BLASTX nr result

ID: Rehmannia22_contig00020183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00020183
         (345 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY27495.1| Transducin/WD40 repeat-like superfamily protein, ...    62   8e-08
ref|XP_006448745.1| hypothetical protein CICLE_v10014170mg [Citr...    61   2e-07
ref|XP_006448744.1| hypothetical protein CICLE_v10014170mg [Citr...    61   2e-07
ref|XP_006495382.1| PREDICTED: putative E3 ubiquitin-protein lig...    58   1e-06
ref|XP_006468438.1| PREDICTED: putative E3 ubiquitin-protein lig...    58   1e-06
ref|XP_006468437.1| PREDICTED: putative E3 ubiquitin-protein lig...    58   1e-06
ref|XP_006468435.1| PREDICTED: putative E3 ubiquitin-protein lig...    58   1e-06

>gb|EOY27495.1| Transducin/WD40 repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 971

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 34/70 (48%), Positives = 43/70 (61%)
 Frame = +3

Query: 93  ASLHKLLSEEGFERQNSRXXXXXXXXXXXTRQQQDSVALPIYICHDRRSFDSSRQRVSEK 272
           +SL +LL+EEGFER  S            +R   +SVALPIYICHDR+S + S+   +EK
Sbjct: 3   SSLQELLTEEGFERGKSLKNPREVRLRNKSRAPDESVALPIYICHDRKSLEKSKDE-AEK 61

Query: 273 AVSLKGSSVF 302
            V   GSSVF
Sbjct: 62  TVIRNGSSVF 71


>ref|XP_006448745.1| hypothetical protein CICLE_v10014170mg [Citrus clementina]
           gi|557551356|gb|ESR61985.1| hypothetical protein
           CICLE_v10014170mg [Citrus clementina]
          Length = 954

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
 Frame = +3

Query: 90  MASLHKLLSEEGFERQNSRXXXXXXXXXXXTRQQ--QDSVALPIYICHDRRSFDSSRQRV 263
           MASL +LL+EEGFER + +            R     DS+ALPIYICHD +SFD S+QR 
Sbjct: 1   MASLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQR- 59

Query: 264 SEKAVSLKGSSV 299
           S+KAVS +  S+
Sbjct: 60  SDKAVSRQEYSI 71


>ref|XP_006448744.1| hypothetical protein CICLE_v10014170mg [Citrus clementina]
           gi|557551355|gb|ESR61984.1| hypothetical protein
           CICLE_v10014170mg [Citrus clementina]
          Length = 932

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
 Frame = +3

Query: 90  MASLHKLLSEEGFERQNSRXXXXXXXXXXXTRQQ--QDSVALPIYICHDRRSFDSSRQRV 263
           MASL +LL+EEGFER + +            R     DS+ALPIYICHD +SFD S+QR 
Sbjct: 1   MASLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQR- 59

Query: 264 SEKAVSLKGSSV 299
           S+KAVS +  S+
Sbjct: 60  SDKAVSRQEYSI 71


>ref|XP_006495382.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like, partial
           [Citrus sinensis]
          Length = 399

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
 Frame = +3

Query: 90  MASLHKLLSEEGFERQNSRXXXXXXXXXXXTRQQ--QDSVALPIYICHDRRSFDSSRQRV 263
           MASL +LL+EEGFER + +            R     DS+ALPIYICHD +SFD S+Q  
Sbjct: 1   MASLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQG- 59

Query: 264 SEKAVSLKGSSV 299
           S+KAVS +  S+
Sbjct: 60  SDKAVSRQEYSI 71


>ref|XP_006468438.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like isoform X4
           [Citrus sinensis]
          Length = 925

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
 Frame = +3

Query: 90  MASLHKLLSEEGFERQNSRXXXXXXXXXXXTRQQ--QDSVALPIYICHDRRSFDSSRQRV 263
           MASL +LL+EEGFER + +            R     DS+ALPIYICHD +SFD S+Q  
Sbjct: 1   MASLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQG- 59

Query: 264 SEKAVSLKGSSV 299
           S+KAVS +  S+
Sbjct: 60  SDKAVSRQEYSI 71


>ref|XP_006468437.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like isoform X3
           [Citrus sinensis]
          Length = 939

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
 Frame = +3

Query: 90  MASLHKLLSEEGFERQNSRXXXXXXXXXXXTRQQ--QDSVALPIYICHDRRSFDSSRQRV 263
           MASL +LL+EEGFER + +            R     DS+ALPIYICHD +SFD S+Q  
Sbjct: 1   MASLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQG- 59

Query: 264 SEKAVSLKGSSV 299
           S+KAVS +  S+
Sbjct: 60  SDKAVSRQEYSI 71


>ref|XP_006468435.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like isoform X1
           [Citrus sinensis] gi|568828208|ref|XP_006468436.1|
           PREDICTED: putative E3 ubiquitin-protein ligase LIN-like
           isoform X2 [Citrus sinensis]
          Length = 940

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
 Frame = +3

Query: 90  MASLHKLLSEEGFERQNSRXXXXXXXXXXXTRQQ--QDSVALPIYICHDRRSFDSSRQRV 263
           MASL +LL+EEGFER + +            R     DS+ALPIYICHD +SFD S+Q  
Sbjct: 1   MASLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQG- 59

Query: 264 SEKAVSLKGSSV 299
           S+KAVS +  S+
Sbjct: 60  SDKAVSRQEYSI 71


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