BLASTX nr result
ID: Rehmannia22_contig00019683
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00019683
(1310 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006485550.1| PREDICTED: uncharacterized protein LOC102627... 142 8e-67
ref|XP_006469773.1| PREDICTED: uncharacterized protein LOC102616... 174 2e-61
gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus pe... 125 9e-59
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera] 115 1e-56
gb|EMJ04900.1| hypothetical protein PRUPE_ppa020995mg, partial [... 136 5e-55
ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786... 99 1e-53
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 81 1e-51
gb|AAP54617.2| retrotransposon protein, putative, unclassified [... 81 1e-51
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 103 7e-50
ref|XP_006655090.1| PREDICTED: uncharacterized protein LOC102699... 122 1e-48
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 96 2e-48
gb|EMJ25879.1| hypothetical protein PRUPE_ppa025799mg [Prunus pe... 81 2e-48
gb|EMJ25392.1| hypothetical protein PRUPE_ppa017155mg, partial [... 144 9e-47
gb|AAX95129.1| retrotransposon protein, putative, unclassified [... 92 2e-46
gb|ABA91837.2| retrotransposon protein, putative, unclassified [... 92 2e-46
gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japo... 92 2e-46
ref|NP_001057661.2| Os06g0484800 [Oryza sativa Japonica Group] g... 85 7e-46
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 113 7e-44
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 120 5e-41
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 119 7e-41
>ref|XP_006485550.1| PREDICTED: uncharacterized protein LOC102627687 [Citrus sinensis]
Length = 473
Score = 142 bits (359), Expect(2) = 8e-67
Identities = 67/150 (44%), Positives = 93/150 (62%)
Frame = +1
Query: 1 PSWILTGF*MAIGDCGLVDLGMIGYQFTWERGRDTENWVEKRLDRGLANHSWLANLPNDK 180
P+W L GF + D GL DLGM GYQFTWE + +NW+E+RLD GLA+ +W+ P K
Sbjct: 155 PNWKLQGFKDVVSDLGLHDLGMEGYQFTWEMSKGNKNWLEERLDHGLASINWIRLFPQAK 214
Query: 181 VWNLESLMSDHSPIFLELGKQYRVKRVRKFRFENV*LREKDCKEIVVNGWNKGCETILTG 360
V +L++ SDH IF + RV+KFRFEN+ L E DC+ IV + W +
Sbjct: 215 VSSLKASCSDHLHIFFDPNPLVYQSRVKKFRFENLWLCEPDCQPIVQDSWASSGNVSIQS 274
Query: 361 KIETCGAELFKWGNILRNSFHERIKDTKKK 450
KI CG++L +WG+ L FH+RI+D K++
Sbjct: 275 KINACGSDLLRWGSYLSRDFHKRIRDCKQR 304
Score = 139 bits (351), Expect(2) = 8e-67
Identities = 67/148 (45%), Positives = 96/148 (64%)
Frame = +3
Query: 444 KKMSEFRGGRDPHSVAEFEGARNQYNLLLAQQEDFWKQRAKLFWLKGGDANSRYFHTVAS 623
+++ RG RD S+ +F ARN+YN LL E FWKQR+K WLK GD N RYFH +AS
Sbjct: 303 QRIGVLRGLRDVVSLGDFTEARNRYNELLHSHEIFWKQRSKSLWLKEGDLNPRYFHAMAS 362
Query: 624 PRKRHNTIT*LKDSNGLWLNWENGLGQHIVNHFVEIFTSSGCVCDPIMECVAARVSAAQN 803
RKR N I L++S G W + + I ++F +IF+S G CD +++CV ++ A QN
Sbjct: 363 TRKRQNMIGKLRNSKGQWCTDPAEINELIGDYFTKIFSSEGGSCDEVIQCVEKKLMAGQN 422
Query: 804 EDLLAPFSELEIKEALFSMDPDKSPGPD 887
L+ PF+ ++++A+FSM PDKSP P+
Sbjct: 423 HSLMEPFTTADVRDAIFSMYPDKSPVPN 450
>ref|XP_006469773.1| PREDICTED: uncharacterized protein LOC102616843 [Citrus sinensis]
Length = 977
Score = 174 bits (441), Expect(2) = 2e-61
Identities = 88/194 (45%), Positives = 114/194 (58%)
Frame = +3
Query: 450 MSEFRGGRDPHSVAEFEGARNQYNLLLAQQEDFWKQRAKLFWLKGGDANSRYFHTVASPR 629
M+ RG RD V F AR +YN LL E FWKQRAK WLK G+ N+ YFH AS R
Sbjct: 289 MATLRGRRDSEGVVAFSEARQRYNELLHSHEVFWKQRAKSLWLKEGNRNTHYFHASASAR 348
Query: 630 KRHNTIT*LKDSNGLWLNWENGLGQHIVNHFVEIFTSSGCVCDPIMECVAARVSAAQNED 809
+R N+ L+++ G W + + IV++F +FTS C + +CV R++ N
Sbjct: 349 RRQNSFDSLRNNQGDWCSNPEEVDALIVDYFQGLFTSGRCHTAEVTQCVDTRITNEHNAM 408
Query: 810 LLAPFSELEIKEALFSMDPDKSPGPDRMNPAFFQKFWDVTXXXXXXXXXXXXXXXXXPVG 989
LLAPFS++E+KEALF M +KSPGPD MNP F+QKFW + PVG
Sbjct: 409 LLAPFSDIEVKEALFEMHLEKSPGPDGMNPTFYQKFWHIVGKDVISACLKFIHDCSFPVG 468
Query: 990 FNDTNIVLIPKKEQ 1031
NDT+IVLIPKK +
Sbjct: 469 LNDTSIVLIPKKHK 482
Score = 90.5 bits (223), Expect(2) = 2e-61
Identities = 47/74 (63%), Positives = 57/74 (77%)
Frame = +1
Query: 1021 KKNNLEVVSDLRPIALCNVAYKIISKALANRLKKVLPEVISDSQSAFVPKRLISDNIMIV 1200
KK+ E++SD RPIALCNV YKIISK LANR+K VL VISDSQSAF+P R I+DNI+I
Sbjct: 479 KKHKPELLSDTRPIALCNVLYKIISKMLANRMKSVLDVVISDSQSAFIPGRAITDNIIIS 538
Query: 1201 LRLIIFLKEKDREK 1242
++ FLK K + K
Sbjct: 539 AEIMHFLKRKRQGK 552
Score = 71.6 bits (174), Expect = 7e-10
Identities = 34/73 (46%), Positives = 42/73 (57%)
Frame = +1
Query: 88 ERGRDTENWVEKRLDRGLANHSWLANLPNDKVWNLESLMSDHSPIFLELGKQYRVKRVRK 267
ER R T WVE+RLDR A W+ KV+NL+S SDH P+ L+ + R +
Sbjct: 196 ERARGTNKWVEERLDRAFAYEEWIQRFNKVKVYNLDSSCSDHLPVLLDPSPTQPISRHNR 255
Query: 268 FRFENV*LREKDC 306
FRFEN LRE DC
Sbjct: 256 FRFENSWLREADC 268
Score = 65.1 bits (157), Expect = 6e-08
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +3
Query: 1203 EINHFLKRKRQGKNGVAALKIDMSKAYDRIEWAYLK 1310
EI HFLKRKRQGKNGVAALKIDMSKAY RIEW +L+
Sbjct: 540 EIMHFLKRKRQGKNGVAALKIDMSKAYYRIEWNFLQ 575
>gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus persica]
Length = 1011
Score = 125 bits (314), Expect(3) = 9e-59
Identities = 62/150 (41%), Positives = 94/150 (62%), Gaps = 1/150 (0%)
Frame = +3
Query: 480 HSVAEFEGARNQYNLLLAQQEDFWKQRAKLFWLKGGDANSRYFHTVASPRKRHNTIT*LK 659
+ V+ + +Q + LL+++E FWKQR+K+ WLK GD N+R+FH AS RK+ N + L+
Sbjct: 244 YQVSTYHLLMSQLDSLLSREEAFWKQRSKVSWLKEGDRNTRFFHQRASNRKQRNYVKGLR 303
Query: 660 DSNGLWLNWENGLGQHIVNHFVEIFTSSGCVCD-PIMECVAARVSAAQNEDLLAPFSELE 836
D+ G W E GL ++++F +FTSS + ++ V +RV+ N LL + + E
Sbjct: 304 DNTGRWREDEQGLQYVVLDYFTHLFTSSASGSEGESIDAVESRVTPDMNNLLLTDYCDAE 363
Query: 837 IKEALFSMDPDKSPGPDRMNPAFFQKFWDV 926
I EA+F M P K+PGPD M P FFQK+W +
Sbjct: 364 IHEAVFQMYPTKAPGPDGMPPIFFQKYWHI 393
Score = 77.4 bits (189), Expect(3) = 9e-59
Identities = 45/115 (39%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = +1
Query: 31 AIGDCGLVDLGMIGYQFTWERGRDTENWVEKRLDRGLANHSWLANLPNDKVWNLESLMSD 210
AI DC L D+G G FTW R+ +++RLDR LAN W + P V +LE SD
Sbjct: 136 AISDCHLDDMGFEGATFTWFSTRN--GGIKERLDRVLANCEWRSLFPQATVHHLEPCSSD 193
Query: 211 HSPIFLELGKQYRVKRVRK-FRFENV*LREKDCKEIVVNGWNKGCETILTGKIET 372
H PI LE + R R FRFE++ + +DC+ I+ N WN L ++ T
Sbjct: 194 HLPILLEASPTMKPWRRRSFFRFESMWTQHEDCESIIANAWNTSFTGTLMYQVST 248
Score = 73.9 bits (180), Expect(3) = 9e-59
Identities = 36/67 (53%), Positives = 50/67 (74%)
Frame = +1
Query: 1042 VSDLRPIALCNVAYKIISKALANRLKKVLPEVISDSQSAFVPKRLISDNIMIVLRLIIFL 1221
+S LRPI+LCNV +KI +K LANRLK +L ++IS SQSAF+ RLISDN ++ +I +L
Sbjct: 404 MSQLRPISLCNVLFKIATKVLANRLKLILHKIISPSQSAFISGRLISDNTILAAEIIHYL 463
Query: 1222 KEKDREK 1242
+ + R K
Sbjct: 464 RRRRRGK 470
>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
Length = 1793
Score = 115 bits (287), Expect(3) = 1e-56
Identities = 61/166 (36%), Positives = 86/166 (51%)
Frame = +3
Query: 534 QQEDFWKQRAKLFWLKGGDANSRYFHTVASPRKRHNTIT*LKDSNGLWLNWENGLGQHIV 713
Q E++WKQRAKLFWL GD+NSR FH AS + N I L+ +G +NG Q +V
Sbjct: 899 QIEEYWKQRAKLFWLXXGDSNSRAFHLAASKXRSRNXIANLRGEDGQMYGVDNGAKQIVV 958
Query: 714 NHFVEIFTSSGCVCDPIMECVAARVSAAQNEDLLAPFSELEIKEALFSMDPDKSPGPDRM 893
++F ++F S GC + ++ +S QNE L PF+ ++SPG D
Sbjct: 959 DYFEQLFRSXGCDISDVQSLISPVISXEQNESLXRPFA------------VEESPGDDGF 1006
Query: 894 NPAFFQKFWDVTXXXXXXXXXXXXXXXXXPVGFNDTNIVLIPKKEQ 1031
+P F+Q+ W++ P N TNIVLIPKK +
Sbjct: 1007 SPXFYQRHWEIVGEXVANACIGWLNDGMFPDSLNRTNIVLIPKKSE 1052
Score = 82.0 bits (201), Expect(3) = 1e-56
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +1
Query: 1021 KKNNLEVVSDLRPIALCNVAYKIISKALANRLKKVLPEVISDSQSAFVPKRLISDNIMIV 1200
KK+ + ++DLRPI+LCNV +KI SK LANRLKKVL V+S++QSAFVP R I+D+I+I
Sbjct: 1049 KKSEVISMTDLRPISLCNVIFKIASKLLANRLKKVLDXVVSEAQSAFVPXRSITDSILIA 1108
Query: 1201 LRLIIFLKEK 1230
++ FLK K
Sbjct: 1109 HEVLHFLKRK 1118
Score = 72.8 bits (177), Expect(3) = 1e-56
Identities = 45/150 (30%), Positives = 64/150 (42%)
Frame = +1
Query: 1 PSWILTGF*MAIGDCGLVDLGMIGYQFTWERGRDTENWVEKRLDRGLANHSWLANLPNDK 180
P ++ F A+ DCGL DLG +GY +TWERGR T WVE+R K
Sbjct: 787 PGSLIEAFRQAVTDCGLSDLGYVGYAYTWERGRGTTRWVEER-----------------K 829
Query: 181 VWNLESLMSDHSPIFLELGKQYRVKRVRKFRFENV*LREKDCKEIVVNGWNKGCETILTG 360
+ +SL R+F++EN E E+V W ++
Sbjct: 830 FVSRQSL--------------------RRFKYENSWSLEPQYAEVVRQSWGSNGDSDXMS 869
Query: 361 KIETCGAELFKWGNILRNSFHERIKDTKKK 450
K+ C +L WG LR + RIK+ K +
Sbjct: 870 KLVRCSKDLEDWGKRLRLKWKSRIKELKNQ 899
>gb|EMJ04900.1| hypothetical protein PRUPE_ppa020995mg, partial [Prunus persica]
Length = 1367
Score = 136 bits (342), Expect(3) = 5e-55
Identities = 73/195 (37%), Positives = 106/195 (54%), Gaps = 2/195 (1%)
Frame = +3
Query: 444 KKMSEFRGGRDPHSVAEFEGA-RNQYNLLLAQQEDFWKQRAKLFWLKGGDANSRYFHTVA 620
+K+ E H E Q + L+A+ E +W+QR++ WLK GD NS++FH A
Sbjct: 574 EKLGELLDAPPSHHTVELRNVLTKQLDSLMAKNEVYWRQRSRATWLKAGDRNSKFFHYKA 633
Query: 621 SPRKRHNTIT*LKDSNGLWLNWENGLGQHIVNHFVEIFTSSG-CVCDPIMECVAARVSAA 797
S R+R NTI+ L+D +G W E GL Q +VN+F +F+S+G +++ V RV+
Sbjct: 634 SSRRRRNTISALEDEHGHWQTTEQGLTQTVVNYFQHLFSSTGSSEYTGVVDGVRGRVTEE 693
Query: 798 QNEDLLAPFSELEIKEALFSMDPDKSPGPDRMNPAFFQKFWDVTXXXXXXXXXXXXXXXX 977
N+ LLA F+ EIK ALF M P K+PGPD +P F+QK+W +
Sbjct: 694 MNQTLLAEFTPEEIKIALFQMHPSKAPGPDGFSPFFYQKYWQIVGEDVVAAVLHFFKTGK 753
Query: 978 XPVGFNDTNIVLIPK 1022
N T++ LIPK
Sbjct: 754 LLKKINFTHVALIPK 768
Score = 64.3 bits (155), Expect(3) = 5e-55
Identities = 33/61 (54%), Positives = 44/61 (72%)
Frame = +1
Query: 1051 LRPIALCNVAYKIISKALANRLKKVLPEVISDSQSAFVPKRLISDNIMIVLRLIIFLKEK 1230
LR I+L NV YKI +K LA RLK +LP +ISD+QSAFVP R ISDN ++ L+ + +K
Sbjct: 778 LRLISLFNVLYKIGAKVLATRLKAILPTLISDTQSAFVPGRAISDNSIVAFELLHMMHKK 837
Query: 1231 D 1233
+
Sbjct: 838 N 838
Score = 63.5 bits (153), Expect(3) = 5e-55
Identities = 43/150 (28%), Positives = 63/150 (42%), Gaps = 4/150 (2%)
Frame = +1
Query: 13 LTGF*MAIGDCGLVDLGMIGYQFTWERGRDTENWVEKRLDRGLANHSWLANLPNDKVWNL 192
+ GF AI CG DLG G ++TW R E + RLDR LA W + KV +L
Sbjct: 440 MLGFRQAIDTCGFKDLGYTGPKYTWWRNNPME--IRIRLDRALATADWCSRFLGTKVIHL 497
Query: 193 ESLMSDHSPIFLELGKQYRVKRVRKFRFENV*LREKDCKEIVVNGWNK----GCETILTG 360
SDH P+ + FRFE + +C + + +GW + T
Sbjct: 498 NPTKSDHLPL------------KKLFRFEEMWAEHVNCMQTIQDGWQRTSRGSAPFTTTE 545
Query: 361 KIETCGAELFKWGNILRNSFHERIKDTKKK 450
K++ +L W +IK T++K
Sbjct: 546 KLKCTCHQLLGWSKCNFGHLPNQIKITQEK 575
>ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786154 [Setaria italica]
Length = 720
Score = 98.6 bits (244), Expect(3) = 1e-53
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
Frame = +3
Query: 462 RGGRDPHSVAEFEGARNQYNLLLAQQEDFWKQRAKLFWLKGGDANSRYFHTVASPRKRHN 641
RG + S+ E + ++ L Q++ +W+QRAK W+ GD N+ +FH AS R++ +
Sbjct: 316 RGPINEQSLRRMELLKFRWERLEEQKDLYWRQRAKAHWVSKGDRNTHFFHQYASERRKRS 375
Query: 642 TIT*LKDSNGLWLNWENGLGQHIVNHFVEIF-TSSGCVCDPIMECVAARVSAAQNEDLLA 818
I L +G + + L I N++ +F T++G D +++ V VS N+ LL
Sbjct: 376 RIKRLVQDDGRVVEEDGELETLITNYYRNLFTTNAGDRMDELLQHVKQVVSNEMNDQLLR 435
Query: 819 PFSELEIKEALFSMDPDKSPGPDRMNPAFFQKFWDVTXXXXXXXXXXXXXXXXXPVGFND 998
F+E E+++ L ++ K+PG D M+ F++K W++ P +N+
Sbjct: 436 DFTEEEVRQGLDAIGDLKAPGADGMSSLFYKKHWNIVGADVVREVLNFLNDGSMPAKWNE 495
Query: 999 TNIVLIPK 1022
T +VLIPK
Sbjct: 496 TVVVLIPK 503
Score = 87.4 bits (215), Expect(3) = 1e-53
Identities = 44/76 (57%), Positives = 56/76 (73%)
Frame = +1
Query: 1003 ILFLSLKKNNLEVVSDLRPIALCNVAYKIISKALANRLKKVLPEVISDSQSAFVPKRLIS 1182
++ L K N E + DLRPI+LCNV YKI SK L+NRLK +LPE+IS +QSAFVP RLIS
Sbjct: 497 VVVLIPKVQNPERLKDLRPISLCNVIYKITSKVLSNRLKLILPEIISQNQSAFVPGRLIS 556
Query: 1183 DNIMIVLRLIIFLKEK 1230
DNI+I + +L+ K
Sbjct: 557 DNILIAYEMTHYLQNK 572
Score = 73.9 bits (180), Expect(3) = 1e-53
Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Frame = +1
Query: 22 F*MAIGDCGLVDLGMIGYQFTW-ERGRDTENWVEKRLDRGLANHSWLANLPNDKVWNLES 198
F A+ DC L DLG G FTW ++ +V +RLDR +AN W A+ P KV N E
Sbjct: 161 FRSALEDCELSDLGFAGDLFTWWNNSHNSNEYVRERLDRAVANEEWRAHFPLYKVINGEP 220
Query: 199 LMSDHSPIFLELGKQYRVKRVR---KFRFENV*LREKDCKEIVVNGWNKGCETILTGK-- 363
SDH P+ + + R FRFE + E+ C IV N W +T++ G+
Sbjct: 221 RHSDHRPVVVLTEEDVHSGARRGGQSFRFEAHWVEEEQCAPIVENAW----KTVMEGRRG 276
Query: 364 -----IETCGAELFKWGNILRNSFHERIKDTKK 447
+++ +L W + +R+K +K
Sbjct: 277 TVMEAVQSVATDLGDWNRNVLGDLEKRMKQLRK 309
>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 1382
Score = 81.3 bits (199), Expect(4) = 1e-51
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Frame = +3
Query: 525 LLAQQEDFWKQRAKLFWLKGGDANSRYFHTVASPRKRHNTIT*LKDSNGLWLNWENGLGQ 704
L ++E +QR+++ WL+ GD N+ +FH AS R+R N I L +G + G+ +
Sbjct: 344 LFEKEEIMARQRSRVDWLREGDRNTAFFHARASARRRTNRIKELVRDDGSRCISQEGIKR 403
Query: 705 HIVNHFVEIFTSSGC-VCDPIMECVAARVSAAQNEDLLAPFSELEIKEALFSMDPDKSPG 881
+ +F+S C + +++ + +V N +L ++ EIK ALF M K+PG
Sbjct: 404 MAEVFYENLFSSEPCDSMEEVLDAIPNKVGDFINGELGKQYTNEEIKTALFQMGSTKAPG 463
Query: 882 PDRMNPAFFQKFWDVTXXXXXXXXXXXXXXXXXPVGFNDTNIVLIPK 1022
PD F+Q W + P G D+ +VLIPK
Sbjct: 464 PDGFPALFYQTHWGILEEHICNAVRGFLLGEEIPEGLCDSVVVLIPK 510
Score = 75.1 bits (183), Expect(4) = 1e-51
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = +1
Query: 1003 ILFLSLKKNNLEVVSDLRPIALCNVAYKIISKALANRLKKVLPEVISDSQSAFVPKRLIS 1182
++ L K NN +S RPI+LCNV YKI SK LANRLK LP+++S+ QSAFVP RLI+
Sbjct: 504 VVVLIPKVNNASHLSKFRPISLCNVLYKIASKVLANRLKPFLPDIVSEFQSAFVPGRLIT 563
Query: 1183 DNIMIVLRLIIFLKEK 1230
D+ ++ + ++++
Sbjct: 564 DSALVAYECLHTIRKQ 579
Score = 72.0 bits (175), Expect(4) = 1e-51
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Frame = +1
Query: 22 F*MAIGDCGLVDLGMIGYQFTWERGRDTENWVEKRLDRGLANHSWLANLPNDKVWNLESL 201
F + DCGL+DLG +G +FTW +D + + RLDR +AN + + V N+ +
Sbjct: 166 FRSCLDDCGLIDLGFVGPKFTWSNKQDANSNSKVRLDRAVANGEFSRYFEDCLVENVITT 225
Query: 202 MSDHSPIFLELGK----QYRVKRVRKFRFENV*LREKDCKEIVVNGW---NKGCETI--L 354
SDH I ++L + Q R+ + FRFE LR +D +E+V N W + GC + +
Sbjct: 226 SSDHYAISIDLSRRNHGQRRIPIQQGFRFEAAWLRAEDYREVVENSWRISSAGCVGLRGV 285
Query: 355 TGKIETCGAELFKWGNILRNSFHERIKDTKKK 450
++ L W S +I ++K
Sbjct: 286 WSVLQQVAVSLKDWSKASFGSVRRKILKMERK 317
Score = 45.1 bits (105), Expect(4) = 1e-51
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +3
Query: 1224 RKRQGKNGVAALKIDMSKAYDRIEWAYL 1307
RK+ KN ALKIDM KAYDR+EWAYL
Sbjct: 577 RKQHNKNPFFALKIDMMKAYDRVEWAYL 604
>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
protein OsJ_32156 [Oryza sativa Japonica Group]
Length = 1339
Score = 81.3 bits (199), Expect(4) = 1e-51
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Frame = +3
Query: 525 LLAQQEDFWKQRAKLFWLKGGDANSRYFHTVASPRKRHNTIT*LKDSNGLWLNWENGLGQ 704
L ++E +QR+++ WL+ GD N+ +FH AS R+R N I L +G + G+ +
Sbjct: 301 LFEKEEIMARQRSRVDWLREGDRNTAFFHARASARRRTNRIKELVRDDGSRCISQEGIKR 360
Query: 705 HIVNHFVEIFTSSGC-VCDPIMECVAARVSAAQNEDLLAPFSELEIKEALFSMDPDKSPG 881
+ +F+S C + +++ + +V N +L ++ EIK ALF M K+PG
Sbjct: 361 MAEVFYENLFSSEPCDSMEEVLDAIPNKVGDFINGELGKQYTNEEIKTALFQMGSTKAPG 420
Query: 882 PDRMNPAFFQKFWDVTXXXXXXXXXXXXXXXXXPVGFNDTNIVLIPK 1022
PD F+Q W + P G D+ +VLIPK
Sbjct: 421 PDGFPALFYQTHWGILEEHICNAVRGFLLGEEIPEGLCDSVVVLIPK 467
Score = 75.1 bits (183), Expect(4) = 1e-51
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = +1
Query: 1003 ILFLSLKKNNLEVVSDLRPIALCNVAYKIISKALANRLKKVLPEVISDSQSAFVPKRLIS 1182
++ L K NN +S RPI+LCNV YKI SK LANRLK LP+++S+ QSAFVP RLI+
Sbjct: 461 VVVLIPKVNNASHLSKFRPISLCNVLYKIASKVLANRLKPFLPDIVSEFQSAFVPGRLIT 520
Query: 1183 DNIMIVLRLIIFLKEK 1230
D+ ++ + ++++
Sbjct: 521 DSALVAYECLHTIRKQ 536
Score = 72.0 bits (175), Expect(4) = 1e-51
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Frame = +1
Query: 22 F*MAIGDCGLVDLGMIGYQFTWERGRDTENWVEKRLDRGLANHSWLANLPNDKVWNLESL 201
F + DCGL+DLG +G +FTW +D + + RLDR +AN + + V N+ +
Sbjct: 123 FRSCLDDCGLIDLGFVGPKFTWSNKQDANSNSKVRLDRAVANGEFSRYFEDCLVENVITT 182
Query: 202 MSDHSPIFLELGK----QYRVKRVRKFRFENV*LREKDCKEIVVNGW---NKGCETI--L 354
SDH I ++L + Q R+ + FRFE LR +D +E+V N W + GC + +
Sbjct: 183 SSDHYAISIDLSRRNHGQRRIPIQQGFRFEAAWLRAEDYREVVENSWRISSAGCVGLRGV 242
Query: 355 TGKIETCGAELFKWGNILRNSFHERIKDTKKK 450
++ L W S +I ++K
Sbjct: 243 WSVLQQVAVSLKDWSKASFGSVRRKILKMERK 274
Score = 45.1 bits (105), Expect(4) = 1e-51
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +3
Query: 1224 RKRQGKNGVAALKIDMSKAYDRIEWAYL 1307
RK+ KN ALKIDM KAYDR+EWAYL
Sbjct: 534 RKQHNKNPFFALKIDMMKAYDRVEWAYL 561
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 103 bits (256), Expect(3) = 7e-50
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
Frame = +3
Query: 537 QEDFWKQRAKLFWLKGGDANSRYFHTVASPRKRHNTIT*LKDSNGLWLNWENGLGQHIVN 716
+E FWKQR+++ WL GD N+ YFH V R+ N +T ++D NG+ + E+ + Q I
Sbjct: 227 EEQFWKQRSRVLWLHSGDRNTGYFHAVTRNRRTQNRLTVMEDINGVAQHEEHQISQIISG 286
Query: 717 HFVEIFTS-SGCVCDPIMECVAARVSAAQNEDLLAPFSELEIKEALFSMDPDKSPGPDRM 893
+F +IFTS S + E + VS N+ L ++ E+K+A+FS++ K+PGPD
Sbjct: 287 YFQQIFTSESDGDFSVVDEAIEPMVSQGDNDFLTRIPNDEEVKDAVFSINASKAPGPDGF 346
Query: 894 NPAFFQKFWDVTXXXXXXXXXXXXXXXXXPVGFNDTNIVLIPK 1022
F+ +W + P N+T+I LIPK
Sbjct: 347 TAGFYHSYWHIISTDVGREIRLFFTSKNFPRRMNETHIRLIPK 389
Score = 75.9 bits (185), Expect(3) = 7e-50
Identities = 33/67 (49%), Positives = 52/67 (77%)
Frame = +1
Query: 1042 VSDLRPIALCNVAYKIISKALANRLKKVLPEVISDSQSAFVPKRLISDNIMIVLRLIIFL 1221
V+D RPIALCN+ YKI++K + R++ +LP++IS++QSAFVP R+ISDN++I ++ FL
Sbjct: 396 VADYRPIALCNIFYKIVAKIMTKRMQLILPKLISENQSAFVPGRVISDNVLITHEVLHFL 455
Query: 1222 KEKDREK 1242
+ +K
Sbjct: 456 RTSSAKK 462
Score = 67.8 bits (164), Expect(3) = 7e-50
Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 2/136 (1%)
Frame = +1
Query: 46 GLVDLGMIGYQFTWERGRDTENWVEKRLDRGLANHSWLANLPNDKVWNLESLMSDHSPIF 225
GL DL G F+W RG + +V +RLDR ++N+SWL + P+ + L SDH P+
Sbjct: 66 GLWDLKYSGNPFSW-RGMRYDWFVRQRLDRAMSNNSWLESFPSGRSEYLRFEGSDHRPLV 124
Query: 226 LELGKQYRVKRVRKFRFENV*LREKD-CKEIVVNGW-NKGCETILTGKIETCGAELFKWG 399
+ + + RVKR +FRF+N LR+ D ++ W N G ++LT K+ C E+ W
Sbjct: 125 VFV-DEARVKRRGQFRFDNR-LRDNDVVNALIQETWTNAGDASVLT-KMNQCRREIINWT 181
Query: 400 NILRNSFHERIKDTKK 447
+ + E I+ T+K
Sbjct: 182 RLQNLNSAELIEKTQK 197
>ref|XP_006655090.1| PREDICTED: uncharacterized protein LOC102699406 [Oryza brachyantha]
Length = 1170
Score = 122 bits (305), Expect(3) = 1e-48
Identities = 69/195 (35%), Positives = 109/195 (55%), Gaps = 5/195 (2%)
Frame = +3
Query: 453 SEFRGGRDPHSVAEFEGARN---QYNLLLAQQEDFWKQRAKLFWLKGGDANSRYFHTVAS 623
S + G D ++A+F+ R + LL+++E +QR+++ WLK GD N+++F A
Sbjct: 236 SSWGTGEDVRTLAQFQSERKLMARLAELLSREETMERQRSRINWLKDGDRNTKFFQAFAR 295
Query: 624 PRKRHNTIT*LKDSNGLWLNWENGLGQHIVNHFVEIFTSSGCVCDP--IMECVAARVSAA 797
R R N IT L+ S+GL ++ + + +V+ + ++F S+ C +P +++ V ARV+
Sbjct: 296 ERSRVNKITGLRTSDGLLATAQSEMERLVVSFYKDLF-SAQCNSEPDEVLQHVKARVTDG 354
Query: 798 QNEDLLAPFSELEIKEALFSMDPDKSPGPDRMNPAFFQKFWDVTXXXXXXXXXXXXXXXX 977
NE LL PFS E+K+ALF M P+KSPGPD F+Q W+V
Sbjct: 355 MNEQLLKPFSGEEVKKALFLMGPNKSPGPDGFTAGFYQHHWEVIGPSLTRSVLDFMNGAT 414
Query: 978 XPVGFNDTNIVLIPK 1022
P G N T ++LIPK
Sbjct: 415 VPDGLNQTTVILIPK 429
Score = 63.9 bits (154), Expect(3) = 1e-48
Identities = 31/59 (52%), Positives = 42/59 (71%)
Frame = +1
Query: 1021 KKNNLEVVSDLRPIALCNVAYKIISKALANRLKKVLPEVISDSQSAFVPKRLISDNIMI 1197
K N + + RPI+ CNV YKI SK +ANR K +L EVIS+ QSAFV R+I+DN+++
Sbjct: 429 KVKNPQDIKLFRPISRCNVLYKICSKVIANRSKLLLEEVISEEQSAFVSGRIIADNVLV 487
Score = 57.0 bits (136), Expect(3) = 1e-48
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = +1
Query: 13 LTGF*MAIGDCGLVDLGMIGYQFTWERGRDTENWVEKRLDRGLANHSWLANLPNDKVWNL 192
+ GF + CG DLG +G +TW+ + + ++ RLDR L S+L + V ++
Sbjct: 131 MDGFRDVVVVCGFHDLGYVGLPYTWDNRQKGDKNIKVRLDRALMTSSFLDMFADVFVRHI 190
Query: 193 ESLMSDHSPIFLELGKQYRVKRV--RKFRFENV*LREKDCKEIVVNGWNKG 339
+++ SDH + ++ Q R + + F++EN+ R+ K+ V + W G
Sbjct: 191 QTMESDHYCLLIDSRSQLRRNGLGFKTFKYENMWRRDPSYKDAVESSWGTG 241
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 95.9 bits (237), Expect(3) = 2e-48
Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 1/176 (0%)
Frame = +3
Query: 498 EGARNQYNLLLAQQEDFWKQRAKLFWLKGGDANSRYFHTVASPRKRHNTIT*LKDSNGLW 677
E ++Q +L +E FW+Q+++ WL GGD N+ +FH + N ++ L D N
Sbjct: 318 EYIKDQLSLAYGDEELFWRQKSRQKWLAGGDKNTGFFHATVHSERLKNELSFLLDENDQE 377
Query: 678 LNWENGLGQHIVNHFVEIFTSSGCVC-DPIMECVAARVSAAQNEDLLAPFSELEIKEALF 854
+ G+ + F +FTS+ + + +E + A+V++ N +L+ +ELE+ A+F
Sbjct: 378 FTRNSDKGKIASSFFENLFTSTYILTHNNHLEGLQAKVTSEMNHNLIQEVTELEVYNAVF 437
Query: 855 SMDPDKSPGPDRMNPAFFQKFWDVTXXXXXXXXXXXXXXXXXPVGFNDTNIVLIPK 1022
S++ + +PGPD FFQ+ WD+ P +N T+I LIPK
Sbjct: 438 SINKESAPGPDGFTALFFQQHWDLVKHQILTEIFGFFETGVLPQDWNHTHICLIPK 493
Score = 82.0 bits (201), Expect(3) = 2e-48
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +1
Query: 1042 VSDLRPIALCNVAYKIISKALANRLKKVLPEVISDSQSAFVPKRLISDNIMIVLRLIIFL 1221
+SDLRPI+LC+V YKIISK L RLKK LP ++S +QSAFVP+RLISDNI++ +I L
Sbjct: 500 MSDLRPISLCSVLYKIISKILTQRLKKHLPAIVSTTQSAFVPQRLISDNILVAHEMIHSL 559
Query: 1222 KEKDREKTE 1248
+ DR E
Sbjct: 560 RTNDRISKE 568
Score = 64.3 bits (155), Expect(3) = 2e-48
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Frame = +1
Query: 40 DCGLVDLGMIGYQFTWERGRDTENWVEKRLDRGLANHSWLANLPNDKVWNLESLMSDHSP 219
+C + +LG G FTW R+ + WV+ +LDR N +W + PN W LE SDH P
Sbjct: 165 NCSMHELGSTGNSFTWGGNRN-DQWVQCKLDRCFGNPAWFSIFPNAHQWFLEKFGSDHRP 223
Query: 220 IFLELGKQYRVKRVRKFRFENV*LREKDCKEIVVNGWN----KGCETILTGKIETCGAEL 387
+ ++ + R +FR++ + C E++ WN +G + IE C +
Sbjct: 224 VLVKFTNDNELFR-GQFRYDKRLDDDPYCIEVIHRSWNSAMSQGTHSSFFSLIE-CRRAI 281
Query: 388 FKWGNILRNSFHERIKDTKK 447
W + + RIK +K
Sbjct: 282 SVWKHSSDTNAQSRIKRLRK 301
>gb|EMJ25879.1| hypothetical protein PRUPE_ppa025799mg [Prunus persica]
Length = 867
Score = 81.3 bits (199), Expect(4) = 2e-48
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Frame = +3
Query: 498 EGARNQYNLLLAQQEDFWKQRAKLFWLKGGDANSRYFHTVASPRKRHNTIT*LKDSNGLW 677
+G Q +LL ++E W+Q +++ WLK GD N+R+FH A+ R+R
Sbjct: 168 QGRMGQDQVLLKKKEVMWRQHSRVAWLKEGDKNTRFFHERANTRERKKKYN--------- 218
Query: 678 LNWENGLGQHIVNHFVEIF-TSSGCVCDPIMECVAARVSAAQNEDLLAPFSELEIKEALF 854
+G N F +F TS G + ++E + +V+ N LL F+ +++ ALF
Sbjct: 219 -KRVQVIGSMFCNFFNNLFSTSDGRDTERVLEAIEPQVTHQMNYQLLQSFTRTDVETALF 277
Query: 855 SMDPDKSPGPDRMNPAFFQKFWDV 926
M P K+PG D M F+Q +W +
Sbjct: 278 HMYPTKAPGHDGMPTLFYQCYWHI 301
Score = 74.7 bits (182), Expect(4) = 2e-48
Identities = 36/61 (59%), Positives = 47/61 (77%)
Frame = +1
Query: 1042 VSDLRPIALCNVAYKIISKALANRLKKVLPEVISDSQSAFVPKRLISDNIMIVLRLIIFL 1221
V++ RP++LC V YKII+KA NRLK +LP VIS SQSAFVP+RLI DN+M ++ F+
Sbjct: 313 VTEFRPLSLCIVIYKIIAKAFPNRLKCLLPSVISKSQSAFVPQRLILDNVMAAFEIMHFM 372
Query: 1222 K 1224
K
Sbjct: 373 K 373
Score = 60.5 bits (145), Expect(4) = 2e-48
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Frame = +1
Query: 1 PSWILTGF*MAIGDCGLVDLGMIGYQFTWERGRDTENWVEKRLDRGLANHSWLANLPNDK 180
P++ + F A DC L + GY FTW R + + VE+RL+ + N A+ +
Sbjct: 12 PTYQMNSFRQA--DCDLCSVPYQGYPFTWARTYLSGDMVEERLEICVVNGRISADYGHIL 69
Query: 181 VWNLESLMSDHSPIFLELGKQ---YRVKRVRKFRFENV*LREKDCKEIVVNGWNKGCETI 351
+L +L SDH PI EL + K+ R+F FE + +K C++I+ W+ T+
Sbjct: 70 TCHLVALGSDHYPILGELLNETPTVEAKKKRRFHFEQMWTLKKGCEDIIREDWD---STV 126
Query: 352 LTG----KIETCGAELFKWGNI 405
+ G +I+ C +L +W +
Sbjct: 127 VMGGVKEQIKNCAGKLAEWNKL 148
Score = 45.8 bits (107), Expect(4) = 2e-48
Identities = 17/37 (45%), Positives = 29/37 (78%)
Frame = +3
Query: 1200 FEINHFLKRKRQGKNGVAALKIDMSKAYDRIEWAYLK 1310
FEI HF+K ++G+ +K+DM+KAYD++EW++L+
Sbjct: 366 FEIMHFMKGLKKGQQTKMTIKLDMAKAYDQVEWSFLQ 402
>gb|EMJ25392.1| hypothetical protein PRUPE_ppa017155mg, partial [Prunus persica]
Length = 916
Score = 144 bits (362), Expect(2) = 9e-47
Identities = 97/296 (32%), Positives = 139/296 (46%), Gaps = 7/296 (2%)
Frame = +3
Query: 444 KKMSEFRGGRDPHSVAEFEGA-RNQYNLLLAQQEDFWKQRAKLFWLKGGDANSRYFHTVA 620
+K+ E H E A Q + L+A+ E +W+QR++ WLK GD NS++FH A
Sbjct: 183 EKLGELLDAPPSHHTVELRNALTKQLDSLMAKNEVYWRQRSRATWLKAGDRNSKFFHYKA 242
Query: 621 SPRKRHNTIT*LKDSNGLWLNWENGLGQHIVNHFVEIFTSSGCV-CDPIMECVAARVSAA 797
S +R NTI+ L+D +G W E GL Q +VN+F +F+S G +++ V RV+
Sbjct: 243 SSCRRRNTISALEDEHGHWQTTEQGLTQTVVNYFQHLFSSIGSSDYTEVVDGVRGRVTEE 302
Query: 798 QNEDLLAPFSELEIKEALFSMDPDKSPGPDRMNPAFFQKFWDVTXXXXXXXXXXXXXXXX 977
N+ LLA F+ EIK ALF M P K+PGPD +P F+QK+W +
Sbjct: 303 MNQALLAEFTPEEIKIALFQMHPSKAPGPDDFSPFFYQKYWQIVGEDMVAAVLHFFKTGK 362
Query: 978 XPVGFNDTNIVLIPKKEQS*GCIGFKAYCFV*CCV*NYLXXXXXXXXXXXXXXXXXXXXC 1157
N T++ LIPK + + C V N +
Sbjct: 363 LLKKINFTHVALIPKVHEPKNMTQLRPISL--CNVFNKIGAKVLATHLKAILPTLISDTQ 420
Query: 1158 IC-----A*AANLG*YHDRFEINHFLKRKRQGKNGVAALKIDMSKAYDRIEWAYLK 1310
A + N + + H RQ G ALKIDMSKAYDR+EW++L+
Sbjct: 421 SAFAPDRAISDNSIVAFELLHMMHKKNHGRQ---GYLALKIDMSKAYDRVEWSFLE 473
Score = 71.6 bits (174), Expect(2) = 9e-47
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Frame = +1
Query: 13 LTGF*MAIGDCGLVDLGMIGYQFTWERGRDTENWVEKRLDRGLANHSWLANLPNDKVWNL 192
+ GF AI CG D+G G ++TW R E + RLDR LA W + KV +L
Sbjct: 35 MLGFRQAIDTCGFKDMGYTGPKYTWWRNNPME--IRIRLDRVLATADWCSRFLGTKVIHL 92
Query: 193 ESLMSDHSPIFLELGKQYRV--KRVRKFRFENV*LREKDCKEIVVNGWNKGCE----TIL 354
SDH P+ + + ++ + +R + FRFE + +C + + +GW + C
Sbjct: 93 NPTKSDHLPLKVTISERMLLNGRRKKLFRFEEMWAEHVNCMQTIQDGWQRTCRGSAPFTT 152
Query: 355 TGKIETCGAELFKWGNILRNSFHERIKDTKKK 450
T K++ +L W +IK T++K
Sbjct: 153 TEKLKCTRHQLLGWSKCNFGHLPNQIKITREK 184
>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|62733115|gb|AAX95232.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 1324
Score = 92.0 bits (227), Expect(3) = 2e-46
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
Frame = +3
Query: 534 QQEDFWKQRAKLFWLKGGDANSRYFHTVASPRKRHNTIT*LKDSNGLWLNWENGLGQHIV 713
Q+E +W+QRA WL+ GD N+++FH AS RK+ N I L+ +G + E G I
Sbjct: 787 QRELYWRQRANQHWLEKGDRNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLIS 846
Query: 714 NHFVEIFTSSGCV-CDPIMECVAARVSAAQNEDLLAPFSELEIKEALFSM-DPDKSPGPD 887
+ ++FT+ + D +++ V RV++ N++L+ + EIK+AL S+ D PG D
Sbjct: 847 EFYKQLFTAGVPLNLDELLQNVPKRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPGSD 906
Query: 888 RMNPAFFQKFWDVTXXXXXXXXXXXXXXXXXPVGFNDTNIVLIPK 1022
M F+++FW+ P +NDT +VLIPK
Sbjct: 907 GMPALFYKQFWECVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPK 951
Score = 84.3 bits (207), Expect(3) = 2e-46
Identities = 44/78 (56%), Positives = 55/78 (70%)
Frame = +1
Query: 1003 ILFLSLKKNNLEVVSDLRPIALCNVAYKIISKALANRLKKVLPEVISDSQSAFVPKRLIS 1182
++ L K N E + DLRPI+LCNV YKI SK LANRLK +L E+IS Q AFVP+R+I+
Sbjct: 945 VVVLIPKVPNPERIKDLRPISLCNVVYKIASKVLANRLKPLLSEIISPIQIAFVPQRMIT 1004
Query: 1183 DNIMIVLRLIIFLKEKDR 1236
DNI++ L FLK K R
Sbjct: 1005 DNILLAYELTHFLKTKRR 1022
Score = 59.3 bits (142), Expect(3) = 2e-46
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 9/144 (6%)
Frame = +1
Query: 43 CGLVDLGMIGYQFTWERGRDT-ENWVEKRLDRGLANHSWLANLPNDKVWNLESLMSDHSP 219
C L +LG G FTW + ++ +RLDR +A+ W P+ +V + SDH P
Sbjct: 615 CSLSNLGFTGDPFTWRNNWCVRDGYIRERLDRAVADSDWCCRFPSFRVRKGDPRHSDHHP 674
Query: 220 IFLELGKQYRVKRVRK---FRFENV*LREKDCKEIVVNGWN-----KGCETILTGKIETC 375
+ + + R FRFE RE+ C IV N W +G + + I
Sbjct: 675 VIVTTSNEVIWNGGRSKPGFRFEAGWAREEHCAPIVENAWKLSVGPRGGKVM--DAIREV 732
Query: 376 GAELFKWGNILRNSFHERIKDTKK 447
A L+ W +RIK K+
Sbjct: 733 AANLWDWSKNFLGDLEKRIKKAKQ 756
>gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1301
Score = 92.0 bits (227), Expect(3) = 2e-46
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
Frame = +3
Query: 534 QQEDFWKQRAKLFWLKGGDANSRYFHTVASPRKRHNTIT*LKDSNGLWLNWENGLGQHIV 713
Q+E +W+QRA WL+ GD N+++FH AS RK+ N I L+ +G + E G I
Sbjct: 764 QRELYWRQRANQHWLEKGDRNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLIS 823
Query: 714 NHFVEIFTSSGCV-CDPIMECVAARVSAAQNEDLLAPFSELEIKEALFSM-DPDKSPGPD 887
+ ++FT+ + D +++ V RV++ N++L+ + EIK+AL S+ D PG D
Sbjct: 824 EFYKQLFTAGVPLNLDELLQNVPKRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPGSD 883
Query: 888 RMNPAFFQKFWDVTXXXXXXXXXXXXXXXXXPVGFNDTNIVLIPK 1022
M F+++FW+ P +NDT +VLIPK
Sbjct: 884 GMPALFYKQFWECVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPK 928
Score = 84.3 bits (207), Expect(3) = 2e-46
Identities = 44/78 (56%), Positives = 55/78 (70%)
Frame = +1
Query: 1003 ILFLSLKKNNLEVVSDLRPIALCNVAYKIISKALANRLKKVLPEVISDSQSAFVPKRLIS 1182
++ L K N E + DLRPI+LCNV YKI SK LANRLK +L E+IS Q AFVP+R+I+
Sbjct: 922 VVVLIPKVPNPERIKDLRPISLCNVVYKIASKVLANRLKPLLSEIISPIQIAFVPQRMIT 981
Query: 1183 DNIMIVLRLIIFLKEKDR 1236
DNI++ L FLK K R
Sbjct: 982 DNILLAYELTHFLKTKRR 999
Score = 59.3 bits (142), Expect(3) = 2e-46
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 9/144 (6%)
Frame = +1
Query: 43 CGLVDLGMIGYQFTWERGRDT-ENWVEKRLDRGLANHSWLANLPNDKVWNLESLMSDHSP 219
C L +LG G FTW + ++ +RLDR +A+ W P+ +V + SDH P
Sbjct: 592 CSLSNLGFTGDPFTWRNNWCVRDGYIRERLDRAVADSDWCCRFPSFRVRKGDPRHSDHHP 651
Query: 220 IFLELGKQYRVKRVRK---FRFENV*LREKDCKEIVVNGWN-----KGCETILTGKIETC 375
+ + + R FRFE RE+ C IV N W +G + + I
Sbjct: 652 VIVTTSNEVIWNGGRSKPGFRFEAGWAREEHCAPIVENAWKLSVGPRGGKVM--DAIREV 709
Query: 376 GAELFKWGNILRNSFHERIKDTKK 447
A L+ W +RIK K+
Sbjct: 710 AANLWDWSKNFLGDLEKRIKKAKQ 733
>gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japonica Group]
Length = 825
Score = 92.0 bits (227), Expect(3) = 2e-46
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
Frame = +3
Query: 534 QQEDFWKQRAKLFWLKGGDANSRYFHTVASPRKRHNTIT*LKDSNGLWLNWENGLGQHIV 713
Q+E +W+QRA WL+ GD N+++FH AS RK+ N I L+ +G + E G I
Sbjct: 288 QRELYWRQRANQHWLEKGDRNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLIS 347
Query: 714 NHFVEIFTSSGCV-CDPIMECVAARVSAAQNEDLLAPFSELEIKEALFSM-DPDKSPGPD 887
+ ++FT+ + D +++ V RV++ N++L+ + EIK+AL S+ D PG D
Sbjct: 348 EFYKQLFTAGVPLNLDELLQNVPKRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPGSD 407
Query: 888 RMNPAFFQKFWDVTXXXXXXXXXXXXXXXXXPVGFNDTNIVLIPK 1022
M F+++FW+ P +NDT +VLIPK
Sbjct: 408 GMPALFYKQFWECVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPK 452
Score = 84.3 bits (207), Expect(3) = 2e-46
Identities = 44/78 (56%), Positives = 55/78 (70%)
Frame = +1
Query: 1003 ILFLSLKKNNLEVVSDLRPIALCNVAYKIISKALANRLKKVLPEVISDSQSAFVPKRLIS 1182
++ L K N E + DLRPI+LCNV YKI SK LANRLK +L E+IS Q AFVP+R+I+
Sbjct: 446 VVVLIPKVPNPERIKDLRPISLCNVVYKIASKVLANRLKPLLSEIISPIQIAFVPQRMIT 505
Query: 1183 DNIMIVLRLIIFLKEKDR 1236
DNI++ L FLK K R
Sbjct: 506 DNILLAYELTHFLKTKRR 523
Score = 59.3 bits (142), Expect(3) = 2e-46
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 9/144 (6%)
Frame = +1
Query: 43 CGLVDLGMIGYQFTWERGRDT-ENWVEKRLDRGLANHSWLANLPNDKVWNLESLMSDHSP 219
C L +LG G FTW + ++ +RLDR +A+ W P+ +V + SDH P
Sbjct: 116 CSLSNLGFTGDPFTWRNNWCVRDGYIRERLDRAVADSDWCCRFPSFRVRKGDPRHSDHHP 175
Query: 220 IFLELGKQYRVKRVRK---FRFENV*LREKDCKEIVVNGWN-----KGCETILTGKIETC 375
+ + + R FRFE RE+ C IV N W +G + + I
Sbjct: 176 VIVTTSNEVIWNGGRSKPGFRFEAGWAREEHCAPIVENAWKLSVGPRGGKVM--DAIREV 233
Query: 376 GAELFKWGNILRNSFHERIKDTKK 447
A L+ W +RIK K+
Sbjct: 234 AANLWDWSKNFLGDLEKRIKKAKQ 257
>ref|NP_001057661.2| Os06g0484800 [Oryza sativa Japonica Group]
gi|125597263|gb|EAZ37043.1| hypothetical protein
OsJ_21387 [Oryza sativa Japonica Group]
gi|255677053|dbj|BAF19575.2| Os06g0484800 [Oryza sativa
Japonica Group]
Length = 935
Score = 84.7 bits (208), Expect(4) = 7e-46
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 1/196 (0%)
Frame = +3
Query: 450 MSEFRGGRDPHSVAEFEGAR-NQYNLLLAQQEDFWKQRAKLFWLKGGDANSRYFHTVASP 626
+ + + +D H++ + E +Y+LLL + +F +QRAK W+K GD N+ +F A
Sbjct: 129 IKQIQASQDRHNLVDKEKELIAKYDLLLEKLSEFHRQRAKKDWIKDGDRNTSFFQQAAIK 188
Query: 627 RKRHNTIT*LKDSNGLWLNWENGLGQHIVNHFVEIFTSSGCVCDPIMECVAARVSAAQNE 806
R+R N I + SN +++ + + Q +N+F ++F S ++ Q
Sbjct: 189 RRRKNRIASIV-SNDVYITNPDDIAQIFINYFSDLFCSDR---TDRPNTYLPNTTSPQEM 244
Query: 807 DLLAPFSELEIKEALFSMDPDKSPGPDRMNPAFFQKFWDVTXXXXXXXXXXXXXXXXXPV 986
D P E EI + M + SPGPD +N AF++ W P
Sbjct: 245 DWQIP-DEEEIWSIIKGMRKNASPGPDGLNAAFYRSAWSWIKDDLMTLVQDFYQTGNIPP 303
Query: 987 GFNDTNIVLIPKKEQS 1034
N TNIVLIPKK +S
Sbjct: 304 ELNKTNIVLIPKKNRS 319
Score = 70.5 bits (171), Expect(4) = 7e-46
Identities = 33/64 (51%), Positives = 46/64 (71%)
Frame = +1
Query: 1021 KKNNLEVVSDLRPIALCNVAYKIISKALANRLKKVLPEVISDSQSAFVPKRLISDNIMIV 1200
KKN D RPI+LCNV YKI++K++ANR+K LP+ I DSQ AF+P R I++NI+I
Sbjct: 315 KKNRSISPKDFRPISLCNVPYKILAKSIANRIKGKLPDFICDSQHAFIPGRRIANNIIIA 374
Query: 1201 LRLI 1212
++
Sbjct: 375 QEIV 378
Score = 68.2 bits (165), Expect(4) = 7e-46
Identities = 38/113 (33%), Positives = 54/113 (47%)
Frame = +1
Query: 58 LGMIGYQFTWERGRDTENWVEKRLDRGLANHSWLANLPNDKVWNLESLMSDHSPIFLELG 237
+G G +TW R + +RLDR LAN W + PN V+++ + DH+PI + L
Sbjct: 1 MGYNGPAYTWTNKRKGNEVIFERLDRCLANVEWCHHFPNTNVYHIPLIYGDHAPILVLLN 60
Query: 238 KQYRVKRVRKFRFENV*LREKDCKEIVVNGWNKGCETILTGKIETCGAELFKW 396
+R K R F+FEN L E+D + N WN C K + L W
Sbjct: 61 PNFR-KPKRSFKFENWWLLEEDFNTVAKNSWN-DCNGSFVSKTKFLSKNLSTW 111
Score = 30.4 bits (67), Expect(4) = 7e-46
Identities = 10/17 (58%), Positives = 16/17 (94%)
Frame = +3
Query: 1257 LKIDMSKAYDRIEWAYL 1307
+KID+SKA+DR+EW ++
Sbjct: 393 IKIDLSKAFDRLEWDFI 409
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 113 bits (283), Expect(2) = 7e-44
Identities = 85/261 (32%), Positives = 118/261 (45%), Gaps = 3/261 (1%)
Frame = +3
Query: 537 QEDFWKQRAKLFWLKGGDANSRYFHTVASPRKRHNTIT*LKDSNGLWLNWENGLGQHIVN 716
+E +W RA+ ++ GD N++YFH AS RKR NTI L D NG+W + + +
Sbjct: 335 EESYWHARARANEIRDGDKNTKYFHHKASQRKRRNTINELLDENGVWKKGREEICGVVQH 394
Query: 717 HFVEIF-TSSGCVCDPIMECVAARVSAAQNEDLLAPFSELEIKEALFSMDPDKSPGPDRM 893
+F +F T S + +E ++ VS N LL S E+KEALF+M P+K+PG D +
Sbjct: 395 YFEGLFATDSPVNMELALEGLSHCVSTDMNTALLMLPSGDEVKEALFAMHPNKAPGIDGL 454
Query: 894 NPAFFQKFWDVTXXXXXXXXXXXXXXXXXPVGFNDTNIVLIPKKEQS*GCIGFKAYCFV* 1073
+ FFQKFW + N T IVLIPK + F+
Sbjct: 455 HALFFQKFWHILGSDVISFVQSWWRGMGDLGVVNKTCIVLIPKCDHPQSMKDFRPISL-- 512
Query: 1074 CCV*NYLXXXXXXXXXXXXXXXXXXXXCICA*AANLG*YHDRFEINHFLKRKRQ--GKNG 1247
C V + L + F KR+ KNG
Sbjct: 513 CTVLYKILSKTLANRLKVILPAIISPNQSAFVPRRLITDNALVAFEIFHAMKRKDANKNG 572
Query: 1248 VAALKIDMSKAYDRIEWAYLK 1310
V ALK+DMSKAYDR+EW +L+
Sbjct: 573 VCALKLDMSKAYDRVEWCFLE 593
Score = 92.4 bits (228), Expect(2) = 7e-44
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Frame = +1
Query: 10 ILTGF*MAIGDCGLVDLGMIGYQFTWERGRDTENWVEKRLDRGLANHSWLANLPNDKVWN 189
++ F I DC + DLG +G +FTW+RG + +RLDR LAN W N P+ +V +
Sbjct: 157 VMDAFREVIDDCAVKDLGYVGNRFTWQRGNSPSTLIRERLDRMLANDEWCDNFPSWEVVH 216
Query: 190 LESLMSDHSPIFLELGKQYRVKRVRK-FRFENV*LREKDCKEIVVNGWNKGCETILTGKI 366
L SDH+P+ L+ G +R K F+FE + L +++C +IV WN +T ++
Sbjct: 217 LPRYRSDHAPLLLKTGVNDSFRRGNKLFKFEAMWLSKEECGKIVEEAWNGSAGEDITNRL 276
Query: 367 ETCGAELFKWGNILRNSFHERIKD 438
+ L W + +R K+
Sbjct: 277 DEVSRSLSTWATKTFGNLKKRKKE 300
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 120 bits (301), Expect(2) = 5e-41
Identities = 82/276 (29%), Positives = 124/276 (44%), Gaps = 14/276 (5%)
Frame = +3
Query: 525 LLAQQEDFWKQRAKLFWLKGGDANSRYFHTVASPRKRHNTIT*LKDSNGLWLNWENGLGQ 704
L A+ E +W R+++ +K GD N++YFH AS RK+ N + L D G W + +
Sbjct: 330 LHAKHEAYWYLRSRVAEVKDGDKNTKYFHHKASQRKKRNFVKGLFDGLGTWREEADHIEN 389
Query: 705 HIVNHFVEIFTSSG---CVCDPIMECVAARVSAAQNEDLLAPFSELEIKEALFSMDPDKS 875
++F IFTSS + +M + V+ N LL PFS+ EI AL M P K+
Sbjct: 390 IFTSYFSSIFTSSNPSDLSLEAVMSVIEPVVTEEHNLKLLEPFSKDEILAALQQMHPCKA 449
Query: 876 PGPDRMNPAFFQKFWDVTXXXXXXXXXXXXXXXXXPVGFNDTNIVLIPKKEQS*GCIGFK 1055
PGPD M+ F+Q+FW + P N+TNI LIPK + F+
Sbjct: 450 PGPDGMHVIFYQRFWHIVGDDVTSFISNILHGHSSPSCVNNTNIALIPKVKNPTKAAEFR 509
Query: 1056 --AYC---------FV*CCV*NYLXXXXXXXXXXXXXXXXXXXXCICA*AANLG*YHDRF 1202
A C + + ++L + A
Sbjct: 510 PIALCNVLYKLMSKAIVMRLKSFLPEIISENQSAFVPGRLITDNALIA-----------M 558
Query: 1203 EINHFLKRKRQGKNGVAALKIDMSKAYDRIEWAYLK 1310
E+ H +K + + + G A+K+DMSKAYDR+EW +L+
Sbjct: 559 EVFHSMKNRNRSRKGTIAMKLDMSKAYDRVEWGFLR 594
Score = 75.9 bits (185), Expect(2) = 5e-41
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Frame = +1
Query: 49 LVDLGMIGYQFTWERGRDTENWVEKRLDRGLANHSWLANLPNDKVWNLESLMSDHSPIFL 228
L DLG +G +TWERGR + +RLDR L ++SWL P+ + SDHS I L
Sbjct: 169 LRDLGYVGTWYTWERGRSPSTCIRERLDRYLCSNSWLDLYPDSVPEHTIRYKSDHSAIVL 228
Query: 229 ELGKQYRVK-RVRKFRFENV*LREKDCKEIVVNGWNKGCETILTGKIETCGAELFKWGNI 405
+ R + + R+ FE L + +C+ +V W ++TG++ + G L +W
Sbjct: 229 RSQRAGRPRGKTRRLHFETSWLLDDECEAVVRESWENSEGEVMTGRVASMGQCLVRWSTK 288
Query: 406 LRNSFHERIKDTKK 447
+ ++I+ +K
Sbjct: 289 KFKNLSKQIETAEK 302
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 119 bits (298), Expect(2) = 7e-41
Identities = 84/267 (31%), Positives = 120/267 (44%), Gaps = 5/267 (1%)
Frame = +3
Query: 525 LLAQQEDFWKQRAKLFWLKGGDANSRYFHTVASPRKRHNTIT*LKDSNGLWLNWENGLGQ 704
+L ++E WKQRA++ W K GD N+++FH A R R N I + + W + +G
Sbjct: 616 VLEREELLWKQRARVSWFKCGDRNTQFFHQTAKQRGRSNRICGILGEDNRWRSDVTDIGC 675
Query: 705 HIVNHFVEIFTSSGCVCD-PIMECVAARVSAAQNEDLLAPFSELEIKEALFSMDPDKSPG 881
V++F +FT+ G D I E V +RV A + L + EI+ AL M+P KSPG
Sbjct: 676 VFVSYFRNLFTAGGGSMDETIFEAVTSRVDATSKKSLDQVYRREEIELALKDMNPSKSPG 735
Query: 882 PDRMNPAFFQKFWDVTXXXXXXXXXXXXXXXXXPVGFNDTNIVLIPKKEQS*GCIGFKAY 1061
D M FFQKFW++ FN + I LIPK + ++
Sbjct: 736 SDGMPARFFQKFWNIIGNDVVDVCLRFLNGDGSIADFNHSLIALIPKVQNPKKVTEYRPI 795
Query: 1062 CFV*CCV*NYLXXXXXXXXXXXXXXXXXXXXCICA*AANLG*YHDR----FEINHFLKRK 1229
C V L + + HD FEI H LKR+
Sbjct: 796 SL--CNVVYKLVSKVLANRLKSVLPEVIAENQSAFMSQRI--IHDNIIAAFEIIHCLKRR 851
Query: 1230 RQGKNGVAALKIDMSKAYDRIEWAYLK 1310
+ ALK+DM+KAYDR+EW +L+
Sbjct: 852 GKDSRQKIALKLDMTKAYDRVEWGFLQ 878
Score = 76.6 bits (187), Expect(2) = 7e-41
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Frame = +1
Query: 13 LTGF*MAIGDCGLVDLGMIGYQFTWERGRDTENWVEKRLDRGLANHSWLANLPNDKVWNL 192
+ GF A+ DCGL + G+Q+TW+ R + V++RLDRG N + + +L
Sbjct: 441 IDGFRHAVEDCGLYEFAFTGFQYTWDNRRKGDANVKERLDRGFGNLALIQQWGGISCHHL 500
Query: 193 ESLMSDHSPIFLE----LGKQYRVKRVRKFRFENV*LREKDCKEIVVNGWNKGCETILTG 360
S+ SDH P+ E + + +R R+F FE++ L + C+ +V W G +++ G
Sbjct: 501 VSMSSDHCPLLFENDPPMSRGGNWRRKRRFLFEDMWLTHEGCRGVVERQWLFGVNSVV-G 559
Query: 361 KIETCGAELFKWGNILRNSFHERIKDTKKK 450
K+E L +W S +++ +++
Sbjct: 560 KLEQVAGGLKRWNQETFGSVKKKVASLREE 589