BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00020869
         (1126 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   147   4e-42
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...   147   7e-41
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...   147   9e-41
gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea]       147   5e-40
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...   149   2e-38
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   137   6e-37
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...   137   2e-36
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]             159   3e-36
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]              159   3e-36
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   133   3e-36
gb|EEE63282.1| hypothetical protein OsJ_18092 [Oryza sativa Japo...   158   4e-36
gb|AAV43829.1| hypothetical protein [Oryza sativa Japonica Group...   158   4e-36
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ...   157   5e-36
ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S...   132   8e-36
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi...   156   2e-35
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...   134   3e-35
gb|EPS61587.1| hypothetical protein M569_13207, partial [Genlise...   129   1e-34
ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304...   122   4e-34
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta...   151   5e-34
gb|AAX95129.1| retrotransposon protein, putative, unclassified [...   131   2e-33

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score =  147 bits (370), Expect(2) = 4e-42
 Identities = 86/303 (28%), Positives = 159/303 (52%)
 Frame = -3

Query: 911 SVEPNGYRGGLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWVIFVYASTDASLRKE 732
           +VEP G  GGL + W  +V +  +   +  I+  L  +    +F++  +Y     + R E
Sbjct: 58  TVEPIGKSGGLALMWKDSVQIKVLQSDKRLIDALL--IWQDKEFYLTCIYGEPVQAERGE 115

Query: 731 QWVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILEMGDIAFR 552
            W  L +        W++ GDFN++    +K GG  R + S  +FR  ++   + ++   
Sbjct: 116 LWERLTRLGLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHS 175

Query: 551 GYPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLLLNVLAENG 372
           GY ++W  NR  DE ++ R+DR   +  W+  FP A  T++    SDHS L+ N++ +N 
Sbjct: 176 GYQFSWYGNR-NDELVQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPLINNLVGDNW 234

Query: 371 VGNKKRFAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMALTHWSKNNKTN 192
                 F ++K W++  G  +++   W++Q   T    + +KI  CR  ++ W + +K +
Sbjct: 235 -RKWAGFKYDKRWVQREGFKDLLCNFWSQQSTKTNAL-MMEKIASCRREISKWKRVSKPS 292

Query: 191 AAKAIELCKNKLNLLRQEGGHRNWKEWNVVKTALSKAYSEEEKFWGQKARISWLQEGDRN 12
           +A  I+  + KL+   ++    + +E   +K  LS+ Y+ EE+FW +K+RI W++ GDRN
Sbjct: 293 SAVRIQELQFKLDAATKQIPF-DRRELARLKKELSQEYNNEEQFWQEKSRIMWMRNGDRN 351

Query: 11  SKF 3
           +K+
Sbjct: 352 TKY 354



 Score = 52.8 bits (125), Expect(2) = 4e-42
 Identities = 19/46 (41%), Positives = 33/46 (71%)
 Frame = -2

Query: 1086 MKVCVWNCRGLGGPSTISQLKEVLRLHLPDLVFLCETKKKKIFHYN 949
            M++  WNC+G+G   T+  L+E+  L+ P+++FLCETKK++ +  N
Sbjct: 1    MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLEN 46


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score =  147 bits (370), Expect(2) = 7e-41
 Identities = 93/307 (30%), Positives = 154/307 (50%), Gaps = 4/307 (1%)
 Frame = -3

Query: 911 SVEPNGYRGGLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWVIF-VYASTDASLRK 735
           +VEP G  GGL +FW +++ +  ++  +  +++++    S  K W I  VY      +R 
Sbjct: 57  TVEPEGRSGGLAIFWKSHLEIEFLYADKNLMDLQVS---SRNKVWFISCVYGLPVTHMRP 113

Query: 734 EQWVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILEMGDIAF 555
           + W  L     K  + W + GDFNDI SN++K GG  RS  S   F   +    M ++  
Sbjct: 114 KLWEHLNSIGLKRAEAWCLIGDFNDIRSNDEKLGGPRRSPSSFQCFEHMLLNCSMHELGS 173

Query: 554 RGYPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLLLNVLAEN 375
            G  +TW  NR  D++++ ++DR FG+P W   FP+A    +    SDH  +L+    +N
Sbjct: 174 TGNSFTWGGNR-NDQWVQCKLDRCFGNPAWFSIFPNAHQWFLEKFGSDHRPVLVKFTNDN 232

Query: 374 GVGNKKRFAFNKNWLESPGIDNVVEVAWNKQV-RGT--PMFQIQQKIKYCRMALTHWSKN 204
            +  + +F ++K   + P    V+  +WN  + +GT    F + +    CR A++ W  +
Sbjct: 233 EL-FRGQFRYDKRLDDDPYCIEVIHRSWNSAMSQGTHSSFFSLIE----CRRAISVWKHS 287

Query: 203 NKTNAAKAIELCKNKLNLLRQEGGHRNWKEWNVVKTALSKAYSEEEKFWGQKARISWLQE 24
           + TNA   I+  +  L+   +      W     +K  LS AY +EE FW QK+R  WL  
Sbjct: 288 SDTNAQSRIKRLRKDLD-AEKSIQIPCWPRIEYIKDQLSLAYGDEELFWRQKSRQKWLAG 346

Query: 23  GDRNSKF 3
           GD+N+ F
Sbjct: 347 GDKNTGF 353



 Score = 48.5 bits (114), Expect(2) = 7e-41
 Identities = 22/43 (51%), Positives = 28/43 (65%)
 Frame = -2

Query: 1080 VCVWNCRGLGGPSTISQLKEVLRLHLPDLVFLCETKKKKIFHY 952
            V  WNC+GL  P TI  LKE+ + H PD++FL ETK  + F Y
Sbjct: 2    VISWNCQGLRNPWTIRYLKEMKKDHFPDILFLMETKNSQDFVY 44


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score =  147 bits (370), Expect(2) = 9e-41
 Identities = 91/314 (28%), Positives = 161/314 (51%), Gaps = 2/314 (0%)
 Frame = -3

Query: 938  KLKLDDRWISVEPNGYRGGLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWVIFVYA 759
            K+  +D  I + P G  GGL+V+W  ++S+  +      +++ +E       F++  +Y 
Sbjct: 412  KMGFEDMCI-ISPRGLSGGLVVYWKKHLSIQVISHDVRLVDLYVEYKNF--NFYLSCIYG 468

Query: 758  STDASLRKEQWVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHI 579
                S R   W  L++  +     W+M GDFN+I +  +KKGGR RS  SL +F + I+ 
Sbjct: 469  HPIPSERHHLWEKLQRVSAHRSGPWMMCGDFNEILNLNEKKGGRRRSIGSLQNFTNMINC 528

Query: 578  LEMGDIAFRGYPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLL 399
              M D+  +G PY+W   R+ +E IE  +DRVF + DW   FP      + ++ SDH+ +
Sbjct: 529  CNMKDLKSKGNPYSWVGKRQ-NETIESCLDRVFINSDWQASFPAFETEFLPIAGSDHAPV 587

Query: 398  LLNVLAENGVGNKKRFAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMALT 219
            ++++ AE     + +F +++   +     + V+  WN+  R        +K+  CR  L 
Sbjct: 588  IIDI-AEEVCTKRGQFRYDRRHFQFEDFVDSVQRGWNRG-RSDSHGGYYEKLHCCRQELA 645

Query: 218  HWSKNNKTNAAKAIELCKNKLNLLRQEG--GHRNWKEWNVVKTALSKAYSEEEKFWGQKA 45
             W +  KTN A+ IE  K +++   ++    H+       ++  L++AY +EE +W  K+
Sbjct: 646  KWKRRTKTNTAEKIETLKYRVDAAERDHTLPHQTILR---LRQDLNQAYRDEELYWHLKS 702

Query: 44   RISWLQEGDRNSKF 3
            R  W+  GDRN+ F
Sbjct: 703  RNRWMLLGDRNTMF 716



 Score = 48.1 bits (113), Expect(2) = 9e-41
 Identities = 20/40 (50%), Positives = 31/40 (77%)
 Frame = -2

Query: 1086 MKVCVWNCRGLGGPSTISQLKEVLRLHLPDLVFLCETKKK 967
            M+V  WNC+GLG P T+ +L+EV R++  D++FL ETK++
Sbjct: 363  MRVGFWNCQGLGQPLTVRRLEEVQRVYFLDMLFLIETKQQ 402


>gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea]
          Length = 1469

 Score =  147 bits (371), Expect(2) = 5e-40
 Identities = 87/309 (28%), Positives = 152/309 (49%), Gaps = 5/309 (1%)
 Frame = -3

Query: 914  ISVEPNGYRGGLLVFWSANVSVCQV-FCSQFCIEVELEMLGSVGKFWVIFVYASTDASLR 738
            ++V   G  GGL +FW  +V V  + FCS + I+V + +  ++ ++     Y +    LR
Sbjct: 424  VAVSATGLSGGLALFWRKDVCVSLLSFCSSY-IDVLVRLTPTLPEWRFTGFYGNPAVQLR 482

Query: 737  KEQWVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILEMGDIA 558
               W  L Q +      W++ GDFN++    + +   +R    +  FRD +   ++ DI 
Sbjct: 483  PRSWDLLRQIRHHSICPWLVAGDFNEVVMQNEVESLNSRPASQMRAFRDALLDCQLQDIG 542

Query: 557  FRGYPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDH--SLLLLNVL 384
            F G+P+TW N R+  + +  R+DR   +  W   FP A+V H+   SSDH   L+ L+  
Sbjct: 543  FTGFPFTWCNKRKAPDTVRARLDRAVATTTWNNLFPRAIVKHLPYGSSDHLPLLIFLDPA 602

Query: 383  AENGV-GNKKRFAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMALTHWSK 207
            A   +  NK+RF F   W   PG  +V+  +W    + T       +I+  RM+L  W +
Sbjct: 603  APTSIRPNKRRFKFEAFWTTIPGCADVIHQSWAPNSQPT---NFNYRIQKTRMSLLKWYQ 659

Query: 206  NNKTNAAKAIELCKNKLNLLRQEGGHRNWKEW-NVVKTALSKAYSEEEKFWGQKARISWL 30
            +        ++    +L+LL ++    + K   + +K   +  + +EE +W Q+ +I WL
Sbjct: 660  SKVGPIKSRLQKIATELDLLARQSITDDIKHCESALKEEQASLWKQEEMYWKQRGKIHWL 719

Query: 29   QEGDRNSKF 3
            + GDRN+ F
Sbjct: 720  RCGDRNTAF 728



 Score = 45.4 bits (106), Expect(2) = 5e-40
 Identities = 20/46 (43%), Positives = 30/46 (65%)
 Frame = -2

Query: 1110 PKLGPNLSMKVCVWNCRGLGGPSTISQLKEVLRLHLPDLVFLCETK 973
            PK  P+ +M +  WNCRGL   ST+ +L++V+    P ++FL ETK
Sbjct: 362  PKAPPS-AMSLLAWNCRGLRSASTVRRLRDVISSDAPSMIFLSETK 406


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
           Arabidopsis thaliana retrotransposon Ta11-1
           gi|976278|gb|AAA75254.1| reverse transcriptase
           [Arabidopsis thaliana]
          Length = 1333

 Score =  149 bits (377), Expect(2) = 2e-38
 Identities = 92/307 (29%), Positives = 149/307 (48%)
 Frame = -3

Query: 923 DRWISVEPNGYRGGLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWVIFVYASTDAS 744
           +R  +V P G  GGL +FW   V +   +  +  I+ +++  GS  +F+V  VY +   S
Sbjct: 56  ERVFTVNPIGLSGGLALFWKKGVDIVIKYADKNLIDFQIQF-GS-HEFYVSCVYGNPAFS 113

Query: 743 LRKEQWVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILEMGD 564
            +   W  + +      + W M GDFN I  N +K+GG  R   S   F D +   +M +
Sbjct: 114 DKHLVWEKITRIGINRKEPWCMLGDFNPILHNGEKRGGPRRGDSSFLPFTDMLDSCDMLE 173

Query: 563 IAFRGYPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLLLNVL 384
           +   G P+TW   +  + +I+ R+DR FG+ +W   FP +    +    SDH  +L+  L
Sbjct: 174 LPSIGNPFTW-GGKTNEMWIQSRLDRCFGNKNWFRFFPISNQEFLDKRGSDHRPVLVR-L 231

Query: 383 AENGVGNKKRFAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMALTHWSKN 204
            +     +  F F+K     P +   +  AWN   R   +  +  K+K+CR AL+ W K 
Sbjct: 232 TKTKEEYRGNFRFDKRLFNQPNVKETIVQAWNGSQRNENLL-VLDKLKHCRSALSRWKKE 290

Query: 203 NKTNAAKAIELCKNKLNLLRQEGGHRNWKEWNVVKTALSKAYSEEEKFWGQKARISWLQE 24
           N  N++  I   +  L L +  G  R    ++ +K  L KA  +EE FW QK+R  W+  
Sbjct: 291 NNINSSTRITQARAALELEQSSGFPRADLVFS-LKNDLCKANHDEEVFWSQKSRAKWMHS 349

Query: 23  GDRNSKF 3
           GD+N+ F
Sbjct: 350 GDKNTSF 356



 Score = 37.4 bits (85), Expect(2) = 2e-38
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = -2

Query: 1086 MKVCVWNCRGLGGPS--TISQLKEVLRLHLPDLVFLCETK 973
            M +  WNC+GLG     TI +L E+   H P+++FL ETK
Sbjct: 1    MSLVSWNCQGLGWSQDLTIPRLMEMRLSHFPEVLFLMETK 40


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  137 bits (344), Expect(2) = 6e-37
 Identities = 87/303 (28%), Positives = 140/303 (46%), Gaps = 7/303 (2%)
 Frame = -3

Query: 890 RGGLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWVIFVYASTDASLRKEQWVFLEQ 711
           RGGL + W + + V  +  S   I++ +      G++    +Y   +   + +    L  
Sbjct: 70  RGGLAMLWRSEIKVQVMSMSSNHIDIVVGEEAQ-GEWRFTGIYGYPEEEHKDKTGALLSA 128

Query: 710 AKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILEMGDIAFRGYPYTWS 531
                 + W+ GGDFN +    +KKGG   +      FR+ +      D+ F GY +TW+
Sbjct: 129 LARASRRPWLCGGDFNLMLVASEKKGGDGFNSREADIFRNAMEECHFMDLGFVGYEFTWT 188

Query: 530 NNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLLLNVLAENGVGNK--- 360
           NNR GD  I+ER+DR   +  W +KFP + V+H+    SDH  ++ +V        +   
Sbjct: 189 NNRGGDANIQERLDRFVANDLWKIKFPGSFVSHLPKRKSDHVPIVASVKGAQSAATRTKK 248

Query: 359 -KRFAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMA--LTHWSKNNKTNA 189
            KRF F   WL     D VV+  W   +RGT        I   R A  L  WSK    + 
Sbjct: 249 SKRFRFEAMWLREGESDEVVKETW---MRGT-----DAGINLARTANKLLSWSKQKFGHV 300

Query: 188 AKAIELCKNKLN-LLRQEGGHRNWKEWNVVKTALSKAYSEEEKFWGQKARISWLQEGDRN 12
           AK I +C++++  L+  E    N      +   + +    EE +W Q++R  W++ GD+N
Sbjct: 301 AKEIRMCQHQMKVLMESEPSEDNIMHMRALDARMDELEKREEVYWHQRSRQDWIKSGDKN 360

Query: 11  SKF 3
           +KF
Sbjct: 361 TKF 363



 Score = 45.4 bits (106), Expect(2) = 6e-37
 Identities = 19/35 (54%), Positives = 24/35 (68%)
 Frame = -2

Query: 1071 WNCRGLGGPSTISQLKEVLRLHLPDLVFLCETKKK 967
            WNCRG+G PS +S L+ +L    P +VFL ETK K
Sbjct: 7    WNCRGMGSPSALSALRRLLASENPQIVFLSETKLK 41


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1936

 Score =  137 bits (346), Expect(2) = 2e-36
 Identities = 82/306 (26%), Positives = 139/306 (45%), Gaps = 1/306 (0%)
 Frame = -3

Query: 917  WISVEPNGYRGGLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWVIFVYASTDASLR 738
            ++ V   G  GGL ++W  +VSV     ++  I+  + +     ++ + FVY       R
Sbjct: 691  FVGVSSEGKSGGLALYWDESVSVDVKDINKRYIDAYVRLSPDEPQWHITFVYGEPRVENR 750

Query: 737  KEQWVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILEMGDIA 558
               W  L   +      W++ GDFN+     +      R +  + +FRD ++  ++ D+ 
Sbjct: 751  HRMWSLLRTIRQSSALPWMVIGDFNETLWQFEHFSKNPRCETQMQNFRDALYDCDLQDLG 810

Query: 557  FRGYPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLLLNVLAE 378
            F+G P+T+ N R+G   ++ R+DR      W   FP A V+H+    SDHS +LL  + +
Sbjct: 811  FKGVPHTYDNRRDGWRNVKVRLDRAVADDKWRDLFPEAQVSHLVSPCSDHSPILLEFIVK 870

Query: 377  NGV-GNKKRFAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMALTHWSKNN 201
            +     +K   +   W   P    V+E AW      T +  I   +     AL  WSK  
Sbjct: 871  DTTRPRQKCLHYEIVWEREPESVQVIEEAWINAGVKTDLGDINIALGRVMSALRSWSKTK 930

Query: 200  KTNAAKAIELCKNKLNLLRQEGGHRNWKEWNVVKTALSKAYSEEEKFWGQKARISWLQEG 21
              N  K +E  + KL  L      R+          +++    EE  W Q++R++WL+EG
Sbjct: 931  VKNVGKELEKARKKLEDLIASNAARS--SIRQATDHMNEMLYREEMLWLQRSRVNWLKEG 988

Query: 20   DRNSKF 3
            DRN++F
Sbjct: 989  DRNTRF 994



 Score = 42.7 bits (99), Expect(2) = 2e-36
 Identities = 17/40 (42%), Positives = 26/40 (65%)
 Frame = -2

Query: 1089 SMKVCVWNCRGLGGPSTISQLKEVLRLHLPDLVFLCETKK 970
            +M    WNCRGLG  +T+  L+ +++     LVFLCET++
Sbjct: 635  AMSCLAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQ 674


>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score =  159 bits (401), Expect = 3e-36
 Identities = 96/310 (30%), Positives = 160/310 (51%), Gaps = 3/310 (0%)
 Frame = -3

Query: 923 DRWISVEPNGYRGGLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWVIFVYASTDAS 744
           D+  +VEP G  GGL + W ++V V   F  +  ++ +++  G+V  F V  VY   D S
Sbjct: 17  DQVYTVEPVGKCGGLALLWKSSVQVDLKFVDKNLMDAQVQF-GAVN-FCVSCVYGDPDRS 74

Query: 743 LRKEQWVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILEMGD 564
            R + W  + +        W M GDFNDI  N +K GG  RS +    F + I   ++ +
Sbjct: 75  KRSQAWERISRIGVGRRDKWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVE 134

Query: 563 IAFRGYPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLLLNVL 384
           +   G  +TW+  R GD +I+ R+DR FG+ +W   FP +  T +    SDH  +L+ ++
Sbjct: 135 MPAHGNGFTWAGRR-GDHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLIKLM 193

Query: 383 AENGVGNKKRFAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMALTHWSKN 204
           +      + +F F+K +L    +   +   W++   GT +  +  +++ CR +L+ W K 
Sbjct: 194 SSQD-SYRGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTNI-SVADRLRACRKSLSSWKKQ 251

Query: 203 NKTNAAKAIELCKNKLNLLRQEGGHRNW---KEWNVVKTALSKAYSEEEKFWGQKARISW 33
           N  N+   I    N+L    ++     W   +  +V+K  L+KAY EEE +W QK+R  W
Sbjct: 252 NNLNSLDKI----NQLEAALEKEQSLVWPIFQRVSVLKKDLAKAYREEEAYWKQKSRQKW 307

Query: 32  LQEGDRNSKF 3
           L+ G+RNSK+
Sbjct: 308 LRSGNRNSKY 317


>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score =  159 bits (401), Expect = 3e-36
 Identities = 96/310 (30%), Positives = 160/310 (51%), Gaps = 3/310 (0%)
 Frame = -3

Query: 923 DRWISVEPNGYRGGLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWVIFVYASTDAS 744
           D+  +VEP G  GGL + W ++V V   F  +  ++ +++  G+V  F V  VY   D S
Sbjct: 20  DQVYTVEPVGKCGGLALLWKSSVQVDLKFVDKNLMDAQVQF-GAVN-FCVSCVYGDPDRS 77

Query: 743 LRKEQWVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILEMGD 564
            R + W  + +        W M GDFNDI  N +K GG  RS +    F + I   ++ +
Sbjct: 78  KRSQAWERISRIGVGRRDKWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVE 137

Query: 563 IAFRGYPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLLLNVL 384
           +   G  +TW+  R GD +I+ R+DR FG+ +W   FP +  T +    SDH  +L+ ++
Sbjct: 138 MPAHGNGFTWAGRR-GDHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLIKLM 196

Query: 383 AENGVGNKKRFAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMALTHWSKN 204
           +      + +F F+K +L    +   +   W++   GT +  +  +++ CR +L+ W K 
Sbjct: 197 SSQD-SYRGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTNI-SVADRLRACRKSLSSWKKQ 254

Query: 203 NKTNAAKAIELCKNKLNLLRQEGGHRNW---KEWNVVKTALSKAYSEEEKFWGQKARISW 33
           N  N+   I    N+L    ++     W   +  +V+K  L+KAY EEE +W QK+R  W
Sbjct: 255 NNLNSLDKI----NQLEAALEKEQSLVWPIFQRVSVLKKDLAKAYREEEAYWKQKSRQKW 310

Query: 32  LQEGDRNSKF 3
           L+ G+RNSK+
Sbjct: 311 LRSGNRNSKY 320


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  133 bits (334), Expect(2) = 3e-36
 Identities = 84/302 (27%), Positives = 148/302 (49%), Gaps = 4/302 (1%)
 Frame = -3

Query: 896 GYRGGLLVFWSAN-VSVCQVFCSQFCIEVELEMLGSVGKFWVIFVYASTDASLRKEQWVF 720
           G  GGL +FW    +S   V  SQ  I  ++   G V ++  + +Y   +   + + W  
Sbjct: 63  GRAGGLCMFWKEETISFRMVSFSQNHICGDVGSNGDV-RWRFVGIYGWPEEENKHKTWAL 121

Query: 719 LEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILEMGDIAFRGYPY 540
           ++    ++    V GGDFN+I S ++K+GG +R + ++  FR+ +    +GD+ F G  +
Sbjct: 122 IKGLCDEYEGPIVFGGDFNEILSYDEKEGGASRERRAIVGFRNVMDDCSLGDLRFVGQWH 181

Query: 539 TWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLLLNVLAENGVGNK 360
           TW   R  +  I ER+DR   S  W+  FP A + H     SDH+ ++L  L   G+  +
Sbjct: 182 TWERGRSPESRIRERLDRFIVSRSWLHLFPEAFIDHQVRYCSDHAAIVLRCLGNEGMPRR 241

Query: 359 KR--FAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMALTHWSKNNKTNAA 186
           +   F F   WL     + VV  AWN    G    +I +K+      L  WSK    +  
Sbjct: 242 RAGGFWFETFWLLDDTCEEVVRGAWNAAEGG----RICEKLGAVARELQGWSKKTFGSLR 297

Query: 185 KAIELCKNKLNLLRQEG-GHRNWKEWNVVKTALSKAYSEEEKFWGQKARISWLQEGDRNS 9
           K IE  + KL+  + E     +W+    ++  L + +++ E +W  ++R++ +++GDRN+
Sbjct: 298 KKIEAVEKKLHAAQGEATSIDSWERCVGLERELDELHAKNEAYWYLRSRVAEVKDGDRNT 357

Query: 8   KF 3
            +
Sbjct: 358 SY 359



 Score = 47.0 bits (110), Expect(2) = 3e-36
 Identities = 18/41 (43%), Positives = 28/41 (68%)
 Frame = -2

Query: 1086 MKVCVWNCRGLGGPSTISQLKEVLRLHLPDLVFLCETKKKK 964
            MK+  WNC+G+G P T+ QL+ ++  + PD +F+ ETK  K
Sbjct: 1    MKILCWNCQGMGNPWTVRQLRRLMASNTPDSLFMSETKVTK 41


>gb|EEE63282.1| hypothetical protein OsJ_18092 [Oryza sativa Japonica Group]
          Length = 763

 Score =  158 bits (399), Expect = 4e-36
 Identities = 98/314 (31%), Positives = 155/314 (49%), Gaps = 4/314 (1%)
 Frame = -3

Query: 932  KLDDRWISVEPNGYR--GGLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWV-IFVY 762
            K +D   S++ NG    GG+ +FW  ++ V     S     +++ +  S G+ W   FVY
Sbjct: 344  KEEDSSTSLDMNGRGKGGGIALFWDESIKV--ELKSYNVRHIDVLITESDGERWRGTFVY 401

Query: 761  ASTDASLRKEQWVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIH 582
                +  R + W  L + KS     W+M GDFN+     +      RS+  + DFR+ + 
Sbjct: 402  GEPRSQDRLKMWTLLRRIKSNAALPWLMIGDFNEAMWQSEHWSRVRRSERQMKDFREALA 461

Query: 581  ILEMGDIAFRGYPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSL 402
              ++ D+ F G P+T+ NN+ G   +  R+DR   SP W+ +F  A +TH+   SSDH  
Sbjct: 462  DCDLHDLGFHGVPWTYDNNQRGANNVRVRLDRAVASPAWLGRFRQASITHLVTPSSDHVP 521

Query: 401  LLLNVLAENGVGNKKRFA-FNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMA 225
            LLL  L E  V N  + + +   W      D+VV+ AW +      +   + K+ Y    
Sbjct: 522  LLLERLEEELVHNSVKISRYEAIWEREESFDSVVQQAWGEGEVVRNLGDFKTKMAYTMDE 581

Query: 224  LTHWSKNNKTNAAKAIELCKNKLNLLRQEGGHRNWKEWNVVKTALSKAYSEEEKFWGQKA 45
            L  WSK+   N  K IE  + KL  LR  G   +  E   +K  L +    EE +W Q++
Sbjct: 582  LVKWSKSKIGNIKKGIESRRKKLGELRMAGMLDSEPEVKKIKEQLQEMLRREEIWWRQRS 641

Query: 44   RISWLQEGDRNSKF 3
            +I+WL+EGD+N+K+
Sbjct: 642  QITWLKEGDKNTKY 655


>gb|AAV43829.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|55168037|gb|AAV43905.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 796

 Score =  158 bits (399), Expect = 4e-36
 Identities = 98/314 (31%), Positives = 155/314 (49%), Gaps = 4/314 (1%)
 Frame = -3

Query: 932  KLDDRWISVEPNGYR--GGLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWV-IFVY 762
            K +D   S++ NG    GG+ +FW  ++ V     S     +++ +  S G+ W   FVY
Sbjct: 377  KEEDSSTSLDMNGRGKGGGIALFWDESIKV--ELKSYNVRHIDVLITESDGERWRGTFVY 434

Query: 761  ASTDASLRKEQWVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIH 582
                +  R + W  L + KS     W+M GDFN+     +      RS+  + DFR+ + 
Sbjct: 435  GEPRSQDRLKMWTLLRRIKSNAALPWLMIGDFNEAMWQSEHWSRVRRSERQMKDFREALA 494

Query: 581  ILEMGDIAFRGYPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSL 402
              ++ D+ F G P+T+ NN+ G   +  R+DR   SP W+ +F  A +TH+   SSDH  
Sbjct: 495  DCDLHDLGFHGVPWTYDNNQRGANNVRVRLDRAVASPAWLGRFRQASITHLVTPSSDHVP 554

Query: 401  LLLNVLAENGVGNKKRFA-FNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMA 225
            LLL  L E  V N  + + +   W      D+VV+ AW +      +   + K+ Y    
Sbjct: 555  LLLERLEEELVHNSVKISRYEAIWEREESFDSVVQQAWGEGEVVRNLGDFKTKMAYTMDE 614

Query: 224  LTHWSKNNKTNAAKAIELCKNKLNLLRQEGGHRNWKEWNVVKTALSKAYSEEEKFWGQKA 45
            L  WSK+   N  K IE  + KL  LR  G   +  E   +K  L +    EE +W Q++
Sbjct: 615  LVKWSKSKIGNIKKGIESRRKKLGELRMAGMLDSEPEVKKIKEQLQEMLRREEIWWRQRS 674

Query: 44   RISWLQEGDRNSKF 3
            +I+WL+EGD+N+K+
Sbjct: 675  QITWLKEGDKNTKY 688


>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score =  157 bits (397), Expect(2) = 5e-36
 Identities = 95/306 (31%), Positives = 148/306 (48%)
 Frame = -3

Query: 920 RWISVEPNGYRGGLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWVIFVYASTDASL 741
           R  +V   G  GGL +FW  +++V     +   I+V +  L     +   FVY    A  
Sbjct: 35  RCFTVNGVGKGGGLALFWDESMNVVLKSYNSRHIDVLITELDCC-TWRATFVYGEPRAQD 93

Query: 740 RKEQWVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILEMGDI 561
           R   W  L + +S  G  W+M GDFN+     + K  R RS+  + DFR+ +   ++ DI
Sbjct: 94  RHLMWSLLRRIRSNSGDPWLMIGDFNEAMWQTEHKSHRKRSESQMRDFREVLSECDLHDI 153

Query: 560 AFRGYPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLLLNVLA 381
            F+G P+T+ N +     ++ R+DR   SP W  +FP A++TH+   SSDH+ LLL    
Sbjct: 154 GFQGAPWTFCNMQREGRNVKVRLDRGVASPAWSSRFPQAVITHLTTPSSDHAPLLLEREE 213

Query: 380 ENGVGNKKRFAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMALTHWSKNN 201
                  K   + + W     +  V++ AW      + +  I  K+K     L  WSK+ 
Sbjct: 214 TTLARPMKIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKDK 273

Query: 200 KTNAAKAIELCKNKLNLLRQEGGHRNWKEWNVVKTALSKAYSEEEKFWGQKARISWLQEG 21
             N  K I+  + KL  LR  G      E + VK  L +    EE +W Q++RI+WL+EG
Sbjct: 274 IGNVRKKIKDLREKLGELRNIGLLDTDNEVHSVKKELEEMLHREEIWWKQRSRITWLKEG 333

Query: 20  DRNSKF 3
           D N+++
Sbjct: 334 DLNTRY 339



 Score = 21.9 bits (45), Expect(2) = 5e-36
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 1011 LHLPDLVFLCETKKKKIFHYNSL 943
            +H P +VFL ET++ +    N +
Sbjct: 9    IHRPKIVFLAETRQDQYMVQNRI 31


>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
           gi|241936261|gb|EES09406.1| hypothetical protein
           SORBIDRAFT_05g005061 [Sorghum bicolor]
          Length = 753

 Score =  132 bits (333), Expect(2) = 8e-36
 Identities = 84/313 (26%), Positives = 144/313 (46%), Gaps = 6/313 (1%)
 Frame = -3

Query: 923 DRWISVEPNGYRGGLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWVIFVYASTDAS 744
           D   +V  +G  GGL +FW+ +V +     S + I+  +   G   +  + F+Y   + S
Sbjct: 54  DNSFAVNSSGRSGGLGLFWNNDVLLSIQKYSNYHIDTIISEHGKEPRR-MSFIYGEPNRS 112

Query: 743 LRKEQWVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILEMGD 564
            R   W  ++Q +S     WV  GDFN+I   E++ G   R +  +   RD + + ++ D
Sbjct: 113 FRYRTWDIMKQMRSDTDLPWVCMGDFNEILRREEQLGPNEREEYLMEGVRDAVDMCQLRD 172

Query: 563 IAFRGYPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLLLNVL 384
           I + G  +T+     G  F+  R+DR   S +W  +FP A V H+    SDH  +LL+ +
Sbjct: 173 IGYIGLDWTFEKKVAGGHFVRVRLDRALASVNWCARFPLAAVQHLTAVKSDHCPILLSHV 232

Query: 383 A----ENGVGNKKRFAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMALTH 216
                E G    K F +   W  +  + +++E  W        +  ++ K+ +    L  
Sbjct: 233 PDERNEGGGCQGKPFRYELMWETNERLSSLIEQIWKNGQHCNSVKDMKDKLFHLGEELKS 292

Query: 215 WSKNNKTNAAKAIELCKNKLNLLRQEGGHR--NWKEWNVVKTALSKAYSEEEKFWGQKAR 42
           W         K + + K +L  LR +      + +E  +V   +   Y +EE  W Q++R
Sbjct: 293 WGGKTFGVVRKELRVQKKRLEQLRADPSRNTVSEEEQKIVNRIILLNY-QEEIMWRQRSR 351

Query: 41  ISWLQEGDRNSKF 3
           I+WL EGD N+KF
Sbjct: 352 ITWLHEGDSNTKF 364



 Score = 45.8 bits (107), Expect(2) = 8e-36
 Identities = 16/41 (39%), Positives = 29/41 (70%)
 Frame = -2

Query: 1086 MKVCVWNCRGLGGPSTISQLKEVLRLHLPDLVFLCETKKKK 964
            MK   WNCRG+G P+T+ +L+++ + + P ++F+ ET+  K
Sbjct: 1    MKTLCWNCRGIGNPATVKELRDLAKDYAPSVMFIMETQISK 41


>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score =  156 bits (394), Expect = 2e-35
 Identities = 94/306 (30%), Positives = 148/306 (48%)
 Frame = -3

Query: 920 RWISVEPNGYRGGLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWVIFVYASTDASL 741
           R  +V   G  GGL +FW  +++V     +   I+V +  L     +   F+Y    A  
Sbjct: 10  RCFTVNGVGKGGGLALFWDESMNVVLKSYNSRHIDVLITELDCC-TWRATFLYGEPRAQD 68

Query: 740 RKEQWVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILEMGDI 561
           R   W  L + +S  G  W+M GDFN+     + K  R RS+  + DFR+ +   ++ DI
Sbjct: 69  RHLMWSLLRRIRSNSGDPWLMIGDFNEAMWQTEHKSHRKRSESQMRDFREVLSECDLHDI 128

Query: 560 AFRGYPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLLLNVLA 381
            F+G P+T+ N +     ++ R+DR   SP W  +FP A++TH+   SSDH+ LLL    
Sbjct: 129 GFQGAPWTFCNMQREGRNVKVRLDRGVASPAWSSRFPQAVITHLTTPSSDHAPLLLEREE 188

Query: 380 ENGVGNKKRFAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMALTHWSKNN 201
                  K   + + W     +  V++ AW      + +  I  K+K     L  WSK+ 
Sbjct: 189 TTLARPMKIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKDK 248

Query: 200 KTNAAKAIELCKNKLNLLRQEGGHRNWKEWNVVKTALSKAYSEEEKFWGQKARISWLQEG 21
             N  K I+  + KL  LR  G      E + VK  L +    EE +W Q++RI+WL+EG
Sbjct: 249 IGNVRKKIKDLREKLGELRNIGLLDTDNEVHSVKKELEEMLHREEIWWKQRSRITWLKEG 308

Query: 20  DRNSKF 3
           D N+++
Sbjct: 309 DLNTRY 314


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score =  134 bits (336), Expect(2) = 3e-35
 Identities = 92/297 (30%), Positives = 142/297 (47%), Gaps = 9/297 (3%)
 Frame = -3

Query: 911 SVEPNGYRGGLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWVIFVYASTDASLRKE 732
           +VEP G  GGL +F+S +  V  ++     I++E  + G+  + ++ FVY       R+ 
Sbjct: 58  TVEPIGNSGGLALFYSRDYPVKFIYVCDRLIDIETIIDGN--RVFITFVYGDPVVQYREL 115

Query: 731 QWVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILEMGDIAFR 552
            W  L +      + W M GDFN+I  N +K+GG+ RS+ S   F   I    M D    
Sbjct: 116 VWKRLTRIGIVRSEPWFMIGDFNEIIGNHEKRGGKKRSESSFLPFCCMIENCGMIDFPST 175

Query: 551 GYPYTWSN-------NREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLLL 393
           G  ++W          R+  + I+ R+DR  G+ +W   + H  V ++    SDH  LL 
Sbjct: 176 GSLFSWVGKRSCGVAGRKRRDLIKCRLDRAMGNEEWHSIYSHTNVEYLQHRGSDHKPLLA 235

Query: 392 NVLAENGVGNKKRFAFNKNWLESPGIDNVVEVAWNKQVR--GTPMFQIQQKIKYCRMALT 219
           ++         K F F+K W+  PG    V+  W    R  G P F   QKIK CR  ++
Sbjct: 236 SI-QNKPYRPYKHFIFDKRWINKPGFKESVQEGWAFPSRGEGVPFF---QKIKNCRQTIS 291

Query: 218 HWSKNNKTNAAKAIELCKNKLNLLRQEGGHRNWKEWNVVKTALSKAYSEEEKFWGQK 48
            W K+NKTN  K I    ++L+ L  E  + + ++   +K  L +AY +EE FW  K
Sbjct: 292 IWKKSNKTNTEKLILELHSQLD-LAYEDENFSTEDLLALKWKLCQAYRDEEIFWKLK 347



 Score = 42.7 bits (99), Expect(2) = 3e-35
 Identities = 17/46 (36%), Positives = 30/46 (65%)
 Frame = -2

Query: 1086 MKVCVWNCRGLGGPSTISQLKEVLRLHLPDLVFLCETKKKKIFHYN 949
            M++  WNC+G+G  +T  +L+E+ R++ P  +FL ETK   ++  N
Sbjct: 1    MRLISWNCQGVGPKTTSRRLEEMCRMYSPGFLFLSETKNDLVYLQN 46


>gb|EPS61587.1| hypothetical protein M569_13207, partial [Genlisea aurea]
          Length = 475

 Score =  129 bits (324), Expect(2) = 1e-34
 Identities = 78/309 (25%), Positives = 147/309 (47%), Gaps = 7/309 (2%)
 Frame = -3

Query: 908 VEPNGYRGGLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWVIFVYASTDASLRKEQ 729
           V+  G  GGL +FW   + V  +  S++ I+V + +     +  V   Y +  +S R + 
Sbjct: 53  VDAVGASGGLALFWKKELDVSLLSYSKWYIDVSINISFGDVQCRVTGFYDNPISSSRPDS 112

Query: 728 WVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILEMGDIAFRG 549
           W  L +      + W+  GDFN++    +     +R    +  FR  +    + D+ + G
Sbjct: 113 WNLLRRLHRHSLRPWICVGDFNEVLFPHEVSSLASRPTAQMVGFRRALMDCGLTDLPYHG 172

Query: 548 YPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLLLNVL---AE 378
           +P+TWSN R+  + +  R+DR   S  W+  +P    +H++   SDH+ L +      A 
Sbjct: 173 HPFTWSNKRKHPQTVRARLDRAVASTSWLQCYPCTSTSHLSFGGSDHAPLWIQSAPPSAG 232

Query: 377 NGVGNKKRFAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMALTHWSKNNK 198
           +G+   +RF F   W++ PG D+ +  AW    +G P   +Q K+   R++L  W ++  
Sbjct: 233 DGLRKSRRFRFEARWMQLPGCDSTIRTAWTSS-QGPPS-TLQPKLGTTRISLLKWYQHQI 290

Query: 197 TNAAKAIELCKNKLNLL----RQEGGHRNWKEWNVVKTALSKAYSEEEKFWGQKARISWL 30
           +     I+  + +L  +    R +      K+   ++  L+    +EE FW Q+++  WL
Sbjct: 291 SPIKANIKRVETELATIAVSTRDDIFMAREKQ---LQCELAGYLQQEELFWKQRSKTHWL 347

Query: 29  QEGDRNSKF 3
            +GDRN+ +
Sbjct: 348 AKGDRNTAY 356



 Score = 45.4 bits (106), Expect(2) = 1e-34
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -2

Query: 1071 WNCRGLGGPSTISQLKEVLRLHLPDLVFLCETK 973
            WNC+G+G P T+ +LKE++    P  +FLCETK
Sbjct: 1    WNCQGMGSPWTVRRLKELIVQFSPSFIFLCETK 33


>ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304768 [Fragaria vesca
           subsp. vesca]
          Length = 1687

 Score =  122 bits (307), Expect(2) = 4e-34
 Identities = 93/302 (30%), Positives = 140/302 (46%), Gaps = 7/302 (2%)
 Frame = -3

Query: 887 GGLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWVIFVYASTDASLRKEQWVFLEQ- 711
           GGL + W   + V  V  SQ  I+V +   G V +  V   Y + D+ LR   W  L + 
Sbjct: 67  GGLAMCWKNKMEVRPVGSSQGHIDVAVLFKGQVIR--VTGFYGNPDSQLRHFSWDLLRRI 124

Query: 710 AKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILEMGDIAFRGYPYTWS 531
           AKS  G  W++ GDFN++    DK+GG  R +  +  FR+ +    + ++ F G  +TW 
Sbjct: 125 AKSVRGP-WIVFGDFNELLCIGDKRGGGERPEAQIRRFREAVDECGLQEVEFSGPTFTWK 183

Query: 530 NNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDH-SLLL----LNVLAENGVG 366
                   + ER+DR F + +  + FP     HV + +SDH SL+L    LN   + G  
Sbjct: 184 RGT-----LLERLDRCFINEEAGVLFPRFHEAHVDVGASDHLSLVLFSEGLNCGRKGGWK 238

Query: 365 NKKRFAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMALTHWSKNNKTNAA 186
             +RF F   W +      VV  AW  Q  G  +  ++ K+      L  W++N      
Sbjct: 239 GLRRFQFEPFWAKEQESKQVVADAW--QSDGNQLNNVRAKLAGVSKELQRWNENKFGLIP 296

Query: 185 KAIELCKNKLNLLRQEGGHR-NWKEWNVVKTALSKAYSEEEKFWGQKARISWLQEGDRNS 9
           K I     +L     +          N +   L+K+   EE  W Q++RI+WLQEGDRN+
Sbjct: 297 KKIRQLNKELEQCPFDSSDEVVQNRRNAIVAELNKSLEIEESIWRQRSRINWLQEGDRNT 356

Query: 8   KF 3
           KF
Sbjct: 357 KF 358



 Score = 50.1 bits (118), Expect(2) = 4e-34
 Identities = 24/36 (66%), Positives = 25/36 (69%)
 Frame = -2

Query: 1071 WNCRGLGGPSTISQLKEVLRLHLPDLVFLCETKKKK 964
            WN RGLG P T   LK+ LR   PDLVFL ETKKKK
Sbjct: 6    WNVRGLGNPHTFRALKKFLRAKDPDLVFLMETKKKK 41


>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1138

 Score =  151 bits (381), Expect = 5e-34
 Identities = 94/307 (30%), Positives = 149/307 (48%)
 Frame = -3

Query: 923 DRWISVEPNGYRGGLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWVIFVYASTDAS 744
           DR  +V P G  GGL +FW   V++   +  +  I+ +++  GS   F+V  VY     S
Sbjct: 20  DRVYTVNPVGLSGGLALFWKKGVNIDVRYADKNLIDFQIQF-GSYD-FFVSCVYGDPAFS 77

Query: 743 LRKEQWVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILEMGD 564
            +   W  + +      + W M GDFN I  N +K+GG  R   S   F+D +   +M +
Sbjct: 78  NKHLVWEKISKIGLNRKEPWCMLGDFNVILHNGEKRGGPRRGDSSFISFKDMLECCDMLE 137

Query: 563 IAFRGYPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLLLNVL 384
           +  +G P++W   R    +I+ R+DR FG+ +W   FP +    +    SD   +L+  L
Sbjct: 138 LPSKGNPFSWGGKR-NSLWIQCRLDRCFGNKNWFRHFPVSNQEFLDKRGSDRRPVLVR-L 195

Query: 383 AENGVGNKKRFAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMALTHWSKN 204
           ++     K  F F+K     P +   ++ AWN   R   M Q+ +++K CR AL+ W + 
Sbjct: 196 SKTKEEYKGNFRFDKRLFNQPLVKEAIQQAWNGNQRVGGM-QVLERLKKCRSALSRWKQE 254

Query: 203 NKTNAAKAIELCKNKLNLLRQEGGHRNWKEWNVVKTALSKAYSEEEKFWGQKARISWLQE 24
           N +N+   I   +  L  L Q  G    K    +K  L KA  +EE FW QK+R  W+  
Sbjct: 255 NNSNSLTCISQARAALE-LEQSSGFPRSKVVFTLKNDLCKANQDEETFWSQKSRAKWMHG 313

Query: 23  GDRNSKF 3
           GD+N+ F
Sbjct: 314 GDKNTSF 320


>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|62733115|gb|AAX95232.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group]
          Length = 1324

 Score =  131 bits (329), Expect(2) = 2e-33
 Identities = 94/322 (29%), Positives = 143/322 (44%), Gaps = 16/322 (4%)
 Frame = -3

Query: 920  RWISVEPN-------GYRGGLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWVIF-- 768
            RW    PN       G  GGL VFW   +++     S+  ++V++        FW  F  
Sbjct: 495  RWKLGMPNLVVKDCQGKSGGLAVFWKKEINLRLRTVSRLFMDVDVM---EDDGFWWRFTG 551

Query: 767  VYASTDASLRKEQWVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDF 588
            VY    +  +   W  L    +  G+LW+  GDFN++  + +K+ G  ++Q  +  FR  
Sbjct: 552  VYGEPRSDKKDLTWKALRTLNATKGELWLCVGDFNEVLFSWEKERGHAKAQSCMDRFRQT 611

Query: 587  IHILEMGDIAFRGYPYTWSNN---REGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSS 417
            +    + ++ F G P+TW NN   R+G  +I ER+DR     DW  +FP   V       
Sbjct: 612  LDCCSLSNLGFTGDPFTWRNNWCVRDG--YIRERLDRAVADSDWCCRFPSFRVRKGDPRH 669

Query: 416  SDHSLLLL---NVLAENGVGNKKRFAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQK 246
            SDH  +++   N +  NG  +K  F F   W        +VE AW   V G    ++   
Sbjct: 670  SDHHPVIVTTSNEVIWNGGRSKPGFRFEAGWAREEHCAPIVENAWKLSV-GPRGGKVMDA 728

Query: 245  IKYCRMALTHWSKNNKTNAAKAIELCKNKLNLLRQEG-GHRNWKEWNVVKTALSKAYSEE 69
            I+     L  WSKN   +  K I+  K  L   R+            V+K  L K   + 
Sbjct: 729  IREVAANLWDWSKNFLGDLEKRIKKAKQALEAHRRSPISSSTASREAVLKYRLDKLEEQR 788

Query: 68   EKFWGQKARISWLQEGDRNSKF 3
            E +W Q+A   WL++GDRN+KF
Sbjct: 789  ELYWRQRANQHWLEKGDRNTKF 810



 Score = 39.7 bits (91), Expect(2) = 2e-33
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = -2

Query: 1086 MKVCVWNCRGLGGPSTISQLKEVLRLHLPDLVFLCETK 973
            MK+  WNCRGLG   T+  L  + +   PD++FL  TK
Sbjct: 448  MKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTK 485