BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00020231
         (588 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328268.1| predicted protein [Populus trichocarpa] gi|5...    94   2e-17
gb|ABK95971.1| unknown [Populus trichocarpa]                           94   2e-17
gb|EOX98874.1| Tetratricopeptide repeat-like superfamily protein...    83   5e-14
ref|XP_006486839.1| PREDICTED: pentatricopeptide repeat-containi...    75   2e-11
gb|EXC31540.1| hypothetical protein L484_006572 [Morus notabilis]      74   3e-11
ref|XP_006409337.1| hypothetical protein EUTSA_v10023059mg [Eutr...    74   3e-11
ref|XP_006422430.1| hypothetical protein CICLE_v10027827mg [Citr...    74   4e-11
ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containi...    74   4e-11
ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containi...    74   4e-11
sp|Q9SII7.2|PP159_ARATH RecName: Full=Pentatricopeptide repeat-c...    72   8e-11
ref|XP_004231461.1| PREDICTED: pentatricopeptide repeat-containi...    68   2e-09
ref|XP_006299587.1| hypothetical protein CARUB_v10015765mg [Caps...    67   4e-09
ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]    65   1e-08
ref|XP_002520932.1| pentatricopeptide repeat-containing protein,...    65   2e-08
ref|XP_004292418.1| PREDICTED: pentatricopeptide repeat-containi...    61   2e-07
ref|XP_002886104.1| pentatricopeptide repeat-containing protein ...    58   2e-06

>ref|XP_002328268.1| predicted protein [Populus trichocarpa]
           gi|566167839|ref|XP_006384846.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
           gi|550341614|gb|ERP62643.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
          Length = 749

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 47/83 (56%), Positives = 61/83 (73%)
 Frame = -3

Query: 250 MRLPIVTSGTNLQNLCHKIKESSSSGRWKEVLSHYREIKEMGVQLIDHAVFSHILKACLA 71
           MR   + SG+ L N   +IKESS++G+W+EV+SHY EIK+ G+Q +D +VF  ILKA   
Sbjct: 1   MRFSAIVSGSKLPNWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSF 60

Query: 70  LSFSLGKSVHASLIKQGFESFTS 2
           LS   GKS+HA LIKQGF+SFTS
Sbjct: 61  LSHRHGKSLHACLIKQGFDSFTS 83


>gb|ABK95971.1| unknown [Populus trichocarpa]
          Length = 749

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 47/83 (56%), Positives = 61/83 (73%)
 Frame = -3

Query: 250 MRLPIVTSGTNLQNLCHKIKESSSSGRWKEVLSHYREIKEMGVQLIDHAVFSHILKACLA 71
           MR   + SG+ L N   +IKESS++G+W+EV+SHY EIK+ G+Q +D +VF  ILKA   
Sbjct: 1   MRFSAIVSGSKLPNWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSF 60

Query: 70  LSFSLGKSVHASLIKQGFESFTS 2
           LS   GKS+HA LIKQGF+SFTS
Sbjct: 61  LSHRHGKSLHACLIKQGFDSFTS 83


>gb|EOX98874.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 742

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 45/83 (54%), Positives = 55/83 (66%)
 Frame = -3

Query: 250 MRLPIVTSGTNLQNLCHKIKESSSSGRWKEVLSHYREIKEMGVQLIDHAVFSHILKACLA 71
           MR P    G+ L +   +IKES   G+W EV SHY+E+K  GV   D +VF  ILKACL 
Sbjct: 1   MRFPTNLWGSKLPSWSLRIKESYRVGKWLEVFSHYQEMKRYGVHPSDPSVFPPILKACLN 60

Query: 70  LSFSLGKSVHASLIKQGFESFTS 2
           LS + GKSVHA LIKQG++SF S
Sbjct: 61  LSPTDGKSVHACLIKQGYQSFAS 83


>ref|XP_006486839.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Citrus sinensis]
          Length = 755

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
 Frame = -3

Query: 256 LGMRLPIVTSGT-NLQNLCHKIKESSSSGRWKEVLSHYREIKEMGVQLIDHAVFSHILKA 80
           L MR P  +  +  L+    ++KE S +G+W+E+ SHY E K++ V L D +V+  ++KA
Sbjct: 9   LAMRFPTTSLWSLRLRTWNLRVKELSKNGKWQELFSHYHETKKVVVDLNDPSVYPLVVKA 68

Query: 79  CLALSFSLGKSVHASLIKQGFESFTS 2
           C  LS+  G+ VHA L+KQG+ESFTS
Sbjct: 69  CSNLSYIHGRLVHACLVKQGYESFTS 94


>gb|EXC31540.1| hypothetical protein L484_006572 [Morus notabilis]
          Length = 743

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
 Frame = -3

Query: 250 MRLPIVTS--GTNLQNLCHKIKESSSSGRWKEVLSHYREIKEMGVQLIDHAVFSHILKAC 77
           MRLP +       L N    +K+  SSG+W+ VL H+ E+++ GVQL D  V+  ILKAC
Sbjct: 1   MRLPTIPMQLSQKLSNWYLMVKDLRSSGKWQAVLCHFHEMQKAGVQL-DPTVYPSILKAC 59

Query: 76  LALSFSLGKSVHASLIKQGFESFTS 2
             +SFS GKSVH  LIK G ES TS
Sbjct: 60  SNVSFSYGKSVHGCLIKLGLESHTS 84


>ref|XP_006409337.1| hypothetical protein EUTSA_v10023059mg [Eutrema salsugineum]
           gi|557110499|gb|ESQ50790.1| hypothetical protein
           EUTSA_v10023059mg [Eutrema salsugineum]
          Length = 741

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 38/75 (50%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
 Frame = -3

Query: 223 TNLQNLCHKIKESSSSGRWKEVLSHYREIKEMGVQLIDHAVFSHILKACLALSF-SLGKS 47
           + LQ L  KIK++SS+G+W+EV+S Y EI+  G+Q  D  VF  + KAC  LS+ S G+ 
Sbjct: 7   SKLQALSSKIKQASSNGKWREVVSGYSEIQRAGIQFKDPFVFPIVFKACAKLSWLSQGRC 66

Query: 46  VHASLIKQGFESFTS 2
           +HASL K+ FESF S
Sbjct: 67  IHASLFKREFESFVS 81


>ref|XP_006422430.1| hypothetical protein CICLE_v10027827mg [Citrus clementina]
           gi|557524364|gb|ESR35670.1| hypothetical protein
           CICLE_v10027827mg [Citrus clementina]
          Length = 825

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 33/66 (50%), Positives = 49/66 (74%)
 Frame = -3

Query: 199 KIKESSSSGRWKEVLSHYREIKEMGVQLIDHAVFSHILKACLALSFSLGKSVHASLIKQG 20
           ++KE S +G+W+E+ SHY E K++ V L D +V+  ++KAC  LS+  G+ VHA L+KQG
Sbjct: 19  RVKELSKNGKWQELFSHYHETKKVVVDLNDPSVYPLVVKACSNLSYIHGRLVHACLVKQG 78

Query: 19  FESFTS 2
           +ESFTS
Sbjct: 79  YESFTS 84


>ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 40/83 (48%), Positives = 50/83 (60%)
 Frame = -3

Query: 250 MRLPIVTSGTNLQNLCHKIKESSSSGRWKEVLSHYREIKEMGVQLIDHAVFSHILKACLA 71
           MR     +G  L +L  KIK++S SG W+E L  Y EI+  G QL D  V   ILKAC  
Sbjct: 1   MRFSNFQAGLRLSDLISKIKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSN 60

Query: 70  LSFSLGKSVHASLIKQGFESFTS 2
            SF+LG ++H  LIKQG +S TS
Sbjct: 61  TSFNLGTAMHGCLIKQGCQSSTS 83


>ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 40/83 (48%), Positives = 50/83 (60%)
 Frame = -3

Query: 250 MRLPIVTSGTNLQNLCHKIKESSSSGRWKEVLSHYREIKEMGVQLIDHAVFSHILKACLA 71
           MR     +G  L +L  KIK++S SG W+E L  Y EI+  G QL D  V   ILKAC  
Sbjct: 1   MRFSNFQAGLRLSDLISKIKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSN 60

Query: 70  LSFSLGKSVHASLIKQGFESFTS 2
            SF+LG ++H  LIKQG +S TS
Sbjct: 61  TSFNLGTAMHGCLIKQGCQSSTS 83


>sp|Q9SII7.2|PP159_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17210
          Length = 736

 Score = 72.4 bits (176), Expect = 8e-11
 Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
 Frame = -3

Query: 223 TNLQNLCHKIKESSSSGRWKEVLSHYREIKEMGVQLIDHAVFSHILKACLALSFSL-GKS 47
           + LQ L  KIK++S SG+W+EV+S Y EI+  GVQ  D  VF  + KAC  LS+   G+ 
Sbjct: 9   SKLQALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGRC 68

Query: 46  VHASLIKQGFESFTS 2
           + ASL+K+GFESF S
Sbjct: 69  IQASLLKRGFESFVS 83


>ref|XP_004231461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Solanum lycopersicum]
          Length = 752

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
 Frame = -3

Query: 211 NLCHKIKESSSSGRWKEVLSHYREIKEMGVQLIDHAVFSHILKACLALS--FSLGKSVHA 38
           N C +++E    G+ ++VL +YRE+ +  V+L+DH+VF  + KACL LS     G S+HA
Sbjct: 8   NWCSRLRELLFHGKSQDVLLYYRELNKTRVELMDHSVFPILFKACLNLSATHGHGNSIHA 67

Query: 37  SLIKQGFESFTS 2
           SL+KQGF +FTS
Sbjct: 68  SLVKQGFLAFTS 79


>ref|XP_006299587.1| hypothetical protein CARUB_v10015765mg [Capsella rubella]
           gi|482568296|gb|EOA32485.1| hypothetical protein
           CARUB_v10015765mg [Capsella rubella]
          Length = 740

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
 Frame = -3

Query: 223 TNLQNLCHKIKESSSSGRWKEVLSHYREIKEMGVQLIDHAVFSHILKACLALSFSL-GKS 47
           + L+    KIK++S +GRW+EV++ Y EI+  GVQ  D  VF  + KAC  LS+   G+ 
Sbjct: 9   SKLEAFSSKIKQASVNGRWREVVTGYLEIQRAGVQCNDPFVFPIVFKACGKLSWLFQGRC 68

Query: 46  VHASLIKQGFESFTS 2
           + ASL+K+GFESF S
Sbjct: 69  IQASLLKRGFESFAS 83


>ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Vitis vinifera]
          Length = 742

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
 Frame = -3

Query: 250 MRLPIVTSGTNLQNLCHKIKESSSSGRWK--EVLSHYREIKEMGVQLIDHAVFSHILKAC 77
           MR P       L N    IK+S++   W   E  S Y ++K+ G QL D  +   ILKAC
Sbjct: 1   MRFPTTPLAPKLPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKAC 60

Query: 76  LALSFSLGKSVHASLIKQGFESFTS 2
            +L    GKS+HASL+KQGF+S TS
Sbjct: 61  SSLPVRHGKSIHASLLKQGFDSLTS 85


>emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
          Length = 1007

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
 Frame = -3

Query: 250 MRLPIVTSGTNLQNLCHKIKESSSSGRWK--EVLSHYREIKEMGVQLIDHAVFSHILKAC 77
           MR P       L N    IK+S++   W   E  S Y ++K+ G QL D  +   ILKAC
Sbjct: 1   MRFPTTPLAPKLPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKAC 60

Query: 76  LALSFSLGKSVHASLIKQGFESFTS 2
            +L    GKS+HASL+KQGF+S TS
Sbjct: 61  SSLPVRHGKSIHASLLKQGFDSLTS 85


>ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539898|gb|EEF41477.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 757

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
 Frame = -3

Query: 199 KIKESSSSGRWKEVLSHYREIKEMGVQ--LIDHAVFSHILKACLALSFSLGKSVHASLIK 26
           +IKE SS+ +W EV+S Y EI   G+   L+D  +F  +LKAC  LS+  GK +HA LIK
Sbjct: 33  RIKELSSNEKWHEVISQYYEITNAGISHHLLDVTLFPPVLKACSYLSYIDGKCLHACLIK 92

Query: 25  QGFESFTS 2
             F+SFTS
Sbjct: 93  TAFDSFTS 100


>ref|XP_004292418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Fragaria vesca subsp. vesca]
          Length = 750

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
 Frame = -3

Query: 199 KIKESSSSGRWKEVLSHYREI-KEMGVQLIDHAVFSHILKACL-ALSFSLGKSVHASLIK 26
           K+++ SS+ +W E+L H+ ++ K  G+QL  +++F  ILKAC   LS S GKS+H  LIK
Sbjct: 11  KLRDLSSNAKWAELLCHFHQVNKAGGLQLPHYSIFPPILKACSNLLSHSYGKSIHGCLIK 70

Query: 25  QGFESFTS 2
            G +S+TS
Sbjct: 71  NGCDSYTS 78


>ref|XP_002886104.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331944|gb|EFH62363.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 723

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 32/74 (43%), Positives = 44/74 (59%)
 Frame = -3

Query: 223 TNLQNLCHKIKESSSSGRWKEVLSHYREIKEMGVQLIDHAVFSHILKACLALSFSLGKSV 44
           + LQ L  KIK++S +G+W+EV+S Y EI+  G+Q  D  VF  + KAC  LS+ L    
Sbjct: 7   SKLQALSSKIKQASVNGKWREVVSGYSEIQSAGIQFNDPFVFPIVFKACAKLSWLL---- 62

Query: 43  HASLIKQGFESFTS 2
                 QGFES+ S
Sbjct: 63  ------QGFESYVS 70