BLASTX nr result

ID: Rehmannia22_contig00021634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00021634
         (539 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518108.1| DNA binding protein, putative [Ricinus commu...    65   1e-08
ref|XP_002300174.2| hypothetical protein POPTR_0001s32160g [Popu...    64   2e-08
ref|XP_006493805.1| PREDICTED: transcription factor FAMA-like is...    64   2e-08
ref|XP_006493804.1| PREDICTED: transcription factor FAMA-like is...    64   2e-08
ref|XP_002266835.1| PREDICTED: transcription factor FAMA [Vitis ...    64   3e-08
emb|CAN60177.1| hypothetical protein VITISV_027832 [Vitis vinifera]    64   3e-08
ref|XP_006420896.1| hypothetical protein CICLE_v10005031mg [Citr...    62   6e-08
emb|CBI17322.3| unnamed protein product [Vitis vinifera]               62   8e-08
gb|EOY05310.1| Basic helix-loop-helix DNA-binding superfamily pr...    60   3e-07

>ref|XP_002518108.1| DNA binding protein, putative [Ricinus communis]
           gi|223542704|gb|EEF44241.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 411

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 51/97 (52%), Positives = 59/97 (60%), Gaps = 12/97 (12%)
 Frame = -3

Query: 279 LDQYSLEGHNQPEP--IMKP----TSGDE---MVDYTLNNXXXXXPLISSNFGGSNML-- 133
           LD +    H+QP+   ++KP    TSGD    M+DY LNN      + SS F  SN L  
Sbjct: 21  LDHHHHHHHHQPQQHELIKPRIGETSGDSNSGMIDYMLNNPHQQL-ISSSGFCTSNSLDK 79

Query: 132 -SFADVMQFADFGPKLALINQAKTCENDQETGLIDPV 25
            SFADVMQFADFGPKLAL NQ K  E  +ETG IDPV
Sbjct: 80  LSFADVMQFADFGPKLAL-NQTKISE--EETG-IDPV 112


>ref|XP_002300174.2| hypothetical protein POPTR_0001s32160g [Populus trichocarpa]
           gi|550348686|gb|EEE84979.2| hypothetical protein
           POPTR_0001s32160g [Populus trichocarpa]
          Length = 409

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 50/97 (51%), Positives = 59/97 (60%), Gaps = 15/97 (15%)
 Frame = -3

Query: 270 YSLEGHNQPEP---IMKP----TSGDE-----MVDYTLNNXXXXXPLISSNFGGS---NM 136
           YSL+ H+Q +    +MK     TSGD+     M+DY LNN       +SS F  S   + 
Sbjct: 16  YSLDHHHQQQDHLGLMKQRIGGTSGDDDCNNGMIDYMLNNPQQHQQQMSSGFCTSTSFDK 75

Query: 135 LSFADVMQFADFGPKLALINQAKTCENDQETGLIDPV 25
           LSFADVMQFADFGPKLAL NQ K  E  +ETG IDPV
Sbjct: 76  LSFADVMQFADFGPKLAL-NQNKISE--EETG-IDPV 108


>ref|XP_006493805.1| PREDICTED: transcription factor FAMA-like isoform X2 [Citrus
           sinensis]
          Length = 424

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 50/106 (47%), Positives = 59/106 (55%), Gaps = 24/106 (22%)
 Frame = -3

Query: 270 YSLEGHN---QPEPIMKPTSGDE---------MVDYTLNNXXXXXPLI-------SSNFG 148
           YSL+ H+   Q E IMKP  GD          M+DY +NN     P I       SS F 
Sbjct: 16  YSLDHHHHHHQEELIMKPRIGDTSDDRNNNHGMIDYMINNNPQPRPQIQQQVSSSSSGFC 75

Query: 147 GSNM---LSFADVMQFADFGPKLALINQAKTCEN--DQETGLIDPV 25
            SN    LSFADVMQFA+FGPKL+ INQ     N  ++ETG+IDPV
Sbjct: 76  TSNSFDKLSFADVMQFAEFGPKLS-INQTNNRVNVPEEETGIIDPV 120


>ref|XP_006493804.1| PREDICTED: transcription factor FAMA-like isoform X1 [Citrus
           sinensis]
          Length = 427

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 50/106 (47%), Positives = 59/106 (55%), Gaps = 24/106 (22%)
 Frame = -3

Query: 270 YSLEGHN---QPEPIMKPTSGDE---------MVDYTLNNXXXXXPLI-------SSNFG 148
           YSL+ H+   Q E IMKP  GD          M+DY +NN     P I       SS F 
Sbjct: 19  YSLDHHHHHHQEELIMKPRIGDTSDDRNNNHGMIDYMINNNPQPRPQIQQQVSSSSSGFC 78

Query: 147 GSNM---LSFADVMQFADFGPKLALINQAKTCEN--DQETGLIDPV 25
            SN    LSFADVMQFA+FGPKL+ INQ     N  ++ETG+IDPV
Sbjct: 79  TSNSFDKLSFADVMQFAEFGPKLS-INQTNNRVNVPEEETGIIDPV 123


>ref|XP_002266835.1| PREDICTED: transcription factor FAMA [Vitis vinifera]
          Length = 400

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 9/91 (9%)
 Frame = -3

Query: 270 YSLEGHNQPEPIMKPTSGDE-------MVDYTLNNXXXXXPLISSNFGGSNM--LSFADV 118
           Y+L    Q E +MKP  G+        +VDY L+N      L SS F  S+   LSFADV
Sbjct: 23  YTLNQQQQQEQLMKPRIGESSDDNNHGVVDYMLSNPQHQQ-LTSSGFCSSSFDKLSFADV 81

Query: 117 MQFADFGPKLALINQAKTCENDQETGLIDPV 25
           MQFADFGPKLAL NQ K  E  +ETG IDPV
Sbjct: 82  MQFADFGPKLAL-NQTKVSE--EETG-IDPV 108


>emb|CAN60177.1| hypothetical protein VITISV_027832 [Vitis vinifera]
          Length = 422

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 9/91 (9%)
 Frame = -3

Query: 270 YSLEGHNQPEPIMKPTSGDE-------MVDYTLNNXXXXXPLISSNFGGSNM--LSFADV 118
           Y+L    Q E +MKP  G+        +VDY L+N      L SS F  S+   LSFADV
Sbjct: 23  YTLNQQQQQEQLMKPRIGESSDDNNHGVVDYMLSNPQHQQ-LTSSGFCSSSFDKLSFADV 81

Query: 117 MQFADFGPKLALINQAKTCENDQETGLIDPV 25
           MQFADFGPKLAL NQ K  E  +ETG IDPV
Sbjct: 82  MQFADFGPKLAL-NQTKVSE--EETG-IDPV 108


>ref|XP_006420896.1| hypothetical protein CICLE_v10005031mg [Citrus clementina]
           gi|557522769|gb|ESR34136.1| hypothetical protein
           CICLE_v10005031mg [Citrus clementina]
          Length = 424

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 49/106 (46%), Positives = 59/106 (55%), Gaps = 24/106 (22%)
 Frame = -3

Query: 270 YSLEGHN---QPEPIMKPTSGDE---------MVDYTLNNXXXXXPLI-------SSNFG 148
           YSL+ H+   Q E IMKP  G+          M+DY +NN     P I       SS F 
Sbjct: 16  YSLDHHHHQHQEELIMKPRIGETSDDRNNNHGMIDYMINNNPQPPPKIQQQVSSSSSGFC 75

Query: 147 GSNM---LSFADVMQFADFGPKLALINQAKTCEN--DQETGLIDPV 25
            SN    LSFADVMQFA+FGPKL+L NQ     N  ++ETG+IDPV
Sbjct: 76  TSNSFDKLSFADVMQFAEFGPKLSL-NQTNNRVNVPEEETGIIDPV 120


>emb|CBI17322.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 46/90 (51%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
 Frame = -3

Query: 270 YSLEGHNQPEPIMKPTSGDE-------MVDYTLNNXXXXXPLISSNFGGSNM--LSFADV 118
           Y+L    Q E +MKP  G+        +VDY L+N      L SS F  S+   LSFADV
Sbjct: 20  YTLNQQQQQEQLMKPRIGESSDDNNHGVVDYMLSNPQHQQ-LTSSGFCSSSFDKLSFADV 78

Query: 117 MQFADFGPKLALINQAKTCENDQETGLIDP 28
           MQFADFGPKLAL NQ K  E  +ETG IDP
Sbjct: 79  MQFADFGPKLAL-NQTKVSE--EETG-IDP 104


>gb|EOY05310.1| Basic helix-loop-helix DNA-binding superfamily protein [Theobroma
           cacao]
          Length = 413

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 44/87 (50%), Positives = 53/87 (60%), Gaps = 11/87 (12%)
 Frame = -3

Query: 255 HNQPEPIMKP----TSGDE--MVDYTLNNXXXXXPLISSNFGGS-----NMLSFADVMQF 109
           H+Q + + +P    TSGD   M+DY LNN      + SS F  S     + LSFADVMQF
Sbjct: 29  HHQDQLMKQPRIGETSGDNNGMIDYMLNNPQQQQQISSSGFCSSTPTSYDKLSFADVMQF 88

Query: 108 ADFGPKLALINQAKTCENDQETGLIDP 28
           ADFGPKLAL NQ +  E  +ETG IDP
Sbjct: 89  ADFGPKLAL-NQTRIPE--EETG-IDP 111


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