651 bits (1680), Expect = 0.0
 Identities = 317/520 (60%), Positives = 405/520 (77%), Gaps = 2/520 (0%)
 Frame = +3

Query: 9    MADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRKRK 188
            M + G +P+ +SYNILIDGLCKN ML+DAR V+ LM+  GISPD  TYSTLL GYC   K
Sbjct: 356  MVEKGVEPSIHSYNILIDGLCKNRMLSDARMVMDLMVDRGISPDTITYSTLLHGYCSNGK 415

Query: 189  KVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSCNI 368
              EAN VL EMIR GC P  +TCNILLHSL++EG ++EAE L+QKMNERG GLD V+CNI
Sbjct: 416  VFEANNVLYEMIRNGCSPTIFTCNILLHSLYKEGRISEAEDLLQKMNERGYGLDTVTCNI 475

Query: 369  VIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDE--NRKRCLPDLITYSTVI 542
            +I GLC  GKLDKA+EIV+EMWT GSAALGNLGN ++   D+  ++K+C PDLITYSTVI
Sbjct: 476  IIHGLCNCGKLDKAIEIVNEMWTKGSAALGNLGNFFVVPADDTNSKKKCFPDLITYSTVI 535

Query: 543  NGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCN 722
            + LC+ G+L+EAKKKF EM+G+N+ PDS VYD F+++ CK GK+SSAF+VLKDME+ GC+
Sbjct: 536  SALCKAGKLDEAKKKFTEMMGKNVRPDSFVYDNFIHSYCKEGKLSSAFRVLKDMEKNGCS 595

Query: 723  KTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFL 902
            KTLQTYN LI G GS  QIFE+ GL++EM+ERGVSPNV TYN +L  LCEG K E+A   
Sbjct: 596  KTLQTYNSLILGFGSKAQIFEIHGLLNEMRERGVSPNVCTYNNILKCLCEGSKIEDAISC 655

Query: 903  LDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELLAG 1082
            LDEM QRGI  N+ SF++L++ FC+ GEFR A++ F+ A+S+ GH+E +YSLMFNELL  
Sbjct: 656  LDEMQQRGIL-NVSSFRMLVRVFCKAGEFRVAQEAFKTALSMCGHKEGIYSLMFNELLLA 714

Query: 1083 GEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPALF 1262
            GE+ EAK++FEAAL++ +DL +F YK LI+ LC +E  + A  I+ KM+  G  FDPA F
Sbjct: 715  GEVSEAKEIFEAALEKSYDLGNFLYKVLIDGLCKDEKLEEATGIIYKMIDKGYGFDPASF 774

Query: 1263 MPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQTIL 1442
            MPVID LG RGKKHE +EL E+M+ M+S+ ++ +K+ ++  +L   +Q K+GGS WQ IL
Sbjct: 775  MPVIDALGERGKKHEADELAEKMMEMTSDGRVAHKISQNAGELVRRKQNKNGGSVWQDIL 834

Query: 1443 HRDDGSAIAMKTLKRVQKGWGQGNLSYFQAQRNDFLDDWD 1562
            HR+DGS IA+KTLKRVQKGWGQG++S  QAQ+ D LD W+
Sbjct: 835  HREDGSGIALKTLKRVQKGWGQGSISSLQAQKYDLLDYWE 874



 Score =  191 bits (485), Expect = 1e-45
 Identities = 130/464 (28%), Positives = 223/464 (48%), Gaps = 24/464 (5%)
 Frame = +3

Query: 9    MADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRKRK 188
            M+D G +PN +S+ IL+ G C+ G+  +   ++ LM S G SP+   Y+TL+  +CR  K
Sbjct: 177  MSDKGCRPNEFSFAILVRGYCRAGLADEGLELMELMRSLGFSPNRVVYNTLISSFCRDGK 236

Query: 189  KVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGD-GL---DIV 356
              +A K++  M   G  P+  T N  + +L R G + EA  + + M    D GL   +I+
Sbjct: 237  TDDAEKMVERMREDGMFPDVVTFNSRISALCRTGKILEASRIFRDMQLDEDLGLPRPNII 296

Query: 357  SCNIVIDGLCRSGKLDKAVEIVS--------------EMWTHGSAALGNLGNLYIGLVDE 494
            + N++++G C+ G L++A  +V                +W  G    G L      L + 
Sbjct: 297  TYNLMLEGFCKEGMLEEAKTLVDAVTKNGGSLNLESYNIWLMGLVRNGKLVEAQAVLQEM 356

Query: 495  NRKRCLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKI 674
              K   P + +Y+ +I+GLC++  L +A+     M+ R + PD+  Y   L+  C  GK+
Sbjct: 357  VEKGVEPSIHSYNILIDGLCKNRMLSDARMVMDLMVDRGISPDTITYSTLLHGYCSNGKV 416

Query: 675  SSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIV 854
              A  VL +M R GC+ T+ T N L+  L    +I E   L+ +M ERG   +  T NI+
Sbjct: 417  FEANNVLYEMIRNGCSPTIFTCNILLHSLYKEGRISEAEDLLQKMNERGYGLDTVTCNII 476

Query: 855  LNSLCEGEKSEEAAFLLDEMLQRGITP--NIYSFKLLIKTFCRTGEFRPAKDVFEIAISV 1028
            ++ LC   K ++A  +++EM  +G     N+ +F ++        +    K  F      
Sbjct: 477  IHGLCNCGKLDKAIEIVNEMWTKGSAALGNLGNFFVV-----PADDTNSKKKCFP----- 526

Query: 1029 YGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYAR 1208
               + + YS + + L   G++ EAK+ F   + +    +SF Y + I+  C E     A 
Sbjct: 527  ---DLITYSTVISALCKAGKLDEAKKKFTEMMGKNVRPDSFVYDNFIHSYCKEGKLSSAF 583

Query: 1209 DILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEV----NELTER 1328
             +LK M + GC      +  +I   G++ +  E+    NE+ ER
Sbjct: 584  RVLKDMEKNGCSKTLQTYNSLILGFGSKAQIFEIHGLLNEMRER 627



 Score =  179 bits (455), Expect = 3e-42
 Identities = 127/426 (29%), Positives = 214/426 (50%), Gaps = 26/426 (6%)
 Frame = +3

Query: 30   PNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRKRKKVEANKV 209
            P  Y++N+LI  LC +G L DAR++   M   G  P+  +++ L++GYCR     E  ++
Sbjct: 149  PETYTFNLLIRALCDSGRLEDARKLFDKMSDKGCRPNEFSFAILVRGYCRAGLADEGLEL 208

Query: 210  LNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSCNIVIDGLCR 389
            +  M   G  PN    N L+ S  R+G   +AE ++++M E G   D+V+ N  I  LCR
Sbjct: 209  MELMRSLGFSPNRVVYNTLISSFCRDGKTDDAEKMVERMREDGMFPDVVTFNSRISALCR 268

Query: 390  SGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYSTVINGLCRDGRL 569
            +GK+ +A  I  +M                  +DE+     P++ITY+ ++ G C++G L
Sbjct: 269  TGKILEASRIFRDM-----------------QLDEDLGLPRPNIITYNLMLEGFCKEGML 311

Query: 570  EEAKK--KFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCNKTLQTYN 743
            EEAK     +   G +L  +S  Y+I+L  L + GK+  A  VL++M  KG   ++ +YN
Sbjct: 312  EEAKTLVDAVTKNGGSLNLES--YNIWLMGLVRNGKLVEAQAVLQEMVEKGVEPSIHSYN 369

Query: 744  CLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQR 923
             LI GL     + +   +MD M +RG+SP+  TY+ +L+  C   K  EA  +L EM++ 
Sbjct: 370  ILIDGLCKNRMLSDARMVMDLMVDRGISPDTITYSTLLHGYCSNGKVFEANNVLYEMIRN 429

Query: 924  GITPNIYSFKLLIKTFCRTGEFRPAKDVFE-IAISVYGHEEVLYSLMFNELLAGGEILEA 1100
            G +P I++  +L+ +  + G    A+D+ + +    YG + V  +++ + L   G++ +A
Sbjct: 430  GCSPTIFTCNILLHSLYKEGRISEAEDLLQKMNERGYGLDTVTCNIIIHGLCNCGKLDKA 489

Query: 1101 KQLFE----------AALDRFF-----DLNS--FCYKDL------INRLCVEENFDYARD 1211
             ++              L  FF     D NS   C+ DL      I+ LC     D A+ 
Sbjct: 490  IEIVNEMWTKGSAALGNLGNFFVVPADDTNSKKKCFPDLITYSTVISALCKAGKLDEAKK 549

Query: 1212 ILKKMV 1229
               +M+
Sbjct: 550  KFTEMM 555



 Score =  169 bits (429), Expect = 3e-39
 Identities = 108/407 (26%), Positives = 199/407 (48%), Gaps = 5/407 (1%)
 Frame = +3

Query: 21   GPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRKRKKVEA 200
            G  P  Y YN+L +   +   +     +   M+ A +SP+  T++ L++  C   +  +A
Sbjct: 111  GDPPCIYLYNVLFECCVRKQHMDYLMWLYKDMVVAKVSPETYTFNLLIRALCDSGRLEDA 170

Query: 201  NKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSCNIVIDG 380
             K+ ++M   GC PN ++  IL+    R G   E   LM+ M   G   + V  N +I  
Sbjct: 171  RKLFDKMSDKGCRPNEFSFAILVRGYCRAGLADEGLELMELMRSLGFSPNRVVYNTLISS 230

Query: 381  LCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYSTVINGLCRD 560
             CR GK D A ++V  M   G                       PD++T+++ I+ LCR 
Sbjct: 231  FCRDGKTDDAEKMVERMREDG---------------------MFPDVVTFNSRISALCRT 269

Query: 561  GRLEEAKKKFIEM-LGRNL---YPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCNKT 728
            G++ EA + F +M L  +L    P+   Y++ L   CK G +  A  ++  + + G +  
Sbjct: 270  GKILEASRIFRDMQLDEDLGLPRPNIITYNLMLEGFCKEGMLEEAKTLVDAVTKNGGSLN 329

Query: 729  LQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLD 908
            L++YN  + GL    ++ E   ++ EM E+GV P++++YNI+++ LC+     +A  ++D
Sbjct: 330  LESYNIWLMGLVRNGKLVEAQAVLQEMVEKGVEPSIHSYNILIDGLCKNRMLSDARMVMD 389

Query: 909  EMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDV-FEIAISVYGHEEVLYSLMFNELLAGG 1085
             M+ RGI+P+  ++  L+  +C  G+   A +V +E+  +         +++ + L   G
Sbjct: 390  LMVDRGISPDTITYSTLLHGYCSNGKVFEANNVLYEMIRNGCSPTIFTCNILLHSLYKEG 449

Query: 1086 EILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKM 1226
             I EA+ L +   +R + L++     +I+ LC     D A +I+ +M
Sbjct: 450  RISEAEDLLQKMNERGYGLDTVTCNIIIHGLCNCGKLDKAIEIVNEM 496



 Score = 87.8 bits (216), Expect = 2e-14
 Identities = 58/247 (23%), Positives = 111/247 (44%), Gaps = 5/247 (2%)
 Frame = +3

Query: 513  PDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQV 692
            P +  Y+ +     R   ++     + +M+   + P++  +++ +  LC  G++  A ++
Sbjct: 114  PCIYLYNVLFECCVRKQHMDYLMWLYKDMVVAKVSPETYTFNLLIRALCDSGRLEDARKL 173

Query: 693  LKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCE 872
               M  KGC     ++  L+ G        E   LM+ M+  G SPN   YN +++S C 
Sbjct: 174  FDKMSDKGCRPNEFSFAILVRGYCRAGLADEGLELMELMRSLGFSPNRVVYNTLISSFCR 233

Query: 873  GEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVF-----EIAISVYGH 1037
              K+++A  +++ M + G+ P++ +F   I   CRTG+   A  +F     +  + +   
Sbjct: 234  DGKTDDAEKMVERMREDGMFPDVVTFNSRISALCRTGKILEASRIFRDMQLDEDLGLPRP 293

Query: 1038 EEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDIL 1217
              + Y+LM       G + EAK L +A       LN   Y   +  L        A+ +L
Sbjct: 294  NIITYNLMLEGFCKEGMLEEAKTLVDAVTKNGGSLNLESYNIWLMGLVRNGKLVEAQAVL 353

Query: 1218 KKMVQIG 1238
            ++MV+ G
Sbjct: 354  QEMVEKG 360


>ref|XP_002328265.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  642 bits (1656), Expect = 0.0
 Identities = 308/484 (63%), Positives = 389/484 (80%), Gaps = 2/484 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M D G +PN YSYNI++DGLCKNG+L DAR ++ LM S+G+ PD  TY+TLL GYC  
Sbjct: 259  KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
             K  EAN VL EM+R GC PN YTCNILL+SLW+EG ++EAE L+QKMNE+G  +D V+C
Sbjct: 319  GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTC 378

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDEN--RKRCLPDLITYST 536
            NIVIDGLC +GKLDKA+EIV+ MWTHGSAALGNLGN YIGLVD++  RK+C+PDLI+YST
Sbjct: 379  NIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYST 438

Query: 537  VINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKG 716
            +I+GLC+ GR+ EAKKKFIEM+G+NL PDS +YD+F+++ CK GKISSAF+VLKDME+KG
Sbjct: 439  IISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKG 498

Query: 717  CNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAA 896
            CNKTLQTYN LI GLGS NQIFE++GL+DEM+ERGVSP+V  YN VL+SLCEG + ++A 
Sbjct: 499  CNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAP 558

Query: 897  FLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELL 1076
             +LDEMLQ+GI+PNI SF +LIK FC+  +F    ++FEIA++V GH+E LYSL FNELL
Sbjct: 559  SVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELL 618

Query: 1077 AGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPA 1256
             GGE+++AK+LFE ALDR FD+ +F YKDLI+ LC +E  D A  IL K++  G  FDPA
Sbjct: 619  VGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPA 678

Query: 1257 LFMPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQT 1436
             FMPVID LG RG KHE +EL E+M+ M+SE +++NKV ++      G++ KDG S+WQT
Sbjct: 679  SFMPVIDGLGKRGNKHEADELAEKMMEMASEGKVKNKVHQNASCSIQGKKNKDGESEWQT 738

Query: 1437 ILHR 1448
            ILHR
Sbjct: 739  ILHR 742



 Score =  172 bits (437), Expect = 4e-40
 Identities = 107/337 (31%), Positives = 169/337 (50%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M   G  P  Y++N+LI  LC +G L DAR +   M   G  P+  ++  L++GYCR 
Sbjct: 45   KDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRA 104

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
                +  ++L EM R G  PN    N L+ S  +EG   +AE L+ +M + G   D+V+ 
Sbjct: 105  GFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTF 164

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYSTVI 542
            N  I  LC SGK+ +A  I  +M                  +DE      P++ITY+ ++
Sbjct: 165  NARISALCSSGKVLEASRIFRDMQ-----------------IDEVLGLPQPNIITYNLML 207

Query: 543  NGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCN 722
             G C++G LEEA+  F +M       +   Y+I+L  L + GK+  A  VLK+M   G  
Sbjct: 208  GGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGME 267

Query: 723  KTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFL 902
              + +YN ++ GL     +F+   LM  M   GV P+  TY  +L+  C   K  EA  +
Sbjct: 268  PNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNV 327

Query: 903  LDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFE 1013
            L EM++ G +PN Y+  +L+ +  + G    A+++ +
Sbjct: 328  LREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQ 364



 Score =  147 bits (370), Expect = 2e-32
 Identities = 108/385 (28%), Positives = 185/385 (48%), Gaps = 21/385 (5%)
 Frame = +3

Query: 135  PDVATYSTLLQGYCRKRKKVEANKVL-NEMIRGGCLPNTYTCNILLHSLWREGNVTEAEM 311
            P +  Y+ LL+  C K  +V+    L  +M+  G  P TYT N+L+  L   G + +A  
Sbjct: 19   PSIYLYNVLLRS-CTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARE 77

Query: 312  LMQKMNERGDGLDIVSCNIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIG--- 482
            L  KM E+G   +  S  I++ G CR+G   K +E++ EM   G +    + N  I    
Sbjct: 78   LFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFC 137

Query: 483  ----------LVDENRKRCL-PDLITYSTVINGLCRDGRLEEAKKKFIEM-----LGRNL 614
                      LVDE RK  L PD++T++  I+ LC  G++ EA + F +M     LG   
Sbjct: 138  KEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLP- 196

Query: 615  YPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFG 794
             P+   Y++ L   CK G +  A  + + M+        ++YN  + GL    ++ E   
Sbjct: 197  QPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQL 256

Query: 795  LMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFC 974
            ++ EM + G+ PNVY+YNIV++ LC+     +A  L+  M   G+ P+  ++  L+  +C
Sbjct: 257  VLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYC 316

Query: 975  RTGEFRPAKDVF-EIAISVYGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSF 1151
             TG+   A +V  E+            +++   L   G I EA++L +   ++ + +++ 
Sbjct: 317  HTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTV 376

Query: 1152 CYKDLINRLCVEENFDYARDILKKM 1226
                +I+ LC     D A +I+  M
Sbjct: 377  TCNIVIDGLCNNGKLDKAIEIVNGM 401



 Score = 95.1 bits (235), Expect = 1e-16
 Identities = 68/281 (24%), Positives = 130/281 (46%), Gaps = 8/281 (2%)
 Frame = +3

Query: 513  PDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQV 692
            P +  Y+ ++    ++GR++       +M+   + P++  +++ +  LC  G +  A ++
Sbjct: 19   PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 693  LKDMERKGCNKTLQTYNCLIFGL---GSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNS 863
               M  KGC     ++  L+ G    G T++  E+ G   EM+  G SPN   YN +++S
Sbjct: 79   FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLG---EMRRLGFSPNKVVYNTLISS 135

Query: 864  LCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVF-----EIAISV 1028
             C+  K+++A  L+DEM + G++P++ +F   I   C +G+   A  +F     +  + +
Sbjct: 136  FCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGL 195

Query: 1029 YGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYAR 1208
                 + Y+LM       G + EA+ LFE        +N   Y   +  L        A+
Sbjct: 196  PQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQ 255

Query: 1209 DILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELTERM 1331
             +LK+MV +G + +   +  V+D L   G   +   L   M
Sbjct: 256  LVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLM 296


>ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140-like
            [Cucumis sativus]
          Length = 875

 Score =  635 bits (1637), Expect = e-179
 Identities = 312/520 (60%), Positives = 396/520 (76%), Gaps = 2/520 (0%)
 Frame = +3

Query: 9    MADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRKRK 188
            MA+   +PN YSYNIL+ GLCK GM +DAR ++GLM  +G++PD  TYSTLL GYCR+ K
Sbjct: 357  MAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGK 416

Query: 189  KVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSCNI 368
             +EAN VL EMI+ GC PN YTCNILLHSLW+EG  +EAE L+Q MNERG GLD V+CN 
Sbjct: 417  ILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNT 476

Query: 369  VIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVD--ENRKRCLPDLITYSTVI 542
            +I+GLC++G LDKA+EIVS MWT GSA+LGNLGN +I L D   N K+CLPD ITY+T+I
Sbjct: 477  MINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATII 536

Query: 543  NGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCN 722
             GLC+ GR++EAKKK +EM+G+ L PDS ++D F+YN CK+GK+SSAF+VLK+ME+KGCN
Sbjct: 537  GGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCN 596

Query: 723  KTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFL 902
            K+L+TYN LI GLGS NQIFE++GLMDEMKERG+ PNVYTYN +++ L EG K ++A  L
Sbjct: 597  KSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCL 656

Query: 903  LDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELLAG 1082
            LDEMLQ+GI+PNIY+F++LI  F +  +F  A+++FEIA+S+ GH+E LYS MFNELLAG
Sbjct: 657  LDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAG 716

Query: 1083 GEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPALF 1262
            GE L+AK+LFEAALDR   L +F Y+DLI +LC +   D A  IL KM+     FDPA F
Sbjct: 717  GETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASF 776

Query: 1263 MPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQTIL 1442
            MPVID LG RG KH  +E  ERM+ M+SE       + ++K +  GR   +  SDWQ I+
Sbjct: 777  MPVIDELGKRGSKHAADEFAERMMEMASETDFN---EHENKNI-RGRLNNNDESDWQKIV 832

Query: 1443 HRDDGSAIAMKTLKRVQKGWGQGNLSYFQAQRNDFLDDWD 1562
            HR+DGS IA KTLKRV KGWGQG+++  Q Q+    D WD
Sbjct: 833  HRNDGSGIAQKTLKRVLKGWGQGSIATCQPQKFSTRDHWD 872



 Score =  187 bits (474), Expect = 2e-44
 Identities = 132/441 (29%), Positives = 203/441 (46%), Gaps = 24/441 (5%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K MA    +P  Y++N+LI  LC+ G L +AR V   M   G  P+  +   L++GYCR 
Sbjct: 142  KDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRA 201

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
                    +L+EM   G LPN    N ++ SL  EG   EAE L++KM E G   DIV+ 
Sbjct: 202  GLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTF 261

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYSTVI 542
            N  I  LC+SG++ +A  I  +M                  +DE      P+ +TY+ ++
Sbjct: 262  NCRIAALCKSGQILEASRIFRDM-----------------QIDEEMGLPKPNTVTYNLML 304

Query: 543  NGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCN 722
             G C +G  EEA+  F  M           Y+I++  L + GK+  A  +L +M  K   
Sbjct: 305  EGFCSEGMFEEARAIFDSMKNSETL-SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIK 363

Query: 723  KTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFL 902
              L +YN L+ GL       +   ++  M+E GV+P+  TY+ +L+  C   K  EA ++
Sbjct: 364  PNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYV 423

Query: 903  LDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAIS-VYGHEEVLYSLMFNELLA 1079
            L EM+Q G  PN+Y+  +L+ +  + G    A+D+ ++     YG + V  + M N L  
Sbjct: 424  LREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCK 483

Query: 1080 GGEILEAKQLFEAALDR-----------FFDL------------NSFCYKDLINRLCVEE 1190
             G + +A ++      R           F DL            +S  Y  +I  LC   
Sbjct: 484  AGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVG 543

Query: 1191 NFDYARDILKKMVQIGCKFDP 1253
              D A+  L +M  IG K  P
Sbjct: 544  RVDEAKKKLLEM--IGKKLSP 562



 Score = 90.5 bits (223), Expect = 2e-15
 Identities = 71/313 (22%), Positives = 132/313 (42%), Gaps = 39/313 (12%)
 Frame = +3

Query: 513  PDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQV 692
            P +  Y+ +     ++ R++     + +M    + P +  +++ +  LC+ G + +A +V
Sbjct: 116  PPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 693  LKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCE 872
               M  KGC     +   L+ G            L+DEM+  G  PN   YN V++SLC 
Sbjct: 176  FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235

Query: 873  GEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPA------------------ 998
              ++ EA  L+++M + G++P+I +F   I   C++G+   A                  
Sbjct: 236  EGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKP 295

Query: 999  --------------KDVFEIAISVYG---HEEVL----YSLMFNELLAGGEILEAKQLFE 1115
                          + +FE A +++    + E L    Y++    L+  G++LEA  +  
Sbjct: 296  NTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILN 355

Query: 1116 AALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPALFMPVIDYLGTRG 1295
               ++    N + Y  L++ LC    F  AR IL  M + G   D   +  ++     RG
Sbjct: 356  EMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRG 415

Query: 1296 KKHEVNELTERML 1334
            K  E N +   M+
Sbjct: 416  KILEANYVLREMI 428



 Score = 73.2 bits (178), Expect = 4e-10
 Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 7/238 (2%)
 Frame = +3

Query: 534  TVINGLCRDGRLEEAKKKFIEMLGRNLY--PDSTVYDIFLYNLCKRGKISSAFQVLKDME 707
            +++  L   G LE A  +F  +  R  +  P  + Y++      K  ++     + KDM 
Sbjct: 86   SLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145

Query: 708  RKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSE 887
                     T+N LI  L     +     + D+M E+G  PN ++  I++   C      
Sbjct: 146  VAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHS 205

Query: 888  EAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISV-YGHEEVLYSLMF 1064
                LLDEM   G  PN  ++  +I + C  G+   A+ + E    V    + V ++   
Sbjct: 206  HGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRI 265

Query: 1065 NELLAGGEILEAKQLF-EAALDRFFDL---NSFCYKDLINRLCVEENFDYARDILKKM 1226
              L   G+ILEA ++F +  +D    L   N+  Y  ++   C E  F+ AR I   M
Sbjct: 266  AALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSM 323


>ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140-like
            [Cucumis sativus] gi|449472527|ref|XP_004153621.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  635 bits (1637), Expect = e-179
 Identities = 312/520 (60%), Positives = 396/520 (76%), Gaps = 2/520 (0%)
 Frame = +3

Query: 9    MADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRKRK 188
            MA+   +PN YSYNIL+ GLCK GM +DAR ++GLM  +G++PD  TYSTLL GYCR+ K
Sbjct: 357  MAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGK 416

Query: 189  KVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSCNI 368
             +EAN VL EMI+ GC PN YTCNILLHSLW+EG  +EAE L+Q MNERG GLD V+CN 
Sbjct: 417  ILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNT 476

Query: 369  VIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVD--ENRKRCLPDLITYSTVI 542
            +I+GLC++G LDKA+EIVS MWT GSA+LGNLGN +I L D   N K+CLPD ITY+T+I
Sbjct: 477  MINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATII 536

Query: 543  NGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCN 722
             GLC+ GR++EAKKK +EM+G+ L PDS ++D F+YN CK+GK+SSAF+VLK+ME+KGCN
Sbjct: 537  GGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCN 596

Query: 723  KTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFL 902
            K+L+TYN LI GLGS NQIFE++GLMDEMKERG+ PNVYTYN +++ L EG K ++A  L
Sbjct: 597  KSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCL 656

Query: 903  LDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELLAG 1082
            LDEMLQ+GI+PNIY+F++LI  F +  +F  A+++FEIA+S+ GH+E LYS MFNELLAG
Sbjct: 657  LDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAG 716

Query: 1083 GEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPALF 1262
            GE L+AK+LFEAALDR   L +F Y+DLI +LC +   D A  IL KM+     FDPA F
Sbjct: 717  GETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASF 776

Query: 1263 MPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQTIL 1442
            MPVID LG RG KH  +E  ERM+ M+SE       + ++K +  GR   +  SDWQ I+
Sbjct: 777  MPVIDELGKRGSKHAADEFAERMMEMASETDFN---EHENKNI-RGRLNNNDESDWQKIV 832

Query: 1443 HRDDGSAIAMKTLKRVQKGWGQGNLSYFQAQRNDFLDDWD 1562
            HR+DGS IA KTLKRV KGWGQG+++  Q Q+    D WD
Sbjct: 833  HRNDGSGIAQKTLKRVLKGWGQGSIATSQPQKFSTRDHWD 872



 Score =  187 bits (474), Expect = 2e-44
 Identities = 132/441 (29%), Positives = 203/441 (46%), Gaps = 24/441 (5%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K MA    +P  Y++N+LI  LC+ G L +AR V   M   G  P+  +   L++GYCR 
Sbjct: 142  KDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRA 201

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
                    +L+EM   G LPN    N ++ SL  EG   EAE L++KM E G   DIV+ 
Sbjct: 202  GLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTF 261

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYSTVI 542
            N  I  LC+SG++ +A  I  +M                  +DE      P+ +TY+ ++
Sbjct: 262  NCRIAALCKSGQILEASRIFRDM-----------------QIDEEMGLPKPNTVTYNLML 304

Query: 543  NGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCN 722
             G C +G  EEA+  F  M           Y+I++  L + GK+  A  +L +M  K   
Sbjct: 305  EGFCSEGMFEEARAIFDSMKNSETL-SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIK 363

Query: 723  KTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFL 902
              L +YN L+ GL       +   ++  M+E GV+P+  TY+ +L+  C   K  EA ++
Sbjct: 364  PNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYV 423

Query: 903  LDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAIS-VYGHEEVLYSLMFNELLA 1079
            L EM+Q G  PN+Y+  +L+ +  + G    A+D+ ++     YG + V  + M N L  
Sbjct: 424  LREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCK 483

Query: 1080 GGEILEAKQLFEAALDR-----------FFDL------------NSFCYKDLINRLCVEE 1190
             G + +A ++      R           F DL            +S  Y  +I  LC   
Sbjct: 484  AGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVG 543

Query: 1191 NFDYARDILKKMVQIGCKFDP 1253
              D A+  L +M  IG K  P
Sbjct: 544  RVDEAKKKLLEM--IGKKLSP 562



 Score = 90.5 bits (223), Expect = 2e-15
 Identities = 71/313 (22%), Positives = 132/313 (42%), Gaps = 39/313 (12%)
 Frame = +3

Query: 513  PDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQV 692
            P +  Y+ +     ++ R++     + +M    + P +  +++ +  LC+ G + +A +V
Sbjct: 116  PPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 693  LKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCE 872
               M  KGC     +   L+ G            L+DEM+  G  PN   YN V++SLC 
Sbjct: 176  FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235

Query: 873  GEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPA------------------ 998
              ++ EA  L+++M + G++P+I +F   I   C++G+   A                  
Sbjct: 236  EGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKP 295

Query: 999  --------------KDVFEIAISVYG---HEEVL----YSLMFNELLAGGEILEAKQLFE 1115
                          + +FE A +++    + E L    Y++    L+  G++LEA  +  
Sbjct: 296  NTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILN 355

Query: 1116 AALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPALFMPVIDYLGTRG 1295
               ++    N + Y  L++ LC    F  AR IL  M + G   D   +  ++     RG
Sbjct: 356  EMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRG 415

Query: 1296 KKHEVNELTERML 1334
            K  E N +   M+
Sbjct: 416  KILEANYVLREMI 428



 Score = 73.2 bits (178), Expect = 4e-10
 Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 7/238 (2%)
 Frame = +3

Query: 534  TVINGLCRDGRLEEAKKKFIEMLGRNLY--PDSTVYDIFLYNLCKRGKISSAFQVLKDME 707
            +++  L   G LE A  +F  +  R  +  P  + Y++      K  ++     + KDM 
Sbjct: 86   SLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145

Query: 708  RKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSE 887
                     T+N LI  L     +     + D+M E+G  PN ++  I++   C      
Sbjct: 146  VARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHS 205

Query: 888  EAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISV-YGHEEVLYSLMF 1064
                LLDEM   G  PN  ++  +I + C  G+   A+ + E    V    + V ++   
Sbjct: 206  HGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRI 265

Query: 1065 NELLAGGEILEAKQLF-EAALDRFFDL---NSFCYKDLINRLCVEENFDYARDILKKM 1226
              L   G+ILEA ++F +  +D    L   N+  Y  ++   C E  F+ AR I   M
Sbjct: 266  AALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSM 323


>ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g17140 gi|110737729|dbj|BAF00803.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|330251496|gb|AEC06590.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  632 bits (1629), Expect = e-178
 Identities = 303/522 (58%), Positives = 389/522 (74%), Gaps = 2/522 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M D G  P+ YSYNIL+DGLCK GML+DA+ +VGLM   G+ PD  TY  LL GYC  
Sbjct: 350  KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
             K   A  +L EM+R  CLPN YTCNILLHSLW+ G ++EAE L++KMNE+G GLD V+C
Sbjct: 410  GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDEN--RKRCLPDLITYST 536
            NI++DGLC SG+LDKA+EIV  M  HGSAALGNLGN YIGLVD++     CLPDLITYST
Sbjct: 470  NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529

Query: 537  VINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKG 716
            ++NGLC+ GR  EAK  F EM+G  L PDS  Y+IF+++ CK+GKISSAF+VLKDME+KG
Sbjct: 530  LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589

Query: 717  CNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAA 896
            C+K+L+TYN LI GLG  NQIFE+ GLMDEMKE+G+SPN+ TYN  +  LCEGEK E+A 
Sbjct: 590  CHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDAT 649

Query: 897  FLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELL 1076
             LLDEM+Q+ I PN++SFK LI+ FC+  +F  A++VFE A+S+ G +E LYSLMFNELL
Sbjct: 650  NLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELL 709

Query: 1077 AGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPA 1256
            A G++L+A +L EA LDR F+L +F YKDL+  LC ++  + A  IL KM+  G  FDPA
Sbjct: 710  AAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPA 769

Query: 1257 LFMPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQT 1436
              MPVID LG  G K E N   ++M+ M+S  ++ NKV  + + ++  +  K+GG++WQ 
Sbjct: 770  ALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNARDIHQKKHNKNGGNNWQN 829

Query: 1437 ILHRDDGSAIAMKTLKRVQKGWGQGNLSYFQAQRNDFLDDWD 1562
            ILHRDDGS IA+++L RV+KGWGQG++S FQ  R D+LD W+
Sbjct: 830  ILHRDDGSGIALRSLSRVKKGWGQGDISSFQPPRVDYLDYWE 871



 Score =  171 bits (433), Expect = 1e-39
 Identities = 128/456 (28%), Positives = 211/456 (46%), Gaps = 24/456 (5%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M   G  P  Y++N+LI  LC +  +  AR +   M   G  P+  T+  L++GYC+ 
Sbjct: 136  KDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKA 195

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
                +  ++LN M   G LPN    N ++ S  REG   ++E +++KM E G   DIV+ 
Sbjct: 196  GLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTF 255

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYSTVI 542
            N  I  LC+ GK+  A  I S+M            + Y+GL         P+ ITY+ ++
Sbjct: 256  NSRISALCKEGKVLDASRIFSDMEL----------DEYLGLP-------RPNSITYNLML 298

Query: 543  NGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCN 722
             G C+ G LE+AK  F  +   +       Y+I+L  L + GK   A  VLK M  KG  
Sbjct: 299  KGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIG 358

Query: 723  KTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFL 902
             ++ +YN L+ GL     + +   ++  MK  GV P+  TY  +L+  C   K + A  L
Sbjct: 359  PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418

Query: 903  LDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVF-EIAISVYGHEEVLYSLMFNELLA 1079
            L EM++    PN Y+  +L+ +  + G    A+++  ++    YG + V  +++ + L  
Sbjct: 419  LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478

Query: 1080 GGEILEAKQLFE-------AAL------------DRFFDLNS----FCYKDLINRLCVEE 1190
             GE+ +A ++ +       AAL            D   + N       Y  L+N LC   
Sbjct: 479  SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538

Query: 1191 NFDYARDILKKMVQIGCKFDPALFMPVIDYLGTRGK 1298
             F  A+++  +M+    + D   +   I +   +GK
Sbjct: 539  RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGK 574



 Score =  141 bits (356), Expect = 9e-31
 Identities = 94/383 (24%), Positives = 191/383 (49%), Gaps = 19/383 (4%)
 Frame = +3

Query: 135  PDVATYSTLLQGYCRKRKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEML 314
            P V  Y+ LL+   ++R+    + +  +M+  G  P TYT N+L+ +L     V  A  L
Sbjct: 110  PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169

Query: 315  MQKMNERGDGLDIVSCNIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYI----- 479
              +M E+G   +  +  I++ G C++G  DK +E+++ M + G      + N  +     
Sbjct: 170  FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229

Query: 480  -GLVDENRKR--------CLPDLITYSTVINGLCRDGRLEEAKKKFIEM-LGRNL---YP 620
             G  D++ K          +PD++T+++ I+ LC++G++ +A + F +M L   L    P
Sbjct: 230  EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289

Query: 621  DSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLM 800
            +S  Y++ L   CK G +  A  + + +       +LQ+YN  + GL    +  E   ++
Sbjct: 290  NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349

Query: 801  DEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRT 980
             +M ++G+ P++Y+YNI+++ LC+     +A  ++  M + G+ P+  ++  L+  +C  
Sbjct: 350  KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409

Query: 981  GEFRPAKDVF-EIAISVYGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCY 1157
            G+   AK +  E+  +         +++ + L   G I EA++L     ++ + L++   
Sbjct: 410  GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469

Query: 1158 KDLINRLCVEENFDYARDILKKM 1226
              +++ LC     D A +I+K M
Sbjct: 470  NIIVDGLCGSGELDKAIEIVKGM 492



 Score = 86.3 bits (212), Expect = 5e-14
 Identities = 72/331 (21%), Positives = 144/331 (43%), Gaps = 8/331 (2%)
 Frame = +3

Query: 270  HSLWREGNVTEAEMLMQ-KMNERGDGLDIVSCNIVIDGLCRSGKLDKAVEIVS--EMWTH 440
            H +  +   T A +L++ KM+E    L     N+++    +  KL   + +VS      H
Sbjct: 35   HGISLDATPTIARILVRAKMHEEIQELH----NLILSSSIQKTKLSSLLSVVSIFAKSNH 90

Query: 441  GSAALGNLGNLYIGLVDENRKRCLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYP 620
               A      L      EN+    P +  Y+ ++    ++ R+E     + +M+   + P
Sbjct: 91   IDKAFPQF-QLVRSRFPENK----PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAP 145

Query: 621  DSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLM 800
             +  +++ +  LC    + +A ++  +M  KGC     T+  L+ G        +   L+
Sbjct: 146  QTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELL 205

Query: 801  DEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRT 980
            + M+  GV PN   YN +++S C   +++++  ++++M + G+ P+I +F   I   C+ 
Sbjct: 206  NAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKE 265

Query: 981  GEFRPAKDVF-EIAISVY----GHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLN 1145
            G+   A  +F ++ +  Y        + Y+LM       G + +AK LFE+  +     +
Sbjct: 266  GKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLAS 325

Query: 1146 SFCYKDLINRLCVEENFDYARDILKKMVQIG 1238
               Y   +  L     F  A  +LK+M   G
Sbjct: 326  LQSYNIWLQGLVRHGKFIEAETVLKQMTDKG 356


>ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 874

 Score =  625 bits (1612), Expect = e-176
 Identities = 304/522 (58%), Positives = 385/522 (73%), Gaps = 2/522 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M D G  P+ YSYNIL+DGLCK GML+DA+ +VGLM   G+SPD  TY  LL GYC  
Sbjct: 350  KQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSV 409

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
             K   A  +L EM+R  CLPN YTCNILLHSLW  G ++EAE L++KMNE+G GLD V+C
Sbjct: 410  GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTC 469

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDEN--RKRCLPDLITYST 536
            NI++DGLC SG+LDKA+EIV  M  HGSAALGNLGN YIGLVD++     CLPDLITYST
Sbjct: 470  NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529

Query: 537  VINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKG 716
            ++NGLC+ GR  EAK  F EM+G  L PDS  Y+IF+++ CK+GKISSAF+VLKDME+KG
Sbjct: 530  LLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589

Query: 717  CNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAA 896
            C+K+L+TYN LI GLG  NQIFE+ GLMDEM+E+G+SPN+ TYN  +  LCEG K E+A 
Sbjct: 590  CHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDAT 649

Query: 897  FLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELL 1076
             LLDEM+Q+ I PN++SFK LI  FC+  +F  A++VFE A+S+ G +E LYSLMFNELL
Sbjct: 650  NLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELL 709

Query: 1077 AGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPA 1256
            A G++L+A +L EA LDR F+L +F YKDL+  LC ++  + A  IL KM+  G  FDPA
Sbjct: 710  AAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPA 769

Query: 1257 LFMPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQT 1436
              MPVID LG  G K E N   E+M+ M+S  ++ NKV  +   ++  +  K  G++WQ 
Sbjct: 770  ALMPVIDGLGKMGNKKEANNFAEKMMEMASVGEVANKVDPNATDIHQKKHNKYSGNNWQN 829

Query: 1437 ILHRDDGSAIAMKTLKRVQKGWGQGNLSYFQAQRNDFLDDWD 1562
            ILHRDDGS IA+K+L RV+KGWGQG++S FQ QR D+LD W+
Sbjct: 830  ILHRDDGSGIALKSLSRVKKGWGQGDISSFQPQRVDYLDYWE 871



 Score =  179 bits (454), Expect = 4e-42
 Identities = 134/486 (27%), Positives = 217/486 (44%), Gaps = 43/486 (8%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M   G  P  Y++N+LI  LC +  +  AR +   M   G  P+  T+  L++GYC+ 
Sbjct: 136  KDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKA 195

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
                +  ++LN M   G LPN    N ++ S  REG   ++E L++KM E G   DIV+ 
Sbjct: 196  GLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTF 255

Query: 363  NIVIDGLCRSGKLDKAVEIVSEM-------WTHGSAALGNL---GNLYIGLVDE------ 494
            N  I  LC+ GK+  A  I S+M           ++   NL   G   +GL+++      
Sbjct: 256  NSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFE 315

Query: 495  --NRKRCLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRG 668
                   L  L +Y+  + GL R G+  EA+    +M+ + + P    Y+I +  LCK G
Sbjct: 316  SIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLG 375

Query: 669  KISSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYN 848
             +S A  ++  M+R G +    TY CL+ G  S  ++     L+ EM      PN YT N
Sbjct: 376  MLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435

Query: 849  IVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISV 1028
            I+L+SL    +  EA  LL +M ++G   +  +  +++   C +GE   A ++ +  + V
Sbjct: 436  ILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK-GMRV 494

Query: 1029 YGH-------------------------EEVLYSLMFNELLAGGEILEAKQLFEAALDRF 1133
            +G                          + + YS + N L   G   EAK LF   +   
Sbjct: 495  HGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEK 554

Query: 1134 FDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEVN 1313
               +S  Y   I+  C +     A  +LK M + GC      +  +I  LG + +  E++
Sbjct: 555  LQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIH 614

Query: 1314 ELTERM 1331
             L + M
Sbjct: 615  GLMDEM 620



 Score =  142 bits (357), Expect = 7e-31
 Identities = 95/383 (24%), Positives = 193/383 (50%), Gaps = 19/383 (4%)
 Frame = +3

Query: 135  PDVATYSTLLQGYCRKRKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEML 314
            P +  Y+ LL+   R+R+    + +  +M+  G  P TYT N+L+ +L     V  A  L
Sbjct: 110  PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAAREL 169

Query: 315  MQKMNERGDGLDIVSCNIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIG---- 482
              +M E+G   +  +  I++ G C++G  DK +E+++ M + G      + N  +     
Sbjct: 170  FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCR 229

Query: 483  ---------LVDENRKRCL-PDLITYSTVINGLCRDGRLEEAKKKFIEM-LGRNL---YP 620
                     LV++ R+  L PD++T+++ I+ LC++G++ +A + F +M L   L    P
Sbjct: 230  EGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289

Query: 621  DSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLM 800
            +S  Y++ L   CK G +  A  + + +       +LQ+YN  + GL    +  E   ++
Sbjct: 290  NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVL 349

Query: 801  DEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRT 980
             +M ++G+ P++Y+YNI+++ LC+     +A  ++  M + G++P+  ++  L+  +C  
Sbjct: 350  KQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSV 409

Query: 981  GEFRPAKDVF-EIAISVYGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCY 1157
            G+   AK +  E+  +         +++ + L   G I EA++L     ++ + L++   
Sbjct: 410  GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTC 469

Query: 1158 KDLINRLCVEENFDYARDILKKM 1226
              +++ LC     D A +I+K M
Sbjct: 470  NIIVDGLCGSGELDKAIEIVKGM 492



 Score = 91.3 bits (225), Expect = 1e-15
 Identities = 56/247 (22%), Positives = 116/247 (46%), Gaps = 5/247 (2%)
 Frame = +3

Query: 513  PDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQV 692
            P +  Y+ ++    R+ R+E     + +M+   + P++  +++ +  LC    + +A ++
Sbjct: 110  PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAAREL 169

Query: 693  LKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCE 872
              +M  KGC     T+  L+ G        +   L++ M+  GV PN   YN +++S C 
Sbjct: 170  FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCR 229

Query: 873  GEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVF-EIAISVY----GH 1037
              +++++  L+++M + G+ P+I +F   I   C+ G+   A  +F ++ +  Y      
Sbjct: 230  EGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289

Query: 1038 EEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDIL 1217
              + Y+LM       G + +AK LFE+  +    ++   Y   +  L     F  A  +L
Sbjct: 290  NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVL 349

Query: 1218 KKMVQIG 1238
            K+M+  G
Sbjct: 350  KQMIDKG 356


>ref|XP_006409347.1| hypothetical protein EUTSA_v10022542mg [Eutrema salsugineum]
            gi|557110509|gb|ESQ50800.1| hypothetical protein
            EUTSA_v10022542mg [Eutrema salsugineum]
          Length = 877

 Score =  625 bits (1611), Expect = e-176
 Identities = 304/522 (58%), Positives = 384/522 (73%), Gaps = 2/522 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M D G  P+ YSYNIL+DGLCK GML+DA  +VGLM   GISPD  TY  LL GYC  
Sbjct: 353  KQMIDKGVWPSIYSYNILLDGLCKLGMLSDANTIVGLMKRNGISPDAVTYGCLLHGYCSV 412

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
             K   A  +L EM+R  CLPN YTCNILLHSLW+ G ++EAE L++KMNE+G G+D V+C
Sbjct: 413  GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRMSEAEDLLRKMNEKGYGIDTVTC 472

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDEN--RKRCLPDLITYST 536
            NI++DGLC SG LDKA+EIV  M  HGSAALGNLGN YIGLVD++     CLPDLITYST
Sbjct: 473  NIIVDGLCGSGDLDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 532

Query: 537  VINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKG 716
            ++NGLC+ GR  EAKK F EM+G  L PDS  Y+IF+++ CK+GKISSAF+VLKDME+KG
Sbjct: 533  LLNGLCKAGRFAEAKKLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 592

Query: 717  CNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAA 896
            C+K+L+TYN LI GLG  NQIFE+ GLMDEMKE+G+SPN+ TYN  +  LCEG K E+A 
Sbjct: 593  CHKSLETYNSLILGLGIQNQIFEIHGLMDEMKEKGISPNICTYNTAIKYLCEGGKVEDAT 652

Query: 897  FLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELL 1076
             LLDEM+Q+ I+PN++SF  LI  FC+  +F  A++ FE A+S+ G +E LYSLMFNELL
Sbjct: 653  NLLDEMMQKNISPNVFSFTYLIGAFCKVPDFDMAQEAFETAVSICGQKEGLYSLMFNELL 712

Query: 1077 AGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPA 1256
            A G++L+A +L E  LDR F+L +F YKDL+  LC ++  + A  IL KM+  G  FDPA
Sbjct: 713  AAGQLLKATELLETVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDKGYGFDPA 772

Query: 1257 LFMPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQT 1436
              MPVID LG  G K E N   E+M+ M+S  ++ NKV  + + L+  +  K GG++WQ 
Sbjct: 773  ALMPVIDGLGKMGNKTEANNFAEKMMEMASVGEVANKVDLNARDLHQTKDNKYGGNNWQN 832

Query: 1437 ILHRDDGSAIAMKTLKRVQKGWGQGNLSYFQAQRNDFLDDWD 1562
            ILHRDDGS IA+K+L RV+KGWGQG++S FQ  R D+LD W+
Sbjct: 833  ILHRDDGSGIALKSLTRVKKGWGQGDISSFQPPRVDYLDYWE 874



 Score =  182 bits (462), Expect = 5e-43
 Identities = 137/494 (27%), Positives = 217/494 (43%), Gaps = 60/494 (12%)
 Frame = +3

Query: 30   PNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRKRKKVEANKV 209
            P  Y++N+LI  LC +  +  AR +   M   G  P+  T+  L++GYCR     +  ++
Sbjct: 148  PETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNDFTFGILVRGYCRVGLPDKGLEL 207

Query: 210  LNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSCNIVIDGLCR 389
            LN M   G LPN    N ++ S  +EG   ++E L++KM E G   DIV+ N  I  LC+
Sbjct: 208  LNSMRSSGVLPNKVVYNTIISSFCKEGRNDDSEKLVEKMREEGLMPDIVTFNSRISALCK 267

Query: 390  SGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYSTVINGLCRDGRL 569
             GK+  A  I S+M            + Y+GL   NR       ITY+ ++ G C+ G L
Sbjct: 268  EGKVRDASRIFSDMEL----------DEYMGLPRPNR-------ITYNLMLKGFCKVGML 310

Query: 570  EEAKK----------------------------KFIE-------MLGRNLYPDSTVYDIF 644
            EEAK                             KFIE       M+ + ++P    Y+I 
Sbjct: 311  EEAKTLFESISENDDLSGLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGVWPSIYSYNIL 370

Query: 645  LYNLCKRGKISSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGV 824
            L  LCK G +S A  ++  M+R G +    TY CL+ G  S  ++     L+ EM     
Sbjct: 371  LDGLCKLGMLSDANTIVGLMKRNGISPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC 430

Query: 825  SPNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKD 1004
             PN YT NI+L+SL +  +  EA  LL +M ++G   +  +  +++   C +G+   A +
Sbjct: 431  LPNAYTCNILLHSLWKMGRMSEAEDLLRKMNEKGYGIDTVTCNIIVDGLCGSGDLDKAIE 490

Query: 1005 VFEIAISVYGH-------------------------EEVLYSLMFNELLAGGEILEAKQL 1109
            + +  + V+G                          + + YS + N L   G   EAK+L
Sbjct: 491  IVK-GMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKKL 549

Query: 1110 FEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPALFMPVIDYLGT 1289
            F   +      +S  Y   I+  C +     A  +LK M + GC      +  +I  LG 
Sbjct: 550  FAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 609

Query: 1290 RGKKHEVNELTERM 1331
            + +  E++ L + M
Sbjct: 610  QNQIFEIHGLMDEM 623



 Score =  167 bits (422), Expect = 2e-38
 Identities = 136/527 (25%), Positives = 231/527 (43%), Gaps = 79/527 (14%)
 Frame = +3

Query: 9    MADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRKRK 188
            M   G  PN   YN +I   CK G   D+ ++V  M   G+ PD+ T+++ +   C++ K
Sbjct: 211  MRSSGVLPNKVVYNTIISSFCKEGRNDDSEKLVEKMREEGLMPDIVTFNSRISALCKEGK 270

Query: 189  KVEANKVLNEM----IRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIV 356
              +A+++ ++M      G   PN  T N++L    + G + EA+ L + ++E  D   + 
Sbjct: 271  VRDASRIFSDMELDEYMGLPRPNRITYNLMLKGFCKVGMLEEAKTLFESISENDDLSGLQ 330

Query: 357  SCNIVIDGLCRSGKLDKAVEIVSEM-----W---------THGSAALGNL--GNLYIGLV 488
            S NI + GL R GK  +A  ++ +M     W           G   LG L   N  +GL+
Sbjct: 331  SYNIWLQGLVRHGKFIEAETVLKQMIDKGVWPSIYSYNILLDGLCKLGMLSDANTIVGLM 390

Query: 489  DENRKRCLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRG 668
               R    PD +TY  +++G C  G+++ AK    EM+  N  P++   +I L++L K G
Sbjct: 391  --KRNGISPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMG 448

Query: 669  KISSAFQVLKDMERKGCNKTLQTYNCLIFGL---GSTNQIFEM----------------- 788
            ++S A  +L+ M  KG      T N ++ GL   G  ++  E+                 
Sbjct: 449  RMSEAEDLLRKMNEKGYGIDTVTCNIIVDGLCGSGDLDKAIEIVKGMRVHGSAALGNLGN 508

Query: 789  --FGLMDE-MKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLL 959
               GL+D+ + E    P++ TY+ +LN LC+  +  EA  L  EM+   + P+  ++ + 
Sbjct: 509  SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKKLFAEMMGEKLQPDSVAYNIF 568

Query: 960  IKTFCRTGE----FRPAKD-------------------------VFEIAISVYGHEE--- 1043
            I  FC+ G+    FR  KD                         +FEI   +   +E   
Sbjct: 569  IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIQNQIFEIHGLMDEMKEKGI 628

Query: 1044 ----VLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARD 1211
                  Y+     L  GG++ +A  L +  + +    N F +  LI   C   +FD A++
Sbjct: 629  SPNICTYNTAIKYLCEGGKVEDATNLLDEMMQKNISPNVFSFTYLIGAFCKVPDFDMAQE 688

Query: 1212 ILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELTERMLAMSSEV 1352
              +  V I C     L+  + + L   G+  +  EL E +L    E+
Sbjct: 689  AFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLETVLDRGFEL 734



 Score =  137 bits (345), Expect = 2e-29
 Identities = 103/405 (25%), Positives = 185/405 (45%), Gaps = 6/405 (1%)
 Frame = +3

Query: 135  PDVATYSTLLQGYCRKRKKVE-ANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEM 311
            P +  Y+ LL+G C K ++VE  + +  +M      P TYT N+L+ +L     V  A  
Sbjct: 113  PGIYLYNVLLEG-CIKGRRVEFVSWLYKDMFLCRIAPETYTFNLLIRALCDSSCVDAARE 171

Query: 312  LMQKMNERGDGLDIVSCNIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVD 491
            L  +M E+G   +  +  I++ G CR G  DK +E+++ M + G                
Sbjct: 172  LFDEMPEKGCKPNDFTFGILVRGYCRVGLPDKGLELLNSMRSSG---------------- 215

Query: 492  ENRKRCLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGK 671
                  LP+ + Y+T+I+  C++GR ++++K   +M    L PD   ++  +  LCK GK
Sbjct: 216  -----VLPNKVVYNTIISSFCKEGRNDDSEKLVEKMREEGLMPDIVTFNSRISALCKEGK 270

Query: 672  ISSAFQVLKDM---ERKGCNKTLQ-TYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVY 839
            +  A ++  DM   E  G  +  + TYN ++ G      + E   L + + E      + 
Sbjct: 271  VRDASRIFSDMELDEYMGLPRPNRITYNLMLKGFCKVGMLEEAKTLFESISENDDLSGLQ 330

Query: 840  TYNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEI- 1016
            +YNI L  L    K  EA  +L +M+ +G+ P+IYS+ +L+   C+ G    A  +  + 
Sbjct: 331  SYNIWLQGLVRHGKFIEAETVLKQMIDKGVWPSIYSYNILLDGLCKLGMLSDANTIVGLM 390

Query: 1017 AISVYGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENF 1196
              +    + V Y  + +   + G++  AK L +  +      N++    L++ L      
Sbjct: 391  KRNGISPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRM 450

Query: 1197 DYARDILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELTERM 1331
              A D+L+KM + G   D      ++D L   G   +  E+ + M
Sbjct: 451  SEAEDLLRKMNEKGYGIDTVTCNIIVDGLCGSGDLDKAIEIVKGM 495



 Score = 90.9 bits (224), Expect = 2e-15
 Identities = 64/285 (22%), Positives = 132/285 (46%), Gaps = 8/285 (2%)
 Frame = +3

Query: 504  RCLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSA 683
            R  P+  T++ +I  LC    ++ A++ F EM  +   P+   + I +   C+ G     
Sbjct: 145  RIAPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNDFTFGILVRGYCRVGLPDKG 204

Query: 684  FQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNS 863
             ++L  M   G       YN +I       +  +   L+++M+E G+ P++ T+N  +++
Sbjct: 205  LELLNSMRSSGVLPNKVVYNTIISSFCKEGRNDDSEKLVEKMREEGLMPDIVTFNSRISA 264

Query: 864  LCEGEKSEEAAFLLDEM---LQRGI-TPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVY 1031
            LC+  K  +A+ +  +M      G+  PN  ++ L++K FC+ G    AK +FE   S+ 
Sbjct: 265  LCKEGKVRDASRIFSDMELDEYMGLPRPNRITYNLMLKGFCKVGMLEEAKTLFE---SIS 321

Query: 1032 GHEEV----LYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFD 1199
             ++++     Y++    L+  G+ +EA+ + +  +D+    + + Y  L++ LC      
Sbjct: 322  ENDDLSGLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGVWPSIYSYNILLDGLCKLGMLS 381

Query: 1200 YARDILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELTERML 1334
             A  I+  M + G   D   +  ++    + GK      L + M+
Sbjct: 382  DANTIVGLMKRNGISPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 426


>gb|EXC31542.1| hypothetical protein L484_006574 [Morus notabilis]
          Length = 864

 Score =  622 bits (1604), Expect = e-175
 Identities = 305/498 (61%), Positives = 385/498 (77%), Gaps = 2/498 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M D G  P+ ++YNI++DGLCKNGM +DAR V+GLMIS+GISPD  TY+TLL G+C K
Sbjct: 344  KEMVDKGTGPSIFTYNIMMDGLCKNGMFSDARMVMGLMISSGISPDTVTYTTLLHGHCNK 403

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
             +  EA KVL EM+   C PNT TCNILLHSLW+EG  +EAE L+QKM ERG G+DIV+C
Sbjct: 404  GRVFEAKKVLQEMMMNNCHPNTRTCNILLHSLWKEGKTSEAEELLQKMYERGYGIDIVTC 463

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENR--KRCLPDLITYST 536
            NIVIDGLC  GK+DKA+EIVSEMWTHGSAALG+LGN +IGLVD+N   + C PDLITYST
Sbjct: 464  NIVIDGLCNIGKMDKAIEIVSEMWTHGSAALGHLGNSFIGLVDDNNNGRNCRPDLITYST 523

Query: 537  VINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKG 716
            +I+ LC+ G+L+EAKKKF EM+G+ L PDS +YD F+ + CK+GKIS AF+VLKDME+KG
Sbjct: 524  IISALCKVGKLDEAKKKFAEMMGKRLCPDSVIYDTFIRSYCKQGKISLAFRVLKDMEKKG 583

Query: 717  CNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAA 896
            CNK+LQTYN LI G+GS NQIFE++GL+DEM+ERGVS +V TYN V++ LCE  + +EA 
Sbjct: 584  CNKSLQTYNSLILGVGSKNQIFEIYGLLDEMRERGVSADVCTYNNVISCLCEEGRIKEAT 643

Query: 897  FLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELL 1076
             LLDEM+Q+ I+PNI SF  LIK FC+  EF   ++VF IA+++ GH E LYSLMFNEL 
Sbjct: 644  SLLDEMVQKDISPNIGSFGKLIKAFCKACEFEDMQEVFAIALNICGHREALYSLMFNELF 703

Query: 1077 AGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPA 1256
            AGGE  +AK++F AALDR   + +F YKDLI++LC +E  D A  I+  M+  G  FDPA
Sbjct: 704  AGGEFSKAKEIFIAALDRNLYVGNFLYKDLIDKLCKDEKLDEASSIIYYMLGKGYGFDPA 763

Query: 1257 LFMPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQT 1436
             FMPVID LG +G KHE   L ERM+ MSSE +++NKV R +K+++  R  +   SDWQT
Sbjct: 764  SFMPVIDGLGKKGNKHEAELLAERMMEMSSEGRVKNKVYRHEKEMSQRRSRQTDKSDWQT 823

Query: 1437 ILHRDDGSAIAMKTLKRV 1490
            I+HRDDGS  A+KTLK++
Sbjct: 824  IVHRDDGSGTALKTLKKL 841



 Score =  162 bits (409), Expect = 7e-37
 Identities = 132/517 (25%), Positives = 218/517 (42%), Gaps = 61/517 (11%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M   G  P  Y++N+LI  LC++G L +AR +   M   G  P+  +   L++GYCR 
Sbjct: 131  KDMIVSGVVPETYTFNLLISALCESGHLENAREMFDKMSEKGCRPNEYSVGILVRGYCRA 190

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
                EA +  N+       PN    N L+ S  R G   EAE L+++M +     D+V+ 
Sbjct: 191  GLVDEALEFFNKT-SDVLPPNRIVYNTLISSFCRAGRTDEAEKLVERMRDNNMTPDVVTF 249

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYSTVI 542
            N  I  LC+SG++ +A  I  +M                  +D+      P++ITY+ ++
Sbjct: 250  NSRISALCKSGQVLEACRIFRDMQ-----------------IDQELGLPRPNIITYNLML 292

Query: 543  NGLCRDGRLEEAKKKF-----------------------------------IEMLGRNLY 617
             G C++G  EEA+  F                                    EM+ +   
Sbjct: 293  EGFCKEGMFEEARSLFETMKRNSEFVNLESFNIWLRALIMSGKLLEARLLLKEMVDKGTG 352

Query: 618  PDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGL 797
            P    Y+I +  LCK G  S A  V+  M   G +    TY  L+ G  +  ++FE   +
Sbjct: 353  PSIFTYNIMMDGLCKNGMFSDARMVMGLMISSGISPDTVTYTTLLHGHCNKGRVFEAKKV 412

Query: 798  MDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCR 977
            + EM      PN  T NI+L+SL +  K+ EA  LL +M +RG   +I +  ++I   C 
Sbjct: 413  LQEMMMNNCHPNTRTCNILLHSLWKEGKTSEAEELLQKMYERGYGIDIVTCNIVIDGLCN 472

Query: 978  TGEFRPA----KDVFEIAISVYGH--------------------EEVLYSLMFNELLAGG 1085
             G+   A     +++    +  GH                    + + YS + + L   G
Sbjct: 473  IGKMDKAIEIVSEMWTHGSAALGHLGNSFIGLVDDNNNGRNCRPDLITYSTIISALCKVG 532

Query: 1086 EILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPALFM 1265
            ++ EAK+ F   + +    +S  Y   I   C +     A  +LK M + GC      + 
Sbjct: 533  KLDEAKKKFAEMMGKRLCPDSVIYDTFIRSYCKQGKISLAFRVLKDMEKKGCNKSLQTYN 592

Query: 1266 PVIDYLGTRGKKHEVNELTERM--LAMSSEVQMENKV 1370
             +I  +G++ +  E+  L + M    +S++V   N V
Sbjct: 593  SLILGVGSKNQIFEIYGLLDEMRERGVSADVCTYNNV 629



 Score =  148 bits (374), Expect = 8e-33
 Identities = 107/399 (26%), Positives = 188/399 (47%), Gaps = 5/399 (1%)
 Frame = +3

Query: 150  YSTLLQGYCRKRKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMN 329
            Y++L +    ++     + +  +MI  G +P TYT N+L+ +L   G++  A  +  KM+
Sbjct: 110  YNSLFKSSLAEKSVDSFSWLYKDMIVSGVVPETYTFNLLISALCESGHLENAREMFDKMS 169

Query: 330  ERGDGLDIVSCNIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRC 509
            E+G   +  S  I++ G CR+G +D+A+E  ++     S  L                  
Sbjct: 170  EKGCRPNEYSVGILVRGYCRAGLVDEALEFFNKT----SDVLP----------------- 208

Query: 510  LPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQ 689
             P+ I Y+T+I+  CR GR +EA+K    M   N+ PD   ++  +  LCK G++  A +
Sbjct: 209  -PNRIVYNTLISSFCRAGRTDEAEKLVERMRDNNMTPDVVTFNSRISALCKSGQVLEACR 267

Query: 690  VLKDM---ERKGCNK-TLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVL 857
            + +DM   +  G  +  + TYN ++ G        E   L + MK      N+ ++NI L
Sbjct: 268  IFRDMQIDQELGLPRPNIITYNLMLEGFCKEGMFEEARSLFETMKRNSEFVNLESFNIWL 327

Query: 858  NSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISV-YG 1034
             +L    K  EA  LL EM+ +G  P+I+++ +++   C+ G F  A+ V  + IS    
Sbjct: 328  RALIMSGKLLEARLLLKEMVDKGTGPSIFTYNIMMDGLCKNGMFSDARMVMGLMISSGIS 387

Query: 1035 HEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDI 1214
             + V Y+ + +     G + EAK++ +  +      N+     L++ L  E     A ++
Sbjct: 388  PDTVTYTTLLHGHCNKGRVFEAKKVLQEMMMNNCHPNTRTCNILLHSLWKEGKTSEAEEL 447

Query: 1215 LKKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELTERM 1331
            L+KM + G   D      VID L   GK  +  E+   M
Sbjct: 448  LQKMYERGYGIDIVTCNIVIDGLCNIGKMDKAIEIVSEM 486



 Score = 72.4 bits (176), Expect = 7e-10
 Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 9/218 (4%)
 Frame = +3

Query: 738  YNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLDEML 917
            YN L     +   +     L  +M   GV P  YT+N+++++LCE    E A  + D+M 
Sbjct: 110  YNSLFKSSLAEKSVDSFSWLYKDMIVSGVVPETYTFNLLISALCESGHLENAREMFDKMS 169

Query: 918  QRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELLAGGEILE 1097
            ++G  PN YS  +L++ +CR G    A + F     V     ++Y+ + +     G   E
Sbjct: 170  EKGCRPNEYSVGILVRGYCRAGLVDEALEFFNKTSDVLPPNRIVYNTLISSFCRAGRTDE 229

Query: 1098 AKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPALFMP--- 1268
            A++L E   D     +   +   I+ LC       A  I + M     + D  L +P   
Sbjct: 230  AEKLVERMRDNNMTPDVVTFNSRISALCKSGQVLEACRIFRDM-----QIDQELGLPRPN 284

Query: 1269 ------VIDYLGTRGKKHEVNELTERMLAMSSEVQMEN 1364
                  +++     G   E   L E M   S  V +E+
Sbjct: 285  IITYNLMLEGFCKEGMFEEARSLFETMKRNSEFVNLES 322


>ref|XP_006296960.1| hypothetical protein CARUB_v10012952mg, partial [Capsella rubella]
            gi|482565669|gb|EOA29858.1| hypothetical protein
            CARUB_v10012952mg, partial [Capsella rubella]
          Length = 881

 Score =  622 bits (1603), Expect = e-175
 Identities = 297/522 (56%), Positives = 387/522 (74%), Gaps = 2/522 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M D G  P+ +SYNIL+DGLCK GML+DA+ + GLM   G+SPD  TY  LL GYC  
Sbjct: 357  KQMIDKGIGPSIFSYNILMDGLCKLGMLSDAKTIFGLMKQNGVSPDAVTYGCLLHGYCSV 416

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
             K   A ++L EM+R  CLPN YTCNILLHSLW+ G ++EAE L+++MNE+G GLD V+C
Sbjct: 417  GKVDAAKRLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRQMNEKGYGLDTVTC 476

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDEN--RKRCLPDLITYST 536
            NI+IDGLC SG+LDKA+EIV  M  HGSAALGNLGN YIGLVD++     CLPDLITYST
Sbjct: 477  NIIIDGLCESGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 536

Query: 537  VINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKG 716
            ++NGLC+ GR  EAK  F EM+G  L PDS  Y+IF+++ CK GK+SSAF+VLK+ME+KG
Sbjct: 537  LLNGLCKAGRFGEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKHGKLSSAFRVLKEMEKKG 596

Query: 717  CNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAA 896
            C+K+L+TYN LI GLG  NQIFE+ GLMDEMKE+G+ PN+ TYN  +  LCEG + E+A 
Sbjct: 597  CHKSLETYNALILGLGIKNQIFEIHGLMDEMKEKGILPNICTYNTAIKYLCEGGEVEDAT 656

Query: 897  FLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELL 1076
             LLDEM+Q+ + PN++SFK LI+ FC+  +F  A++VFE A S+ G +E LYSL+FNEL+
Sbjct: 657  NLLDEMMQKNVAPNVFSFKYLIEAFCKVPDFDMAQEVFETAASICGQKEALYSLIFNELV 716

Query: 1077 AGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPA 1256
            A  ++L+A ++ EA LDR F+L +F YKDLI  LC ++  + A +IL KM+  G  FDPA
Sbjct: 717  AARQLLKATEVLEAVLDRGFELGTFLYKDLIESLCKKDELEVASEILHKMIDKGYGFDPA 776

Query: 1257 LFMPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQT 1436
              MPVID LG  G K E N   E+M+ M+S  ++ NKV  + + L+  +  + GG++WQ 
Sbjct: 777  ALMPVIDGLGKMGNKKEANNFAEKMMEMASVGEVANKVDPNARDLHQKKHTRHGGNNWQN 836

Query: 1437 ILHRDDGSAIAMKTLKRVQKGWGQGNLSYFQAQRNDFLDDWD 1562
            ILHRDDGS IA+KTL RV+KGWGQG++S FQ QR+D+LD W+
Sbjct: 837  ILHRDDGSGIALKTLSRVKKGWGQGDISSFQPQRDDYLDYWE 878



 Score =  174 bits (440), Expect = 2e-40
 Identities = 130/456 (28%), Positives = 210/456 (46%), Gaps = 24/456 (5%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M   G  P  Y++N+LI  LC +  +  AR +   M   G  P+  T+  L++GYC+ 
Sbjct: 143  KDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILIRGYCKA 202

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSC 362
                +  ++LN M   G LPN    N ++ S  REG   E+E L++KM E G   DIV+ 
Sbjct: 203  GMSDKGLELLNSMESFGILPNKVVYNTIVSSFCREGRNDESEKLVEKMREEGLVPDIVTF 262

Query: 363  NIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYSTVI 542
            N  I  LC+ GK+  A  I  +M            + Y+GL         P+ ITY+ ++
Sbjct: 263  NSRISALCKEGKVLDASRIFRDMEL----------DEYLGLPR-------PNSITYNLML 305

Query: 543  NGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCN 722
             G C+ G LE+AK  F  +   +       Y+I+L  L + GK   A  VLK M  KG  
Sbjct: 306  KGFCKVGFLEDAKTLFDSIRENDELASLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIG 365

Query: 723  KTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFL 902
             ++ +YN L+ GL     + +   +   MK+ GVSP+  TY  +L+  C   K + A  L
Sbjct: 366  PSIFSYNILMDGLCKLGMLSDAKTIFGLMKQNGVSPDAVTYGCLLHGYCSVGKVDAAKRL 425

Query: 903  LDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVF-EIAISVYGHEEVLYSLMFNELLA 1079
            L EM++    PN Y+  +L+ +  + G    A+++  ++    YG + V  +++ + L  
Sbjct: 426  LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRQMNEKGYGLDTVTCNIIIDGLCE 485

Query: 1080 GGEILEAKQLFE-------AAL------------DRFFDLNS----FCYKDLINRLCVEE 1190
             GE+ +A ++ +       AAL            D   + N       Y  L+N LC   
Sbjct: 486  SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 545

Query: 1191 NFDYARDILKKMVQIGCKFDPALFMPVIDYLGTRGK 1298
             F  A+++  +M+    + D   +   I +    GK
Sbjct: 546  RFGEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKHGK 581



 Score =  147 bits (370), Expect = 2e-32
 Identities = 102/404 (25%), Positives = 189/404 (46%), Gaps = 5/404 (1%)
 Frame = +3

Query: 135  PDVATYSTLLQGYCRKRKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEML 314
            P +  Y+ LL+   R+R+    + +  +M+  G  P TYT N+L+ +L     V  A  L
Sbjct: 117  PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 176

Query: 315  MQKMNERGDGLDIVSCNIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDE 494
              +M E+G   +  +  I+I G C++G  DK +E+++ M + G                 
Sbjct: 177  FDEMPEKGCKPNEFTFGILIRGYCKAGMSDKGLELLNSMESFG----------------- 219

Query: 495  NRKRCLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKI 674
                 LP+ + Y+T+++  CR+GR +E++K   +M    L PD   ++  +  LCK GK+
Sbjct: 220  ----ILPNKVVYNTIVSSFCREGRNDESEKLVEKMREEGLVPDIVTFNSRISALCKEGKV 275

Query: 675  SSAFQVLKDMERKGC----NKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYT 842
              A ++ +DME             TYN ++ G      + +   L D ++E     ++ +
Sbjct: 276  LDASRIFRDMELDEYLGLPRPNSITYNLMLKGFCKVGFLEDAKTLFDSIRENDELASLQS 335

Query: 843  YNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEI-A 1019
            YNI L  L    K  EA  +L +M+ +GI P+I+S+ +L+   C+ G    AK +F +  
Sbjct: 336  YNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIFSYNILMDGLCKLGMLSDAKTIFGLMK 395

Query: 1020 ISVYGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFD 1199
             +    + V Y  + +   + G++  AK+L +  +      N++    L++ L       
Sbjct: 396  QNGVSPDAVTYGCLLHGYCSVGKVDAAKRLLQEMMRNNCLPNAYTCNILLHSLWKMGRIS 455

Query: 1200 YARDILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELTERM 1331
             A ++L++M + G   D      +ID L   G+  +  E+ + M
Sbjct: 456  EAEELLRQMNEKGYGLDTVTCNIIIDGLCESGELDKAIEIVKGM 499


>ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140-like
            isoform X1 [Glycine max]
          Length = 875

 Score =  620 bits (1599), Expect = e-175
 Identities = 302/520 (58%), Positives = 393/520 (75%), Gaps = 2/520 (0%)
 Frame = +3

Query: 9    MADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRKRK 188
            M   G +PNAY+YNI++DGLC+N ML+DAR ++ LM+  G+ PD   YSTLL GYC + K
Sbjct: 354  MVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGK 413

Query: 189  KVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGDGLDIVSCNI 368
              EA  VL+EMIR GC PNTYTCN LLHSLW+EG   EAE ++QKMNE+    D V+CNI
Sbjct: 414  VFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNI 473

Query: 369  VIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDE--NRKRCLPDLITYSTVI 542
            V++GLCR+G+LDKA EIVSEMWT+G  +L   GN +  L++   N   CLPD ITY+T+I
Sbjct: 474  VVNGLCRNGELDKASEIVSEMWTNGPTSLDK-GNSFASLINSIHNVSNCLPDGITYTTLI 532

Query: 543  NGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCN 722
            NGLC+ GRLEEAKKKFIEML +NL PDS  YD F+++ CK+GKISSAF+VLKDMER GC+
Sbjct: 533  NGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCS 592

Query: 723  KTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFL 902
            KTLQTYN LI GLGS NQIFE++GL DEMKE+G+SP++ TYN ++  LCEG K+++A  L
Sbjct: 593  KTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISL 652

Query: 903  LDEMLQRGITPNIYSFKLLIKTFCRTGEFRPAKDVFEIAISVYGHEEVLYSLMFNELLAG 1082
            L EML +GI+PN+ SFK+LIK F ++ +F+ A ++FE+A+++ G +E LYSLMFNELLAG
Sbjct: 653  LHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEALYSLMFNELLAG 712

Query: 1083 GEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYARDILKKMVQIGCKFDPALF 1262
            G++ EAK+LFE +LDR+  L +F YKDLI RLC +E    A  +L K++  G  FD A F
Sbjct: 713  GQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASF 772

Query: 1263 MPVIDYLGTRGKKHEVNELTERMLAMSSEVQMENKVQRDDKKLNHGRQYKDGGSDWQTIL 1442
            MPVID L  RG K + +EL +RM+ +  E +  ++   + K++  G+  KDGGSDWQ I+
Sbjct: 773  MPVIDGLSKRGNKRQADELAKRMMELELEDRPVDRTYSNRKRVIPGKLLKDGGSDWQDII 832

Query: 1443 HRDDGSAIAMKTLKRVQKGWGQGNLSYFQAQRNDFLDDWD 1562
            +RD GS IA+KTLKRVQKGWGQG++S  Q Q+NDFLD +D
Sbjct: 833  NRDAGSGIALKTLKRVQKGWGQGSISSLQPQQNDFLDYYD 872



 Score =  169 bits (428), Expect = 4e-39
 Identities = 127/461 (27%), Positives = 205/461 (44%), Gaps = 20/461 (4%)
 Frame = +3

Query: 9    MADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRKRK 188
            M   G  PN ++  IL+ GLC+ G++  A  +V    S  I+  V  Y+TL+  +CR+  
Sbjct: 176  MPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIANRVV-YNTLVSRFCREEM 234

Query: 189  KVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAEMLMQKMNERGD-GL---DIV 356
              EA +++  M   G LP+  T N  + +L R G V EA  + + M    + GL   ++V
Sbjct: 235  NNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVV 294

Query: 357  SCNIVIDGLCRSGKLDKAVEIVSEM--------------WTHGSAALGNLGNLYIGLVDE 494
            + N+++ G C+ G +  A  +V  M              W  G    G L    + L + 
Sbjct: 295  TFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEM 354

Query: 495  NRKRCLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKI 674
              K   P+  TY+ +++GLCR+  L +A+     M+   +YPD+  Y   L+  C RGK+
Sbjct: 355  VAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKV 414

Query: 675  SSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIV 854
              A  VL +M R GC     T N L+  L    +  E   ++ +M E+   P+  T NIV
Sbjct: 415  FEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIV 474

Query: 855  LNSLCEGEKSEEAAFLLDEMLQRGIT--PNIYSFKLLIKTFCRTGEFRPAKDVFEIAISV 1028
            +N LC   + ++A+ ++ EM   G T      SF  LI +        P           
Sbjct: 475  VNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLP----------- 523

Query: 1029 YGHEEVLYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYAR 1208
               + + Y+ + N L   G + EAK+ F   L +    +S  Y   I   C +     A 
Sbjct: 524  ---DGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAF 580

Query: 1209 DILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELTERM 1331
             +LK M + GC      +  +I  LG+  +  E+  L + M
Sbjct: 581  RVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEM 621



 Score =  158 bits (400), Expect = 7e-36
 Identities = 105/389 (26%), Positives = 195/389 (50%), Gaps = 23/389 (5%)
 Frame = +3

Query: 129  ISPDVATYSTLLQGYCRKRKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEAE 308
            +SP +  Y+ LL+   R  +    + + ++M+     P TYT N+L+HSL        A 
Sbjct: 111  LSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHAL 170

Query: 309  MLMQKMNERGDGLDIVSCNIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGN--------- 461
             L +KM ++G   +  +  I++ GLCR+G + +A+E+V+    + S  + N         
Sbjct: 171  QLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVN---NNNSCRIANRVVYNTLVS 227

Query: 462  ------LGNLYIGLVDE-NRKRCLPDLITYSTVINGLCRDGRLEEAKKKFIEM-----LG 605
                  + N    LV+  N    LPD++T+++ I+ LCR G++ EA + F +M     LG
Sbjct: 228  RFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELG 287

Query: 606  RNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDMERKGCNKTLQTYNCLIFGLGSTNQIFE 785
                P+   +++ L   CK G +  A  +++ M++ G   +L+ YN  + GL    ++ E
Sbjct: 288  LP-RPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLE 346

Query: 786  MFGLMDEMKERGVSPNVYTYNIVLNSLCEGEKSEEAAFLLDEMLQRGITPNIYSFKLLIK 965
               ++DEM  +G+ PN YTYNI+++ LC      +A  L+D M++ G+ P+  ++  L+ 
Sbjct: 347  ARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLH 406

Query: 966  TFCRTGEFRPAKDVFEIAISVYGHEEVLY--SLMFNELLAGGEILEAKQLFEAALDRFFD 1139
             +C  G+   AK V    I   G +   Y  + + + L   G  LEA+++ +   ++ + 
Sbjct: 407  GYCSRGKVFEAKSVLHEMIR-NGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQ 465

Query: 1140 LNSFCYKDLINRLCVEENFDYARDILKKM 1226
             ++     ++N LC     D A +I+ +M
Sbjct: 466  PDTVTCNIVVNGLCRNGELDKASEIVSEM 494



 Score =  100 bits (248), Expect = 3e-18
 Identities = 69/283 (24%), Positives = 134/283 (47%), Gaps = 6/283 (2%)
 Frame = +3

Query: 504  RCLPDLITYSTVINGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSA 683
            R  P   T++ +I+ LC     + A + F +M  +   P+     I +  LC+ G +  A
Sbjct: 145  RVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQA 204

Query: 684  FQVLKDMER-KGCNKTLQTYNCLIFGLGSTNQIFEMFGLMDEMKERGVSPNVYTYNIVLN 860
             +++ +    +  N+ +  YN L+          E   L++ M E GV P+V T+N  ++
Sbjct: 205  LELVNNNNSCRIANRVV--YNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRIS 262

Query: 861  SLCEGEKSEEAAFLLDEM---LQRGIT-PNIYSFKLLIKTFCRTGEFRPAKDVFEIAISV 1028
            +LC   K  EA+ +  +M    + G+  PN+ +F L++K FC+ G    A+ + E    V
Sbjct: 263  ALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKV 322

Query: 1029 YGHEEV-LYSLMFNELLAGGEILEAKQLFEAALDRFFDLNSFCYKDLINRLCVEENFDYA 1205
               + +  Y++    LL  GE+LEA+ + +  + +  + N++ Y  +++ LC       A
Sbjct: 323  GNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDA 382

Query: 1206 RDILKKMVQIGCKFDPALFMPVIDYLGTRGKKHEVNELTERML 1334
            R ++  M++ G   D   +  ++    +RGK  E   +   M+
Sbjct: 383  RGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMI 425



 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 1/235 (0%)
 Frame = +3

Query: 3    KGMADDGPQPNAYSYNILIDGLCKNGMLADARRVVGLMISAGISPDVATYSTLLQGYCRK 182
            K M  +G      +YN LI GL  N  + +   +   M   GISPD+ TY+ ++   C  
Sbjct: 584  KDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEG 643

Query: 183  RKKVEANKVLNEMIRGGCLPNTYTCNILLHSLWREGNVTEA-EMLMQKMNERGDGLDIVS 359
             K  +A  +L+EM+  G  PN  +  IL+ +  +  +   A E+    +N  G    + S
Sbjct: 644  GKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEALYS 703

Query: 360  CNIVIDGLCRSGKLDKAVEIVSEMWTHGSAALGNLGNLYIGLVDENRKRCLPDLITYSTV 539
              ++ + L   G+L +A E+                      V  +R   L + + Y  +
Sbjct: 704  --LMFNELLAGGQLSEAKELFE--------------------VSLDRYLTLKNFM-YKDL 740

Query: 540  INGLCRDGRLEEAKKKFIEMLGRNLYPDSTVYDIFLYNLCKRGKISSAFQVLKDM 704
            I  LC+D RL +A     +++ +    D   +   +  L KRG    A ++ K M
Sbjct: 741  IARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRM 795