BLASTX nr result
ID: Rehmannia22_contig00021533
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia22_contig00021533 (1235 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera] 300 1e-78 emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 298 3e-78 emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 294 4e-77 emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 290 1e-75 gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 287 5e-75 gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 287 7e-75 emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 286 2e-74 emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 285 3e-74 gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 284 6e-74 gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 283 1e-73 pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 280 7e-73 gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 278 3e-72 gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subc... 278 3e-72 gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho... 278 3e-72 emb|CAN82380.1| hypothetical protein VITISV_021579 [Vitis vinifera] 276 1e-71 gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 276 1e-71 dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 276 1e-71 ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624... 276 1e-71 gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 276 1e-71 emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 276 1e-71 >emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera] Length = 2203 Score = 300 bits (767), Expect = 1e-78 Identities = 129/228 (56%), Positives = 171/228 (75%) Frame = +1 Query: 1 CKVSKLHQKHYASQPTKTSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPL 180 C + K Q + KT PF+LV SD+W P+H S +GYKYYI F+D ++ YTWI+P Sbjct: 481 CPLGKAKQFPLPTTINKTQVPFELVFSDVWEPAHTTSCDGYKYYIAFVDAFTNYTWIYPR 540 Query: 181 KAKSEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQ 360 + KS+A ++ LQF ALV+R++ T++KCLQTDWGGE+ L +L GI FRHPCPH HQQ Sbjct: 541 QQKSQATSIVLQFIALVDRKFPTKLKCLQTDWGGEFHPLQSLLQKKGILFRHPCPHVHQQ 600 Query: 361 NGRAERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQ 540 NG+ ERKH IVEIGL+ LA++QLP +WWHAFS+A +++N LPTPVLH +PY++L K Sbjct: 601 NGKVERKHRSIVEIGLTLLAKSQLPFTFWWHAFSTATYLLNRLPTPVLHCKTPYELLFKS 660 Query: 541 PPDYHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCL 684 PD+ FLK FGC CYP+LRPY +HK +Y+S++C F+GYS SHKGY C+ Sbjct: 661 SPDFLFLKTFGCACYPYLRPYKNHKLEYQSTQCTFIGYSLSHKGYLCV 708 Score = 131 bits (329), Expect = 7e-28 Identities = 74/212 (34%), Positives = 113/212 (53%), Gaps = 3/212 (1%) Frame = +1 Query: 52 TSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPLKAKSEAHNVFLQFNALV 231 TS P +L+H DL+GPS S+ G Y +DD+SRYTW+ L KSEA F +F V Sbjct: 1091 TSRPLELLHMDLFGPSRTPSLGGKSYAYVIVDDFSRYTWVLFLSQKSEAFYEFSKFCNKV 1150 Query: 232 ERQYHTQIKCLQTDWGGEYRSL--APILANLGIKFRHPCPHSHQQNGRAERKHLHIVEIG 405 + + I C+++D G E+ + GI P + QQNG ERK+ + E+ Sbjct: 1151 QNEKGFSITCIRSDHGREFENFDFEEYCNKHGINHNFSAPRTPQQNGVVERKNRTLQEMA 1210 Query: 406 LSFLAQAQLPLKYWWHAFSSAVFVIN-FLPTPVLHHFSPYQILLKQPPDYHFLKVFGCTC 582 + L + LP +W A +++ +V+N L P+L +PY++ + P+ + KVFGC C Sbjct: 1211 RTMLNENNLPKYFWAEAVNTSCYVLNRILLRPILKK-TPYELWKNKKPNISYFKVFGCKC 1269 Query: 583 YPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYK 678 + N KF +S +FLGYS S K ++ Sbjct: 1270 FILNTKDNLGKFDAKSDVGIFLGYSTSSKAFR 1301 >emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] Length = 1455 Score = 298 bits (763), Expect = 3e-78 Identities = 137/251 (54%), Positives = 176/251 (70%) Frame = +1 Query: 1 CKVSKLHQKHYASQPTKTSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPL 180 C + K+H+ ++ T + P +L+H DLWGP+ VLS GY+YYIHF+D +SR++WIF L Sbjct: 559 CCLGKIHRFPFSLSHTTYTKPLELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLL 618 Query: 181 KAKSEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQ 360 + KSEA F+ F VE Q+ +IK LQTDWGGE+R+ LA GI R CPH+ QQ Sbjct: 619 RNKSEAIKTFVNFKTQVELQFDLKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQ 678 Query: 361 NGRAERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQ 540 NG AERKH IVE GL+ L A LPLK+W +F + V++ N LPT +LHH P ++L K Sbjct: 679 NGVAERKHRTIVEHGLTLLHTASLPLKFWDESFRTVVYLSNRLPTAILHHKCPIEVLFKS 738 Query: 541 PPDYHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCLDSTGRIYIASTV 720 PDY FLKVFGC+C+P LRPYN+HK QYRS +C FLGYS HKGYKC+ S GR+YI+ V Sbjct: 739 IPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISHDV 798 Query: 721 EFNENEFPFSE 753 FNE FP+S+ Sbjct: 799 IFNETSFPYSK 809 Score = 63.9 bits (154), Expect = 1e-07 Identities = 34/73 (46%), Positives = 43/73 (58%) Frame = +1 Query: 1015 HPMVTRSKSGIFKPKTYSVTSLPPLILEPVSVAQALSIPQWKEAMQIEFDALIAKETWTL 1194 HPM+TR+KSGI KPK + I EP SV+ AL +WK+AM E+DAL TW+L Sbjct: 914 HPMITRAKSGIVKPKIFIAA-----IREPSSVSAALQQDEWKKAMVAEYDALQRNNTWSL 968 Query: 1195 VPFNSDMSVIDNK 1233 VP + I K Sbjct: 969 VPLPAGRQAIGCK 981 >emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] Length = 1424 Score = 294 bits (753), Expect = 4e-77 Identities = 137/252 (54%), Positives = 175/252 (69%) Frame = +1 Query: 1 CKVSKLHQKHYASQPTKTSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPL 180 C + K+H+ + + + P +L+H+DLWGP+ S G++YYIHFID YSR+TWI+ L Sbjct: 542 CCMGKIHKSSFLHSTSSYTKPLELIHTDLWGPASTPSSHGHQYYIHFIDAYSRFTWIYML 601 Query: 181 KAKSEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQ 360 K KSEA VFL F + VE Q +IK +Q+DWGGEYRS L + GI R CP++H+Q Sbjct: 602 KHKSEAFQVFLHFKSQVELQLGHKIKAVQSDWGGEYRSFTQYLTSNGIIHRISCPYTHEQ 661 Query: 361 NGRAERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQ 540 NG AERKH HIVE G++ LAQA LP KYW AF ++V++IN LPTPVL + SP ++L Q Sbjct: 662 NGLAERKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVLFHQ 721 Query: 541 PPDYHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCLDSTGRIYIASTV 720 P Y LKVFGC CYP LRP+N HK Q+RS C FLGYS +HKGYKCL G I I+ V Sbjct: 722 KPSYSXLKVFGCMCYPNLRPFNHHKLQFRSIPCTFLGYSLNHKGYKCLSPNGNILISRDV 781 Query: 721 EFNENEFPFSEL 756 F+E FPF++L Sbjct: 782 IFDEXAFPFAQL 793 Score = 63.9 bits (154), Expect = 1e-07 Identities = 33/73 (45%), Positives = 44/73 (60%) Frame = +1 Query: 1015 HPMVTRSKSGIFKPKTYSVTSLPPLILEPVSVAQALSIPQWKEAMQIEFDALIAKETWTL 1194 H M+TRSK GIFKPK Y +++ P SV +AL + WK+AM E+ AL+ TW L Sbjct: 861 HHMITRSKXGIFKPKAYLISTTP------TSVPEALQLSHWKQAMTDEYLALLRNNTWDL 914 Query: 1195 VPFNSDMSVIDNK 1233 VP +D +I K Sbjct: 915 VPPPTDRKLIGCK 927 >emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] Length = 1402 Score = 290 bits (741), Expect = 1e-75 Identities = 134/252 (53%), Positives = 177/252 (70%), Gaps = 1/252 (0%) Frame = +1 Query: 1 CKVSKLHQKHYASQPTKTSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPL 180 C+++K H+ S P +LV++D+WGP+ V S G KY+I F+DDYSRYTW++ L Sbjct: 520 CQLAKSHRLPTHLSSFHASKPLELVYTDIWGPASVTSTSGAKYFILFVDDYSRYTWLYLL 579 Query: 181 KAKSEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQ 360 ++K +A +F F VE Q+ +IKCLQ D GGE+RS L GI R CP++ Q Sbjct: 580 QSKDQALPIFKXFKLQVENQFEAKIKCLQXDNGGEFRSFMSFLQESGILHRFSCPYNSSQ 639 Query: 361 NGRAERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQ 540 NGR ERKH H+VE GL+ LA A LPLK+W +AF +A F+IN +P+ VL + SPY L K+ Sbjct: 640 NGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLINRMPSKVLXNASPYFALFKR 699 Query: 541 PPDYHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCLDS-TGRIYIAST 717 PDY FL+VFGC CYPF+RPYN+HK QYRS KCVFLGYS HKGY CLD+ TGR+Y++ Sbjct: 700 NPDYKFLRVFGCLCYPFIRPYNNHKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPH 759 Query: 718 VEFNENEFPFSE 753 V F+E +FPF++ Sbjct: 760 VVFDETQFPFAQ 771 >gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group] gi|108708884|gb|ABF96679.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1437 Score = 287 bits (735), Expect = 5e-75 Identities = 135/253 (53%), Positives = 179/253 (70%), Gaps = 1/253 (0%) Frame = +1 Query: 1 CKVSKLHQKHYASQPTKTSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPL 180 C+ +K HQ + +++ P +LV SD+WGP+ SV KYY+ FIDDYS++TWI+ L Sbjct: 492 CQKAKSHQLSFPKSTSESKYPLELVFSDVWGPAPQ-SVGNNKYYVSFIDDYSKFTWIYLL 550 Query: 181 KAKSEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQ 360 K KSE + F +F +LVER ++ +I +QTDWGGEY+ L +GI CPH+HQQ Sbjct: 551 KYKSEVFDKFHEFQSLVERLFNRKIVAMQTDWGGEYQKLHSFFNKVGITHHVSCPHTHQQ 610 Query: 361 NGRAERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQ 540 NG AERKH HIVE+GL+ LA + +PLK+W AF SAV++IN P+ VLH SP + LL Sbjct: 611 NGSAERKHRHIVEVGLALLAYSSMPLKFWGEAFLSAVYLINRTPSRVLHDVSPLERLLGH 670 Query: 541 PPDYHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCLD-STGRIYIAST 717 PDY+ L+VFGC C+P LRPYN HK Q+RS+ C FLGYS HKG+KCLD STGR+YI+ Sbjct: 671 KPDYNALRVFGCACWPNLRPYNKHKLQFRSTTCTFLGYSTLHKGFKCLDPSTGRVYISRD 730 Query: 718 VEFNENEFPFSEL 756 V F+E +FPF++L Sbjct: 731 VVFDETQFPFTKL 743 >gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1460 Score = 287 bits (734), Expect = 7e-75 Identities = 133/253 (52%), Positives = 181/253 (71%), Gaps = 1/253 (0%) Frame = +1 Query: 1 CKVSKLHQKHYASQPTKTSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPL 180 C+ +K HQ + + + P +LV SD+WGP+ SV KYY+ FIDD+S++TWI+ + Sbjct: 488 CQQAKSHQLPFPISSSVSKHPLELVFSDVWGPAPE-SVGRKKYYVSFIDDFSKFTWIYLI 546 Query: 181 KAKSEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQ 360 + KS+ + F +F +VERQ+ +I +QTDWGGEY+SL + +GI CPH+HQQ Sbjct: 547 QHKSQVFDKFQEFQVMVERQFDRKILAMQTDWGGEYQSLNSFFSKIGIVHHVSCPHTHQQ 606 Query: 361 NGRAERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQ 540 NG AERKH HIVEIGLS L+ A +PLK+W AF A ++IN +P+ V+H+ SP + L KQ Sbjct: 607 NGSAERKHRHIVEIGLSLLSHASMPLKFWDEAFQVATYLINRVPSRVIHNISPLEKLFKQ 666 Query: 541 PPDYHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCLD-STGRIYIAST 717 PDY L++FGC C+P LRPYN+HK Q+RS +CVFLG+S HKG+KCL+ STGRIYI+ Sbjct: 667 KPDYSSLRIFGCACWPNLRPYNNHKLQFRSKRCVFLGFSTMHKGFKCLEVSTGRIYISRD 726 Query: 718 VEFNENEFPFSEL 756 V F+EN FPF+EL Sbjct: 727 VVFDENIFPFTEL 739 >emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] Length = 1449 Score = 286 bits (731), Expect = 2e-74 Identities = 126/250 (50%), Positives = 185/250 (74%), Gaps = 1/250 (0%) Frame = +1 Query: 1 CKVSKLHQKHYASQPTKTSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPL 180 C+ +K H+ + ++ S P L+H+DLWGP + S G +Y+I F+DD+SR++WI+PL Sbjct: 556 CQFAKSHKLPFNVXVSRASHPLALLHADLWGPXSIPSTTGARYFILFVDDFSRFSWIYPL 615 Query: 181 KAKSEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQ 360 +K +A +VF++F +LVE Q++++I+CL++D GGE+++ + LA GIK + CP++ +Q Sbjct: 616 HSKDQALSVFIKFKSLVENQFNSRIQCLRSDNGGEFKAFSSYLATHGIKSQFSCPYTPEQ 675 Query: 361 NGRAERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQ 540 NGRAERK HI+E GL+ LA A LP K+W +AF +A+F+IN LPT VL++ SP+QIL + Sbjct: 676 NGRAERKLRHIIETGLALLATASLPFKFWLYAFHTAIFLINRLPTKVLNYQSPFQILFGK 735 Query: 541 PPDYHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCLDS-TGRIYIAST 717 P+YH K+FGC CYP++RPYN +K YRSS+CVFLGYS +HKGY CL+ TGR+Y+ Sbjct: 736 SPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSSNHKGYMCLNPLTGRLYVTRH 795 Query: 718 VEFNENEFPF 747 V F+E FPF Sbjct: 796 VVFHETVFPF 805 >emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] Length = 1365 Score = 285 bits (729), Expect = 3e-74 Identities = 131/233 (56%), Positives = 171/233 (73%), Gaps = 1/233 (0%) Frame = +1 Query: 58 SPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPLKAKSEAHNVFLQFNALVER 237 S +LV++D+WGP+ V S G KY+I F+DDYSRYTW++ L++K +A +F QF VE Sbjct: 489 SLLELVYTDIWGPASVTSTSGAKYFILFVDDYSRYTWLYLLQSKDQALPIFKQFKLQVEN 548 Query: 238 QYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQNGRAERKHLHIVEIGLSFL 417 Q+ +IKCLQ+D GGE+RS L GI R CP++ QNGR ERKH H+VE GL+ L Sbjct: 549 QFDAKIKCLQSDNGGEFRSFMSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALL 608 Query: 418 AQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQPPDYHFLKVFGCTCYPFLR 597 A A LPLK+W +AF +A F+IN +P+ VL + SPY L K+ PDY FL+VFGC CYPF+R Sbjct: 609 AHAGLPLKFWSYAFQTATFLINRMPSKVLQNASPYFALFKRNPDYKFLRVFGCLCYPFIR 668 Query: 598 PYNSHKFQYRSSKCVFLGYSDSHKGYKCLDS-TGRIYIASTVEFNENEFPFSE 753 PYN+HK QYRS KCVFLGYS HKGY CLD+ TGR+Y++ V F+E +FPF++ Sbjct: 669 PYNNHKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQFPFAQ 721 >gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1447 Score = 284 bits (726), Expect = 6e-74 Identities = 130/253 (51%), Positives = 177/253 (69%), Gaps = 1/253 (0%) Frame = +1 Query: 1 CKVSKLHQKHYASQPTKTSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPL 180 C+ K HQ Y+ + +S P +L++SD+WGP+ + SV G +YY+ FI DYS++TW++ + Sbjct: 494 CQQGKSHQLPYSRSSSMSSHPLELIYSDVWGPA-LTSVGGKQYYVSFIGDYSKFTWLYLI 552 Query: 181 KAKSEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQ 360 K KSE F +F ALVER ++ +I +Q+DWGGEY L +GI CPH+HQQ Sbjct: 553 KHKSEVIQKFHEFQALVERLFNRKIIAMQSDWGGEYEKLHSFFTKIGITHHVSCPHTHQQ 612 Query: 361 NGRAERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQ 540 NG AERKH HIVE+GL+ LA + +PLK+W AF +AV++IN PT +L +P + L Q Sbjct: 613 NGSAERKHRHIVEVGLTLLAYSSMPLKFWDEAFQAAVYLINRTPTKLLQFLTPLEHLFNQ 672 Query: 541 PPDYHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCLD-STGRIYIAST 717 PDY L+VFGC C+P LRPYN+HK Q+RS +C FLGYS HKG+KCLD STGR+YI+ Sbjct: 673 TPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCTFLGYSTLHKGFKCLDPSTGRVYISRD 732 Query: 718 VEFNENEFPFSEL 756 V F+E FPF++L Sbjct: 733 VIFDETNFPFAKL 745 >gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group] gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1431 Score = 283 bits (723), Expect = 1e-73 Identities = 131/253 (51%), Positives = 175/253 (69%), Gaps = 1/253 (0%) Frame = +1 Query: 1 CKVSKLHQKHYASQPTKTSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPL 180 C+ +K HQ + + +++P +L+HSD+WGP+ SV KYY+ FIDDYS++ WI+ L Sbjct: 481 CQQAKCHQLPFPRSTSVSNNPLELIHSDVWGPASE-SVGAKKYYVSFIDDYSKFVWIYFL 539 Query: 181 KAKSEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQ 360 K KSE F +F LVERQ+ +I +QTDWGGEY L +GI CPH+HQQ Sbjct: 540 KHKSEVFQKFHEFQKLVERQFDRKILSMQTDWGGEYLKLHTFFNEIGISHHVSCPHTHQQ 599 Query: 361 NGRAERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQ 540 NG ERKH HIVE+GLS LA A +PLK+W AF +A ++IN LP+ V+ +P + L KQ Sbjct: 600 NGAVERKHRHIVEVGLSLLAHASMPLKFWDEAFLAATYLINRLPSKVIKFDTPLERLFKQ 659 Query: 541 PPDYHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCLD-STGRIYIAST 717 PDY L+ FGC C+P LRPYN+HK Q+RS +CVFLG+S+ HKG+KCLD STGR+Y++ Sbjct: 660 TPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQCVFLGFSNIHKGFKCLDVSTGRVYVSRD 719 Query: 718 VEFNENEFPFSEL 756 V F+E FPF+ L Sbjct: 720 VTFDEQVFPFANL 732 >pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch gi|531389|gb|AAA57005.1| copia-like retrotransposon Hopscotch polyprotein [Zea mays] Length = 1439 Score = 280 bits (717), Expect = 7e-73 Identities = 131/253 (51%), Positives = 177/253 (69%), Gaps = 1/253 (0%) Frame = +1 Query: 1 CKVSKLHQKHYASQPTKTSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPL 180 C +K HQ Y +++S+P L+ SD++GP+ + S YKYY+ FIDDYS++TWI+ L Sbjct: 494 CLQAKAHQLPYTISMSQSSAPLMLIFSDVFGPA-IDSFGRYKYYVSFIDDYSKFTWIYLL 552 Query: 181 KAKSEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQ 360 + KS+ + F +F LVER + +I Q+DWGGEY L +GI + CPH+HQQ Sbjct: 553 RHKSDVYKSFCEFQHLVERMFGRKIIAFQSDWGGEYEKLNAHFKTIGIHHQVSCPHTHQQ 612 Query: 361 NGRAERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQ 540 NG AERKH HIVE+GL+ LAQ+ +PLKYW HAF +AV++IN P+ + H +P L Sbjct: 613 NGAAERKHRHIVEVGLALLAQSSMPLKYWDHAFLAAVYLINRTPSKTIAHDTPLHKLTGA 672 Query: 541 PPDYHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCLD-STGRIYIAST 717 PDY L++FGC C+P LRPYN HK Q+RS++CVFLGYS+ HKG+KCLD STGRIYI+ Sbjct: 673 TPDYSSLRIFGCACWPNLRPYNQHKLQFRSTRCVFLGYSNMHKGFKCLDISTGRIYISRD 732 Query: 718 VEFNENEFPFSEL 756 V F+E+ FPF+ L Sbjct: 733 VVFDEHVFPFASL 745 >gb|ACY72569.1| unknown [Oryza sativa Japonica Group] Length = 1436 Score = 278 bits (712), Expect = 3e-72 Identities = 131/253 (51%), Positives = 175/253 (69%), Gaps = 1/253 (0%) Frame = +1 Query: 1 CKVSKLHQKHYASQPTKTSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPL 180 C+ +K Q Y + + P +LV SD+WGP+ SV KYY+ FIDD+S++TWI+ L Sbjct: 494 CQEAKSRQLPYVRSTSVSQFPLELVFSDVWGPAPE-SVGRNKYYVSFIDDFSKFTWIYLL 552 Query: 181 KAKSEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQ 360 K KSE F +F ALVER + +I +QTDWGGEY+ L A +GI CPH+HQQ Sbjct: 553 KYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAKIGIDHHVSCPHTHQQ 612 Query: 361 NGRAERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQ 540 NG AERKH HI+E+GLS L+ A +PLK+W AF +A ++IN +P+ + + +P + L Q Sbjct: 613 NGSAERKHRHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRVPSKTIQNSTPLEKLFNQ 672 Query: 541 PPDYHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCLD-STGRIYIAST 717 PDY L+VFGC C+P LRPYN+HK Q+RS +CVFLG+S HKG+KCLD S+GR+YI+ Sbjct: 673 KPDYLSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRD 732 Query: 718 VEFNENEFPFSEL 756 V F+EN FPFS L Sbjct: 733 VVFDENIFPFSTL 745 >gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1016 Score = 278 bits (711), Expect = 3e-72 Identities = 132/250 (52%), Positives = 176/250 (70%), Gaps = 1/250 (0%) Frame = +1 Query: 10 SKLHQKHYASQPTKTSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPLKAK 189 +K HQ Y + +S P +LV SD+WGP+ V SVE KYY+ FIDD+S++TWI+ LK K Sbjct: 108 AKGHQLPYPKSSSVSSHPLELVFSDVWGPAPV-SVESRKYYVSFIDDFSKFTWIYLLKNK 166 Query: 190 SEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQNGR 369 SE + F +F VER ++ +I +QTDWGGEY L +GI CP++HQQNG Sbjct: 167 SEVFSKFHEFQQRVERLFNRKIISMQTDWGGEYEKLHSFFTKIGISHHVSCPYAHQQNGS 226 Query: 370 AERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQPPD 549 AERKH HIVE+GL+ LA A +PLK+W AF +A ++IN LP+ V+ + +P + LL Q P+ Sbjct: 227 AERKHRHIVEVGLALLAHASVPLKFWDEAFLAATYLINRLPSKVIQYSAPLERLLDQKPN 286 Query: 550 YHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCLD-STGRIYIASTVEF 726 Y L+ FGC C+P LRPYN K ++RS +CVFLGYS+ HKG+KCLD STGR+YI+ V F Sbjct: 287 YSALRTFGCACWPNLRPYNKRKLEFRSKQCVFLGYSNIHKGFKCLDVSTGRVYISRDVVF 346 Query: 727 NENEFPFSEL 756 +EN FPFS+L Sbjct: 347 DENVFPFSKL 356 >gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza sativa Japonica Group] gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol protein [Oryza sativa Japonica Group] Length = 1219 Score = 278 bits (711), Expect = 3e-72 Identities = 130/253 (51%), Positives = 177/253 (69%), Gaps = 1/253 (0%) Frame = +1 Query: 1 CKVSKLHQKHYASQPTKTSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPL 180 C+ K HQ + + +S+P +L+HSD+WGP+ SV +YY+ FIDDYS++ WI+ L Sbjct: 482 CQQGKSHQLPFPKFFSVSSNPLELIHSDVWGPASD-SVGAKRYYVSFIDDYSKFVWIYFL 540 Query: 181 KAKSEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQ 360 K KSE F +F ++VERQ++ +I +QTDWGGEY+ L +GI + CPH+HQQ Sbjct: 541 KFKSEVFEKFKEFQSMVERQFNRKILGMQTDWGGEYQKLNSFFKQIGIAHQVSCPHTHQQ 600 Query: 361 NGRAERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQ 540 NG ERKH HIVEIGLS LA A +PLK+W AF +A ++IN LP V+ +P L Q Sbjct: 601 NGAVERKHRHIVEIGLSLLAHASMPLKFWDEAFLAATYLINRLPRKVIDFDTPLARLFHQ 660 Query: 541 PPDYHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCLD-STGRIYIAST 717 PDY L+ FGC C+P LRPYN+HK Q+RS +CVFLG+S+ HKG+KCL+ +TG++YI+ Sbjct: 661 QPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQCVFLGFSNLHKGFKCLEVATGQVYISRD 720 Query: 718 VEFNENEFPFSEL 756 V F+E EFPFS+L Sbjct: 721 VTFDEQEFPFSKL 733 >emb|CAN82380.1| hypothetical protein VITISV_021579 [Vitis vinifera] Length = 828 Score = 276 bits (707), Expect = 1e-71 Identities = 128/254 (50%), Positives = 172/254 (67%), Gaps = 1/254 (0%) Frame = +1 Query: 1 CKVSKLHQKHYASQPTKTSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPL 180 C ++K H Y+ + S P L+H+DLWGP+ +S+ G +Y++ FIDDYSR+TWI+ L Sbjct: 419 CPLAKSHSLPYSLSSSHVSHPLALIHTDLWGPAPSISITGARYFLIFIDDYSRHTWIYFL 478 Query: 181 KAKSEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQ 360 K + + F+ F ++E Q HT IKC+Q+D GGE+ + P L GI + CPH+ QQ Sbjct: 479 STKDQVLHSFITFRKMIENQLHTTIKCIQSDNGGEFLAFKPYLEAHGILHQFSCPHTPQQ 538 Query: 361 NGRAERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQ 540 NGRAERK H+VE GL+ +AQ+ LP KYW +AF +AV++IN LP +LH SP Q L + Sbjct: 539 NGRAERKIRHLVETGLALMAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPIQALFHK 598 Query: 541 PPDYHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCLD-STGRIYIAST 717 P+YH L+VFGC C+P LRPY HK YRS+ CVFLGY+ +H GY CLD ST RIYI+ Sbjct: 599 LPNYHHLRVFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHNGYLCLDVSTSRIYISRN 658 Query: 718 VEFNENEFPFSELF 759 V F+E+ FPF F Sbjct: 659 VIFHESYFPFQSSF 672 >gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1210 Score = 276 bits (707), Expect = 1e-71 Identities = 130/253 (51%), Positives = 174/253 (68%), Gaps = 1/253 (0%) Frame = +1 Query: 1 CKVSKLHQKHYASQPTKTSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPL 180 C+ K HQ + + ++ P +LV SD+WGP+ SV G KYY+ FIDD+S++TWI+ L Sbjct: 485 CQKGKSHQLPFLKSTSASNFPLELVFSDVWGPAPD-SVGGRKYYVSFIDDFSKFTWIYLL 543 Query: 181 KAKSEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQ 360 K KSE + F +F LVER ++ +I +QTDWGGEY L +GI CPH+HQQ Sbjct: 544 KQKSEVFHKFHEFQQLVERIFYRKIIAMQTDWGGEYEKLHDFFTKIGISHHVSCPHTHQQ 603 Query: 361 NGRAERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQ 540 NG AERKH HIVE+GLS LA A +PLK+W AF +A ++IN P+ V+ + +P + L Q Sbjct: 604 NGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFIAATYLINRTPSKVIQYETPLEHLFHQ 663 Query: 541 PPDYHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCLD-STGRIYIAST 717 P Y L+VFGC C+P LRPYN+ K Q+RS +CVFLGYS+ HKG+KCLD + GR+YI+ Sbjct: 664 KPSYTSLRVFGCACWPNLRPYNARKLQFRSKQCVFLGYSNLHKGFKCLDVAAGRVYISRD 723 Query: 718 VEFNENEFPFSEL 756 V F+EN FPF+ L Sbjct: 724 VVFDENVFPFASL 736 >dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza sativa Japonica Group] Length = 1448 Score = 276 bits (706), Expect = 1e-71 Identities = 130/253 (51%), Positives = 174/253 (68%), Gaps = 1/253 (0%) Frame = +1 Query: 1 CKVSKLHQKHYASQPTKTSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPL 180 C+ +K HQ Y + + P +LV SD+WGP+ SV KYY+ FIDD+S++TWI+ L Sbjct: 497 CQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAPE-SVGRNKYYVSFIDDFSKFTWIYLL 555 Query: 181 KAKSEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQ 360 K KSE F +F ALVER + +I +QTDWGGEY+ L A +GI CPH+HQQ Sbjct: 556 KYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAQIGIDHHVSCPHTHQQ 615 Query: 361 NGRAERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQ 540 NG AERKH HI+E+GLS L+ A +PLK+W AF +A ++IN +P+ + + +P + L Q Sbjct: 616 NGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLFNQ 675 Query: 541 PPDYHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCLD-STGRIYIAST 717 PDY L+VF CTC+P L PYN+HK Q+RS +CVFLG+S HKG+K LD S+GR+YI+ Sbjct: 676 KPDYSSLRVFSCTCWPHLHPYNTHKLQFRSKQCVFLGFSTHHKGFKFLDVSSGRVYISRD 735 Query: 718 VEFNENEFPFSEL 756 V F+EN FPFS L Sbjct: 736 VVFDENVFPFSTL 748 >ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis] Length = 1682 Score = 276 bits (706), Expect = 1e-71 Identities = 119/196 (60%), Positives = 153/196 (78%) Frame = +1 Query: 160 YTWIFPLKAKSEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHP 339 +TWIFPL AKS+A VF +F + +E+ IK +QTDWGGE+R+ A L GI+FRHP Sbjct: 12 FTWIFPLTAKSDALQVFTEFKSFIEKHLQQHIKTVQTDWGGEFRTFASYLTQFGIQFRHP 71 Query: 340 CPHSHQQNGRAERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSP 519 CPH H QNGR ERKH HIV+IGL+ LAQA LPLK+WW+AF +AVF+IN LPTP L++ SP Sbjct: 72 CPHIHHQNGRIERKHRHIVDIGLTLLAQANLPLKFWWNAFHTAVFLINRLPTPTLNNISP 131 Query: 520 YQILLKQPPDYHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCLDSTGR 699 YQ L +Q PDY L+VFGC C+P+LRPYN HK +RS++CVF+GYS SHKGY+CL S+GR Sbjct: 132 YQKLFQQVPDYVSLRVFGCACFPYLRPYNRHKLSFRSNRCVFIGYSSSHKGYQCLHSSGR 191 Query: 700 IYIASTVEFNENEFPF 747 +Y+++ V F+E FP+ Sbjct: 192 VYVSNHVIFDEQSFPY 207 Score = 70.9 bits (172), Expect = 1e-09 Identities = 37/73 (50%), Positives = 50/73 (68%) Frame = +1 Query: 1015 HPMVTRSKSGIFKPKTYSVTSLPPLILEPVSVAQALSIPQWKEAMQIEFDALIAKETWTL 1194 HPM+TRSK+GIFKPK++ + +L + EP SV+ ALS P+W +AMQ EF AL TW L Sbjct: 297 HPMITRSKAGIFKPKSF-LAALLAIPSEPTSVSAALSDPKWFKAMQEEFQALQNNHTWDL 355 Query: 1195 VPFNSDMSVIDNK 1233 V + + V+ NK Sbjct: 356 VLPSEPIKVVGNK 368 >gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] Length = 1448 Score = 276 bits (706), Expect = 1e-71 Identities = 130/253 (51%), Positives = 174/253 (68%), Gaps = 1/253 (0%) Frame = +1 Query: 1 CKVSKLHQKHYASQPTKTSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPL 180 C+ +K HQ Y + + P +LV SD+WGP+ SV KYY+ FIDD+S++TWI+ L Sbjct: 497 CQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAPE-SVGRNKYYVSFIDDFSKFTWIYLL 555 Query: 181 KAKSEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQ 360 K KSE F +F ALVER + +I +QTDWGGEY+ L A +GI CPH+HQQ Sbjct: 556 KYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAQIGIDHHVSCPHTHQQ 615 Query: 361 NGRAERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQ 540 NG AERKH HI+E+GLS L+ A +PLK+W AF +A ++IN +P+ + + +P + L Q Sbjct: 616 NGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLFNQ 675 Query: 541 PPDYHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCLD-STGRIYIAST 717 PDY L+VF CTC+P L PYN+HK Q+RS +CVFLG+S HKG+K LD S+GR+YI+ Sbjct: 676 KPDYSSLRVFSCTCWPHLHPYNTHKLQFRSKQCVFLGFSTHHKGFKFLDVSSGRVYISRD 735 Query: 718 VEFNENEFPFSEL 756 V F+EN FPFS L Sbjct: 736 VVFDENVFPFSTL 748 >emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] Length = 1432 Score = 276 bits (706), Expect = 1e-71 Identities = 124/252 (49%), Positives = 174/252 (69%), Gaps = 1/252 (0%) Frame = +1 Query: 1 CKVSKLHQKHYASQPTKTSSPFQLVHSDLWGPSHVLSVEGYKYYIHFIDDYSRYTWIFPL 180 C+++K H+ S P +LV++D+WGP+ + S G +Y+I F+DDYSRYTW + L Sbjct: 525 CQLAKSHRLPTQLSNFHASKPLELVYTDIWGPASIKSTSGARYFILFVDDYSRYTWFYSL 584 Query: 181 KAKSEAHNVFLQFNALVERQYHTQIKCLQTDWGGEYRSLAPILANLGIKFRHPCPHSHQQ 360 + K +A +F F +E Q+ T+IKCLQ+D GGE+RS L +GI R CP++ Q Sbjct: 585 QTKDQALPIFKXFKLQMENQFDTKIKCLQSDNGGEFRSFTSFLQAVGIAHRFSCPYNSXQ 644 Query: 361 NGRAERKHLHIVEIGLSFLAQAQLPLKYWWHAFSSAVFVINFLPTPVLHHFSPYQILLKQ 540 NGR ERKH H+VE GL+ L+ A LP+KYW +AF + F+IN +P+ VL + SPY L ++ Sbjct: 645 NGRVERKHRHVVETGLALLSHASLPMKYWHYAFQTXTFLINRMPSKVLEYDSPYFTLFRR 704 Query: 541 PPDYHFLKVFGCTCYPFLRPYNSHKFQYRSSKCVFLGYSDSHKGYKCLD-STGRIYIAST 717 PDY +VFGC CYPF+RPYN+HK QYRS +C+FLGYS +HKG+ CLD +TGR+YI Sbjct: 705 HPDYKSFRVFGCLCYPFIRPYNTHKLQYRSVQCLFLGYSLNHKGFLCLDYATGRVYITPH 764 Query: 718 VEFNENEFPFSE 753 V F+E+ FP ++ Sbjct: 765 VVFDESTFPLAQ 776