BLASTX nr result
ID: Rehmannia22_contig00019238
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00019238
(685 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADU56212.1| gag-pol polyprotein [Solanum lycopersicum] 298 1e-90
ref|XP_006366848.1| PREDICTED: uncharacterized protein LOC102605... 295 2e-89
ref|XP_006353601.1| PREDICTED: uncharacterized protein LOC102586... 291 2e-88
ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581... 290 2e-87
ref|XP_004153733.1| PREDICTED: uncharacterized protein LOC101205... 283 7e-86
emb|CAB40024.1| putative reverse-transcriptase-like protein [Ara... 280 4e-83
gb|AAD22339.1| putative retroelement pol polyprotein [Arabidopsi... 276 5e-82
ref|XP_004974643.1| PREDICTED: uncharacterized protein LOC101776... 274 8e-82
gb|ABQ44355.1| polyprotein [Zea mays] 272 1e-81
gb|AAD20658.1| putative retroelement pol polyprotein [Arabidopsi... 275 5e-81
gb|EOY00066.1| Retrotransposon protein [Theobroma cacao] 306 5e-81
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum] 265 6e-81
gb|EOY26390.1| Uncharacterized protein TCM_027940 [Theobroma cacao] 303 3e-80
gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobrom... 303 3e-80
emb|CAD39388.2| OSJNBb0016B03.9 [Oryza sativa Japonica Group] 266 4e-80
gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobrom... 302 6e-80
gb|AAL77157.1|AC091732_8 Putative polyprotein [Oryza sativa Japo... 265 7e-80
gb|ABA98372.1| retrotransposon protein, putative, Ty3-gypsy subc... 265 7e-80
gb|ABA97793.1| retrotransposon protein, putative, Ty3-gypsy subc... 265 9e-80
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e... 264 9e-80
>gb|ADU56212.1| gag-pol polyprotein [Solanum lycopersicum]
Length = 624
Score = 298 bits (762), Expect(2) = 1e-90
Identities = 142/194 (73%), Positives = 160/194 (82%)
Frame = +3
Query: 6 IELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTLR 185
I+L+PGT PISIPPYRMAP KG+IRPS SPWGAPVLFVK KDG+ R
Sbjct: 33 IDLEPGTRPISIPPYRMAPAELRELKAQLQELLSKGFIRPSASPWGAPVLFVKTKDGSFR 92
Query: 186 LCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAFR 365
+CIDYRQLN+VT+KNKYPLPRIDDLFDQLQGA VFSKIDLRSGYHQLKI TD+ KTAFR
Sbjct: 93 MCIDYRQLNKVTIKNKYPLPRIDDLFDQLQGACVFSKIDLRSGYHQLKIRATDVPKTAFR 152
Query: 366 TRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHLR 545
TRYGHYEF+VM FGLTNAPA FM+LMN +F+PYLD FVIVFIDDIL+YSKS EEHE+HLR
Sbjct: 153 TRYGHYEFVVMSFGLTNAPAAFMSLMNGIFKPYLDLFVIVFIDDILIYSKSKEEHEEHLR 212
Query: 546 IVLQNLARETVVCK 587
+VL+ L + + K
Sbjct: 213 MVLEMLREKKLYAK 226
Score = 62.8 bits (151), Expect(2) = 1e-90
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = +1
Query: 562 LREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQKIK 681
LREK+LYAK SKCEFWLD V FLGH VS DG+ VD KI+
Sbjct: 218 LREKKLYAKFSKCEFWLDTVSFLGHVVSKDGVMVDPSKIE 257
>ref|XP_006366848.1| PREDICTED: uncharacterized protein LOC102605741 [Solanum tuberosum]
Length = 823
Score = 295 bits (756), Expect(2) = 2e-89
Identities = 141/194 (72%), Positives = 159/194 (81%)
Frame = +3
Query: 6 IELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTLR 185
I+++PGT PISIPPYRMAP KG+IRPSVSPWGAPVLFVKKKDG++R
Sbjct: 111 IDIEPGTQPISIPPYRMAPAELKELKEQLQDLLSKGFIRPSVSPWGAPVLFVKKKDGSMR 170
Query: 186 LCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAFR 365
+CIDYRQLN+VT++NKYP+PRIDDLFDQLQGA +FSKIDLRSGYHQLK+ DI KTAFR
Sbjct: 171 MCIDYRQLNKVTIRNKYPIPRIDDLFDQLQGASIFSKIDLRSGYHQLKVRVEDIPKTAFR 230
Query: 366 TRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHLR 545
TRYGHYEFLVM FGLTNAPA FM LMN VFRPYLD FVIVFIDDIL+YS+S E+HE HLR
Sbjct: 231 TRYGHYEFLVMSFGLTNAPAAFMDLMNGVFRPYLDSFVIVFIDDILIYSRSKEKHEHHLR 290
Query: 546 IVLQNLARETVVCK 587
IVL L + + K
Sbjct: 291 IVLGILKEKKLYAK 304
Score = 60.8 bits (146), Expect(2) = 2e-89
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +1
Query: 562 LREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQKIKA 684
L+EK+LYAK SKCEFWL V FLGH VS +GI VD +KI+A
Sbjct: 296 LKEKKLYAKFSKCEFWLSSVAFLGHVVSKEGIMVDPKKIEA 336
>ref|XP_006353601.1| PREDICTED: uncharacterized protein LOC102586067 [Solanum tuberosum]
Length = 881
Score = 291 bits (744), Expect(2) = 2e-88
Identities = 140/194 (72%), Positives = 157/194 (80%)
Frame = +3
Query: 6 IELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTLR 185
I+L P T PISIPPYRMAP +KG+IRPS SPWGAPVLFVKKKDG+LR
Sbjct: 511 IDLLPDTQPISIPPYRMAPAELKELKEQLKDLLEKGFIRPSHSPWGAPVLFVKKKDGSLR 570
Query: 186 LCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAFR 365
+CIDYRQLNRVTVKN+YPLPRIDDLFDQL GA FSKIDLRSGYHQ+K+ E DI KTAFR
Sbjct: 571 MCIDYRQLNRVTVKNRYPLPRIDDLFDQLHGASHFSKIDLRSGYHQVKVRECDIPKTAFR 630
Query: 366 TRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHLR 545
TRYGHYEF+VM FGLTNAPA+FM LMN VF+PYLD FV+VFIDDIL+YS+ EEH+ HLR
Sbjct: 631 TRYGHYEFVVMSFGLTNAPALFMDLMNRVFKPYLDSFVVVFIDDILIYSRGEEEHKGHLR 690
Query: 546 IVLQNLARETVVCK 587
+VLQ L E + K
Sbjct: 691 VVLQRLREEKLYAK 704
Score = 62.4 bits (150), Expect(2) = 2e-88
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +1
Query: 562 LREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQK 675
LRE++LYAK KCEFWL +V FLGH VSGDGIKVD +K
Sbjct: 696 LREEKLYAKYEKCEFWLKEVAFLGHVVSGDGIKVDPKK 733
>ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
Length = 1946
Score = 290 bits (743), Expect(2) = 2e-87
Identities = 141/194 (72%), Positives = 156/194 (80%)
Frame = +3
Query: 6 IELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTLR 185
I+L P T PI IPPYR+AP +KG+IRPS SPWGAPVLFVKKKDG+LR
Sbjct: 1001 IDLLPDTQPIFIPPYRIAPAELKELKEQLKDLLEKGFIRPSQSPWGAPVLFVKKKDGSLR 1060
Query: 186 LCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAFR 365
+CIDYRQLNRVTVKNKYPLPRIDDLFDQLQGA FSKIDLRSGYHQ+K+ E DI KTAFR
Sbjct: 1061 MCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGASHFSKIDLRSGYHQVKVRECDIPKTAFR 1120
Query: 366 TRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHLR 545
TRYGHYEF+VM FGLTNAPA+FM LMN VF+PYLD FV+VFIDDIL+YS S EEH HLR
Sbjct: 1121 TRYGHYEFVVMSFGLTNAPAIFMDLMNRVFKPYLDSFVVVFIDDILIYSHSEEEHMGHLR 1180
Query: 546 IVLQNLARETVVCK 587
+VLQ L E + K
Sbjct: 1181 VVLQRLREEKLYAK 1194
Score = 59.3 bits (142), Expect(2) = 2e-87
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +1
Query: 562 LREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQK 675
LRE++LYAK KCEFWL +V FLGH VSG GIKVD +K
Sbjct: 1186 LREEKLYAKYEKCEFWLREVAFLGHVVSGGGIKVDPKK 1223
>ref|XP_004153733.1| PREDICTED: uncharacterized protein LOC101205308, partial [Cucumis
sativus]
Length = 768
Score = 283 bits (724), Expect(2) = 7e-86
Identities = 138/186 (74%), Positives = 155/186 (83%)
Frame = +3
Query: 6 IELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTLR 185
IEL+P TTPIS PYRMA DKG+IRPSVSPWGAPVLFVKKKDG++R
Sbjct: 525 IELEPDTTPISRAPYRMALAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 584
Query: 186 LCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAFR 365
LCIDYR+LN+VT+KN YPLPRIDDLFDQLQGA VFSKIDLRSGYHQL+I ++DI KTAFR
Sbjct: 585 LCIDYRELNKVTIKNIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR 644
Query: 366 TRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHLR 545
+RYGHYEF+VMPFGLTNAPAVFM LMN VF+ +LD FVIVFIDDILVYSK+ EHE+HL
Sbjct: 645 SRYGHYEFMVMPFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILVYSKTEAEHEEHLH 704
Query: 546 IVLQNL 563
VL+ L
Sbjct: 705 KVLETL 710
Score = 61.2 bits (147), Expect(2) = 7e-86
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = +1
Query: 556 KTLREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQKIKA 684
+TLR +LYAK SKCEFWL QV FLGH VS +G+ VD KI+A
Sbjct: 708 ETLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDPAKIEA 750
>emb|CAB40024.1| putative reverse-transcriptase-like protein [Arabidopsis thaliana]
gi|7267755|emb|CAB78181.1| putative
reverse-transcriptase-like protein [Arabidopsis thaliana]
Length = 1240
Score = 280 bits (717), Expect(2) = 4e-83
Identities = 135/195 (69%), Positives = 156/195 (80%)
Frame = +3
Query: 3 TIELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTL 182
TIEL+PGT P+S PYRMAP KG+IRPS SPWGAPVLFVKKKDG+
Sbjct: 482 TIELEPGTAPLSKAPYRMAPAEMAELKKQLKDLLGKGFIRPSTSPWGAPVLFVKKKDGSF 541
Query: 183 RLCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAF 362
RLCIDYR+LNRVTVKN+YPLPRID+L DQL+GA FSKIDL SGYHQ+ IAE D+ KTAF
Sbjct: 542 RLCIDYRELNRVTVKNRYPLPRIDELLDQLRGATCFSKIDLTSGYHQIPIAEADVRKTAF 601
Query: 363 RTRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHL 542
RTRYGH+EF+VMPFGLTNAPAVFM LMN+VF+ +LD+FVI+FIDDILVYSKS EE E HL
Sbjct: 602 RTRYGHFEFVVMPFGLTNAPAVFMRLMNSVFQEFLDEFVIIFIDDILVYSKSPEEQEVHL 661
Query: 543 RIVLQNLARETVVCK 587
R V++ L + + K
Sbjct: 662 RRVMEKLREQKLFAK 676
Score = 54.7 bits (130), Expect(2) = 4e-83
Identities = 24/41 (58%), Positives = 33/41 (80%)
Frame = +1
Query: 562 LREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQKIKA 684
LRE++L+AKLSKC FW ++ FLGH VS +G+ VD +KI+A
Sbjct: 668 LREQKLFAKLSKCSFWQREMGFLGHIVSAEGVSVDPEKIEA 708
>gb|AAD22339.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1411
Score = 276 bits (706), Expect(2) = 5e-82
Identities = 134/195 (68%), Positives = 153/195 (78%)
Frame = +3
Query: 3 TIELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTL 182
TIEL+PGT P+S PYRMAP KG+IRPS SPWGAPVLFVKKKDG+
Sbjct: 508 TIELEPGTAPLSKAPYRMAPAEMTELKKQLEDLLGKGFIRPSTSPWGAPVLFVKKKDGSF 567
Query: 183 RLCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAF 362
RLCIDYR LN VTVKNKYPLPRID+L DQL+GA FSKIDL SGYHQ+ IAE D+ KTAF
Sbjct: 568 RLCIDYRGLNWVTVKNKYPLPRIDELLDQLRGATCFSKIDLTSGYHQIPIAEADVRKTAF 627
Query: 363 RTRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHL 542
RTRYGH+EF+VMPF LTNAPA FM LMN+VF+ +LD+FVI+FIDDILVYSKS EEHE HL
Sbjct: 628 RTRYGHFEFVVMPFALTNAPAAFMRLMNSVFQEFLDEFVIIFIDDILVYSKSPEEHEVHL 687
Query: 543 RIVLQNLARETVVCK 587
R V++ L + + K
Sbjct: 688 RRVMEKLREQKLFAK 702
Score = 55.5 bits (132), Expect(2) = 5e-82
Identities = 24/41 (58%), Positives = 33/41 (80%)
Frame = +1
Query: 562 LREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQKIKA 684
LRE++L+AKLSKC FW ++ FLGH VS +G+ VD +KI+A
Sbjct: 694 LREQKLFAKLSKCSFWQREIGFLGHIVSAEGVSVDPEKIEA 734
>ref|XP_004974643.1| PREDICTED: uncharacterized protein LOC101776408 [Setaria italica]
Length = 1375
Score = 274 bits (700), Expect(2) = 8e-82
Identities = 136/195 (69%), Positives = 149/195 (76%)
Frame = +3
Query: 3 TIELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTL 182
TIEL+PGT PIS PYRM P DKG++RPS SPWG P LFVKKKDGTL
Sbjct: 396 TIELEPGTAPISRRPYRMPPKELAELKTQLQELLDKGFVRPSTSPWGCPALFVKKKDGTL 455
Query: 183 RLCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAF 362
RLC+DYR LN VT+KNKYPLPRID LFDQL GA+VFSKIDLRSGYHQ+KI DI KTAF
Sbjct: 456 RLCVDYRPLNAVTIKNKYPLPRIDLLFDQLSGAKVFSKIDLRSGYHQIKIKPEDIPKTAF 515
Query: 363 RTRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHL 542
TRYG YE+LVM FGLTNAPA FM LMN+VF P LDKFV+VFIDDILV+SK+ EEH QHL
Sbjct: 516 STRYGLYEYLVMSFGLTNAPAHFMYLMNSVFMPELDKFVVVFIDDILVFSKNEEEHAQHL 575
Query: 543 RIVLQNLARETVVCK 587
RIVL L + K
Sbjct: 576 RIVLNRLREHQLYAK 590
Score = 57.0 bits (136), Expect(2) = 8e-82
Identities = 27/40 (67%), Positives = 31/40 (77%)
Frame = +1
Query: 562 LREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQKIK 681
LRE QLYAK SKCEFWL +V FLGH +S GI+VD K+K
Sbjct: 582 LREHQLYAKFSKCEFWLKKVPFLGHILSEKGIEVDPGKVK 621
>gb|ABQ44355.1| polyprotein [Zea mays]
Length = 1476
Score = 272 bits (695), Expect(2) = 1e-81
Identities = 136/194 (70%), Positives = 148/194 (76%)
Frame = +3
Query: 6 IELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTLR 185
IELQPGT PIS PYRM P DKG+IRPS SPWG P LFVKKKD +LR
Sbjct: 535 IELQPGTAPISKRPYRMPPAELAELKKQLQELLDKGFIRPSTSPWGCPALFVKKKDESLR 594
Query: 186 LCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAFR 365
LCIDYR LN VT+KNKYPLPRID LFDQL GA+VFSKIDLRSGYHQ+KI +DI KTAF
Sbjct: 595 LCIDYRPLNAVTIKNKYPLPRIDVLFDQLVGAKVFSKIDLRSGYHQIKIRASDIPKTAFS 654
Query: 366 TRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHLR 545
TRYG YEFLVM FGLTNAPA FM LMN+VF P LDKFV+VFIDDILVYSK+ EEH +HL
Sbjct: 655 TRYGLYEFLVMSFGLTNAPAYFMYLMNSVFMPELDKFVVVFIDDILVYSKNEEEHAEHLH 714
Query: 546 IVLQNLARETVVCK 587
+VLQ L + K
Sbjct: 715 VVLQRLREHHLYAK 728
Score = 58.2 bits (139), Expect(2) = 1e-81
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +1
Query: 562 LREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQKIK 681
LRE LYAKLSKC+FWL ++ FLGH +S DGI VD K++
Sbjct: 720 LREHHLYAKLSKCDFWLKEIKFLGHTISQDGIAVDPDKVQ 759
>gb|AAD20658.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1611
Score = 275 bits (704), Expect(2) = 5e-81
Identities = 134/195 (68%), Positives = 153/195 (78%)
Frame = +3
Query: 3 TIELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTL 182
TIEL+PGTTPIS PYRMAP DKG+IRPS SPWGAPVLFVKKKDG+
Sbjct: 650 TIELEPGTTPISKAPYRMAPAEMAKLKKQLEELLDKGFIRPSSSPWGAPVLFVKKKDGSF 709
Query: 183 RLCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAF 362
RLCIDYR LN+VTVKNKYPLPRID+L DQL GA+ FSKIDL SGYHQ+ I TD+ KTAF
Sbjct: 710 RLCIDYRGLNKVTVKNKYPLPRIDELMDQLGGAQWFSKIDLASGYHQIPIEPTDVRKTAF 769
Query: 363 RTRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHL 542
RTRY H+EF+VMPFGLTNAPA FM +MN VFR +LD+FVI+FI+DILVYSKS E H++HL
Sbjct: 770 RTRYDHFEFVVMPFGLTNAPAAFMKMMNGVFRDFLDEFVIIFINDILVYSKSWEAHQEHL 829
Query: 543 RIVLQNLARETVVCK 587
R VL+ L + K
Sbjct: 830 RAVLERLREHELFAK 844
Score = 52.8 bits (125), Expect(2) = 5e-81
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +1
Query: 562 LREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQKIKA 684
LRE +L+AKLSKC FW V FLGH +S G+ VD +KI++
Sbjct: 836 LREHELFAKLSKCSFWQRSVGFLGHVISDQGVSVDPEKIRS 876
>gb|EOY00066.1| Retrotransposon protein [Theobroma cacao]
Length = 381
Score = 306 bits (783), Expect = 5e-81
Identities = 149/194 (76%), Positives = 161/194 (82%)
Frame = +3
Query: 6 IELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTLR 185
I+L PGT PISIPPY+MAP DKG+IRPS+SPWGAPVLFVKKKDGTLR
Sbjct: 75 IDLLPGTAPISIPPYKMAPAELKELKAQLQVLVDKGFIRPSISPWGAPVLFVKKKDGTLR 134
Query: 186 LCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAFR 365
LCIDYRQLNRVT+KNKYPLPRIDDLFDQL+GA VFSKIDLRSGY+QL+I E D+ KTAFR
Sbjct: 135 LCIDYRQLNRVTIKNKYPLPRIDDLFDQLRGAMVFSKIDLRSGYYQLRIKEQDVPKTAFR 194
Query: 366 TRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHLR 545
TRYGHYEFLVMPFGLTNAPAVFM LMN VF PYLDKFVIVFIDDILVYSK+ +EH HLR
Sbjct: 195 TRYGHYEFLVMPFGLTNAPAVFMDLMNRVFHPYLDKFVIVFIDDILVYSKNDDEHAAHLR 254
Query: 546 IVLQNLARETVVCK 587
IVLQ L + K
Sbjct: 255 IVLQTLRERQLYAK 268
Score = 67.8 bits (164), Expect = 3e-09
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +1
Query: 556 KTLREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQKIKA 684
+TLRE+QLYAK SKCEFWL +V+FLGH VSG GI VD +KI+A
Sbjct: 258 QTLRERQLYAKFSKCEFWLKEVVFLGHVVSGAGIYVDPKKIEA 300
>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
Length = 1771
Score = 265 bits (678), Expect(2) = 6e-81
Identities = 129/166 (77%), Positives = 138/166 (83%)
Frame = +3
Query: 6 IELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTLR 185
I+L+P T PISIPPYRMAP KG+IRPSVSPWGAPVLFVKKKDGT+R
Sbjct: 842 IDLEPDTRPISIPPYRMAPAELRELSAQLEDLLGKGFIRPSVSPWGAPVLFVKKKDGTMR 901
Query: 186 LCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAFR 365
+CIDYRQLN+VTVKN+YP+PRIDDLFDQLQGA VFSKIDLRSGYHQL+I DI KTAFR
Sbjct: 902 MCIDYRQLNKVTVKNRYPMPRIDDLFDQLQGAAVFSKIDLRSGYHQLRIRAADIPKTAFR 961
Query: 366 TRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDIL 503
TRYGHYEFLVM FGLTNAPA FM LM VFRPYLD FVIVFIDDIL
Sbjct: 962 TRYGHYEFLVMSFGLTNAPAAFMDLMTRVFRPYLDLFVIVFIDDIL 1007
Score = 62.4 bits (150), Expect(2) = 6e-81
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +1
Query: 559 TLREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQKIKA 684
TLR+++LYAK SKCEFWL+ V FLGH VS +GI+VD KI+A
Sbjct: 1008 TLRDQRLYAKFSKCEFWLESVAFLGHVVSKEGIRVDPAKIEA 1049
>gb|EOY26390.1| Uncharacterized protein TCM_027940 [Theobroma cacao]
Length = 1052
Score = 303 bits (776), Expect = 3e-80
Identities = 149/194 (76%), Positives = 160/194 (82%)
Frame = +3
Query: 6 IELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTLR 185
I+L P T PISIPPYRMAP DKG+IRPSVSPWGAPVLFVKKKDG+LR
Sbjct: 496 IDLIPDTRPISIPPYRMAPAELKELKDQLEDLLDKGFIRPSVSPWGAPVLFVKKKDGSLR 555
Query: 186 LCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAFR 365
LCIDYRQLN+VTVKNKYPLPRIDDLFDQLQGA+ FSKIDLRSGYHQL+I DI KTAFR
Sbjct: 556 LCIDYRQLNKVTVKNKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRIRNEDIPKTAFR 615
Query: 366 TRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHLR 545
TRYGHYEFLVM FGLTNAPA FM LMN VF+PYLDKFV+VFIDDIL+YSKS EEHEQHL+
Sbjct: 616 TRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDKFVVVFIDDILIYSKSREEHEQHLK 675
Query: 546 IVLQNLARETVVCK 587
IVLQ L + K
Sbjct: 676 IVLQILREHRLYAK 689
Score = 62.8 bits (151), Expect = 1e-07
Identities = 28/47 (59%), Positives = 38/47 (80%)
Frame = +1
Query: 544 ELCCKTLREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQKIKA 684
++ + LRE +LYAK SKCEFWL+ V FLGH VS +GI+VD++KI+A
Sbjct: 675 KIVLQILREHRLYAKFSKCEFWLESVAFLGHVVSKEGIRVDTKKIEA 721
>gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1447
Score = 303 bits (776), Expect = 3e-80
Identities = 149/194 (76%), Positives = 160/194 (82%)
Frame = +3
Query: 6 IELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTLR 185
I+L P T PISIPPYRMAP DKG+IRPSVSPWGAPVLFVKKKDG+LR
Sbjct: 538 IDLIPDTRPISIPPYRMAPAELKELKDQLEDLLDKGFIRPSVSPWGAPVLFVKKKDGSLR 597
Query: 186 LCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAFR 365
LCIDYRQLN+VTVKNKYPLPRIDDLFDQLQGA+ FSKIDLRSGYHQL+I DI KTAFR
Sbjct: 598 LCIDYRQLNKVTVKNKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRIRNEDIPKTAFR 657
Query: 366 TRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHLR 545
TRYGHYEFLVM FGLTNAPA FM LMN VF+PYLDKFV+VFIDDIL+YSKS EEHEQHL+
Sbjct: 658 TRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDKFVVVFIDDILIYSKSREEHEQHLK 717
Query: 546 IVLQNLARETVVCK 587
IVLQ L + K
Sbjct: 718 IVLQILREHRLYAK 731
Score = 62.8 bits (151), Expect = 1e-07
Identities = 28/47 (59%), Positives = 38/47 (80%)
Frame = +1
Query: 544 ELCCKTLREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQKIKA 684
++ + LRE +LYAK SKCEFWL+ V FLGH VS +GI+VD++KI+A
Sbjct: 717 KIVLQILREHRLYAKFSKCEFWLESVAFLGHVVSKEGIRVDTKKIEA 763
>emb|CAD39388.2| OSJNBb0016B03.9 [Oryza sativa Japonica Group]
Length = 1092
Score = 266 bits (681), Expect(2) = 4e-80
Identities = 131/194 (67%), Positives = 148/194 (76%)
Frame = +3
Query: 6 IELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTLR 185
I+L PGTTP+ PYRMA +KGYIRPS SPWGAPV+FV+KKD T R
Sbjct: 219 IDLAPGTTPLYKRPYRMAANELAEVKKQLEELKEKGYIRPSTSPWGAPVIFVEKKDKTKR 278
Query: 186 LCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAFR 365
+C+DYR LN VT+KNKYPLPRIDDLFDQL+GA VFSKIDLRSGYHQL+I E DI KTAF
Sbjct: 279 MCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFT 338
Query: 366 TRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHLR 545
TRYG YEF VM FGLTNAPA FM LMN VF YLDKFV+VFIDDIL+YS+S E+H+QHLR
Sbjct: 339 TRYGLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSQSEEDHQQHLR 398
Query: 546 IVLQNLARETVVCK 587
+VL L + K
Sbjct: 399 LVLGKLREHQLYAK 412
Score = 58.5 bits (140), Expect(2) = 4e-80
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +1
Query: 562 LREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQKIKA 684
LRE QLYAKLSKCEFWL +V FLGH +S G+ VD + + A
Sbjct: 404 LREHQLYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETVTA 444
>gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1515
Score = 302 bits (774), Expect = 6e-80
Identities = 146/194 (75%), Positives = 158/194 (81%)
Frame = +3
Query: 6 IELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTLR 185
I+L PGT PISIPPYRMAP DKG+IRPS+SPWGAP+LFVKKKDGTLR
Sbjct: 569 IDLLPGTAPISIPPYRMAPTELKELKVQLQELVDKGFIRPSISPWGAPILFVKKKDGTLR 628
Query: 186 LCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAFR 365
LCID RQLNR+T+KNKYPLPRIDDLFDQLQGA VFSK+DLRSGYHQL+I E D+ KTAFR
Sbjct: 629 LCIDCRQLNRMTIKNKYPLPRIDDLFDQLQGATVFSKVDLRSGYHQLRIKEQDVPKTAFR 688
Query: 366 TRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHLR 545
TRYGHYEFLVMPFGLTNAPA FM LMN VF PYLDKFVIVFIDDILVYS+ +EH HLR
Sbjct: 689 TRYGHYEFLVMPFGLTNAPAAFMDLMNRVFHPYLDKFVIVFIDDILVYSRDNDEHAAHLR 748
Query: 546 IVLQNLARETVVCK 587
IVLQ L + K
Sbjct: 749 IVLQTLRERQLYAK 762
Score = 64.7 bits (156), Expect = 3e-08
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = +1
Query: 556 KTLREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQKIKA 684
+TLRE+QLYAK SKCEFWL +V+FLGH VS GI VD +K++A
Sbjct: 752 QTLRERQLYAKFSKCEFWLQEVVFLGHIVSRTGIYVDPKKVEA 794
>gb|AAL77157.1|AC091732_8 Putative polyprotein [Oryza sativa Japonica Group]
gi|31431769|gb|AAP53495.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1839
Score = 265 bits (677), Expect(2) = 7e-80
Identities = 131/194 (67%), Positives = 147/194 (75%)
Frame = +3
Query: 6 IELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTLR 185
I+L PGTTP+ PYRMA +KGYIRPS SPWGAPV+FV+KKD T R
Sbjct: 894 IDLAPGTTPLYKRPYRMAANELAEVKKQLEELKEKGYIRPSTSPWGAPVIFVEKKDKTKR 953
Query: 186 LCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAFR 365
+CIDYR LN VT+KNKYPLPRIDDLFDQL+GA VFSKIDLRSGYHQL+I E DI KTAF
Sbjct: 954 MCIDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFT 1013
Query: 366 TRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHLR 545
TRYG YEF VM FGLTNAPA FM LMN VF YLDKFV+VFIDDIL+YS+S E+H+ HLR
Sbjct: 1014 TRYGLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSQSEEDHQHHLR 1073
Query: 546 IVLQNLARETVVCK 587
+VL L + K
Sbjct: 1074 LVLGKLREHQLYAK 1087
Score = 59.3 bits (142), Expect(2) = 7e-80
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +1
Query: 562 LREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQKIKA 684
LRE QLYAKLSKCEFWL +V FLGH +S G+ VD + + A
Sbjct: 1079 LREHQLYAKLSKCEFWLSEVTFLGHVISAKGVAVDPETVTA 1119
>gb|ABA98372.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1800
Score = 265 bits (677), Expect(2) = 7e-80
Identities = 130/194 (67%), Positives = 147/194 (75%)
Frame = +3
Query: 6 IELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTLR 185
I+L PGTTP+ PYRMA +KGYIRPS SPWGAPV+FV+KKD T R
Sbjct: 855 IDLAPGTTPLHKRPYRMAANELAEVKKQLEELKEKGYIRPSTSPWGAPVIFVEKKDKTKR 914
Query: 186 LCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAFR 365
+C+DYR LN VT+KNKYPLPRIDDLFDQL+GA VFSKIDLRSGYHQL+I E DI KTAF
Sbjct: 915 MCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFT 974
Query: 366 TRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHLR 545
TRYG YEF VM FGLTNAPA FM LMN VF YLDKFV+VFIDDIL+YS+S E+H+ HLR
Sbjct: 975 TRYGLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSQSEEDHQHHLR 1034
Query: 546 IVLQNLARETVVCK 587
+VL L + K
Sbjct: 1035 LVLGKLREHQLYAK 1048
Score = 59.3 bits (142), Expect(2) = 7e-80
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +1
Query: 562 LREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQKIKA 684
LRE QLYAKLSKCEFWL +V FLGH +S G+ VD + + A
Sbjct: 1040 LREHQLYAKLSKCEFWLSEVTFLGHVISAKGVAVDPETVTA 1080
>gb|ABA97793.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1435
Score = 265 bits (678), Expect(2) = 9e-80
Identities = 130/194 (67%), Positives = 148/194 (76%)
Frame = +3
Query: 6 IELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTLR 185
I+L PGTTP+ PYRMA +KGYIRPS SPWGAPV+FV+KKD T R
Sbjct: 561 IDLAPGTTPLYKRPYRMAANELAEVKKQLEELKEKGYIRPSTSPWGAPVIFVEKKDKTKR 620
Query: 186 LCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAFR 365
+C+DYR LN VT+KNKYPLPRIDDLFDQL+GA VFSKIDLRSGYHQL+I E DI+KTAF
Sbjct: 621 MCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIAKTAFT 680
Query: 366 TRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHLR 545
TRYG YEF VM FGLTNAPA FM LMN VF YLDKFV+VFIDDIL+YS+S E+H+ HLR
Sbjct: 681 TRYGLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSQSEEDHQHHLR 740
Query: 546 IVLQNLARETVVCK 587
+VL L + K
Sbjct: 741 LVLGKLREHQLYAK 754
Score = 58.5 bits (140), Expect(2) = 9e-80
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +1
Query: 562 LREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQKIKA 684
LRE QLYAKLSKCEFWL +V FLGH +S G+ VD + + A
Sbjct: 746 LREHQLYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETVTA 786
>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1053
Score = 264 bits (674), Expect(2) = 9e-80
Identities = 130/194 (67%), Positives = 145/194 (74%)
Frame = +3
Query: 6 IELQPGTTPISIPPYRMAPVXXXXXXXXXXXXXDKGYIRPSVSPWGAPVLFVKKKDGTLR 185
I+L PGT PIS PYRM KGYIRPS SPWGAPVLFVKKKD ++R
Sbjct: 116 IDLVPGTAPISKRPYRMPANELAEMKKQIMELKQKGYIRPSSSPWGAPVLFVKKKDNSMR 175
Query: 186 LCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGARVFSKIDLRSGYHQLKIAETDISKTAFR 365
+C+DYR LN VT+KNKYPLPRIDDLFDQL+GA VFSKIDLRSGYHQLKI DI KTAF
Sbjct: 176 MCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGASVFSKIDLRSGYHQLKIRPEDIPKTAFT 235
Query: 366 TRYGHYEFLVMPFGLTNAPAVFMALMNNVFRPYLDKFVIVFIDDILVYSKSAEEHEQHLR 545
TRYG YEF VM FGLTNAPA FM +MN VF +LDKFV+VFIDDIL+YSK+ +EHE HLR
Sbjct: 236 TRYGLYEFTVMSFGLTNAPAYFMNMMNKVFMEFLDKFVVVFIDDILIYSKNEDEHEDHLR 295
Query: 546 IVLQNLARETVVCK 587
I+L L + K
Sbjct: 296 IILGKLRENQLYAK 309
Score = 60.1 bits (144), Expect(2) = 9e-80
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +1
Query: 562 LREKQLYAKLSKCEFWLDQVIFLGHGVSGDGIKVDSQKIKA 684
LRE QLYAK +KCEFWL QV FLGH VS G+ VD K++A
Sbjct: 301 LRENQLYAKFNKCEFWLSQVAFLGHIVSAGGVAVDPAKVEA 341