BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00019799
         (1222 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   114   8e-23
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   104   6e-20
gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indi...   104   6e-20
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo...   103   1e-19
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   103   1e-19
ref|XP_004298091.1| PREDICTED: uncharacterized protein LOC101303...   102   4e-19
gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Ze...   102   4e-19
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    99   3e-18
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...    99   3e-18
ref|XP_004292002.1| PREDICTED: uncharacterized protein LOC101312...    99   4e-18
gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japo...    98   6e-18
gb|EAY97143.1| hypothetical protein OsI_19065 [Oryza sativa Indi...    98   6e-18
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    98   6e-18
ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [S...    98   8e-18
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...    97   2e-17
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A...    97   2e-17
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626...    97   2e-17
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A...    97   2e-17
gb|EEE65549.1| hypothetical protein OsJ_21022 [Oryza sativa Japo...    97   2e-17
gb|EEE57938.1| hypothetical protein OsJ_08648 [Oryza sativa Japo...    97   2e-17

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  114 bits (285), Expect = 8e-23
 Identities = 98/360 (27%), Positives = 156/360 (43%), Gaps = 3/360 (0%)
 Frame = -2

Query: 1071 IMQIPINQEGSNDKRVWHWDGKGLFSVKSAYRLLSQTKKLEMDRQESSKGILSVGV-LWK 895
            I +IP+  +   D+ +W     G F+V+SAY       +L  DR+          + LW+
Sbjct: 998  IQRIPVALQKKPDQWMWMMSKNGQFTVRSAYY-----HELLEDRKTGPSTSRGPNLKLWQ 1052

Query: 894  SCWNLDIKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRA 715
              W   I  K+K F WK +HN L+   N+ K+GM  +  CP CG+ EE+   L + CD +
Sbjct: 1053 KIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDES 1112

Query: 714  MIIWKIVP--VCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSRNLW 541
               W I P  + + N     F++  W E     +      E   L   + W IW  RN W
Sbjct: 1113 SRAWYISPLRIHTGNIEAGSFRI--WVESLLDTHKD---TEWWALFWMICWNIWLGRNKW 1167

Query: 540  VFNKDKWNERDIVKYAIHDWLEFKVLNVPNSGRIKQSKDPHVVVAEPSLNTFVVGCHSLC 361
            VF K K   +++V+ A+   +EF+      S    ++ + H    E   +   VG   L 
Sbjct: 1168 VFEKKKLAFQEVVERAVRGVMEFEEECAHTSP--VETLNTH----ENGWSVPPVGMVKLN 1221

Query: 360  ISAINDLKLGSSFGGWLGNEHGKLLKAWTSSRDFIENPMEAILIGMRLALCTASEFGPRK 181
            + A     +G   GG + +  G +L A       +E+P  A    +R  L  A E G R 
Sbjct: 1222 VDAAVFKHVGIGMGGVVRDAEGDVLLATCCGGWAMEDPAMAEACSLRYGLKVAYEAGFRN 1281

Query: 180  VNVMIDDNDIASNLNKRLPFVGNGAKIAEDIFLLCFLFEHVVFLVQDSNCKFVCNRLARL 1
            + V +D   +   L  +   V    ++ +DI  L     +VVF     +C  V + LA++
Sbjct: 1282 LVVEMDCKKLFLQLRGKASDVTPFGRVVDDILYLASKCSNVVFEHVKRHCNKVAHLLAQM 1341


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  104 bits (260), Expect = 6e-20
 Identities = 85/324 (26%), Positives = 140/324 (43%), Gaps = 18/324 (5%)
 Frame = -2

Query: 1080 VSLIMQIPINQEGSNDKRVWHWDGKGLFSVKSAYRLLSQTKKLEMDRQESSKGILSVGV- 904
            V+ I  IP++ E   D   WH+D +G F+VKSAY++     + EM+R+ S  G   V   
Sbjct: 1241 VAAIKSIPVHVE-MEDVLAWHFDARGCFTVKSAYKV-----QREMERRASRNGCPGVSNW 1294

Query: 903  ------LWKSCWNLDIKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVV 742
                   WK  W L +  K+KHFLW++ HN L+   NL+ +GM  + RC MCG + E   
Sbjct: 1295 ESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAG 1354

Query: 741  DLFFHCDRAMIIWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELF----QERLQLSVFL 574
             LFF C     +W+ + +        + + +   +    N +  ++     ER    V L
Sbjct: 1355 HLFFKCKPVKKVWQALNL-------EELRSMLEQQTSGKNVLQSIYCRPENERTSAIVCL 1407

Query: 573  FWWIWKSRNLWVFNKDKWNERDIVKYAIHDWLEFKVLNV----PNSGRIKQSKDPHVVVA 406
            + W WK RN         +  ++    +    EF  +NV    P +G          V  
Sbjct: 1408 WQW-WKERNEVREGGIPRSPAELSHLIMSQAGEFVRMNVKEKSPRTGEC-------AVWR 1459

Query: 405  EPSLNTFVVGCHSLCISAINDLKLGSSFGGW---LGNEHGKLLKAWTSSRDFIENPMEAI 235
             P LN   +       S +         GGW   + ++ G +L+A      ++++   A 
Sbjct: 1460 RPPLNFVKINTDGAYSSNMKQ-------GGWGFVIKDQTGAVLQAGAGPAAYLQDAFHAE 1512

Query: 234  LIGMRLALCTASEFGPRKVNVMID 163
            ++    A+ TASE G  ++ +  D
Sbjct: 1513 VVACAAAIKTASERGMSRIELETD 1536


>gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indica Group]
          Length = 561

 Score =  104 bits (260), Expect = 6e-20
 Identities = 85/324 (26%), Positives = 140/324 (43%), Gaps = 18/324 (5%)
 Frame = -2

Query: 1080 VSLIMQIPINQEGSNDKRVWHWDGKGLFSVKSAYRLLSQTKKLEMDRQESSKGILSVGV- 904
            V+ I  IP++ E   D   WH+D +G F+VKSAY++     + EM+R+ S  G   V   
Sbjct: 181  VAAIKSIPVHVE-MEDVLAWHFDARGCFTVKSAYKV-----QREMERRASRNGCPGVSNW 234

Query: 903  ------LWKSCWNLDIKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVV 742
                   WK  W L +  K+KHFLW++ HN L+   NL+ +GM  + RC MCG + E   
Sbjct: 235  ESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAG 294

Query: 741  DLFFHCDRAMIIWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELF----QERLQLSVFL 574
             LFF C     +W+ + +        + + +   +    N +  ++     ER    V L
Sbjct: 295  HLFFKCKPVKKVWQALNL-------EELRSMLKQQTSGKNVLQSIYCRPENERTSAIVCL 347

Query: 573  FWWIWKSRNLWVFNKDKWNERDIVKYAIHDWLEFKVLNV----PNSGRIKQSKDPHVVVA 406
            + W WK RN         +  ++    +    EF  +NV    P +G          V  
Sbjct: 348  WQW-WKERNEVREGGIPRSPAELSHLIMSQAGEFVRMNVKEKSPRTGEC-------AVWR 399

Query: 405  EPSLNTFVVGCHSLCISAINDLKLGSSFGGW---LGNEHGKLLKAWTSSRDFIENPMEAI 235
             P LN   +       S +         GGW   + ++ G +L+A      ++++   A 
Sbjct: 400  RPPLNFVKINTDGAYSSNMKQ-------GGWGFVIKDQTGAVLQAGAGPAAYLQDAFHAE 452

Query: 234  LIGMRLALCTASEFGPRKVNVMID 163
            ++    A+ TASE G  ++ +  D
Sbjct: 453  VVACAAAIKTASERGMSRIELETD 476


>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
          Length = 639

 Score =  103 bits (257), Expect = 1e-19
 Identities = 89/326 (27%), Positives = 137/326 (42%), Gaps = 20/326 (6%)
 Frame = -2

Query: 1080 VSLIMQIPINQEGSNDKRVWHWDGKGLFSVKSAYRLLSQTKKLEMDRQESSKGILSVGV- 904
            V+ I  IP++ E   D   WH+D +G F+VKSAY++     + EM+R+ S  G   V   
Sbjct: 181  VAAIKSIPVHVE-MEDVLAWHFDARGCFTVKSAYKV-----QREMERRASRNGCPGVSNW 234

Query: 903  ------LWKSCWNLDIKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVV 742
                   WK  W L +  K+KHFLW++ HN L+   NL  +GM  + RC MCG + E   
Sbjct: 235  ESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAG 294

Query: 741  DLFFHCDRAMIIWKIV------PVCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSV 580
             LFF C     +W+ +       +    TS  +        I C   I     ER    V
Sbjct: 295  HLFFKCKPVKKVWQALNLEELRSMLEQQTSGKNV----LQSIYCRPEI-----ERTSAIV 345

Query: 579  FLFWWIWKSRNLWVFNKDKWNERDIVKYAIHDWLEFKVLNV----PNSGRIKQSKDPHVV 412
             L+ W WK RN         +  ++    +    EF  +NV    P +G          V
Sbjct: 346  CLWQW-WKERNEVREGGIPRSPAELSHLIMSQAGEFVRMNVKEKSPRTGEC-------AV 397

Query: 411  VAEPSLNTFVVGCHSLCISAINDLKLGSSFGGW---LGNEHGKLLKAWTSSRDFIENPME 241
               P LN   +       S +         GGW   + ++ G +L+A      ++++   
Sbjct: 398  WRRPPLNFVKINTDGAYSSNMKQ-------GGWGFVIRDQTGAVLQAGAGPAAYLQDAFH 450

Query: 240  AILIGMRLALCTASEFGPRKVNVMID 163
            A ++    A+ TASE G  ++ +  D
Sbjct: 451  AEVVACAAAIKTASERGMSRIELETD 476


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  103 bits (257), Expect = 1e-19
 Identities = 89/326 (27%), Positives = 137/326 (42%), Gaps = 20/326 (6%)
 Frame = -2

Query: 1080 VSLIMQIPINQEGSNDKRVWHWDGKGLFSVKSAYRLLSQTKKLEMDRQESSKGILSVGV- 904
            V+ I  IP++ E   D   WH+D +G F+VKSAY++     + EM+R+ S  G   V   
Sbjct: 1214 VAAIKSIPVHVE-MEDVLAWHFDARGCFTVKSAYKV-----QREMERRASRNGCPGVSNW 1267

Query: 903  ------LWKSCWNLDIKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVV 742
                   WK  W L +  K+KHFLW++ HN L+   NL  +GM  + RC MCG + E   
Sbjct: 1268 ESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAG 1327

Query: 741  DLFFHCDRAMIIWKIV------PVCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSV 580
             LFF C     +W+ +       +    TS  +        I C   I     ER    V
Sbjct: 1328 HLFFKCKPVKKVWQALNLEELRSMLEQQTSGKNV----LQSIYCRPEI-----ERTSAIV 1378

Query: 579  FLFWWIWKSRNLWVFNKDKWNERDIVKYAIHDWLEFKVLNV----PNSGRIKQSKDPHVV 412
             L+ W WK RN         +  ++    +    EF  +NV    P +G          V
Sbjct: 1379 CLWQW-WKERNEVREGGIPRSPAELSHLIMSQAGEFVRMNVKEKSPRTGEC-------AV 1430

Query: 411  VAEPSLNTFVVGCHSLCISAINDLKLGSSFGGW---LGNEHGKLLKAWTSSRDFIENPME 241
               P LN   +       S +         GGW   + ++ G +L+A      ++++   
Sbjct: 1431 WRRPPLNFVKINTDGAYSSNMKQ-------GGWGFVIRDQTGAVLQAGAGPAAYLQDAFH 1483

Query: 240  AILIGMRLALCTASEFGPRKVNVMID 163
            A ++    A+ TASE G  ++ +  D
Sbjct: 1484 AEVVACAAAIKTASERGMSRIELETD 1509


>ref|XP_004298091.1| PREDICTED: uncharacterized protein LOC101303799 [Fragaria vesca
            subsp. vesca]
          Length = 351

 Score =  102 bits (253), Expect = 4e-19
 Identities = 51/181 (28%), Positives = 96/181 (53%), Gaps = 1/181 (0%)
 Frame = -2

Query: 1086 AGVSLIMQIPINQEGSNDKRVWHWDGKGLFSVKSAYRLLSQTKKLE-MDRQESSKGILSV 910
            A   +I +IP++  G  D+ +WH+D KGL+SV+S Y +  + + +E +    SS+G    
Sbjct: 32   AEAQVIGKIPLSLRGGEDRWMWHFDRKGLYSVRSGYHVARKVEHMETIASSSSSQG--GW 89

Query: 909  GVLWKSCWNLDIKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFF 730
            G +WK  W +++  K++   W++L   L T   L KKG+     CP CG  +E  + +F 
Sbjct: 90   GFIWKKVWKVNVPPKVRMHAWRILKEVLPTKWVLKKKGVDLGVECPFCGGDKEDGLHIFK 149

Query: 729  HCDRAMIIWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSR 550
            +C     +WK   + S  ++HP  ++ +W      + +  +  ++L++ ++  W IW  +
Sbjct: 150  NCGVVNQLWKCSSLTSTPSTHPAMEIKAW----LCDMVELMHVKKLEVFLYTLWAIWVEQ 205

Query: 549  N 547
            N
Sbjct: 206  N 206


>gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Zea mays]
          Length = 472

 Score =  102 bits (253), Expect = 4e-19
 Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 1/211 (0%)
 Frame = -2

Query: 1071 IMQIPINQEGSNDKRVWHWDGKGLFSVKSAYRLLSQTKKLEMDRQESSKGILSVGV-LWK 895
            I+ IPI QEG  D   WH D KG FSVKSAY L S+ +    +  ++S  I   G  +WK
Sbjct: 95   ILAIPI-QEGMEDTLAWHGDPKGNFSVKSAYALASRRRD-HHNNADASSSISGRGENVWK 152

Query: 894  SCWNLDIKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRA 715
            S WN+++ NK+K FLW++ HN     +N+ ++G+  E  CPMC   +E    LF  C + 
Sbjct: 153  SIWNVNVTNKIKMFLWRLAHNSHPVRVNIARRGIKIETLCPMCFRLDEDGGHLFLKCKKV 212

Query: 714  MIIWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSRNLWVF 535
              +W+   +C  +T        S  E+    +I  L +E     V L W  W +RN  + 
Sbjct: 213  KQVWRC--LCLEDTRTLLASKASALEV--IESILTLREETKIKVVLLLWCWWSARNKTIQ 268

Query: 534  NKDKWNERDIVKYAIHDWLEFKVLNVPNSGR 442
             +   +  ++     +  +  + L +  S R
Sbjct: 269  GERCGSTEEVCNTVAYHLMNMEKLQIGKSAR 299


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 99.4 bits (246), Expect = 3e-18
 Identities = 80/318 (25%), Positives = 132/318 (41%), Gaps = 12/318 (3%)
 Frame = -2

Query: 1080 VSLIMQIPINQEGSNDKRVWHWDGKGLFSVKSAYRLLSQTKKLEMDRQESSKGILSVGV- 904
            V+ I  IP++ E   D   WH+D +G F+VKSAY++     + EM+R+ S  G   V   
Sbjct: 1186 VAAIKSIPVHVE-MEDVLAWHFDARGCFTVKSAYKV-----QREMERRASRNGCPGVSNW 1239

Query: 903  ------LWKSCWNLDIKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVV 742
                   WK  W L +  K+KHFLW++ HN L+   NL+ +GM  + RC MCG + E   
Sbjct: 1240 ESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAG 1299

Query: 741  DLFFHCDRAMIIWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELF--QERLQLSVFLFW 568
             LFF C     +W+ + +        + + +   +    N +  ++   E  + S  +  
Sbjct: 1300 HLFFKCKPVKKVWQALNL-------EELRSMLEQQTSGKNVLQSIYCRPENERTSAIVCL 1352

Query: 567  WIWKSRNLWVFNKDKWNERDIVKYAIHDWLEFKVLNVPNSGRIKQSKDPHVVVAEPSLNT 388
            W W            W ER+  K              P +G          V   P LN 
Sbjct: 1353 WQW------------WKERNEEK-------------SPRTGEC-------AVWRRPPLNF 1380

Query: 387  FVVGCHSLCISAINDLKLGSSFGGW---LGNEHGKLLKAWTSSRDFIENPMEAILIGMRL 217
              +       S +         GGW   + ++ G +L+A      ++++   A ++    
Sbjct: 1381 VKINTDGAYSSNMKQ-------GGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAEVVACAA 1433

Query: 216  ALCTASEFGPRKVNVMID 163
            A+ TASE G  ++ +  D
Sbjct: 1434 AIKTASERGMSRIELETD 1451


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score = 99.4 bits (246), Expect = 3e-18
 Identities = 80/318 (25%), Positives = 132/318 (41%), Gaps = 12/318 (3%)
 Frame = -2

Query: 1080 VSLIMQIPINQEGSNDKRVWHWDGKGLFSVKSAYRLLSQTKKLEMDRQESSKGILSVGV- 904
            V+ I  IP++ E   D   WH+D +G F+VKSAY++     + EM+R+ S  G   V   
Sbjct: 1182 VAAIKSIPVHVE-MEDVLAWHFDARGCFTVKSAYKV-----QREMERRASRNGCPGVSNW 1235

Query: 903  ------LWKSCWNLDIKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVV 742
                   WK  W L +  K+KHFLW++ HN L+   NL+ +GM  + RC MCG + E   
Sbjct: 1236 ESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAG 1295

Query: 741  DLFFHCDRAMIIWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELF--QERLQLSVFLFW 568
             LFF C     +W+ + +        + + +   +    N +  ++   E  + S  +  
Sbjct: 1296 HLFFKCKPVKKVWQALNL-------EELRSMLEQQTSGKNVLQSIYCRPENERTSAIVCL 1348

Query: 567  WIWKSRNLWVFNKDKWNERDIVKYAIHDWLEFKVLNVPNSGRIKQSKDPHVVVAEPSLNT 388
            W W            W ER+  K              P +G          V   P LN 
Sbjct: 1349 WQW------------WKERNEEK-------------SPRTGEC-------AVWRRPPLNF 1376

Query: 387  FVVGCHSLCISAINDLKLGSSFGGW---LGNEHGKLLKAWTSSRDFIENPMEAILIGMRL 217
              +       S +         GGW   + ++ G +L+A      ++++   A ++    
Sbjct: 1377 VKINTDGAYSSNMKQ-------GGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAEVVACAA 1429

Query: 216  ALCTASEFGPRKVNVMID 163
            A+ TASE G  ++ +  D
Sbjct: 1430 AIKTASERGMSRIELETD 1447


>ref|XP_004292002.1| PREDICTED: uncharacterized protein LOC101312896 [Fragaria vesca
            subsp. vesca]
          Length = 2277

 Score = 99.0 bits (245), Expect = 4e-18
 Identities = 74/292 (25%), Positives = 130/292 (44%), Gaps = 2/292 (0%)
 Frame = -2

Query: 1080 VSLIMQIPINQEGSNDKRVWHWDGKGLFSVKSAYRLLSQTKKLEMDRQESSKGILSVGVL 901
            V  I  +PI+   ++DK +W  D KGLF VKSAY + ++T+ LE    +    +     L
Sbjct: 1059 VHKIQALPISSRSNSDKWIWAPDRKGLFMVKSAYHI-ARTRVLE----DHVMALNPSAQL 1113

Query: 900  WKSCWNLDIKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCD 721
            W   WN  +  K+K  +WKV  N L +   L ++G+  + +CP C +  ES +     C 
Sbjct: 1114 WNKIWNAPVPGKVKICVWKVASNILPSRSRLSQRGIDIDTQCPFCDEEVESPIHALRDCP 1173

Query: 720  RAMIIWKI--VPVCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSRN 547
             A    ++  VP+   +T+  D      W +    N    F   +     + W +W+++N
Sbjct: 1174 HAAAFIQLVDVPIQLADTNALD------WLVSSLENSPSTFATLM----MIIWSVWRNQN 1223

Query: 546  LWVFNKDKWNERDIVKYAIHDWLEFKVLNVPNSGRIKQSKDPHVVVAEPSLNTFVVGCHS 367
              V+N +     ++V   +  W EFK   V   GR    +D  +    PS     +   +
Sbjct: 1224 DHVWNNNAKQATEVVPLTLRWWEEFKSAFVKRRGRNVSPRDRWIT---PSSGYIKLNVDA 1280

Query: 366  LCISAINDLKLGSSFGGWLGNEHGKLLKAWTSSRDFIENPMEAILIGMRLAL 211
               +A     LG  F    G+  G  ++   S+     + + A+L+G+++A+
Sbjct: 1281 AYNNASCMASLGGVFRDHTGSCLGVFMQGLFSAHSAHHSELMALLVGVQVAI 1332


>gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japonica Group]
          Length = 613

 Score = 98.2 bits (243), Expect = 6e-18
 Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 4/201 (1%)
 Frame = -2

Query: 1080 VSLIMQIPINQEGSNDKRVWHWDGKGLFSVKSAYRLLSQTKKLEMDRQ--ESSKGILSVG 907
            V  I+ IP++  G +D   WH+D +G+FSVKSAY  L   +  +  RQ  ESS G  S  
Sbjct: 229  VKNILAIPVHN-GYSDVAAWHFDPRGIFSVKSAYHTLEYQRDRQAIRQTGESSSGKTSSA 287

Query: 906  VL-WKSCWNLDIKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFF 730
             L W+  W L+   K+KHFLW++ HN L    N+ K+GM  + RCP+C   +E+    FF
Sbjct: 288  ALQWEKLWRLNHLPKVKHFLWRLAHNSLPLRQNISKRGMEIDTRCPVCLRLDENGGHCFF 347

Query: 729  HCDRAMIIWKIVPVCSNNTSHPDFKL-ISWWEI*CSNNIGELFQERLQLSVFLFWWIWKS 553
             C      W+++     N  H   +L +    +    +I  L ++ +  +V L W  W +
Sbjct: 348  KCKFVKPCWRML-----NFEHIRQELSLQTSTLDVCKHILNLREDIMLTTVILLWNWWDA 402

Query: 552  RNLWVFNKDKWNERDIVKYAI 490
            RN     +D+    ++    I
Sbjct: 403  RNKVNAGEDRRTHEEVYSRVI 423


>gb|EAY97143.1| hypothetical protein OsI_19065 [Oryza sativa Indica Group]
          Length = 257

 Score = 98.2 bits (243), Expect = 6e-18
 Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
 Frame = -2

Query: 1071 IMQIPINQEGSNDKRVWHWDGKGLFSVKSAYRLLSQTKKLEMDRQ--ESSKGILSVGVL- 901
            I+ IP+N  GS D   WH+D +G+F+VKSAY  L   ++    RQ  ESS G+     L 
Sbjct: 10   ILAIPLNM-GSEDFAAWHFDPRGIFTVKSAYHTLEDQREHLASRQTGESSSGVARTASLD 68

Query: 900  WKSCWNLDIKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCD 721
            W   W L    K+KHFLW   HN L   +N+ ++GM  + RCP+C    E     FF C 
Sbjct: 69   WGKLWRLHYFPKVKHFLWCFAHNTLPLRMNIDRRGMEIDTRCPVCHRLNEDGGHCFFKCK 128

Query: 720  RAMIIWKIVPVCSNNTSHPDFKLISWWE-I*CSNNIGELFQERLQLSVFLFWWIWKSRN 547
                 W+++     N  H   +L+ +   +    +I  + ++++  +V   W  W +RN
Sbjct: 129  YVKAGWRVM-----NLKHIRLELMQYSSALDVCKHILNMKEDKMLTTVLFLWNWWDARN 182


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 98.2 bits (243), Expect = 6e-18
 Identities = 96/359 (26%), Positives = 150/359 (41%), Gaps = 13/359 (3%)
 Frame = -2

Query: 1041 SNDKRVWHWDGKGLFSVKSAYRLLSQTKKLEMDRQESSKGILSVGVLWKSCWNLDIKNKM 862
            + D+  W +   G +SVKS Y ++++      + QE  +   S+  +++  W LD+  K+
Sbjct: 1006 TRDRFTWEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQP--SLDPIFQQIWKLDVPPKI 1063

Query: 861  KHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAMIIWKIVPVCS 682
             HFLW+ ++NCLS A NL  + +  E  C  C  H E+V  L F C  A + W I P+  
Sbjct: 1064 HHFLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAISPL-- 1121

Query: 681  NNTSHPDFKLISWWEI*CSNNIGELFQERLQ--------LSVFLFWWIWKSRNLWVFNKD 526
                 P      W E    N    L   + Q        L  ++ W +WK+RN  VF   
Sbjct: 1122 -----PAPPGGEWAESLFRNMHHVLSVHKSQPEESDHHALIPWILWRLWKNRNDLVFKGR 1176

Query: 525  KWNERDIVKYAIHDWLEFKVLNVPNSGRIKQSKDPHVVVAEPSLNTFVVGCHSLCISAIN 346
            ++    ++  A  D   +     P       ++D  V    PS     V C++       
Sbjct: 1177 EFTAPQVILKATEDMDAWNNRKEPQPQVTSSTRDRCVKWQPPSHGW--VKCNT---DGAW 1231

Query: 345  DLKLGSSFGGW-LGNEHGKL----LKAWTSSRDFIENPMEAILIGMRLALCTASEFGPRK 181
               LG+   GW L N  G+L    L+A  S +  +E  +EA    +R A+ + S F  R+
Sbjct: 1232 SKDLGNCGVGWVLRNHTGRLLWLGLRALPSQQSVLETEVEA----LRWAVLSLSRFNYRR 1287

Query: 180  VNVMIDDNDIASNLNKRLPFVGNGAKIAEDIFLLCFLFEHVVFLVQDSNCKFVCNRLAR 4
            V    D   + S +   +       +I +DI  L   FE V F         V +R AR
Sbjct: 1288 VIFESDSQYLVSLIQNEMDIPSLAPRI-QDIRNLLRHFEEVKFQFTRREGNNVADRTAR 1345


>ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [Sorghum bicolor]
            gi|241920472|gb|EER93616.1| hypothetical protein
            SORBIDRAFT_01g011130 [Sorghum bicolor]
          Length = 463

 Score = 97.8 bits (242), Expect = 8e-18
 Identities = 83/363 (22%), Positives = 151/363 (41%), Gaps = 7/363 (1%)
 Frame = -2

Query: 1074 LIMQIPINQEGSNDKRVWHWDGKGLFSVKSAYRLLSQTKKLEMDRQE----SSKGILSVG 907
            +I+ +P+ Q G ++   WH+D  G+FSVKSAY++   T       Q     S+ G LS  
Sbjct: 84   VILALPVYQ-GRSNMVAWHYDKHGVFSVKSAYKVARDTYIRNHTSQGQQGGSNPGPLS-- 140

Query: 906  VLWKSCWNLDIKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFH 727
             LWK  W L   NK+KHFLW+ LHN      NL ++GM    RCP+C    E    LFF 
Sbjct: 141  -LWKRVWKLSCPNKIKHFLWRFLHNSHPLRDNLIRRGMEIVPRCPVCNQVGEDGGHLFFK 199

Query: 726  CDRAMIIWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSRN 547
            C  A  +W+++ + +      +F    +  I     I    + R  + +   W+ W  RN
Sbjct: 200  CGMARQVWELLGLSTEREVLANF----YTPIDVVEFILRASESRKLMMIVALWYTWSERN 255

Query: 546  LWVFNKDKWNERDIVKYAIHDWLEFKVLNVPNSGRIKQSKDPHVVVAEPSLNTFVVGCHS 367
              +  +D+      +   +  +++        +      +      ++P ++   + C  
Sbjct: 256  A-IREEDRRRSPQTLARCVELYVQEMRTTETTANPTANQEQQQYKWSKPPVDILKLNCD- 313

Query: 366  LCISAINDLKLGSSFGGWLGNEHGKLLKAWTSSRDFIENPMEAILIGMRLALCTASEFGP 187
                + +      S+G  + +  G ++ +     + +  PM+A LI     +  A+  G 
Sbjct: 314  ---GSFSPETRAGSWGVLIRDHEGDVIMSGRGRVNHLMTPMQAELIACLQGVQLAANLGI 370

Query: 186  RKVNVMIDDNDIASNLNK---RLPFVGNGAKIAEDIFLLCFLFEHVVFLVQDSNCKFVCN 16
             ++ +  D  ++   +         VG   +  + +  L F+    VF  +      +CN
Sbjct: 371  GRLILETDALEVVKAIKTSAYNYAAVGYLVEEIKSLIELNFISVECVFACR------ICN 424

Query: 15   RLA 7
            R A
Sbjct: 425  RAA 427


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X2
            [Citrus sinensis]
          Length = 765

 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 7/190 (3%)
 Frame = -2

Query: 1071 IMQIPINQEGSNDKRVWHWDGKGLFSVKSAYRLLSQTKKLEMDRQESSKGILSVGVLWKS 892
            I++IP+ ++ S D+ +WH+D KG +SVKS Y+L  Q K    +R  SSK        W S
Sbjct: 398  ILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKF--PNRPSSSK---EDNNSWNS 452

Query: 891  CWNLDIKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAM 712
             W L I  K+K F+W+  ++ L T+ NL+K+ +L    C  C  H E++    F C  + 
Sbjct: 453  IWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASR 512

Query: 711  IIWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELF-------QERLQLSVFLFWWIWKS 553
             IWK+       T   + K +      C + +  L        +  ++L V + W IW S
Sbjct: 513  KIWKL------TTFEEEVKALK-----CKDVLSLLLALADRRSKTEMELIVAVCWSIWHS 561

Query: 552  RNLWVFNKDK 523
            RNL++F   K
Sbjct: 562  RNLFIFQNKK 571


>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
            [Citrus sinensis]
          Length = 968

 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 7/190 (3%)
 Frame = -2

Query: 1071 IMQIPINQEGSNDKRVWHWDGKGLFSVKSAYRLLSQTKKLEMDRQESSKGILSVGVLWKS 892
            I++IP+ ++ S D+ +WH+D KG +SVKS Y+L  Q K    +R  SSK        W S
Sbjct: 601  ILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKF--PNRPSSSK---EDNNSWNS 655

Query: 891  CWNLDIKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAM 712
             W L I  K+K F+W+  ++ L T+ NL+K+ +L    C  C  H E++    F C  + 
Sbjct: 656  IWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASR 715

Query: 711  IIWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELF-------QERLQLSVFLFWWIWKS 553
             IWK+       T   + K +      C + +  L        +  ++L V + W IW S
Sbjct: 716  KIWKL------TTFEEEVKALK-----CKDVLSLLLALADRRSKTEMELIVAVCWSIWHS 764

Query: 552  RNLWVFNKDK 523
            RNL++F   K
Sbjct: 765  RNLFIFQNKK 774


>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
          Length = 1452

 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 85/320 (26%), Positives = 136/320 (42%), Gaps = 5/320 (1%)
 Frame = -2

Query: 1080 VSLIMQIPINQEGSNDKRVWHWDGKGLFSVKSAYRL-LSQTKKLEMDRQESSKGILSVGV 904
            +  I++I +      D+ +WH+D KG +SVKS Y+L L+Q    E +   SS        
Sbjct: 1078 IEAILKILLPSGKEEDEVLWHFDKKGEYSVKSGYQLALNQNFPNEPESSNSSSR------ 1131

Query: 903  LWKSCWNLDIKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHC 724
            LWK  W LD+  K+K F+W+ L N L TA NL+K+  L E  C  C    E+V  +   C
Sbjct: 1132 LWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIEC 1191

Query: 723  DRAMIIWKIVP-VCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSRN 547
              A  IW + P +   +  H      +  E+   ++  E      +L +   W IW +RN
Sbjct: 1192 KAARKIWDLAPLIVQPSKDHNQDFFSAIQEMWSRSSTAE-----AELMIVYCWVIWSARN 1246

Query: 546  LWVFNKDKWNERDIVKYAIHDWLEFKVLNVPNSGRIKQSKDPHVVVAE---PSLNTFVVG 376
             ++F   K + R +   A  D +      V   G +  +KD  +   +   PS N   + 
Sbjct: 1247 KFIFEGKKSDSRFLAAKA--DSVLKAYQRVSKPGNVHGAKDRGIDQQKWKPPSQNVLKLN 1304

Query: 375  CHSLCISAINDLKLGSSFGGWLGNEHGKLLKAWTSSRDFIENPMEAILIGMRLALCTASE 196
              +    +  D K+G   G  + +  GK+L        F E    A    +   L  A++
Sbjct: 1305 VDAAV--STKDQKVG--LGAIVRDAEGKILAVGIKQAQFRERVSLAEAEAIHWGLQVANQ 1360

Query: 195  FGPRKVNVMIDDNDIASNLN 136
                 + V  D  ++   LN
Sbjct: 1361 ISSSSLIVESDCKEVVELLN 1380


>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 769

 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 7/190 (3%)
 Frame = -2

Query: 1071 IMQIPINQEGSNDKRVWHWDGKGLFSVKSAYRLLSQTKKLEMDRQESSKGILSVGVLWKS 892
            I++IP+ ++ S D+ +WH+D KG +SVKS Y+L  Q K    +R  SSK        W S
Sbjct: 398  ILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKF--PNRPSSSK---EDNNSWNS 452

Query: 891  CWNLDIKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAM 712
             W L I  K+K F+W+  ++ L T+ NL+K+ +L    C  C  H E++    F C  + 
Sbjct: 453  IWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASR 512

Query: 711  IIWKIVPVCSNNTSHPDFKLISWWEI*CSNNIGELF-------QERLQLSVFLFWWIWKS 553
             IWK+       T   + K +      C + +  L        +  ++L V + W IW S
Sbjct: 513  KIWKL------TTFEEEVKALK-----CKDVLSLLLALADRRSKTEMELIVAVCWSIWHS 561

Query: 552  RNLWVFNKDK 523
            RNL++F   K
Sbjct: 562  RNLFIFQNKK 571


>gb|EEE65549.1| hypothetical protein OsJ_21022 [Oryza sativa Japonica Group]
          Length = 233

 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 3/170 (1%)
 Frame = -2

Query: 1047 EGSNDKRVWHWDGKGLFSVKSAYRLLSQTKKLEMDRQESSKG---ILSVGVLWKSCWNLD 877
            EG  D   WH+D KG+FSVKSAY++  Q K     ++ SS G      V   WK  W+  
Sbjct: 36   EGHEDWAAWHYDQKGVFSVKSAYKVAIQNKDARSGKEASSSGGGDCTGVNFNWKKIWDCK 95

Query: 876  IKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVVDLFFHCDRAMIIWKI 697
            + NK+K FLW+  HN L+   NL + G+  +  CP+C   +E+   LFF+C      W++
Sbjct: 96   VANKVKLFLWRFAHNSLALRCNLSRMGVKLDTICPVCKRLDENSCHLFFNCKGVNNYWQM 155

Query: 696  VPVCSNNTSHPDFKLISWWEI*CSNNIGELFQERLQLSVFLFWWIWKSRN 547
            + +          K  S  E+   N I +  +E+    + L W  W ++N
Sbjct: 156  LNLEEERVLLG--KCRSGQEV--LNKIWDFVEEKRLKVITLLWKWWSAQN 201


>gb|EEE57938.1| hypothetical protein OsJ_08648 [Oryza sativa Japonica Group]
          Length = 521

 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 51/134 (38%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
 Frame = -2

Query: 1080 VSLIMQIPINQEGSNDKRVWHWDGKGLFSVKSAYRLLSQTKKLEMDRQESSKGILSVGV- 904
            V+ I  IP++ E   D   WH+D +G FSVKSAY++     + EM+R+ S  G   V   
Sbjct: 93   VAAIKSIPVHVE-MEDVLAWHFDARGCFSVKSAYKV-----QREMERRASRNGCPGVSNG 146

Query: 903  ------LWKSCWNLDIKNKMKHFLWKVLHNCLSTALNLYKKGMLAEFRCPMCGDHEESVV 742
                   WK  W L +  K+KHFLW++ HN L+   NL+ +GM  + RC MCG + E   
Sbjct: 147  ESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGQYNEDAG 206

Query: 741  DLFFHCDRAMIIWK 700
             L F C      WK
Sbjct: 207  HLLFKCKPVKKWWK 220