BLASTX nr result
ID: Rehmannia22_contig00020129
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia22_contig00020129 (717 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-... 50 6e-07 emb|CBI41056.3| unnamed protein product [Vitis vinifera] 50 6e-07 ref|XP_004289299.1| PREDICTED: uncharacterized protein LOC101298... 60 9e-07 ref|XP_004250243.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 47 5e-06 >ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera] Length = 687 Score = 50.1 bits (118), Expect(2) = 6e-07 Identities = 32/64 (50%), Positives = 36/64 (56%), Gaps = 22/64 (34%) Frame = +3 Query: 288 DSYSARPGPHECQGLEDFQSVLSTFTKY----------------------SIEFDRDDEL 401 D+ S+R G H GLEDFQSVL+TFT+Y SIEFDRDDEL Sbjct: 340 DTNSSREGYHA--GLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEL 397 Query: 402 FATA 413 FATA Sbjct: 398 FATA 401 Score = 30.0 bits (66), Expect(2) = 6e-07 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = +1 Query: 415 TAGVSRRIKIFEFS 456 TAGVSRRIK+FEFS Sbjct: 400 TAGVSRRIKVFEFS 413 >emb|CBI41056.3| unnamed protein product [Vitis vinifera] Length = 602 Score = 50.1 bits (118), Expect(2) = 6e-07 Identities = 32/64 (50%), Positives = 36/64 (56%), Gaps = 22/64 (34%) Frame = +3 Query: 288 DSYSARPGPHECQGLEDFQSVLSTFTKY----------------------SIEFDRDDEL 401 D+ S+R G H GLEDFQSVL+TFT+Y SIEFDRDDEL Sbjct: 255 DTNSSREGYHA--GLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEL 312 Query: 402 FATA 413 FATA Sbjct: 313 FATA 316 Score = 30.0 bits (66), Expect(2) = 6e-07 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = +1 Query: 415 TAGVSRRIKIFEFS 456 TAGVSRRIK+FEFS Sbjct: 315 TAGVSRRIKVFEFS 328 >ref|XP_004289299.1| PREDICTED: uncharacterized protein LOC101298373 [Fragaria vesca subsp. vesca] Length = 725 Score = 59.7 bits (143), Expect = 9e-07 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 5/70 (7%) Frame = +3 Query: 450 VFMAPRQPDDLQCGFFVMRYMRQIVKE-----LTSTDSSSLRAIFTQANYSRGDIDEVRS 614 V M P+QP +++CG++VMRYM++I++ T D L A Y++ ++DEVR Sbjct: 662 VLMGPKQPSNMECGYYVMRYMKEIIEGQDLSFATKWDGRKLNA------YTQTELDEVRC 715 Query: 615 EWADCVSNHI 644 EW D VSN++ Sbjct: 716 EWTDFVSNYV 725 >ref|XP_004250243.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Solanum lycopersicum] Length = 672 Score = 47.0 bits (110), Expect(2) = 5e-06 Identities = 28/51 (54%), Positives = 29/51 (56%), Gaps = 22/51 (43%) Frame = +3 Query: 327 GLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 413 GLEDFQSVLSTFT+Y SIEFDRDDELFATA Sbjct: 336 GLEDFQSVLSTFTRYSRLRVVAELRHSDIFHSANIVSSIEFDRDDELFATA 386 Score = 30.0 bits (66), Expect(2) = 5e-06 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = +1 Query: 415 TAGVSRRIKIFEFS 456 TAGVSRRIK+FEFS Sbjct: 385 TAGVSRRIKVFEFS 398