BLASTX nr result
ID: Rehmannia22_contig00021019
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00021019
(1099 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS60243.1| hypothetical protein M569_14560, partial [Genlise... 118 4e-24
ref|XP_002308446.1| hypothetical protein POPTR_0006s22220g [Popu... 108 3e-21
emb|CBI30363.3| unnamed protein product [Vitis vinifera] 105 4e-20
emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera] 102 4e-19
ref|XP_006481552.1| PREDICTED: serine/arginine-rich splicing fac... 91 1e-15
ref|XP_006430105.1| hypothetical protein CICLE_v10011213mg [Citr... 90 1e-15
ref|XP_002530164.1| Splicing factor, arginine/serine-rich, putat... 83 2e-13
gb|EXC01941.1| Cold-inducible RNA-binding protein [Morus notabilis] 82 4e-13
ref|XP_006854723.1| hypothetical protein AMTR_s00030p00238130 [A... 82 4e-13
gb|EOY08416.1| Arginine/serine-rich zinc knuckle-containing prot... 76 2e-11
ref|XP_004305637.1| PREDICTED: uncharacterized protein LOC101293... 70 2e-09
ref|XP_006588853.1| PREDICTED: serine/arginine-rich splicing fac... 68 7e-09
gb|ESW17808.1| hypothetical protein PHAVU_007G270200g [Phaseolus... 64 1e-07
ref|XP_006575296.1| PREDICTED: serine/arginine-rich splicing fac... 59 4e-06
ref|XP_006575295.1| PREDICTED: serine/arginine-rich splicing fac... 59 4e-06
>gb|EPS60243.1| hypothetical protein M569_14560, partial [Genlisea aurea]
Length = 204
Score = 118 bits (296), Expect = 4e-24
Identities = 70/155 (45%), Positives = 88/155 (56%), Gaps = 13/155 (8%)
Frame = +3
Query: 3 TLRGTRICGEAITLSWSTRQPRALQRFGRGGKSYEPPRRRYPVKENADRRLGSNDRRDYE 182
TLRGT ICG ITLSWS +QP L+ GRGGK Y+PP RRY V +RR+ R+ Y
Sbjct: 52 TLRGTSICGHVITLSWSNQQPHGLKGVGRGGKLYDPPHRRYIVAN--ERRVAPYHRQGYG 109
Query: 183 MDTKKADGEVGKLASSDLVDDSTSYQPYDSNL-YVGERDRTSPND-----------LAGG 326
+K D E + SS+ V + DSN + ER+R+ N+ L G
Sbjct: 110 RGFRKTDDEFRRQISSNFVRTPAGHDQDDSNAPRLRERNRSRGNEDSAVKIVGADKLEDG 169
Query: 327 DRWGEQVVDP-SNEKYVENGPEFDRYEPYHSDGKK 428
DRW ++ D S E Y+E+G EFDRYEPY SDGKK
Sbjct: 170 DRWEDKAEDDLSIENYLESGIEFDRYEPYSSDGKK 204
>ref|XP_002308446.1| hypothetical protein POPTR_0006s22220g [Populus trichocarpa]
gi|222854422|gb|EEE91969.1| hypothetical protein
POPTR_0006s22220g [Populus trichocarpa]
Length = 693
Score = 108 bits (271), Expect = 3e-21
Identities = 67/183 (36%), Positives = 99/183 (54%), Gaps = 25/183 (13%)
Frame = +3
Query: 6 LRGTRICGEAITLSWSTRQPRALQRFGRGGKSYEPPRRRYPVK--ENADRRLGSNDRRDY 179
L ICG+ +TLSWS +QPR L+RF R +SYEP R + ++ R+LGSND++DY
Sbjct: 53 LHKRNICGKPLTLSWSNKQPRPLKRFARTDRSYEPQHRGNSDRGGDHVKRKLGSNDQQDY 112
Query: 180 EMDTKKADGEVGKLASSDL-----------VDDSTS--YQPYDSNLYVGERDRTSPNDLA 320
+ +AD +S+D+ ++D T+ +Q Y + ++ ER R P+ +
Sbjct: 113 RLSFTQADRNSRIPSSADMHQEEIVNHQDDIEDHTNKEHQGYRED-FLDERGRVGPDPM- 170
Query: 321 GGDRWGEQVVDPSNEKYVENGPEFDRYEPYHSDGKKELDEP----------SIRKCQEKI 470
DRWGEQ +P NE VENG EFDRY+PY ++ DE +++ QE
Sbjct: 171 DNDRWGEQFHNPPNEVGVENGVEFDRYDPYEGFDRRNNDENLQKAYSGGTLALQSSQENA 230
Query: 471 GSD 479
G D
Sbjct: 231 GGD 233
>emb|CBI30363.3| unnamed protein product [Vitis vinifera]
Length = 651
Score = 105 bits (261), Expect = 4e-20
Identities = 64/180 (35%), Positives = 96/180 (53%), Gaps = 21/180 (11%)
Frame = +3
Query: 6 LRGTRICGEAITLSWSTRQPRALQRFGRGGKSYEPPRRRYPVKENADRRLGSNDRRDYEM 185
+RG ICGE I+L+WS +QPR QR G +SYE R R ++R+LGS +R Y++
Sbjct: 53 MRGKNICGERISLTWSNKQPRGFQR---GARSYELQRGRI-----SNRKLGSKSQRGYKV 104
Query: 186 DTKKADGEVGKLASSDLVDDSTSYQPYDSNLYVGERDRTSPNDLA--GG---------DR 332
KK D + + + +++D+ SY + Y E + +L+ GG DR
Sbjct: 105 GVKKLDRDGYRSDAVEMLDEERSYNQDNIKDYGEENHHNAGENLSYEGGSIEPDAVDNDR 164
Query: 333 WGEQVVDPSNEKYVENGPEFDRYEPYHSDGKKELDE----------PSIRKCQEKIGSDK 482
WG+ V + SN +ENG EFDRYEPYH + + D+ P++R QEK G ++
Sbjct: 165 WGQHVGNLSNGNGLENGMEFDRYEPYHGEDRSNEDDNIQMTYSGGSPTLRSTQEKTGREQ 224
>emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera]
Length = 685
Score = 102 bits (253), Expect = 4e-19
Identities = 66/180 (36%), Positives = 94/180 (52%), Gaps = 21/180 (11%)
Frame = +3
Query: 6 LRGTRICGEAITLSWSTRQPRALQRFGRGGKSYEPPRRRYPVKENADRRLGSNDRRDYEM 185
+RG ICGE I+L+WS +QPR QR G +SYE R R ++R+LGS +R Y+
Sbjct: 53 MRGKNICGERISLTWSNKQPRGXQR---GARSYELQRGRX-----SNRKLGSKSQRGYKX 104
Query: 186 DTKKADGEVGKLASSDLVDDSTSYQPYDSNLYVGERDRTSPNDLA--GG---------DR 332
KK D + + + +++D+ SY + Y E + +L+ GG DR
Sbjct: 105 GVKKLDRDGYRSDAVEMLDEERSYNQDNIKDYGEENHHNAGENLSYEGGSIEPDAVDNDR 164
Query: 333 WGEQVVDPSNEKYVENGPEFDRYEPYH-SDGKKELD---------EPSIRKCQEKIGSDK 482
WG+ V + SN +ENG EFDRYEPYH D E D P++R QEK G ++
Sbjct: 165 WGQHVGNLSNGNGLENGMEFDRYEPYHGEDRSNEXDNIQMTYSGGSPTLRSTQEKTGREQ 224
>ref|XP_006481552.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform X1
[Citrus sinensis]
Length = 685
Score = 90.5 bits (223), Expect = 1e-15
Identities = 54/159 (33%), Positives = 78/159 (49%), Gaps = 16/159 (10%)
Frame = +3
Query: 3 TLRGTRICGEAITLSWSTRQPRALQRFGRGGKSYEP--PRRRYPVKENADRRLGSNDRRD 176
TL+G ICG+ +TL WS +QPR +RF + +SYEP R ++ DRRL SN R+
Sbjct: 52 TLQGRNICGQPLTLMWSNKQPRPYKRFSKAARSYEPLYGRSSNRREDYTDRRLHSNSRKY 111
Query: 177 YEMDTKKADGEVGKLASSDLVDDSTSYQPYDSNLYV--------------GERDRTSPND 314
Y+ ++ S+D++D TSY + Y+ G D+ P D
Sbjct: 112 YKFGR--------RVNSADMLDGDTSYHQDNIKDYIQEEHCEYREDLPDEGVNDKPKPVD 163
Query: 315 LAGGDRWGEQVVDPSNEKYVENGPEFDRYEPYHSDGKKE 431
DRW Q+ D N +ENG E DRYE Y +++
Sbjct: 164 ---NDRWAGQLQDQPNGNSIENGMELDRYESYRGSDRRD 199
>ref|XP_006430105.1| hypothetical protein CICLE_v10011213mg [Citrus clementina]
gi|557532162|gb|ESR43345.1| hypothetical protein
CICLE_v10011213mg [Citrus clementina]
Length = 685
Score = 90.1 bits (222), Expect = 1e-15
Identities = 61/180 (33%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Frame = +3
Query: 3 TLRGTRICGEAITLSWSTRQPRALQRFGRGGKSYEP--PRRRYPVKENADRRLGSNDRRD 176
TL+G ICG+ +TL WS +QPR +RF + +SYEP R ++ DRRL SN R+
Sbjct: 52 TLQGRDICGQPLTLMWSNKQPRPYKRFSKAARSYEPLYGRSSNRREDYTDRRLHSNSRKY 111
Query: 177 YEMDTKKADGEVGKLASSDLVDDSTSYQPYDSNLYV--------------GERDRTSPND 314
Y+ ++ S+D++D TSY + Y+ G D+ P D
Sbjct: 112 YKFGR--------RVNSADMLDGDTSYHQDNIKDYIQEEHCEYREDLPDEGVNDKPKPVD 163
Query: 315 LAGGDRWGEQVVDPSNEKYVENGPEFDRYEPYHSDGKKELDEPSIRKCQEKIGSDKEAST 494
DRW Q+ D N +ENG E DRYE Y G DE I GS + S+
Sbjct: 164 ---NDRWAGQLQDQPNGNSIENGMELDRYECYR--GSDRRDEHKIHHIAYSDGSHVQQSS 218
>ref|XP_002530164.1| Splicing factor, arginine/serine-rich, putative [Ricinus communis]
gi|223530325|gb|EEF32219.1| Splicing factor,
arginine/serine-rich, putative [Ricinus communis]
Length = 676
Score = 82.8 bits (203), Expect = 2e-13
Identities = 62/181 (34%), Positives = 87/181 (48%), Gaps = 23/181 (12%)
Frame = +3
Query: 6 LRGTRICGEAITLSWSTRQPRALQRFGR-GGKSYEPPRRRYPVKENADRRLGSNDRRDYE 182
L ICGEA+ L+WS +QPR R R GG+SYEP R VK +LGSN DY
Sbjct: 53 LEKKHICGEALNLTWSNKQPRQFNRLARAGGRSYEPQHSRDSVK----GKLGSN-VLDYR 107
Query: 183 MDTKKADGEVGKLASSDLVDDSTSYQPYDS------------NLYVGERDRTSPNDLAGG 326
K++DG + AS+++ D Y + ++GE R +D
Sbjct: 108 TSVKQSDGFSKRSASTNMRDKEVMYDKNRAKDNFGDEHSGYREEFLGEGGRFE-SDRVEN 166
Query: 327 DRWGEQVVDPSNEKYVENGPEFDRYEP------YHSDGKKEL----DEPSIRKCQEKIGS 476
DRWGEQ+ NE ++N F+RYEP + G +L P++R+ Q+ IG
Sbjct: 167 DRWGEQLHYQLNENGLKNDVVFERYEPCPDYERKYDSGVHQLAYRGGSPALRRPQKDIGR 226
Query: 477 D 479
D
Sbjct: 227 D 227
>gb|EXC01941.1| Cold-inducible RNA-binding protein [Morus notabilis]
Length = 667
Score = 82.0 bits (201), Expect = 4e-13
Identities = 56/160 (35%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Frame = +3
Query: 6 LRGTRICGEAITLSWSTRQPRALQRFGRGGKSYEPPRRRYPVKENADRRLGSND--RRDY 179
LRG I G +T+SWS +QPR QR R +SYE R ++ R SND RD+
Sbjct: 53 LRGRNIRGRQLTISWSNKQPRTFQRHARDARSYESHGR------DSSSRKNSNDWRERDF 106
Query: 180 EMDTKKADGEVGKLASSDLVDDSTSYQPYD--SNLYVGERDRTSPNDLAGGD-------- 329
++ + + G+L S D++D+ Y + N Y+GE R DL D
Sbjct: 107 RSGFEQPNNDGGRLNSEDMLDEGRDYHQENMIDNDYIGEEYRDLRRDLPRDDGDVGTKLV 166
Query: 330 ---RWGEQVVDPSNEKYVENGPEFDRYEPYHSDGKKELDE 440
RWGEQV D +K +G FD YEP +K+ DE
Sbjct: 167 DNGRWGEQVDDLFADK---DGMAFDHYEPDKGYDRKDRDE 203
>ref|XP_006854723.1| hypothetical protein AMTR_s00030p00238130 [Amborella trichopoda]
gi|548858409|gb|ERN16190.1| hypothetical protein
AMTR_s00030p00238130 [Amborella trichopoda]
Length = 706
Score = 82.0 bits (201), Expect = 4e-13
Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Frame = +3
Query: 3 TLRGTRICGEAITLSWSTRQPRALQRFGRGGKSYEPPR-RRYPVKENADRRLGSNDRR-- 173
+LR T+ICGE I+L+W+ ++ + L RF R + P R + KEN R GS D R
Sbjct: 52 SLRDTKICGEEISLTWANKKHQPLPRFMRNNRFSRPYRWSSFNRKENITRNRGSQDSRVL 111
Query: 174 --------DYEMDTKKADGEVGKLASSDLVDDSTSYQ-PYDSNLYVGERDRTSPNDLAGG 326
+YE + K+ + + K S L D +Q P + L + P +
Sbjct: 112 RTGSEHANNYEKEVKRVN-LLDKETESGLRDGREKFQSPIEEMLDIDGSVELKPLE---N 167
Query: 327 DRWGEQVVDPSNEKYVENGPEFDRYEPYHSDGKKE 431
DRWGE + DP N++ VE+G +FDR EPYH K+E
Sbjct: 168 DRWGESISDP-NDQQVEDGTQFDRCEPYHGFDKRE 201
>gb|EOY08416.1| Arginine/serine-rich zinc knuckle-containing protein 33, putative
isoform 1 [Theobroma cacao] gi|508716520|gb|EOY08417.1|
Arginine/serine-rich zinc knuckle-containing protein 33,
putative isoform 1 [Theobroma cacao]
Length = 674
Score = 76.3 bits (186), Expect = 2e-11
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Frame = +3
Query: 6 LRGTRICGEAITLSWSTRQPRALQRFGRGGKSY--EPPRRRYPV--KENADRRLGSNDRR 173
L+G ICGE +TL+WS +QPR L++F R +SY EP R R ++ +R+L N +
Sbjct: 53 LQGRNICGEPLTLTWSNKQPRPLKKFARADQSYDQEPLRVRSSARGRDYGNRKLDINVQH 112
Query: 174 DYEMDTKKADGEVGKLASSDLV-----DDSTSYQPYDSNLY----VGERDRTSPNDLAGG 326
DY+M ++ + +L S+DL+ D Y D++ Y + E + N L G
Sbjct: 113 DYKMSIEQPESHGVRLNSADLLNAEIGDQFKEYTREDNHDYGEDLLNEGGQVESN-LVDG 171
Query: 327 DRWGEQVVDPSNEKYVENGPEFDRYEPY 410
DRW + + S+ VE+ EFDRY Y
Sbjct: 172 DRWDGKRHELSDGNNVEHEMEFDRYIGY 199
>ref|XP_004305637.1| PREDICTED: uncharacterized protein LOC101293998 [Fragaria vesca
subsp. vesca]
Length = 619
Score = 69.7 bits (169), Expect = 2e-09
Identities = 49/139 (35%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Frame = +3
Query: 6 LRGTRICGEAITLSWSTRQPRALQRFGRGGKSYE-PPRRRYPVKENADRRLGSNDRRDYE 182
L+G ICGE + L+WS +QP Q R +SYE R ++ A RR+ SNDRRDY
Sbjct: 53 LQGRHICGEPLVLTWSKKQPIPFQGHQRVVRSYELQGRHSARGRDFAGRRMSSNDRRDYR 112
Query: 183 MDTKKADGEVGKLASSDLVDDSTSYQPYDSNLYVGERDRTSPNDLAGGDRWGEQVVDPSN 362
D K+ D + K S D+++ + + E LA G ++VD +N
Sbjct: 113 SDIKQPDTDGSKDNSVDMLNGRSGDPQKHAKDDNSEHHNFREGLLAAGHTDVAELVDTAN 172
Query: 363 EKYVENGPEFDRYEPYHSD 419
E G FDRYEP S+
Sbjct: 173 HTDHEVG--FDRYEPCRSN 189
>ref|XP_006588853.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform X1
[Glycine max] gi|571482098|ref|XP_006588854.1|
PREDICTED: serine/arginine-rich splicing factor 4-like
isoform X2 [Glycine max]
Length = 674
Score = 67.8 bits (164), Expect = 7e-09
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Frame = +3
Query: 6 LRGTRICGEAITLSWSTRQPRA-LQRFGRGGK--SYEPPRRRYPVKEN-ADRRLGSNDRR 173
L+G ICGE++TL+WS++QP + R G + +YE R + A RR+G+N R
Sbjct: 54 LKGRNICGESLTLTWSSKQPSSHFSRIPSGVRRNAYELGHARNAERVGYARRRMGTNGRS 113
Query: 174 DYEMDTKKADGEVGKLASSDLVDDSTSYQPYDSNLYVGERDRTS---PNDLAG------- 323
+ +M G+ S ++ + Y D YVGE+ PN+ G
Sbjct: 114 NQKM---------GRGKSVEMAGEERGYCRDDFKDYVGEKKNYEGDFPNEGGGVVPNKEE 164
Query: 324 GDRWGEQVVDPSNEKYVENGPEFDRYEPYHSDGKKELDE 440
WGE V DP + +G EFDRYEPY +K +E
Sbjct: 165 NGGWGEPVHDPLVDNGNGSGIEFDRYEPYQCPDRKHDNE 203
>gb|ESW17808.1| hypothetical protein PHAVU_007G270200g [Phaseolus vulgaris]
Length = 601
Score = 63.9 bits (154), Expect = 1e-07
Identities = 52/160 (32%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Frame = +3
Query: 6 LRGTRICGEAITLSWSTRQPRA-LQRFGRGGKSYEPPRRRYPVKENADRRLGSNDRRDYE 182
L+G ICGE +TL+WS +QP RF RGG + N + G R +
Sbjct: 54 LKGRNICGEELTLTWSNKQPNTHFSRFSRGG------------RRNGNEFRGKTGFRGW- 100
Query: 183 MDTKKADGEVGKLASSDLVDDSTSYQPYDSNLYVGERDRTSPN--DLAGG--------DR 332
++ ++G+ S D D+ Y+ YVGE + D GG DR
Sbjct: 101 -----SNQKIGRENSVDAPDEERGYRHDGFKDYVGEEKDYGGDFPDEGGGIISKTEENDR 155
Query: 333 WGEQVVDPSNEKYVENGP----EFDRYEPYHSDGKKELDE 440
WGE V D V+NG EFDRYEPY +K +E
Sbjct: 156 WGEPVHD-----LVDNGNGNAIEFDRYEPYQGHDRKYENE 190
>ref|XP_006575296.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform X2
[Glycine max]
Length = 642
Score = 58.5 bits (140), Expect = 4e-06
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Frame = +3
Query: 6 LRGTRICGEAITLSWSTRQPRA-LQRFGRGGKS--YEPPRRRYPVKEN-ADRRLGSNDRR 173
L+G ICGE +TL+WS +QP R GG+ YE R P + RR G +
Sbjct: 54 LKGRNICGEPLTLTWSNKQPSTHFSRIPSGGRRNVYELQHARNPERVGYVRRRSGFSGWS 113
Query: 174 DYEMDTKKADGEVGKLASSDLVDDSTSYQPYDSNLYVGERDRTSPN-DLAGGDRWGEQVV 350
+ +M G+ S ++ + Y+ D YVGE + + GG +
Sbjct: 114 NQKM---------GRGKSVEMPSEERGYRHDDFKDYVGEEKKFGGDFPYEGGGVVPNKED 164
Query: 351 DPSNEKYVENGP----EFDRYEPYHSDGKKELDE 440
+P ++ V+NG EFDRYEPY + +K +E
Sbjct: 165 EPVHDPLVDNGNGNAIEFDRYEPYQGNDRKHDNE 198
>ref|XP_006575295.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform X1
[Glycine max]
Length = 669
Score = 58.5 bits (140), Expect = 4e-06
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Frame = +3
Query: 6 LRGTRICGEAITLSWSTRQPRA-LQRFGRGGKS--YEPPRRRYPVKEN-ADRRLGSNDRR 173
L+G ICGE +TL+WS +QP R GG+ YE R P + RR G +
Sbjct: 54 LKGRNICGEPLTLTWSNKQPSTHFSRIPSGGRRNVYELQHARNPERVGYVRRRSGFSGWS 113
Query: 174 DYEMDTKKADGEVGKLASSDLVDDSTSYQPYDSNLYVGERDRTSPN-DLAGGDRWGEQVV 350
+ +M G+ S ++ + Y+ D YVGE + + GG +
Sbjct: 114 NQKM---------GRGKSVEMPSEERGYRHDDFKDYVGEEKKFGGDFPYEGGGVVPNKED 164
Query: 351 DPSNEKYVENGP----EFDRYEPYHSDGKKELDE 440
+P ++ V+NG EFDRYEPY + +K +E
Sbjct: 165 EPVHDPLVDNGNGNAIEFDRYEPYQGNDRKHDNE 198