BLASTX nr result
ID: Rehmannia22_contig00019197
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00019197
(648 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB80870.1| DNA-directed RNA polymerases I, II, and III subun... 130 3e-28
gb|EMJ09140.1| hypothetical protein PRUPE_ppa017455mg, partial [... 129 1e-27
ref|XP_006354580.1| PREDICTED: DNA-directed RNA polymerases II, ... 127 4e-27
ref|XP_004229520.1| PREDICTED: probable DNA-directed RNA polymer... 126 6e-27
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ... 125 8e-27
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ... 125 1e-26
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I... 124 2e-26
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I... 124 3e-26
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ... 123 4e-26
ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, I... 123 4e-26
ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group] g... 122 7e-26
gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indi... 122 7e-26
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s... 122 1e-25
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi... 122 1e-25
gb|AAK12101.1|AF323605_1 RNA polymerase I, II and III subunit RP... 121 2e-25
ref|XP_002438937.1| hypothetical protein SORBIDRAFT_10g028590 [S... 121 2e-25
ref|XP_006305757.1| hypothetical protein CARUB_v10010575mg [Caps... 120 3e-25
ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymer... 120 3e-25
ref|XP_006397103.1| hypothetical protein EUTSA_v10029046mg [Eutr... 120 5e-25
ref|NP_175827.1| DNA-directed RNA polymerases II and V subunit 8... 120 5e-25
>gb|EXB80870.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3 [Morus
notabilis]
Length = 152
Score = 130 bits (327), Expect = 3e-28
Identities = 63/118 (53%), Positives = 86/118 (72%)
Frame = +1
Query: 25 LELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKM 204
+ LDV+TE+YPM G+ F M++S TLN +G VA Y + +QKSLADKFEY+MHGLLYK+
Sbjct: 39 MHLDVNTEIYPMKEGDRFVMVLSPTLNWNGVPVADYHKQAEQKSLADKFEYIMHGLLYKL 98
Query: 205 AEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI*HEYLS 378
E D KV +Y+SFGGLQ+ML GDP + KFK DQK+FLL+RK+ +++++
Sbjct: 99 TE-----EGSGSDFKVGIYVSFGGLQMMLNGDPAQCTKFKHDQKMFLLIRKVSNDFVT 151
>gb|EMJ09140.1| hypothetical protein PRUPE_ppa017455mg, partial [Prunus persica]
Length = 170
Score = 129 bits (323), Expect = 1e-27
Identities = 67/119 (56%), Positives = 84/119 (70%), Gaps = 7/119 (5%)
Frame = +1
Query: 25 LELDVHTELYPMLPGENFRMLISTTLNMDGSAVAG-------YFPEGKQKSLADKFEYVM 183
L LDV+TE+YPM + F M++S TLN G+ VAG Y E +QKSLADKF+Y+M
Sbjct: 51 LTLDVNTEIYPMHEKDKFLMVLSPTLNWSGAPVAGKQGQVLYYTFEVEQKSLADKFDYIM 110
Query: 184 HGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 360
HGLLYKM+ K K+ + VKV VY SFGGLQ+MLKGDP KFK+DQ +FLL+RK+
Sbjct: 111 HGLLYKMSTEKGKSEYSKEGVKVEVYASFGGLQMMLKGDPTNCTKFKIDQNMFLLIRKL 169
>ref|XP_006354580.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like isoform X1 [Solanum tuberosum]
gi|565376162|ref|XP_006354581.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X2
[Solanum tuberosum]
Length = 144
Score = 127 bits (318), Expect = 4e-27
Identities = 70/120 (58%), Positives = 88/120 (73%)
Frame = +1
Query: 1 KGEDDDCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYV 180
+ D ++LD+++ELYPM E +RM+ISTTL M+GSAV Y PEGK SL DKFEY+
Sbjct: 31 ESSDGASSIQLDINSELYPMKRKELYRMVISTTL-MEGSAVTSYPPEGK--SLLDKFEYI 87
Query: 181 MHGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 360
+HGL+YK++ D KVVVY+SFGGLQLMLK D LK+ KFK+DQKLFLLLRK+
Sbjct: 88 VHGLVYKVS-----MEGSGADKKVVVYVSFGGLQLMLKSDALKVQKFKLDQKLFLLLRKM 142
>ref|XP_004229520.1| PREDICTED: probable DNA-directed RNA polymerases I, II, and III
subunit RPABC3-like [Solanum lycopersicum]
Length = 144
Score = 126 bits (316), Expect = 6e-27
Identities = 70/120 (58%), Positives = 87/120 (72%)
Frame = +1
Query: 1 KGEDDDCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYV 180
+ D ++LD+++ELYPM E +RM+ISTTL M+GSAV Y PEGK SL DKFEY+
Sbjct: 31 ESSDGATSIQLDINSELYPMKRKELYRMVISTTL-MEGSAVTSYPPEGK--SLLDKFEYI 87
Query: 181 MHGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 360
+HGL+YK++ D KVVVY+SFGGLQLMLK D LK KFK+DQKLFLLLRK+
Sbjct: 88 VHGLVYKVS-----MEGSGADKKVVVYVSFGGLQLMLKSDALKTQKFKLDQKLFLLLRKM 142
>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Oryza brachyantha]
Length = 147
Score = 125 bits (315), Expect = 8e-27
Identities = 60/120 (50%), Positives = 87/120 (72%)
Frame = +1
Query: 1 KGEDDDCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYV 180
+ E + Y++LDV T++YPM PG+ F M++ TLN+DG+ G+F + +K+LADK+EYV
Sbjct: 31 RNEQLNVYMQLDVATDVYPMHPGDKFTMVLVPTLNLDGTPDTGFFTQAGRKTLADKYEYV 90
Query: 181 MHGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 360
MHG LYK++E KE + + KV +Y SFGGL +MLKGDP F++DQ+LFLL+RK+
Sbjct: 91 MHGKLYKISEDKETS---GQNAKVEMYASFGGLLMMLKGDPSSAANFELDQRLFLLMRKV 147
>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like isoform X1 [Oryza brachyantha]
gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X2
[Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X3 [Oryza brachyantha]
gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X4
[Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X5 [Oryza brachyantha]
Length = 146
Score = 125 bits (313), Expect = 1e-26
Identities = 59/120 (49%), Positives = 85/120 (70%)
Frame = +1
Query: 1 KGEDDDCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYV 180
+ E D Y++LDV TE+YPM PG+ F M+++ TLN+DG+ G++ + +K+LADK++YV
Sbjct: 31 RSEQFDMYMQLDVATEVYPMRPGDKFTMVLAPTLNLDGTPDIGFYTQAGRKTLADKYDYV 90
Query: 181 MHGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 360
MHG LYK++E G KV +Y SFGGL +MLKGDP F++DQ+LFLL+RK+
Sbjct: 91 MHGKLYKISE----DGSGGQATKVEIYASFGGLLMMLKGDPSTAANFELDQRLFLLIRKV 146
>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3 isoform 1 [Vitis vinifera]
gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3 isoform 2
[Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
protein product [Vitis vinifera]
Length = 145
Score = 124 bits (312), Expect = 2e-26
Identities = 60/120 (50%), Positives = 85/120 (70%)
Frame = +1
Query: 1 KGEDDDCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYV 180
+ E D Y++LDV+TE+YPM GE F M +++TL++DG+ GY+ + +KSLADKFEYV
Sbjct: 31 QSEQLDMYMQLDVNTEIYPMHAGEKFAMSLASTLDLDGTPDTGYYTQAGRKSLADKFEYV 90
Query: 181 MHGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 360
MHG LYK++E +VK V+Y+SFGGL +ML GDP K +DQ++FLL+RK+
Sbjct: 91 MHGKLYKISE-----EGSGPNVKGVIYVSFGGLLMMLSGDPANTAKLDLDQRVFLLIRKV 145
>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like isoform 1 [Solanum lycopersicum]
gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3-like
isoform 2 [Solanum lycopersicum]
Length = 145
Score = 124 bits (310), Expect = 3e-26
Identities = 59/120 (49%), Positives = 86/120 (71%)
Frame = +1
Query: 1 KGEDDDCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYV 180
+ E D ++ LDV+TE+YPM + F M++++TLN+DG+ GYF +G +KSLADKFEYV
Sbjct: 31 RSEQFDMFMLLDVNTEIYPMRVKDKFMMVLASTLNLDGTPDTGYFIQGNKKSLADKFEYV 90
Query: 181 MHGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 360
MHG LY+++E H VK +++SFGGL + L+GDP KF++DQK+FLL+RK+
Sbjct: 91 MHGKLYRISEEGSGKH-----VKADIFVSFGGLLMQLRGDPSIAAKFELDQKIFLLIRKV 145
>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Solanum tuberosum]
Length = 145
Score = 123 bits (309), Expect = 4e-26
Identities = 58/120 (48%), Positives = 86/120 (71%)
Frame = +1
Query: 1 KGEDDDCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYV 180
+ E D ++ LD++TE+YPM + F M++++TLN+DG+ GYF +G +KSLADKFEYV
Sbjct: 31 RSEQFDMFMLLDINTEIYPMRVKDKFMMVLASTLNLDGTPDTGYFIQGNKKSLADKFEYV 90
Query: 181 MHGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 360
MHG LY+++E H VK +++SFGGL + L+GDP KF++DQK+FLL+RK+
Sbjct: 91 MHGKLYRISEEGSGKH-----VKADIFVSFGGLLMQLRGDPSIAAKFELDQKIFLLIRKV 145
>ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC3 [Vitis vinifera] gi|296084254|emb|CBI24642.3|
unnamed protein product [Vitis vinifera]
Length = 145
Score = 123 bits (309), Expect = 4e-26
Identities = 57/118 (48%), Positives = 88/118 (74%)
Frame = +1
Query: 7 EDDDCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYVMH 186
E D +++LDV+ E YP+ GE FRM+++ TL++DG+ V YF +G+QKSLADKF+YVM+
Sbjct: 33 EQYDMFMQLDVNIEAYPIQAGEKFRMVLAPTLHLDGADVTDYFTQGEQKSLADKFDYVMY 92
Query: 187 GLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 360
G++YK++ DVK V+Y SFGGL ++LKGDP ++K +V+++LFLL++K+
Sbjct: 93 GIIYKVS-----NEGSGPDVKGVIYASFGGLLMILKGDPSNLNKLEVNKRLFLLMKKV 145
>ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group]
gi|29244685|gb|AAO73277.1| putative RNA polymerase
[Oryza sativa Japonica Group] gi|41469638|gb|AAS07361.1|
putative RNA polymerase [Oryza sativa Japonica Group]
gi|108712076|gb|ABF99871.1| RNA polymerase Rpb8 family
protein, expressed [Oryza sativa Japonica Group]
gi|108712077|gb|ABF99872.1| RNA polymerase Rpb8 family
protein, expressed [Oryza sativa Japonica Group]
gi|113550351|dbj|BAF13794.1| Os03g0845700 [Oryza sativa
Japonica Group] gi|125588624|gb|EAZ29288.1| hypothetical
protein OsJ_13351 [Oryza sativa Japonica Group]
gi|215692970|dbj|BAG88390.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 148
Score = 122 bits (307), Expect = 7e-26
Identities = 58/120 (48%), Positives = 87/120 (72%)
Frame = +1
Query: 1 KGEDDDCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYV 180
+ + D Y++LDV T++YPM PG+ F M++ TLN+DG+ + +F + +K+LADK+EYV
Sbjct: 31 RSDQFDMYMQLDVATDVYPMHPGDRFTMVLVPTLNLDGTPDSAFFTQAGRKTLADKYEYV 90
Query: 181 MHGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 360
MHG LYK++E K+ + + KV +Y SFGGL +MLKGDP F++DQ+LFLL+RK+
Sbjct: 91 MHGKLYKISEDKDTS--DQNAKKVEMYASFGGLLVMLKGDPSSAANFELDQRLFLLMRKV 148
>gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indica Group]
Length = 215
Score = 122 bits (307), Expect = 7e-26
Identities = 58/120 (48%), Positives = 87/120 (72%)
Frame = +1
Query: 1 KGEDDDCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYV 180
+ + D Y++LDV T++YPM PG+ F M++ TLN+DG+ + +F + +K+LADK+EYV
Sbjct: 98 RSDQFDMYMQLDVATDVYPMHPGDRFTMVLVPTLNLDGTPDSAFFTQAGRKTLADKYEYV 157
Query: 181 MHGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 360
MHG LYK++E K+ + + KV +Y SFGGL +MLKGDP F++DQ+LFLL+RK+
Sbjct: 158 MHGKLYKISEDKDTS--DQNAKKVEMYASFGGLLVMLKGDPSSAANFELDQRLFLLMRKV 215
>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
sativa Japonica Group]
Length = 396
Score = 122 bits (305), Expect = 1e-25
Identities = 58/120 (48%), Positives = 83/120 (69%)
Frame = +1
Query: 1 KGEDDDCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYV 180
+ E D Y++LDV TE+YPM G+ F M+++ TLN+DG+ G++ + +K+LADKF+YV
Sbjct: 281 RSEQFDMYMQLDVATEVYPMRAGDRFTMVLAPTLNLDGTPDTGFYTQAGRKTLADKFDYV 340
Query: 181 MHGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 360
MHG LYK++E KV +Y SFGGL +MLKGDP F++DQ+LFLL+RK+
Sbjct: 341 MHGKLYKISE----DSSSGQATKVEIYASFGGLLMMLKGDPSSAASFELDQRLFLLIRKV 396
>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
gi|125598367|gb|EAZ38147.1| hypothetical protein
OsJ_22498 [Oryza sativa Japonica Group]
Length = 191
Score = 122 bits (305), Expect = 1e-25
Identities = 58/120 (48%), Positives = 83/120 (69%)
Frame = +1
Query: 1 KGEDDDCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYV 180
+ E D Y++LDV TE+YPM G+ F M+++ TLN+DG+ G++ + +K+LADKF+YV
Sbjct: 76 RSEQFDMYMQLDVATEVYPMRAGDRFTMVLAPTLNLDGTPDTGFYTQAGRKTLADKFDYV 135
Query: 181 MHGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 360
MHG LYK++E KV +Y SFGGL +MLKGDP F++DQ+LFLL+RK+
Sbjct: 136 MHGKLYKISE----DSSSGQATKVEIYASFGGLLMMLKGDPSSAASFELDQRLFLLIRKV 191
>gb|AAK12101.1|AF323605_1 RNA polymerase I, II and III subunit RPB8, partial [Manihot
esculenta]
Length = 110
Score = 121 bits (304), Expect = 2e-25
Identities = 56/115 (48%), Positives = 83/115 (72%)
Frame = +1
Query: 16 DCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLL 195
D ++ LDV+TE+YPM G+ F M ++ TLN+DG+ GY+ +G +K+LADK+EY+MHG L
Sbjct: 1 DMFMHLDVNTEIYPMAVGDKFTMALAHTLNLDGTPDTGYYIQGARKTLADKYEYIMHGKL 60
Query: 196 YKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 360
YK++E VK +Y+S+GGL +MLKGDP + F++DQ+LFLL+RK+
Sbjct: 61 YKISE-----EGSGKAVKAEIYVSYGGLLMMLKGDPSHVSHFELDQRLFLLIRKL 110
>ref|XP_002438937.1| hypothetical protein SORBIDRAFT_10g028590 [Sorghum bicolor]
gi|241917160|gb|EER90304.1| hypothetical protein
SORBIDRAFT_10g028590 [Sorghum bicolor]
Length = 149
Score = 121 bits (304), Expect = 2e-25
Identities = 54/116 (46%), Positives = 85/116 (73%)
Frame = +1
Query: 10 DDDCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYVMHG 189
+++ Y++LDV TE+Y M G+ F M+++ TLN+DGS AGY+ + +K+LAD ++Y+MHG
Sbjct: 33 ENEMYMQLDVATEVYAMKLGDTFNMVLALTLNLDGSTDAGYYTQAGRKTLADDYDYIMHG 92
Query: 190 LLYKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRK 357
LYK++E K +G+ KV +Y SFGGL ++L+GDP F++DQ+LFLL++K
Sbjct: 93 KLYKISEDSTKDSNGNSSTKVEIYASFGGLLMILRGDPSCAAGFQLDQRLFLLIKK 148
>ref|XP_006305757.1| hypothetical protein CARUB_v10010575mg [Capsella rubella]
gi|482574468|gb|EOA38655.1| hypothetical protein
CARUB_v10010575mg [Capsella rubella]
Length = 146
Score = 120 bits (302), Expect = 3e-25
Identities = 56/115 (48%), Positives = 83/115 (72%)
Frame = +1
Query: 16 DCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLL 195
+ ++ LDV+TE+YPM G+ F + ++ TLN+DG+ GYF G +K+LADK+EY+MHG L
Sbjct: 38 EMFMHLDVNTEVYPMAVGDKFTLAMAPTLNLDGTPDTGYFTPGAKKTLADKYEYIMHGKL 97
Query: 196 YKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 360
YK++E KT K +Y+SFGGL ++LKGDP + F++DQ+LFLL+RK+
Sbjct: 98 YKISERDGKT------PKAELYVSFGGLLMLLKGDPAHISHFELDQRLFLLMRKL 146
>ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymerases I, II, and III
subunit RPABC3-like [Cucumis sativus]
gi|449509097|ref|XP_004163492.1| PREDICTED: probable
DNA-directed RNA polymerases I, II, and III subunit
RPABC3-like [Cucumis sativus]
Length = 146
Score = 120 bits (302), Expect = 3e-25
Identities = 61/120 (50%), Positives = 82/120 (68%)
Frame = +1
Query: 1 KGEDDDCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYV 180
+ E ++ LDV+TE+YP+ GE M++S TLN DGS V Y + +KSLADKFEY+
Sbjct: 31 RSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYI 90
Query: 181 MHGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 360
MHG YK+++ D+KV VY SFGGLQ++LKGDP+ KF+VDQ +FLLLRK+
Sbjct: 91 MHGKTYKLSD-----EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKL 145
>ref|XP_006397103.1| hypothetical protein EUTSA_v10029046mg [Eutrema salsugineum]
gi|557098120|gb|ESQ38556.1| hypothetical protein
EUTSA_v10029046mg [Eutrema salsugineum]
Length = 146
Score = 120 bits (300), Expect = 5e-25
Identities = 56/115 (48%), Positives = 82/115 (71%)
Frame = +1
Query: 16 DCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLL 195
+ ++ LDV+TE+YPM G+ F M ++ TLN+DG+ GYF G +K+LADK+EY+MHG L
Sbjct: 38 EMFMHLDVNTEVYPMAVGDKFTMAMAPTLNLDGTPDTGYFTPGAKKTLADKYEYIMHGKL 97
Query: 196 YKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 360
YK+ E KT K +Y+SFGGL ++L+GDP + F++DQ+LFLL+RK+
Sbjct: 98 YKITERDGKT------PKAELYVSFGGLLMLLQGDPAHISHFELDQRLFLLMRKL 146
>ref|NP_175827.1| DNA-directed RNA polymerases II and V subunit 8A [Arabidopsis
thaliana] gi|75100070|sp|O81097.1|RPB8A_ARATH RecName:
Full=DNA-directed RNA polymerases II and V subunit 8A;
AltName: Full=RNA polymerase I, II and III 16.5 kDa
subunit; Short=AtRPABC16.5
gi|4585968|gb|AAD25604.1|AC005287_6 RNA polymerase I, II
and III 16.5 kDa subunit [Arabidopsis thaliana]
gi|3372230|gb|AAC28252.1| RNA polymerase I, II and III
16.5 kDa subunit [Arabidopsis thaliana]
gi|21555812|gb|AAM63939.1| RNA polymerase II subunit,
putative [Arabidopsis thaliana]
gi|28466897|gb|AAO44057.1| At1g54250 [Arabidopsis
thaliana] gi|110735704|dbj|BAE99832.1| RNA polymerase I,
II and III 16.5 kDa subunit [Arabidopsis thaliana]
gi|332194950|gb|AEE33071.1| RNA polymerase Rpb8
[Arabidopsis thaliana]
Length = 146
Score = 120 bits (300), Expect = 5e-25
Identities = 55/115 (47%), Positives = 83/115 (72%)
Frame = +1
Query: 16 DCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLL 195
+ ++ LDV+TE+YP+ G+ F + ++ TLN+DG+ GYF G +K+LADK+EY+MHG L
Sbjct: 38 EMFMHLDVNTEVYPLAVGDKFTLALAPTLNLDGTPDTGYFTPGAKKTLADKYEYIMHGKL 97
Query: 196 YKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 360
YK++E KT K +Y+SFGGL ++LKGDP + F++DQ+LFLL+RK+
Sbjct: 98 YKISERDGKT------PKAELYVSFGGLLMLLKGDPAHISHFELDQRLFLLMRKL 146